View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3060_low_1 (Length: 1166)

Name: NF3060_low_1
Description: NF3060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3060_low_1
NF3060_low_1
[»] chr2 (31 HSPs)
chr2 (1-935)||(32706167-32707096)
chr2 (133-210)||(32718574-32718651)
chr2 (133-210)||(32724979-32725056)
chr2 (2-55)||(32718419-32718472)
chr2 (2-55)||(32724824-32724877)
chr2 (311-364)||(12734929-12734982)
chr2 (332-364)||(14530530-14530562)
chr2 (320-364)||(28960211-28960255)
chr2 (561-613)||(32749254-32749306)
chr2 (334-364)||(8197541-8197571)
chr2 (334-364)||(8202301-8202331)
chr2 (311-365)||(12474926-12474980)
chr2 (311-364)||(227418-227471)
chr2 (311-364)||(1404161-1404214)
chr2 (332-365)||(2073306-2073339)
chr2 (311-364)||(3635323-3635376)
chr2 (311-364)||(4807824-4807877)
chr2 (311-364)||(9531600-9531653)
chr2 (311-364)||(9556369-9556422)
chr2 (311-364)||(12520062-12520115)
chr2 (324-365)||(13474213-13474254)
chr2 (311-364)||(17670697-17670750)
chr2 (311-364)||(25834907-25834960)
chr2 (311-364)||(28508907-28508960)
chr2 (311-364)||(30306261-30306314)
chr2 (332-361)||(35715856-35715885)
chr2 (311-364)||(38328370-38328423)
chr2 (311-364)||(38435181-38435234)
chr2 (332-365)||(38452685-38452718)
chr2 (311-364)||(41763043-41763096)
chr2 (311-364)||(43573130-43573183)
[»] chr5 (18 HSPs)
chr5 (656-1051)||(3001615-3002011)
chr5 (275-522)||(3000932-3001177)
chr5 (131-215)||(2999658-2999748)
chr5 (563-637)||(3001217-3001291)
chr5 (1067-1136)||(16895055-16895126)
chr5 (168-215)||(7432420-7432467)
chr5 (231-277)||(3000803-3000849)
chr5 (311-364)||(12492384-12492437)
chr5 (311-365)||(3302073-3302127)
chr5 (311-364)||(408494-408547)
chr5 (311-364)||(4496613-4496666)
chr5 (332-365)||(10124387-10124420)
chr5 (332-365)||(10989084-10989117)
chr5 (311-364)||(14665941-14665994)
chr5 (332-365)||(16913881-16913914)
chr5 (311-364)||(28976859-28976912)
chr5 (311-364)||(29816611-29816664)
chr5 (332-365)||(32489296-32489329)
[»] chr6 (10 HSPs)
chr6 (131-215)||(14903439-14903523)
chr6 (311-364)||(579647-579700)
chr6 (311-365)||(5096063-5096117)
chr6 (311-365)||(9706999-9707053)
chr6 (311-365)||(34934829-34934883)
chr6 (311-364)||(12890804-12890857)
chr6 (311-364)||(28085605-28085658)
chr6 (311-364)||(31819060-31819113)
chr6 (311-364)||(34143765-34143818)
chr6 (311-364)||(34156381-34156434)
[»] chr3 (19 HSPs)
chr3 (320-365)||(48712074-48712119)
chr3 (311-364)||(25191606-25191659)
chr3 (309-364)||(52139027-52139082)
chr3 (311-365)||(31566160-31566214)
chr3 (311-365)||(40106619-40106673)
chr3 (311-364)||(22301-22354)
chr3 (311-364)||(311309-311362)
chr3 (311-364)||(2133612-2133665)
chr3 (311-364)||(5169061-5169114)
chr3 (311-364)||(12096705-12096758)
chr3 (332-365)||(15296157-15296190)
chr3 (332-365)||(27192473-27192506)
chr3 (311-364)||(31146928-31146981)
chr3 (332-365)||(43396081-43396114)
chr3 (332-365)||(45289090-45289123)
chr3 (332-365)||(45933375-45933408)
chr3 (311-364)||(48508464-48508517)
chr3 (311-364)||(53262370-53262423)
chr3 (311-364)||(54128608-54128661)
[»] scaffold0041 (1 HSPs)
scaffold0041 (311-365)||(16807-16861)
[»] chr4 (17 HSPs)
chr4 (311-364)||(6957827-6957880)
chr4 (311-364)||(43434153-43434206)
chr4 (320-364)||(32339797-32339841)
chr4 (311-364)||(436458-436511)
chr4 (334-363)||(4548274-4548303)
chr4 (311-364)||(21528517-21528570)
chr4 (332-365)||(23906296-23906329)
chr4 (311-364)||(30634106-30634159)
chr4 (311-364)||(31959814-31959867)
chr4 (332-365)||(38789622-38789655)
chr4 (332-365)||(48622542-48622575)
chr4 (332-365)||(49416957-49416990)
chr4 (311-364)||(50238615-50238668)
chr4 (311-364)||(50238701-50238754)
chr4 (332-365)||(50471777-50471810)
chr4 (311-364)||(52569515-52569568)
chr4 (311-364)||(55007975-55008028)
[»] chr1 (25 HSPs)
chr1 (311-364)||(3777260-3777313)
chr1 (311-364)||(6025834-6025887)
chr1 (332-364)||(22930643-22930675)
chr1 (332-364)||(31274401-31274433)
chr1 (332-364)||(43898459-43898491)
chr1 (331-365)||(36339803-36339837)
chr1 (311-361)||(39140744-39140794)
chr1 (311-365)||(49347392-49347446)
chr1 (311-365)||(52921309-52921363)
chr1 (311-364)||(696499-696552)
chr1 (311-364)||(1210974-1211027)
chr1 (311-364)||(25979231-25979284)
chr1 (311-364)||(29577481-29577534)
chr1 (332-365)||(29975449-29975482)
chr1 (311-364)||(30202130-30202183)
chr1 (311-364)||(32079177-32079230)
chr1 (311-364)||(34444585-34444638)
chr1 (332-365)||(40568409-40568442)
chr1 (311-364)||(41560458-41560511)
chr1 (332-365)||(42337806-42337839)
chr1 (332-365)||(43028807-43028840)
chr1 (311-364)||(43481798-43481851)
chr1 (311-364)||(44941776-44941829)
chr1 (311-364)||(50636310-50636363)
chr1 (311-364)||(50846791-50846844)
[»] chr8 (15 HSPs)
chr8 (332-364)||(35643608-35643640)
chr8 (169-213)||(39851723-39851767)
chr8 (311-365)||(44529454-44529508)
chr8 (311-365)||(45419464-45419518)
chr8 (332-361)||(1313814-1313843)
chr8 (311-364)||(1928587-1928640)
chr8 (311-372)||(4955420-4955481)
chr8 (311-364)||(10668497-10668550)
chr8 (311-364)||(11523723-11523776)
chr8 (320-365)||(12611735-12611780)
chr8 (311-364)||(14742082-14742135)
chr8 (311-364)||(25473403-25473456)
chr8 (336-365)||(29520903-29520932)
chr8 (311-364)||(32276914-32276967)
chr8 (311-364)||(36545378-36545431)
[»] chr7 (22 HSPs)
chr7 (320-364)||(12966254-12966298)
chr7 (311-365)||(33732061-33732115)
chr7 (311-361)||(40149016-40149066)
chr7 (311-365)||(40979927-40979981)
chr7 (311-365)||(48919341-48919395)
chr7 (311-364)||(1011275-1011328)
chr7 (311-364)||(2885722-2885775)
chr7 (311-364)||(5418303-5418356)
chr7 (311-364)||(11594189-11594242)
chr7 (311-364)||(12841275-12841328)
chr7 (311-364)||(22349849-22349902)
chr7 (311-364)||(27649009-27649062)
chr7 (311-364)||(28208328-28208381)
chr7 (311-364)||(29650613-29650666)
chr7 (311-364)||(31005434-31005487)
chr7 (311-364)||(31682602-31682655)
chr7 (311-364)||(31869102-31869155)
chr7 (311-364)||(32631793-32631846)
chr7 (311-364)||(33073158-33073211)
chr7 (311-364)||(36101777-36101830)
chr7 (311-364)||(37618174-37618227)
chr7 (311-364)||(39906372-39906425)
[»] scaffold0168 (1 HSPs)
scaffold0168 (311-364)||(28889-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (311-364)||(31697-31750)


Alignment Details
Target: chr2 (Bit Score: 878; Significance: 0; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 878; E-Value: 0
Query Start/End: Original strand, 1 - 935
Target Start/End: Original strand, 32706167 - 32707096
Alignment:
Q  1 atctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttagctcattgcaagatagtttaagattgtcggtgtttaatgttttacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  32706167 atctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttagctcattgcatgatagtttaagattgtcggtgtttaatgttt-acc 32706265  T
Q  101 tacatatcaatcattgagtgagtggtattcttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706266 tacatatcaatcattgagtgagtggtattcttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatat 32706365  T
Q  201 ttaaatcattgaatagaagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgctttgtgggtggtgagttgcgtgttgtagtg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  32706366 ttaaatcattgaatagaagaagagaagcgtgtttccaacactagttatacaagaagagaagcgtgttcgctttgtgg----tgagttgcgtgttgtagtg 32706461  T
Q  301 tttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaatattattttagttgtgttggcctgtttt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706462 tttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaatattattttagttgtgttggcctgtttt 32706561  T
Q  401 gattggcaagatttttccttttgtttattaatatgctttcattttagctgaatatctgctatggctgctaggatataggcttataggatgaattatgtgc 500  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706562 gatatgcaagatttttccttttgtttattaatatgctttcattttagctgaatatctgctatggctgctaggatataggcttataggatgaattatgtgc 32706661  T
Q  501 agtcatgattagtcaattttctatagctcagtggatattagctccttcctctttattatatttggatttctttgtttgtagagattgaaaattgttactg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706662 agtcatgattagtcaattttctatagctcagtggatattagctccttcctctttattatatttggatttctttgtttgtagagattgaaaattgttactg 32706761  T
Q  601 cgctgttttcactattactttttcctatatcagaatgcgtcgatttcaggtaacgacgattacaaattctactttccaagacacaggtatagcagctata 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32706762 cgctgttttcactattactttttcctatatcagaatgcgtcgatttcagctaacgacgattacaaattctactttccaagacacaggcatagcagctata 32706861  T
Q  701 ggcgtggagcatcaatttcacttccaaatatcccagatatccctttaagcatggtgttgcctcattttggaaaatgaagtgctgtttttaagattctcaa 800  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706862 ggcgtggtgcatcaatttcacttccaaatatcccagatatccctttaagcatggtgttgcctcattttggaaaatgaagtgctgtttttaagattctcaa 32706961  T
Q  801 tacgtaagctactgcagttttttgtgcaatgtctaaattgtgccgctacggaaatattttactagcatgcgttggttatgaatatgaatataatgtgctt 900  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706962 tacgtaagctactgcagttttttgtgcaatgtctaaattgtgccgctacggaaatattttactagcatgcgttggttatgaatatgaatataatgtgctt 32707061  T
Q  901 tgacatctgctgctgtacaatataatgattgatat 935  Q
    | ||||||||||||| |||||||||||||||||||    
T  32707062 ttacatctgctgctgcacaatataatgattgatat 32707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 32718574 - 32718651
Alignment:
Q  133 gtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 210  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32718574 gtgcatgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 32724979 - 32725056
Alignment:
Q  133 gtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 210  Q
    |||||||||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32724979 gtgcatgagatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32725056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 32718419 - 32718472
Alignment:
Q  2 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 55  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32718419 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32718472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 32724824 - 32724877
Alignment:
Q  2 tctcaccttgttgagtgttagtgttgatagacatcttattcagattttgtttag 55  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  32724824 tctcaccttgtttagtgttagtggtgatagacatcttattcacattttgtttag 32724877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 12734929 - 12734982
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgt 12734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 14530530 - 14530562
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||||    
T  14530530 ccacttagtgggataatgcttggttgttgttgt 14530562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 28960255 - 28960211
Alignment:
Q  320 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttgt 28960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 32749254 - 32749306
Alignment:
Q  561 tttggatttctttgtttgtagagattgaaaattgttactgcgctgttttcact 613  Q
    ||||||||||| |||||||||||||||||||||| ||||  |||| |||||||    
T  32749254 tttggatttctatgtttgtagagattgaaaattggtactatgctgctttcact 32749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 8197571 - 8197541
Alignment:
Q  334 acttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||    
T  8197571 acttagtgggataatgcttggttgttgttgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 364
Target Start/End: Complemental strand, 8202331 - 8202301
Alignment:
Q  334 acttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||    
T  8202331 acttagtgggataatgcttggttgttgttgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 12474980 - 12474926
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  12474980 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 227418 - 227471
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  227418 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 1404214 - 1404161
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||| |||||| ||| || | ||||||||||||||||||||| |||||||    
T  1404214 atttgatgaatgtagccgactcaatttagtgggataatgcttggttattgttgt 1404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 2073339 - 2073306
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  2073339 ccacttagtgggataaggcttggttgttgttgta 2073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3635376 - 3635323
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  3635376 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 4807824 - 4807877
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4807824 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 9531653 - 9531600
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  9531653 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 9556422 - 9556369
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| ||| ||||||||||||||| | ||||||||||||||||    
T  9556422 atttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttgt 9556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 12520115 - 12520062
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12520115 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 13474254 - 13474213
Alignment:
Q  324 agtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  13474254 agtcgactccacttagtgggataagacttggttgttgttgta 13474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 17670697 - 17670750
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  17670697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 17670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 25834907 - 25834960
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25834907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 28508907 - 28508960
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28508907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 30306261 - 30306314
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30306261 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 361
Target Start/End: Complemental strand, 35715885 - 35715856
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgt 361  Q
    ||||||||||||||||||||||||||||||    
T  35715885 ccacttagtgggataatgcttggttgttgt 35715856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 38328423 - 38328370
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  38328423 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 38435181 - 38435234
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  38435181 atttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttgt 38435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 38452718 - 38452685
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  38452718 ccacttagtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 41763096 - 41763043
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41763096 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 43573183 - 43573130
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43573183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 656 - 1051
Target Start/End: Original strand, 3001615 - 3002011
Alignment:
Q  656 acgattacaaattctactttccaagacacaggtatagcagctataggcgtggagcatcaatttcacttccaaatatcccagatatccctttaagcatggt 755  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3001615 acgattacaaattctactctccaagacacaggtatagcaggtataggcgtggtgcatcaatttcacttccaaatatcccacatatccctttaagcatggt 3001714  T
Q  756 gttgcctcattttggaaaatgaagtgctgtttttaagattctcaatacgtaagctactgcagttttttgtgcaatgtctaaattg-tgccgctacggaaa 854  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  3001715 gttgcctcattttggaaaatgaagtgctgctttcaagatgctcaatacgtaagctactgcagttttttgtgcaatgtctaaattgttgccactacggaaa 3001814  T
Q  855 tattttactagcatgcgttggttatgaatatgaatataatgtgctttgacatctgctgctgtacaatataatgattgatatctaatgatatattgtacta 954  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||| |||||    
T  3001815 tattttactagcatgtgttggttatgaatatgaatataatgtgctttggcatctgctgctgcacaatataatgattg-tatgtaatgatatattatacta 3001913  T
Q  955 aatgggatagtaatactatttaaaggttgcataaacggtaattgctgcagtttcttgtccaaactttatgac-attgacttgtttttacagagttatc 1051  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  3001914 aatgggatagtaatactatttaaaggttgcataaatggtaattgctgcagtttcttgtccaaactttatgacttttgacttgtttttacatagttatc 3002011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 5e-99
Query Start/End: Original strand, 275 - 522
Target Start/End: Original strand, 3000932 - 3001177
Alignment:
Q  275 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaata 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||  ||||    
T  3000932 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagccgaccccacttagtgggataaggcttggttgttgttgtactt-caata 3001030  T
Q  375 ttattttagttgtgttggcctgttttgattggcaagatttttccttttgtttattaatatgctttcattttagctgaatatctgctatggctgctaggat 474  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3001031 ttattttagttgtgttggcctgttttgattggcaagatttttcc-tttgtttattaatatgttttcattttagctgaagatctgctatggctgctaggat 3001129  T
Q  475 ataggcttataggatgaattatgtgcagtcatgattagtcaattttct 522  Q
    ||| |||||||||||||||||| |||||| | |||||||| |||||||    
T  3001130 atatgcttataggatgaattatttgcagtgacgattagtctattttct 3001177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 2999658 - 2999748
Alignment:
Q  131 ttgtgcatgagatcattattt------atttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 215  Q
    |||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999658 ttgtgcatgagatcattattttattttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 2999748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 3001217 - 3001291
Alignment:
Q  563 tggatttctttgtttgtagagattgaaaattgttactgcgctgttttcactattactttttcctatatcagaatg 637  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||    
T  3001217 tggatttctttgtttgtagatattgaaaattggtactgtgctgttttcactgttactttttcctataccagaatg 3001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1067 - 1136
Target Start/End: Original strand, 16895055 - 16895126
Alignment:
Q  1067 taaacccagttgaatcatgcagtatacacatt--gggtctaaaatgttttctcttccccaaaaggaaaagta 1136  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||    
T  16895055 taaacccaattgaatcatgcagtatacatattatgggtctaaaatgttttctcttccccaaagggaaaagta 16895126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 7432420 - 7432467
Alignment:
Q  168 tagcttgatgcaatttctagcttcattacatatttaaatcattgaata 215  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7432420 tagcttgatgcaatttgtagcttcattacatattgaaatcattgaata 7432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 3000803 - 3000849
Alignment:
Q  231 gtttccaacactagttatacaagaagagaagcgtgttcgctttgtgg 277  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  3000803 gtttccagaactagttatacaagaagagaagcgcgttcgctttgtgg 3000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 12492437 - 12492384
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||| |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12492437 atttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 3302073 - 3302127
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  3302073 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 3302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 408547 - 408494
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  408547 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 4496613 - 4496666
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4496613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 10124420 - 10124387
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  10124420 ccacttagtgggataaggcttggttgttgttgta 10124387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 10989117 - 10989084
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  10989117 ccacttagtgggataaggcttggttgttgttgta 10989084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 14665941 - 14665994
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14665941 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 16913914 - 16913881
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  16913914 ccacttagtgggataaggcttggttgttgttgta 16913881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 28976912 - 28976859
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28976912 atttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 29816611 - 29816664
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29816611 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 32489296 - 32489329
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  32489296 ccacttagtgggataaggcttggttgttgttgta 32489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 2e-37; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 14903523 - 14903439
Alignment:
Q  131 ttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14903523 ttgtgcatgagatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcactgaata 14903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 579647 - 579700
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  579647 atttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgt 579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 5096063 - 5096117
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||| |||||||||||||||| | |||||||||||||||    
T  5096063 atttgatctatgtagccgatcccacttagtgggataaggtttggttgttgttgta 5096117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 9706999 - 9707053
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  9706999 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 9707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 34934883 - 34934829
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  34934883 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 34934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 12890804 - 12890857
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 28085605 - 28085658
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28085605 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 31819060 - 31819113
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||| |||||    
T  31819060 atttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgt 31819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 34143818 - 34143765
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34143818 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34143765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 34156434 - 34156381
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34156434 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000007; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 48712119 - 48712074
Alignment:
Q  320 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48712119 atgtagttgatcccacttagtgggataatgcttggttgttgttgta 48712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 25191606 - 25191659
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||  ||| |||||||||||||||||||||||||||||||||    
T  25191606 atttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttgt 25191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 52139027 - 52139082
Alignment:
Q  309 ttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52139027 ttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 31566214 - 31566160
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  31566214 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 40106673 - 40106619
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  ||||||| ||  |||||||||||||||| |||||||||||||||||    
T  40106673 atttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttgta 40106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 22301 - 22354
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  22301 atttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgt 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 311362 - 311309
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  311362 atttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttgt 311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 2133665 - 2133612
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||| ||||  |||||||||||||||| ||||||||||||||||    
T  2133665 atttgatccatgtactcgaccccacttagtgggataaggcttggttgttgttgt 2133612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 5169061 - 5169114
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  5169061 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 12096758 - 12096705
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12096758 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 15296157 - 15296190
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  15296157 ccacttagtgggataaggcttggttgttgttgta 15296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 27192473 - 27192506
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  27192473 ccacttagtgggataaggcttggttgttgttgta 27192506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 31146928 - 31146981
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| ||| ||||||||||||||||| ||| ||||||||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgt 31146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 43396114 - 43396081
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  43396114 ccacttagtgggataaagcttggttgttgttgta 43396081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 45289123 - 45289090
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  45289123 ccacttagtgggataaggcttggttgttgttgta 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 45933375 - 45933408
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||||||||||||| |||||||    
T  45933375 ccacttagtgggataatgcttggttgatgttgta 45933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 48508464 - 48508517
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  48508464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 53262370 - 53262423
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  53262370 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 53262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 54128608 - 54128661
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  54128608 atttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgttgt 54128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 16807 - 16861
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  16807 atttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgta 16861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 6957827 - 6957880
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  6957827 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgt 6957880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 43434153 - 43434206
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  43434153 atttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgttgt 43434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 32339797 - 32339841
Alignment:
Q  320 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||    
T  32339797 atgtagtctattctacttagtgggataaggcttggttgttgttgt 32339841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 436458 - 436511
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  436458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 436511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 334 - 363
Target Start/End: Original strand, 4548274 - 4548303
Alignment:
Q  334 acttagtgggataatgcttggttgttgttg 363  Q
    ||||||||||||||||||||||||||||||    
T  4548274 acttagtgggataatgcttggttgttgttg 4548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 21528517 - 21528570
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 23906329 - 23906296
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  23906329 ccacttagtgggataaggcttggttgttgttgta 23906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 30634159 - 30634106
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 31959867 - 31959814
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31959867 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 38789655 - 38789622
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  38789655 ccacttagtgggataaggcttggttgttgttgta 38789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 48622575 - 48622542
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  48622575 ccacttagtgggataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 49416957 - 49416990
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  49416957 ccacttagtgggataaggcttggttgttgttgta 49416990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 50238668 - 50238615
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238668 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 50238754 - 50238701
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238754 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 50471777 - 50471810
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  50471777 ccacttagtgggataacgcttggttgttgttgta 50471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 52569568 - 52569515
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52569568 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 55007975 - 55008028
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3777313 - 3777260
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||| ||||||||| |||||||||||||||||||||||    
T  3777313 atttgatccatgtagccgatcccacttagtaggataatgcttggttgttgttgt 3777260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 6025834 - 6025887
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||||||||||||||||||||| |||||||||| ||||    
T  6025834 atttgatccatgtagccgattccacttagtgggataatacttggttgtttttgt 6025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 22930643 - 22930675
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||||    
T  22930643 ccacttagtgggataatgcttggttgttgttgt 22930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 31274433 - 31274401
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||||    
T  31274433 ccacttagtgggataatgcttggttgttgttgt 31274401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 43898459 - 43898491
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||||    
T  43898459 ccacttagtgggataatgcttggttgttgttgt 43898491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 36339837 - 36339803
Alignment:
Q  331 tccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||| ||||||||||||||||||||    
T  36339837 tccacttagtgggaaaatgcttggttgttgttgta 36339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 39140744 - 39140794
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 361  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||||||    
T  39140744 atttgattcatgtagccgaccccacttagtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 49347446 - 49347392
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  49347446 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 52921309 - 52921363
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  52921309 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 696499 - 696552
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  696499 atttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttgt 696552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 1210974 - 1211027
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1210974 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 25979284 - 25979231
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25979284 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 29577481 - 29577534
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29577481 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 29975449 - 29975482
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  29975449 ccacttagtgggataaggcttggttgttgttgta 29975482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 30202183 - 30202130
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30202183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 32079230 - 32079177
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    ||||||| ||||||| |||  |||||| ||||||||| ||||||||||||||||    
T  32079230 atttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgttgt 32079177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 34444585 - 34444638
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 40568442 - 40568409
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  40568442 ccacttagtgggataaggcttggttgttgttgta 40568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 41560458 - 41560511
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41560458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 42337806 - 42337839
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  42337806 ccacttagtgggataaggcttggttgttgttgta 42337839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 43028840 - 43028807
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||||||||||| |||||||||||||||||    
T  43028840 ccacttagtgggataaggcttggttgttgttgta 43028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 43481851 - 43481798
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 44941829 - 44941776
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  44941829 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 50636310 - 50636363
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  50636310 atttgatcaatgtagtcgattctacttagcgggataaggcttgattgttgttgt 50636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 50846791 - 50846844
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  ||||||||||||| |||||||||||||||||||    
T  50846791 atttgatctatgtagccgacaccacttagtgggaaaatgcttggttgttgttgt 50846844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000007; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 35643640 - 35643608
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||||||||||||||||||||||||||||    
T  35643640 ccacttagtgggataatgcttggttgttgttgt 35643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 39851723 - 39851767
Alignment:
Q  169 agcttgatgcaatttctagcttcattacatatttaaatcattgaa 213  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  39851723 agcttgatgtaatttttagcttcattacatagttaaatcattgaa 39851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 44529454 - 44529508
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  44529454 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 44529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 45419464 - 45419518
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 45419518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 1313814 - 1313843
Alignment:
Q  332 ccacttagtgggataatgcttggttgttgt 361  Q
    ||||||||||||||||||||||||||||||    
T  1313814 ccacttagtgggataatgcttggttgttgt 1313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 1928640 - 1928587
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1928640 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 4955420 - 4955481
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaa 372  Q
    |||||||  |||||||||||  ||||||||| ||||| | ||||||||||||||| ||||||    
T  4955420 atttgatttatgtagtcgatctcacttagtgagataaggtttggttgttgttgtatttaaaa 4955481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 10668550 - 10668497
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    ||||||| ||||||| |||   ||||||||||||||| ||||||||||||||||    
T  10668550 atttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttgt 10668497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 11523776 - 11523723
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11523776 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 12611735 - 12611780
Alignment:
Q  320 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||| |||| ||| |||||||||||| |||||||||||||||||    
T  12611735 atgtagccgatcccaattagtgggataaggcttggttgttgttgta 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 14742135 - 14742082
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14742135 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 25473456 - 25473403
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25473456 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 29520903 - 29520932
Alignment:
Q  336 ttagtgggataatgcttggttgttgttgta 365  Q
    ||||||||||||||||||||||||||||||    
T  29520903 ttagtgggataatgcttggttgttgttgta 29520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 32276914 - 32276967
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32276914 atttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttgt 32276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 36545378 - 36545431
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  36545378 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 36545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000007; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 12966254 - 12966298
Alignment:
Q  320 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttgt 12966298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 33732061 - 33732115
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| || | |||||||||||||||| |||||||||||||||||    
T  33732061 atttgatccatgtagccggtcccacttagtgggataaggcttggttgttgttgta 33732115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 40149066 - 40149016
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 361  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttgt 40149016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 40979981 - 40979927
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  40979981 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 40979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 48919341 - 48919395
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 365  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||||    
T  48919341 atttgatccatgtagtcgaccccacttaatgggataaggcttggttgttgttgta 48919395  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 1011275 - 1011328
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1011328  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 2885775 - 2885722
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 5418303 - 5418356
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  ||| |||||||||||| ||||||||||||||||    
T  5418303 atttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttgt 5418356  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 11594189 - 11594242
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11594189 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11594242  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 12841328 - 12841275
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12841328 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12841275  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 22349849 - 22349902
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||||||  |||||||||||||||| ||||| ||||||||||    
T  22349849 atttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttgt 22349902  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 27649009 - 27649062
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  27649009 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 27649062  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 28208381 - 28208328
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28208381 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 29650613 - 29650666
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29650666  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 31005434 - 31005487
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31005487  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 31682655 - 31682602
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31682655 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31682602  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 31869155 - 31869102
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31869155 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31869102  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 32631793 - 32631846
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32631793 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 32631846  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 33073158 - 33073211
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||| ||||    
T  33073158 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttattgt 33073211  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 36101830 - 36101777
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  ||||||| ||  |||||||||||||||| ||||||||||||||||    
T  36101830 atttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttgt 36101777  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 37618174 - 37618227
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  37618174 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 37618227  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 39906425 - 39906372
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  39906425 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39906372  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 28942 - 28889
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28942 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 31697 - 31750
Alignment:
Q  311 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 364  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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