View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3061_high_20 (Length: 280)
Name: NF3061_high_20
Description: NF3061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3061_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 48657326 - 48657071
Alignment:
| Q |
13 |
attctgtatatgttgcttcataggataaggggtcttactttcctctcttcgagtttgtttgggccaaatatgtgaagtcgggcttcagcatcgtcggatg |
112 |
Q |
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| T |
48657326 |
attctgtatatgttgcttcataggataaggggtcttactttcctctcttcgagtttgtttgggccaaatatgtgaagtcgggcttcagcatcgtcggatg |
48657227 |
T |
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| Q |
113 |
aaagtcctcctggtgatgttttcaacagttcgaaaacttgttctagtggtatgcgctcctgaagtcaagaacatgtaaatgcaaaaattacaaaatgaag |
212 |
Q |
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| T |
48657226 |
aaagtcctcctggtgatgttttcaacagttcgaaaacttgttctagtggtatgcgctcctgaagtcaagaacatgtaaatgcaaaaattacaaaatgaag |
48657127 |
T |
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| Q |
213 |
ttgaaaatgcaagaagaaagctagttaccaaatcaatgccctctcggttgaaattg |
268 |
Q |
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| T |
48657126 |
ttgaaaatgcaagaagaaagctagttaccaaatcaatgccctctcggttgaaattg |
48657071 |
T |
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