View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3061_high_3 (Length: 474)

Name: NF3061_high_3
Description: NF3061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3061_high_3
NF3061_high_3
[»] chr6 (34 HSPs)
chr6 (317-456)||(3809326-3809462)
chr6 (329-456)||(10076729-10076856)
chr6 (284-444)||(17759315-17759494)
chr6 (329-447)||(22964139-22964258)
chr6 (329-447)||(23824135-23824254)
chr6 (367-456)||(9183409-9183498)
chr6 (373-444)||(603648-603719)
chr6 (329-407)||(26830696-26830774)
chr6 (367-456)||(21593128-21593217)
chr6 (326-456)||(5407307-5407438)
chr6 (326-456)||(5411632-5411763)
chr6 (373-447)||(31979958-31980032)
chr6 (327-447)||(5757014-5757135)
chr6 (373-456)||(5571846-5571929)
chr6 (385-456)||(24435566-24435637)
chr6 (327-447)||(23896773-23896894)
chr6 (395-447)||(24714813-24714865)
chr6 (357-456)||(21272555-21272654)
chr6 (398-456)||(33160753-33160812)
chr6 (367-456)||(18234515-18234605)
chr6 (379-456)||(26661423-26661500)
chr6 (379-456)||(26767394-26767471)
chr6 (329-413)||(22709496-22709580)
chr6 (398-456)||(5413847-5413906)
chr6 (398-456)||(30834936-30834995)
chr6 (327-409)||(2171959-2172041)
chr6 (360-456)||(5017063-5017161)
chr6 (360-456)||(31086040-31086138)
chr6 (327-411)||(5674292-5674376)
chr6 (398-456)||(5406597-5406656)
chr6 (324-390)||(5406643-5406710)
chr6 (398-456)||(5410922-5410981)
chr6 (324-390)||(5410968-5411035)
chr6 (398-456)||(16452839-16452898)
[»] chr1 (33 HSPs)
chr1 (329-456)||(11348143-11348270)
chr1 (329-446)||(31658880-31658997)
chr1 (329-456)||(49917991-49918118)
chr1 (329-456)||(37879508-37879635)
chr1 (329-446)||(37033696-37033814)
chr1 (329-456)||(10924865-10924992)
chr1 (329-457)||(3156509-3156637)
chr1 (372-446)||(44454844-44454918)
chr1 (324-447)||(20762307-20762432)
chr1 (327-456)||(13604158-13604288)
chr1 (360-456)||(193067-193163)
chr1 (329-447)||(3188992-3189111)
chr1 (329-447)||(3197809-3197928)
chr1 (329-447)||(3206627-3206746)
chr1 (358-456)||(3282138-3282237)
chr1 (351-417)||(28223860-28223926)
chr1 (356-417)||(28220665-28220726)
chr1 (364-456)||(37070199-37070292)
chr1 (285-341)||(11348080-11348136)
chr1 (327-441)||(19360975-19361090)
chr1 (327-413)||(19365831-19365917)
chr1 (399-456)||(29135762-29135819)
chr1 (327-413)||(26644436-26644522)
chr1 (329-456)||(1833163-1833291)
chr1 (385-456)||(13598832-13598904)
chr1 (398-446)||(30476857-30476905)
chr1 (322-410)||(51765048-51765136)
chr1 (398-456)||(13316717-13316776)
chr1 (329-443)||(4553060-4553175)
chr1 (382-456)||(16124250-16124325)
chr1 (398-456)||(13547706-13547763)
chr1 (398-456)||(13549617-13549674)
chr1 (396-456)||(21536175-21536236)
[»] chr4 (49 HSPs)
chr4 (329-447)||(2209144-2209262)
chr4 (329-447)||(26176032-26176150)
chr4 (329-456)||(6655379-6655507)
chr4 (329-456)||(46570143-46570270)
chr4 (329-456)||(37740268-37740395)
chr4 (329-456)||(6742953-6743080)
chr4 (367-456)||(26363727-26363816)
chr4 (329-456)||(5429321-5429449)
chr4 (324-447)||(56179032-56179156)
chr4 (325-447)||(5370483-5370607)
chr4 (353-456)||(12745815-12745919)
chr4 (357-447)||(9927869-9927959)
chr4 (343-456)||(52095759-52095872)
chr4 (324-447)||(5143701-5143826)
chr4 (379-446)||(34570823-34570890)
chr4 (373-456)||(36314812-36314895)
chr4 (373-456)||(36329021-36329104)
chr4 (329-456)||(5148109-5148237)
chr4 (360-444)||(54882495-54882579)
chr4 (373-456)||(41639033-41639116)
chr4 (383-446)||(50674473-50674536)
chr4 (284-342)||(2209080-2209138)
chr4 (367-456)||(25861608-25861698)
chr4 (372-456)||(40630451-40630535)
chr4 (374-456)||(8689079-8689162)
chr4 (353-447)||(12739946-12740041)
chr4 (353-447)||(12748152-12748247)
chr4 (327-441)||(13992701-13992816)
chr4 (373-456)||(27417568-27417651)
chr4 (372-447)||(35661906-35661981)
chr4 (358-456)||(5268766-5268865)
chr4 (373-456)||(54867611-54867694)
chr4 (398-456)||(54200305-54200363)
chr4 (387-457)||(50263313-50263383)
chr4 (360-456)||(3777980-3778077)
chr4 (379-456)||(24968802-24968879)
chr4 (284-324)||(46570294-46570334)
chr4 (327-410)||(31495756-31495839)
chr4 (398-456)||(52083056-52083115)
chr4 (398-456)||(52094063-52094122)
chr4 (334-411)||(3909743-3909821)
chr4 (382-447)||(10047805-10047871)
chr4 (327-413)||(28468040-28468126)
chr4 (329-390)||(54200350-54200412)
chr4 (360-413)||(16628440-16628493)
chr4 (373-444)||(5396272-5396344)
chr4 (398-447)||(30000881-30000931)
chr4 (398-447)||(29254205-29254254)
chr4 (386-456)||(16622887-16622959)
[»] chr7 (47 HSPs)
chr7 (338-447)||(6360538-6360647)
chr7 (358-456)||(47674342-47674440)
chr7 (358-456)||(47676535-47676633)
chr7 (329-456)||(23554681-23554809)
chr7 (317-447)||(2361565-2361696)
chr7 (329-456)||(4538950-4539077)
chr7 (334-447)||(29608181-29608295)
chr7 (329-419)||(48599932-48600022)
chr7 (356-456)||(27347593-27347692)
chr7 (329-456)||(4796206-4796334)
chr7 (324-456)||(4178410-4178544)
chr7 (327-456)||(21983674-21983804)
chr7 (337-456)||(48489080-48489199)
chr7 (327-444)||(21989351-21989468)
chr7 (367-456)||(2389754-2389843)
chr7 (382-456)||(2647288-2647362)
chr7 (373-447)||(30026408-30026481)
chr7 (385-447)||(31733358-31733420)
chr7 (345-456)||(19495628-19495740)
chr7 (334-390)||(2761746-2761802)
chr7 (372-444)||(32358465-32358537)
chr7 (372-456)||(43863946-43864030)
chr7 (398-456)||(2761701-2761759)
chr7 (358-456)||(18126316-18126413)
chr7 (379-456)||(26417005-26417082)
chr7 (327-447)||(47264083-47264204)
chr7 (373-456)||(14070232-14070316)
chr7 (373-456)||(14380260-14380344)
chr7 (357-456)||(4585831-4585930)
chr7 (327-456)||(2479767-2479897)
chr7 (327-413)||(25767397-25767483)
chr7 (382-456)||(33332041-33332115)
chr7 (327-410)||(39730996-39731079)
chr7 (360-456)||(49092122-49092220)
chr7 (327-410)||(48408461-48408544)
chr7 (398-456)||(1113367-1113425)
chr7 (327-409)||(18409254-18409336)
chr7 (327-413)||(21646494-21646580)
chr7 (329-390)||(48491241-48491302)
chr7 (284-341)||(48600029-48600086)
chr7 (366-456)||(79821-79913)
chr7 (398-456)||(24515159-24515218)
chr7 (327-410)||(43504575-43504658)
chr7 (398-448)||(46515915-46515965)
chr7 (281-333)||(29608109-29608161)
chr7 (284-343)||(30814229-30814288)
chr7 (401-456)||(35853626-35853682)
[»] chr2 (38 HSPs)
chr2 (329-456)||(2837243-2837370)
chr2 (33-266)||(31677514-31677744)
chr2 (329-447)||(36318417-36318537)
chr2 (33-128)||(31629942-31630037)
chr2 (329-456)||(36988474-36988602)
chr2 (329-446)||(29867521-29867639)
chr2 (329-456)||(34389282-34389410)
chr2 (358-456)||(20522654-20522752)
chr2 (324-456)||(28258710-28258843)
chr2 (358-447)||(39284568-39284657)
chr2 (324-443)||(6595406-6595526)
chr2 (367-456)||(21630377-21630466)
chr2 (324-447)||(45099390-45099515)
chr2 (382-456)||(14698600-14698674)
chr2 (367-456)||(17865609-17865699)
chr2 (358-456)||(39483308-39483407)
chr2 (176-258)||(31629840-31629924)
chr2 (360-444)||(33528192-33528277)
chr2 (285-341)||(28446384-28446440)
chr2 (322-441)||(30832979-30833099)
chr2 (327-410)||(32289211-32289294)
chr2 (327-441)||(40739279-40739394)
chr2 (327-409)||(3492232-3492314)
chr2 (382-447)||(23078062-23078128)
chr2 (327-413)||(25410117-25410203)
chr2 (367-447)||(17863872-17863953)
chr2 (398-456)||(2334816-2334875)
chr2 (398-456)||(4503531-4503590)
chr2 (382-456)||(10706843-10706918)
chr2 (358-445)||(33118578-33118665)
chr2 (329-391)||(38311996-38312059)
chr2 (322-410)||(6266332-6266420)
chr2 (324-390)||(4503577-4503644)
chr2 (398-456)||(5723653-5723712)
chr2 (381-444)||(35447512-35447575)
chr2 (398-456)||(36206064-36206123)
chr2 (329-375)||(28446447-28446493)
chr2 (382-445)||(8389738-8389803)
[»] scaffold0286 (1 HSPs)
scaffold0286 (329-456)||(10981-11109)
[»] chr8 (30 HSPs)
chr8 (329-456)||(42435608-42435736)
chr8 (345-447)||(27810956-27811058)
chr8 (329-456)||(12703038-12703165)
chr8 (326-444)||(43036061-43036180)
chr8 (358-456)||(15212457-15212555)
chr8 (326-456)||(1746617-1746748)
chr8 (329-456)||(30142983-30143111)
chr8 (367-456)||(22975996-22976085)
chr8 (329-456)||(4731300-4731427)
chr8 (324-456)||(34254727-34254860)
chr8 (379-456)||(11383480-11383557)
chr8 (324-446)||(34256913-34257036)
chr8 (324-456)||(31217892-31218026)
chr8 (324-444)||(19945750-19945872)
chr8 (334-438)||(4733472-4733576)
chr8 (326-456)||(42497853-42497984)
chr8 (357-447)||(4743601-4743692)
chr8 (372-443)||(40221231-40221302)
chr8 (398-456)||(4283039-4283097)
chr8 (337-452)||(1345774-1345889)
chr8 (358-456)||(5702046-5702145)
chr8 (367-456)||(19175308-19175398)
chr8 (331-456)||(10014802-10014928)
chr8 (327-447)||(7412768-7412889)
chr8 (327-410)||(2627381-2627464)
chr8 (327-413)||(1261477-1261563)
chr8 (326-390)||(44303514-44303577)
chr8 (398-456)||(17982363-17982422)
chr8 (398-456)||(44303564-44303623)
chr8 (326-390)||(19948766-19948831)
[»] chr3 (56 HSPs)
chr3 (329-456)||(49200068-49200196)
chr3 (324-447)||(5258552-5258677)
chr3 (329-446)||(34490656-34490773)
chr3 (358-456)||(29812734-29812832)
chr3 (367-456)||(4569413-4569502)
chr3 (327-447)||(33386200-33386321)
chr3 (373-446)||(43402417-43402490)
chr3 (324-447)||(27985998-27986122)
chr3 (322-456)||(37726106-37726241)
chr3 (373-456)||(43404350-43404433)
chr3 (324-456)||(45094800-45094933)
chr3 (373-456)||(54593172-54593255)
chr3 (372-456)||(5236856-5236940)
chr3 (367-447)||(36018324-36018404)
chr3 (373-456)||(40592353-40592436)
chr3 (373-456)||(55302582-55302664)
chr3 (372-456)||(7761949-7762033)
chr3 (327-447)||(27453397-27453518)
chr3 (360-456)||(6096217-6096313)
chr3 (345-456)||(7764110-7764221)
chr3 (329-456)||(44331210-44331338)
chr3 (367-456)||(31340659-31340749)
chr3 (360-456)||(16264780-16264877)
chr3 (360-456)||(27038473-27038570)
chr3 (358-447)||(51398497-51398586)
chr3 (326-440)||(3393244-3393360)
chr3 (360-456)||(46173189-46173284)
chr3 (327-441)||(26928143-26928258)
chr3 (324-441)||(32143769-32143887)
chr3 (373-447)||(40912805-40912879)
chr3 (360-456)||(8370047-8370144)
chr3 (360-456)||(36029525-36029622)
chr3 (382-446)||(48438657-48438722)
chr3 (367-447)||(8127071-8127151)
chr3 (322-410)||(23198384-23198472)
chr3 (360-455)||(35925923-35926019)
chr3 (329-456)||(44331846-44331974)
chr3 (358-456)||(29810539-29810637)
chr3 (367-456)||(39032120-39032210)
chr3 (360-456)||(40735100-40735198)
chr3 (329-456)||(23410729-23410857)
chr3 (327-441)||(1306426-1306541)
chr3 (327-410)||(23200583-23200666)
chr3 (324-456)||(9636527-9636660)
chr3 (367-456)||(21711633-21711723)
chr3 (368-456)||(27027137-27027227)
chr3 (327-456)||(37408099-37408228)
chr3 (360-456)||(40734169-40734267)
chr3 (360-456)||(47923460-47923558)
chr3 (385-456)||(40845085-40845157)
chr3 (327-410)||(800748-800831)
chr3 (398-456)||(5260722-5260781)
chr3 (324-446)||(27974474-27974597)
chr3 (382-456)||(1735884-1735958)
chr3 (403-456)||(24694767-24694820)
chr3 (279-343)||(55302713-55302777)
[»] scaffold0066 (1 HSPs)
scaffold0066 (329-456)||(20814-20942)
[»] scaffold0176 (1 HSPs)
scaffold0176 (334-447)||(17672-17786)
[»] chr5 (40 HSPs)
chr5 (358-456)||(42426634-42426732)
chr5 (358-447)||(42428826-42428915)
chr5 (357-456)||(32636493-32636593)
chr5 (329-447)||(30683316-30683434)
chr5 (327-456)||(9352870-9353000)
chr5 (329-390)||(19806069-19806130)
chr5 (329-456)||(13239394-13239521)
chr5 (373-456)||(16651021-16651104)
chr5 (367-456)||(13487885-13487972)
chr5 (285-390)||(27014914-27015038)
chr5 (373-447)||(38746456-38746530)
chr5 (367-447)||(5057511-5057591)
chr5 (327-410)||(16409140-16409223)
chr5 (398-456)||(535614-535672)
chr5 (398-456)||(27015025-27015083)
chr5 (398-447)||(533492-533541)
chr5 (360-456)||(11916540-11916637)
chr5 (372-456)||(37438830-37438915)
chr5 (337-390)||(39468976-39469029)
chr5 (367-456)||(40146729-40146818)
chr5 (322-410)||(16407699-16407787)
chr5 (334-410)||(28751027-28751103)
chr5 (367-456)||(14520661-14520751)
chr5 (327-410)||(9789663-9789746)
chr5 (398-456)||(25412472-25412531)
chr5 (387-456)||(12083773-12083843)
chr5 (398-447)||(13342771-13342821)
chr5 (398-456)||(19806117-19806175)
chr5 (398-456)||(39468931-39468989)
chr5 (372-411)||(213029-213068)
chr5 (327-390)||(15464999-15465062)
chr5 (327-410)||(18442087-18442170)
chr5 (327-410)||(26177529-26177612)
chr5 (402-456)||(30182302-30182357)
chr5 (368-446)||(31004730-31004809)
chr5 (327-390)||(36931906-36931969)
chr5 (398-447)||(15464962-15465012)
chr5 (327-413)||(24136335-24136421)
chr5 (326-390)||(25412421-25412485)
chr5 (327-404)||(26170420-26170497)
[»] scaffold0014 (1 HSPs)
scaffold0014 (372-456)||(80900-80984)
[»] scaffold0098 (1 HSPs)
scaffold0098 (324-456)||(45630-45763)
[»] scaffold0087 (2 HSPs)
scaffold0087 (324-456)||(36365-36498)
scaffold0087 (327-456)||(43497-43627)
[»] scaffold0006 (3 HSPs)
scaffold0006 (327-456)||(132815-132945)
scaffold0006 (373-456)||(2925-3009)
scaffold0006 (385-456)||(6117-6189)
[»] scaffold0016 (1 HSPs)
scaffold0016 (372-446)||(114271-114345)
[»] scaffold0510 (1 HSPs)
scaffold0510 (327-447)||(1146-1267)
[»] scaffold0002 (1 HSPs)
scaffold0002 (373-456)||(434217-434302)
[»] scaffold1519 (1 HSPs)
scaffold1519 (327-413)||(545-631)
[»] scaffold0188 (1 HSPs)
scaffold0188 (327-413)||(17494-17580)
[»] scaffold0466 (1 HSPs)
scaffold0466 (398-446)||(6820-6868)
[»] scaffold0036 (1 HSPs)
scaffold0036 (360-411)||(86066-86116)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 456
Target Start/End: Complemental strand, 3809462 - 3809326
Alignment:
Q  317 aaaacttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagct 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  3809462 aaaacttgaaatcgtgacacgattttgcaatgtcgagagctgtttcgaagggtgcccaatcgtgacacgattttggggaaacgtgacacgattttcggct 3809363  T
Q  417 tgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
       |||| ||||||||||||||||||||||| ||| ||||    
T  3809362 ---tgggaaagttttcaggataaggttggtcgtaccttgg 3809326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 10076729 - 10076856
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| | |||||||   | ||    
T  10076729 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttttaacttgctgattacgt 10076828  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||| ||||    
T  10076829 tttcaggataaggttggtcgtaccttgg 10076856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 444
Target Start/End: Original strand, 17759315 - 17759494
Alignment:
Q  284 ttgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacacgattt-------------------tgcaatgtcgagagctgttttgc 364  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||                   |||||||||||||| ||| ||      
T  17759315 ttgttgaggatgactctcaatttggtgttttggaaaacttggaatcgtgacacgatttgtgaagcgtgtcacaattttgcaatgtcgagagttgtatttt 17759414  T
Q  365 aaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    | ||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  17759415 agggtgcccaaccgtgacacgattttggggaaacgtgacacaattttcggcttgctggacaagttttcaggataaggttg 17759494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 22964258 - 22964139
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||||||||  ||||||||| ||||    
T  22964258 cgtgtcacgattttggtaatgtcgagagctgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaag 22964159  T
Q  428 ttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||    
T  22964158 ttttcaggataaggttggtc 22964139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 23824135 - 23824254
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||  ||||| ||| ||||||||||| |||||||||||||||||  ||||||||| ||||    
T  23824135 cgtgtcacgattttggtaatgtcgagagctgttttgcagggtgttcaatcgtgatacgattttgggaaaacgtgacacgatttttggcttgctggacaag 23824234  T
Q  428 ttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||    
T  23824235 ttttcaggataaggttggtc 23824254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 9183498 - 9183409
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||    
T  9183498 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgacttgctgggcaagttttcaggataaggttggtcgtaccttgg 9183409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 373 - 444
Target Start/End: Complemental strand, 603719 - 603648
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    ||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  603719 caatcgtgacacgattttgggaaaacgtgacatgattttcggcttgctgggcaagttttcaggataaggttg 603648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 26830774 - 26830696
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacga 407  Q
    |||| |||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||| ||||||||||||||    
T  26830774 cgtgtcacgattttgcaatgtcgagagctgttttgtagggtgctcaatcgtgacacgattttggagaaacgtgacacga 26830696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 21593128 - 21593217
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| |||||| |||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||| ||||    
T  21593128 ggtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggcatgtttttaggataaggttggtcgtaccttgg 21593217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 456
Target Start/End: Complemental strand, 5407438 - 5407307
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    ||||||||||||||||||  |||||||||||||||||| ||  ||| |||||| ||||||||||||||  || ||||||||  ||||  |||||||||||    
T  5407438 aatcgtgacacgattttggtaatgtcgagagctgtttt-cagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggc 5407340  T
Q  425 aag-ttttcaggataaggttggtcatacattgg 456  Q
    ||| |||||| ||||||||||||| ||| ||||    
T  5407339 aagattttcaagataaggttggtcgtaccttgg 5407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 456
Target Start/End: Complemental strand, 5411763 - 5411632
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    ||||||||||||||||||  |||||||||||||||||| ||  ||| |||||| ||||||||||||||  || ||||||||  ||||  |||||||||||    
T  5411763 aatcgtgacacgattttggtaatgtcgagagctgtttt-cagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttttggcttgctgggc 5411665  T
Q  425 aag-ttttcaggataaggttggtcatacattgg 456  Q
    ||| |||||| ||||||||||||| ||| ||||    
T  5411664 aagattttcaagataaggttggtcgtaccttgg 5411632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 447
Target Start/End: Complemental strand, 31980032 - 31979958
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| || |||||||||||  ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  31980032 caatcgtgtcacgattttggaaaaacgtgacacaattttcaacttgctgggcacgttttcaggataaggttggtc 31979958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 447
Target Start/End: Original strand, 5757014 - 5757135
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||| |||||| ||||||| ||| || |||||| |||| | |||| ||  ||||||||| | || ||||||||||||||| | ||||||||  |    
T  5757014 atcgtgacacaattttgtaatgtcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggtta 5757113  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  5757114 agttttcaggataaggttggtc 5757135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 5571846 - 5571929
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || |||||||||| | ||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||| ||||    
T  5571846 caatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgtttttaggttaaggttggtcgtaccttgg 5571929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 24435566 - 24435637
Alignment:
Q  385 gattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| ||||||||||||||||||| |||| | |||| ||||||||||||||||||||| ||| ||||    
T  24435566 gattttgggaaaacgtgacacgattttcaacttgtttggcacgttttcaggataaggttggtcgtaccttgg 24435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 23896894 - 23896773
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacga-ttttcagcttgctgggca 425  Q
    ||||||||||||||||| ||| ||| ||| || |||||| |||| | |||| ||  ||||||||| | || |||||||||| |||| | ||||||||  |    
T  23896894 atcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggtta 23896795  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  23896794 agttttcaggataaggttggtc 23896773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 24714865 - 24714813
Alignment:
Q  395 aaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  24714865 aaacgtgacacgattttcaacttgctgggcacgttttcaggataagattggtc 24714813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 21272555 - 21272654
Alignment:
Q  357 tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||| | |||| |||||| ||||||||||||||| || |||| |||||||||   | || | |||| ||||||||||||||||||||||||| ||||    
T  21272555 tgttttgaagggtgtccaatcgtgacacgattttgggtaatcgtgtcacgatttttgacatgtttggcacgttttcaggataaggttggtcataccttgg 21272654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 33160812 - 33160753
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||    
T  33160812 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtacattgg 33160753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 18234605 - 18234515
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || || ||||||||| |||||||| ||||||||||  ||||||||| | ||||||||||||||||||||| ||| ||||    
T  18234605 ggtgctcaatcgtgtcaggattttgggaaaacgtgatacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 18234515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 26661423 - 26661500
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| ||| |||||| |||||||  |||||||| |  ||||||||||||||||||||| ||| ||||    
T  26661423 tgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgg 26661500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 26767394 - 26767471
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| ||| |||||| |||||||  |||||||| |  ||||||||||||||||||||| ||| ||||    
T  26767394 tgacacgattttgggaaaatgtgacaagattttcgacttgctggactcgttttcaggataaggttggtcgtaccttgg 26767471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 22709580 - 22709496
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    |||||||||||||||  ||| |  |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  22709580 cgtgacacgattttgtgatgccatgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttca 22709496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 5413906 - 5413847
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  5413906 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 5413847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 30834995 - 30834936
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  30834995 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 30834936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 2172041 - 2171959
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatt 409  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||    
T  2172041 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgatt 2171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 5017063 - 5017161
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggca-agttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||| | |||||||||||||||||||  ||| ||||| | | |||||||||||||||||||| ||| ||||    
T  5017063 tttgcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttactgggtacatttttcaggataaggttggtcgtaccttgg 5017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 31086040 - 31086138
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||  |||||||||||||||||| | |||||| || | | |||||||||||||||||||| ||| ||||    
T  31086040 tttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgg 31086138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 5674292 - 5674376
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatttt 411  Q
    ||||||||| |||||||  ||| || |||||| |||||| |||||| |||| |||||| || ||||| || ||||||||||||||    
T  5674292 atcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgatttt 5674376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 5406656 - 5406597
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||||| ||| ||||    
T  5406656 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgg 5406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 5406710 - 5406643
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||    
T  5406710 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgatttt 5406643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 5410981 - 5410922
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||||| ||| ||||    
T  5410981 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgg 5410922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 5411035 - 5410968
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||    
T  5411035 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgatttt 5410968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 16452898 - 16452839
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||||||||| ||| ||||    
T  16452898 cgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttgg 16452839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 11348143 - 11348270
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  11348143 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgtctaatcgtgacacgattttggagaaacgtgacacgattttcggcttgttgggcaagt 11348242  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||||||||    
T  11348243 tttcaggataaggttggtcgtacattgg 11348270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 329 - 446
Target Start/End: Original strand, 31658880 - 31658997
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||  |||||||||| ||||    
T  31658880 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattttttgcttgctgggaaagt 31658979  T
Q  429 tttcaggataaggttggt 446  Q
    ||||||||||||||||||    
T  31658980 tttcaggataaggttggt 31658997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 49917991 - 49918118
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |  ||||||||||||||||| | ||||||||||| ||    
T  49917991 cgtgtcacaattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgattttcgaaaaacgtgacacgatttttaacttgctgggcacgt 49918090  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||||||| ||||    
T  49918091 tttcaggataaggttggtcataccttgg 49918118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 37879635 - 37879508
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||  ||| ||||||||||||||||||| |||| |||||    
T  37879635 cgtgtcacgattttgcaatgtcgagagttgttttgcagggtgctcaatcgtgacacgattttggaaaaatgtgacacgattttcagcttactggacaagt 37879536  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||| ||||||||||||||| ||| ||||    
T  37879535 ttttaggataaggttggtcgtaccttgg 37879508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 329 - 446
Target Start/End: Complemental strand, 37033814 - 37033696
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||||||||||||| |||| ||||||||| |||| |||||| |||||||||||| ||||||| |||||||||||||  ||||| |||||||    
T  37033814 cgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcgtgacacgattttcgggaaacatgacacgattttcgccttgcagggcaag 37033715  T
Q  428 ttttcaggataaggttggt 446  Q
    |||||||||||||||||||    
T  37033714 ttttcaggataaggttggt 37033696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 10924865 - 10924992
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||  ||| |||||||||||||| ||||| | |||||||    
T  10924865 cgtgtcacgattttgcaatgtcgagaactgttttgcagggtacccaatcgtgacacgattttggaaaaatgtgacacgattttcggcttggtaggcaagt 10924964  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    |||||  |||| ||||||||||| ||||    
T  10924965 tttcaaaataaagttggtcataccttgg 10924992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 329 - 457
Target Start/End: Original strand, 3156509 - 3156637
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||| |||| ||||||||||||||| |||| | ||||||||||  | ||||||| || ||    
T  3156509 cgtgtcacgattttgcaatgttgagagctattttgcagggtgccaaatcgtgacacgattttgggaaaacataacacgatttttggtttgctggacacgt 3156608  T
Q  429 tttcaggataaggttggtcatacattggt 457  Q
    ||||||||||||||||||| ||| |||||    
T  3156609 tttcaggataaggttggtcgtaccttggt 3156637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 44454844 - 44454918
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44454844 ccaatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgggcaagttttcaagataaggttggt 44454918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 20762307 - 20762432
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||||| || ||||||||||||||  ||||| |||    
T  20762307 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttgg 20762406  T
Q  423 gcaag-ttttcaggataaggttggtc 447  Q
    ||||| ||||||||||||||||||||    
T  20762407 gcaagattttcaggataaggttggtc 20762432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 13604158 - 13604288
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||| ||||||||||  |||||| |||||| ||||||  ||| | |||| ||||||||||||| |||| ||||||| ||||||| | ||||||||  |    
T  13604158 atcgtggcacgattttgtgatgtcgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggtta 13604257  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  13604258 agttttcaggataaggttggtcgtaccttgg 13604288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 193067 - 193163
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||| ||||||||||||| |||||||  |||||||| || |||||| |||||||||||||||||| |||||||| |||||| ||| ||||    
T  193067 tttgcagggtgtccaatcatgacacaattttggaaaaacgtgataccattttcggcttgctgggcaagtttttaggataagattggtcgtaccttgg 193163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 3188992 - 3189111
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||| |||||| || || | |||||| |||||| |||||||| ||||||||||||||||||  |||||||||||||    
T  3188992 cgtgtcacgattttggtaatgtcgagagttgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaag 3189090  T
Q  428 -ttttcaggataaggttggtc 447  Q
     |||| |||||||||||||||    
T  3189091 ttttttaggataaggttggtc 3189111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 3197809 - 3197928
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||| |||||| || || | |||||| |||||| |||||||| ||||||||||||||||||  |||||||||||||    
T  3197809 cgtgtcacgattttggtaatgtcgagagttgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaag 3197907  T
Q  428 -ttttcaggataaggttggtc 447  Q
     |||| |||||||||||||||    
T  3197908 ttttttaggataaggttggtc 3197928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 3206627 - 3206746
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||| |||||| || || | |||||| |||||| |||||||| ||||||||||||||||||  |||||||||||||    
T  3206627 cgtgtcacgattttggtaatgtcgagagttgtttt-cagggcgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctgggcaag 3206725  T
Q  428 -ttttcaggataaggttggtc 447  Q
     |||| |||||||||||||||    
T  3206726 ttttttaggataaggttggtc 3206746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 3282237 - 3282138
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||| ||||| || |||||||||| | |||||||||||||||||| | ||||||||| | ||||||| ||||||||||||||||| ||||    
T  3282237 gtttttcaaggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaacttgctgggtacgttttcaagataaggttggtcataccttgg 3282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 28223926 - 28223860
Alignment:
Q  351 gagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagctt 417  Q
    |||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  28223926 gagaactgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctt 28223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 28220726 - 28220665
Alignment:
Q  356 ctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagctt 417  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  28220726 ctgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttcggctt 28220665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 364 - 456
Target Start/End: Complemental strand, 37070292 - 37070199
Alignment:
Q  364 caaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| ||||| || |||||||||||| |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  37070292 caaggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 37070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 11348080 - 11348136
Alignment:
Q  285 tgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacacgattt 341  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  11348080 tgttgaggatgactctcaatttggtgttttggaaaatttggaatcgtgacacgattt 11348136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 19360975 - 19361090
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||| | |||||| |  |    
T  19360975 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgtta 19361074  T
Q  426 agttttcaggataagg 441  Q
    ||||| ||||||||||    
T  19361075 agtttccaggataagg 19361090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 19365831 - 19365917
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  19365831 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttca 19365917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 29135762 - 29135819
Alignment:
Q  399 gtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  29135762 gtgacatgattttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgg 29135819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 26644436 - 26644522
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||| ||||||||||| ||||||  |||||| |||||| |||| | |||| || |||||||||| | |||||||||||||||||||    
T  26644436 atcgtaacacgattttgtaatgtcatgagctggtttgcacggtgtcaaatcgtggcacgattttgtgaaaacgtgacacgattttca 26644522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 1833163 - 1833291
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggca-ag 427  Q
    |||| |||||||| |||||| || ||| |||||||||   || |||||  ||||||||||||||| |||| | ||||||||||  |||||||| | | |     
T  1833163 cgtgtcacgatttcgcaatgccgtgagttgttttgcagattgtccaatggtgacacgattttgggaaaacataacacgatttttggcttgctgagtacat 1833262  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||||||||||||||| ||||    
T  1833263 ttttcaagataaggttggtcataccttgg 1833291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 13598904 - 13598832
Alignment:
Q  385 gattttggggaaacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| ||| |||||||||||||||  ||||||||| | ||||||||||||||||||||| ||| ||||    
T  13598904 gattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 13598832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 30476905 - 30476857
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  30476905 cgtgacacgattttcggtttgctgggcaagttttcaagataaggttggt 30476857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 51765048 - 51765136
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||| ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||| ||| |||| |||||||||||||    
T  51765048 ttgacatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 51765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 13316776 - 13316717
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  13316776 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 13316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 4553175 - 4553060
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||| |||||| || || | ||||||||| |||  |||||| ||||||||||||| | |||||||| | |||||||  |||| | | || |    
T  4553175 cgtgtcacgatttcgcaatgccgtgaacatgttttgcagggtatccaatcgtgacacgattttgagaaaacgtgatatgattttcgacttgtttgacacg 4553076  T
Q  428 ttttcaggataaggtt 443  Q
    ||||||||||||||||    
T  4553075 ttttcaggataaggtt 4553060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 16124250 - 16124325
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| || |||||||||||||||||| | |||  |||| | ||||||||||||||||||||| ||| ||||    
T  16124250 cacgattttcggaaaacgtgacacgattttcaaactttttgggtacgttttcaggataaggttggtcgtaccttgg 16124325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 13547763 - 13547706
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||||||| ||| ||||    
T  13547763 cgtgacacaattttcagcttgctgggcacgttttca-aataaggttggtcgtaccttgg 13547706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 13549674 - 13549617
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||||||| ||| ||||    
T  13549674 cgtgacacaattttcagcttgctgggcacgttttca-aataaggttggtcgtaccttgg 13549617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 21536175 - 21536236
Alignment:
Q  396 aacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||  ||||||||| | ||||||||||| ||||||||| ||| ||||    
T  21536175 aacgtgacacgattttcaaacttgctgggtacgttttcaggatgaggttggtcgtaccttgg 21536236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 2209144 - 2209262
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  2209144 cgtgtcacgattttgcaatgtcgagagctgttttgcagagtgcccaatcgtgacacgattttggggaaacgtgacacgattttcggtttgctaggcaagt 2209243  T
Q  429 tttcaggataaggttggtc 447  Q
    |||||||||||||||||||    
T  2209244 tttcaggataaggttggtc 2209262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 26176150 - 26176032
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| | |||||| |||||||| |||||||||||||||||| ||||| |||||||||    
T  26176150 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaaccgtgacacaattttgggaaaacgtgacacgattttcggcttgatgggcaagt 26176051  T
Q  429 tttcaggataaggttggtc 447  Q
    |||||||||||||||||||    
T  26176050 tttcaggataaggttggtc 26176032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 6655379 - 6655507
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||||||| || |||| ||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||    
T  6655379 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaag 6655478  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||||||||    
T  6655479 ttttcaggataaggttggtcgtacattgg 6655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 46570270 - 46570143
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||||| |||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||| |||||| ||||||||||||| |    
T  46570270 cgtgtcacgattttgaaatgtcgagagctgttctgcagggtgcccaatcgtgacaagattttgggaaaacgtgacacaattttcggcttgctgggcaaat 46570171  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||| ||||    
T  46570170 tttcaggataaggttggtcgtactttgg 46570143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 37740268 - 37740395
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||| ||||||| |||||||| | ||||||||||| | ||||||||||||| |||||||||| ||||||| |||||| ||||||||    
T  37740268 cgtgtcacgattttgcaacgtcgagaactgttttgtagggtgcccaatcgtaacacgattttgggaaaacgtgacatgattttcggcttgcagggcaagt 37740367  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||| ||||    
T  37740368 tttcaggataaggttggtcgtaccttgg 37740395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 6742953 - 6743080
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||| ||||||||||||||| || |||||| |||| || |||| ||||||| ||||||||||||||||| | |||| |||||| ||    
T  6742953 cgtgtcacgattttgcaacgtcgagagctgtttttcagggtgcctaatcgtggcacgtttttgggaaaacgtgacacgattttaaacttgttgggcacgt 6743052  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||| ||||    
T  6743053 tttcaggataaggttggtcgtaccttgg 6743080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 26363727 - 26363816
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  26363727 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcataccttgg 26363816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 5429321 - 5429449
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||||||||||| |||||| ||||||||| |||| | |||| ||||||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  5429321 cgtgtcacgattttgcaatgttgagagcatgttttgcagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattttcagcttgttggacaag 5429420  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||| ||||    
T  5429421 ttttcaggttaagattggtcgtaccttgg 5429449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 56179156 - 56179032
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||| ||||||||| || || | |||||| ||||||||||||||| |||||||||| ||||||  |||||||||    
T  56179156 gaaatcgtgacacgattttggtaatgtcgaaagctgtttt-cagggcgtccaatcgtgacacgattttgggaaaacgtgacatgatttttggcttgctgg 56179058  T
Q  423 gcaag-ttttcaggataaggttggtc 447  Q
    ||||| ||||||||||||||||||||    
T  56179057 gcaagattttcaggataaggttggtc 56179032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 447
Target Start/End: Complemental strand, 5370607 - 5370483
Alignment:
Q  325 aaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctggg 423  Q
    |||||||||||||||||||  ||||||||||| |||||| || || | |||||| ||||||||||||||| || ||||||||||||||  ||||||||||    
T  5370607 aaatcgtgacacgattttggtaatgtcgagagatgtttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctggg 5370508  T
Q  424 caag-ttttcaggataaggttggtc 447  Q
    ||||  |||||||||||||||||||    
T  5370507 caagactttcaggataaggttggtc 5370483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 353 - 456
Target Start/End: Complemental strand, 12745919 - 12745815
Alignment:
Q  353 gagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagtttt-caggataaggttggtcatac 451  Q
    ||||||||| ||| |||| |||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||    
T  12745919 gagctgtttggcagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttccaggataaggttggtcgtac 12745820  T
Q  452 attgg 456  Q
     ||||    
T  12745819 cttgg 12745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 357 - 447
Target Start/End: Complemental strand, 9927959 - 9927869
Alignment:
Q  357 tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||||| ||||  ||||| ||||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9927959 tgttttgcagggtgttcaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaagttttcaggataaggttggtc 9927869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 52095872 - 52095759
Alignment:
Q  343 gcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataagg 441  Q
    |||||||| |||| |||||| || |||| |||||| ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  52095872 gcaatgtcaagagttgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagattttcaggataagg 52095774  T
Q  442 ttggtcatacattgg 456  Q
    |||||| ||| ||||    
T  52095773 ttggtcgtaccttgg 52095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 5143826 - 5143701
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgca-aggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctg 421  Q
    |||||||||||||||||||||||||||| |||||| ||||||  |||| |||||| || |||||||||| | ||| |||||||||||||| | |||| ||    
T  5143826 gaaatcgtgacacgattttgcaatgtcgtgagctggtttgcaggggtgaccaatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttgttg 5143727  T
Q  422 ggcaagttttcaggataaggttggtc 447  Q
    || | |||||||||||||||||||||    
T  5143726 ggtacgttttcaggataaggttggtc 5143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 34570890 - 34570823
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  34570890 tgacacgattttgggaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggt 34570823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 36314812 - 36314895
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  36314812 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgg 36314895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 36329021 - 36329104
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  36329021 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgg 36329104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 5148237 - 5148109
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaag 427  Q
    ||||||||||||||||||||||| |||||  |||||| |||| |||||| || |||||||||| | |||| ||||||||||||| | ||| ||||  | |    
T  5148237 cgtgacacgattttgcaatgtcgtgagctagtttgcagggtgaccaatcgtggcacgattttgtgaaaacttgacacgattttcaaacttactggatacg 5148138  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||| ||||    
T  5148137 ttttcaggataaggttggtcgtaccttgg 5148109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 360 - 444
Target Start/End: Original strand, 54882495 - 54882579
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    |||||| |||| |||||| ||||||||||||||| |||||||||||||||||| ||||| ||| || ||||||||||||||||||    
T  54882495 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgttggacacgttttcaggataaggttg 54882579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 41639033 - 41639116
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||| ||||    
T  41639033 caatcgtgacacgattttggaaaaacgtgacacgattttcaacttgttgggcacgttttcaggataaggttggtcgtaccttgg 41639116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 50674536 - 50674473
Alignment:
Q  383 acgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  50674536 acgattttgggaaaacgtgacatgattttcagcttgctgggcacgttttcaggataaggttggt 50674473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 2209080 - 2209138
Alignment:
Q  284 ttgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacacgatttt 342  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  2209080 ttgttgaggatgactctcaatttggtgttttggaaaacttggaatcgtgacacgatttt 2209138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 25861608 - 25861698
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaa-cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || |||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  25861608 ggtgctcaatcgtgtcacgattttgggaaaaacgtgacacgattttcaacttgctgggcatgttttcaggataaggttggtcgtaccttgg 25861698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 40630451 - 40630535
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||| ||||  ||||||| |||||||||||| ||| ||||    
T  40630451 ccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgctaggcacattttcagaataaggttggtcgtaccttgg 40630535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 8689079 - 8689162
Alignment:
Q  374 aatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| ||||||||||||||| |||||||||||||||||| | ||||||||| | ||||||||||||||||||||| ||| ||||    
T  8689079 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 8689162  T

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Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 12740041 - 12739946
Alignment:
Q  353 gagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    ||||||||||||| |||| |||| |  |||||||||||||| |||||| |||| |||||  |||||||||||||| ||||||||||||||||||||    
T  12740041 gagctgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtc 12739946  T

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Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 12748247 - 12748152
Alignment:
Q  353 gagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    ||||||||||||| |||| |||| |  |||||||||||||| |||||| |||| |||||  |||||||||||||| ||||||||||||||||||||    
T  12748247 gagctgttttgcagggtgtccaaccgcgacacgattttgggaaaacgtaacacaatttttggcttgctgggcaagtttttcaggataaggttggtc 12748152  T

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Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 13992816 - 13992701
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||| |  |||||| |||||| |||||| |||||| |||| ||||||||||||||| || ||||||||||||||| | |||||| |  |    
T  13992816 atcgtgacacgatttcgtgatgtcgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgtta 13992717  T
Q  426 agttttcaggataagg 441  Q
    |||||||| |||||||    
T  13992716 agttttcatgataagg 13992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 27417651 - 27417568
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||| | |||| | ||||||||||||||||||| ||| ||||    
T  27417651 caatcgtgacacgattttgggaaaacgtgacacgattttcaacttgttcggcacggtttcaggataaggttggtcgtaccttgg 27417568  T

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Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 447
Target Start/End: Original strand, 35661906 - 35661981
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||| ||||||||||||||| ||| ||| |||||||||| ||||| |||||| |||||||||||||||||||||    
T  35661906 ccaatcgtgacacgattttgggaaaatgtgtcacgattttcggcttgttgggcacgttttcaggataaggttggtc 35661981  T

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Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 5268766 - 5268865
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || ||||| ||||| || |||||||||||| |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  5268766 gtttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 5268865  T

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Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 54867694 - 54867611
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || ||| |||||||| ||||||||||||||||||| ||||||||||| |||||  |||||||||||||| ||| ||||    
T  54867694 caatcgtgtcacaattttgggaaaacgtgacacgattttcaacttgctgggcacgtttttcggataaggttggtcgtaccttgg 54867611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 54200363 - 54200305
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||    
T  54200363 cgtgacacgattttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgg 54200305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 457
Target Start/End: Complemental strand, 50263383 - 50263313
Alignment:
Q  387 ttttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattggt 457  Q
    ||||||| |||||| ||||||||||| ||||| |||| |||||||||| |||||||||||| ||| |||||    
T  50263383 ttttgggaaaacgtaacacgattttcggcttggtgggtaagttttcagaataaggttggtcgtaccttggt 50263313  T

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Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 3778077 - 3777980
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| |  ||||| || | ||||||| ||||||||||||| ||| ||||    
T  3778077 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcggtacgttttcaagataaggttggtcgtaccttgg 3777980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 24968802 - 24968879
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||| | || ||||||||||| || ||| |||| | || ||||||||||||||||||||| ||||||||    
T  24968802 tgacacgattttgtgcaatcgtgacacgatatttagcatgcttgacacgttttcaggataaggttggtcgtacattgg 24968879  T

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Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 46570334 - 46570294
Alignment:
Q  284 ttgttgaggatgactctcaatttggtggtttggaaaacttg 324  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  46570334 ttgttgaggatgactctcaatttggtgttttggaaaacttg 46570294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 31495839 - 31495756
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| |||||||||| |||| || |||||||||||||    
T  31495839 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 31495756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 52083115 - 52083056
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||    
T  52083115 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgg 52083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 52094122 - 52094063
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||    
T  52094122 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcataccttgg 52094063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 3909743 - 3909821
Alignment:
Q  334 cacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatttt 411  Q
    |||||||||||||||||| |||| ||||||||| |||| | |||| |||||||||||| || |||| |||||| |||||    
T  3909743 cacgattttgcaatgtcgtgagcatgttttgcacggtgtcaaatcgtgacacgatttttggaaaacatgacactatttt 3909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 447
Target Start/End: Complemental strand, 10047871 - 10047805
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||||||||| |||||||||||||||| | | |||| |||| | |||||||||||||||||||||    
T  10047871 cacgattttgggaaaacgtgacacgatttgcaaacttgatgggtacgttttcaggataaggttggtc 10047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 28468040 - 28468126
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||| |||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||||  || ||||||||||||||||    
T  28468040 atcgtaacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttca 28468126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 54200412 - 54200350
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| |||||| ||||||||||||    
T  54200412 cgtgtcacgattttggtaatgtcgagagctgttttgcagggtgtccaatcgtgacacgatttt 54200350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 16628440 - 16628493
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||||    
T  16628440 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttca 16628493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 5396272 - 5396344
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttg 444  Q
    ||||| || |||||||||||  |||||||||||||||||| | |||| |||| | ||||||||||||||||||    
T  5396272 caatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgttgggtatgttttcaggataaggttg 5396344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 30000931 - 30000881
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    ||||||||||||||  |||||||||||||| |||| |||||||||||||||    
T  30000931 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtc 30000881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 29254205 - 29254254
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||| ||||||| ||||| ||||||||| ||||| ||||||||||||    
T  29254205 cgtgacatgattttcggcttgttgggcaagtattcagaataaggttggtc 29254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 456
Target Start/End: Original strand, 16622887 - 16622959
Alignment:
Q  386 attttggggaaacgtgacacgattttc-agcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||||||||||||||||| | |||||| || | | |||||||||||||||||||| ||| ||||    
T  16622887 attttgggaaaacgtgacacgattttcaaacttgctaggtacgtttttcaggataaggttggtcgtaccttgg 16622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 6e-41; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 6360647 - 6360538
Alignment:
Q  338 attttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggat 437  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6360647 attttgcaatgtcgagagctgttttgcagggtgcccaattgtgacacgattttggggaaacgtgacacgattttcggcttgttgggcaagttttcaggat 6360548  T
Q  438 aaggttggtc 447  Q
    || |||||||    
T  6360547 aatgttggtc 6360538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 47674440 - 47674342
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  47674440 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 47674342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 47676633 - 47676535
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  47676633 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 47676535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 23554681 - 23554809
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  |||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  23554681 cgtgtcacgattttggtaatgtcgagagctgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaag 23554779  T
Q  428 -ttttcaggataaggttggtcatacattgg 456  Q
     |||||||||||||||||||| ||||||||    
T  23554780 tttttcaggataaggttggtcgtacattgg 23554809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 317 - 447
Target Start/End: Complemental strand, 2361696 - 2361565
Alignment:
Q  317 aaaacttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacga-ttttcagc 415  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| | | |||| |||| ||||||||||||||||||||||||||| | |||||       
T  2361696 aaaacttggaatcgtgacacgattttacaatgtcgagagctgttttgtaggatgccaaatcgtgacacgattttggggaaacgtgacacaatttttcgat 2361597  T
Q  416 ttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||| ||| |||| |||||||||||||||    
T  2361596 ttgctggacaaatttttaggataaggttggtc 2361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 4539077 - 4538950
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||||||||| || ||||||| | |||||| |||| ||||||||||||||| |||||||||||||||||| | |||||  ||||||    
T  4539077 cgtgtcacgattttgcaatgtcgatagttgttttgaagggtgcctaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgctaagcaagt 4538978  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||||||||| ||| ||||    
T  4538977 tttcaggacaaggttggtcgtaccttgg 4538950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 334 - 447
Target Start/End: Original strand, 29608181 - 29608295
Alignment:
Q  334 cacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacga-ttttggggaaacgtgacacgattttcagcttgctgggcaagttttc 432  Q
    |||||||||||||||||||||||| ||||||| |||| |||||| |||||||| ||||||||||| |||| || ||||||  |||| |||||||||||||    
T  29608181 cacgattttgcaatgtcgagagctattttgcagggtgtccaatcgtgacacgatttttggggaaaagtgatacaattttcgacttgttgggcaagttttc 29608280  T
Q  433 aggataaggttggtc 447  Q
    |||||||||||||||    
T  29608281 aggataaggttggtc 29608295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 48600022 - 48599932
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgc 419  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  48600022 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcacaatcgtgacacgattatggggaaacgtgacacgattttcggcttgc 48599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 456
Target Start/End: Original strand, 27347593 - 27347692
Alignment:
Q  356 ctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattg 455  Q
    |||||||||| ||||||||||| ||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||    
T  27347593 ctgttttgcagggtgcccaatcgtgacacgattttgggaaaac-tgacatgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttg 27347691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 4796206 - 4796334
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||| ||||||||| ||||| ||||| ||||||||||||||  ||||||||||||||||||| |||| |||||| |    
T  4796206 cgtgtcacgattttggtaatgtcgagagttgttttgcagggtgctcaatcgtgacacgattttggaaaaacgtgacacgattttcaacttgatgggcacg 4796305  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||  ||||||| ||| ||||    
T  4796306 ttttcaggatagagttggtcgtaccttgg 4796334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 4178410 - 4178544
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||||| || ||||||||||||||  ||||| | |    
T  4178410 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgttag 4178509  T
Q  423 gcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||||||||||||||| ||| ||||    
T  4178510 gcaagattttcaggataaggttggtcgtaccttgg 4178544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 21983804 - 21983674
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||||||||||||| |||||| |||||| |||| ||||||  | || ||||||| | |||||||||||||||||| | |||| |||| |    
T  21983804 atcgtgacacgattttgcaatgtcgtgagctggtttgcagggtgaccaatcgcggcatgattttgtgaaaacgtgacacgattttcaaacttgttgggta 21983705  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
     ||||||||||||||||||||| ||| ||||    
T  21983704 cgttttcaggataaggttggtcgtaccttgg 21983674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 337 - 456
Target Start/End: Original strand, 48489080 - 48489199
Alignment:
Q  337 gattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcagga 436  Q
    ||||| ||||||||| ||||||||||||| ||||  ||| | ||||||||||| ||| |||||||||||| ||||  |||||||||||| | || |||||    
T  48489080 gatttcgcaatgtcgtgagctgttttgcagggtgttcaaccgtgacacgatttagggaaaacgtgacacggtttttggcttgctgggcatgcttccagga 48489179  T
Q  437 taaggttggtcatacattgg 456  Q
    ||||||||||||||| ||||    
T  48489180 taaggttggtcataccttgg 48489199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 444
Target Start/End: Complemental strand, 21989468 - 21989351
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatttt-cagcttgctgggca 425  Q
    ||||||||||||||||||||||||| |||||| |||||| || | |||||| || ||||||||| | |||||||||||||||||| || |||| |||| |    
T  21989468 atcgtgacacgattttgcaatgtcgtgagctggtttgcagggcgaccaatcgtggcacgatttt-gtgaaacgtgacacgattttccaacttgatgggta 21989370  T
Q  426 agttttcaggataaggttg 444  Q
     ||||||||||||||||||    
T  21989369 cgttttcaggataaggttg 21989351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 2389754 - 2389843
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||||||||||| | ||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  2389754 ggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcagcttgctgggaacgttttcaggataaggttggtcgtaccttgg 2389843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 2647288 - 2647362
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  2647288 cacgattttgggaaaacgtgacatgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgg 2647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 447
Target Start/End: Complemental strand, 30026481 - 30026408
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  30026481 caatcgtgacatgattttggggaaacgtgacacgattttcagcttgccgggcacg-tttcaggataaggttggtc 30026408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 31733420 - 31733358
Alignment:
Q  385 gattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  31733420 gattttagggaaacgtgacacaattttcggcttgctgggcaagttttcaggataaggttggtc 31733358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 456
Target Start/End: Original strand, 19495628 - 19495740
Alignment:
Q  345 aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggcaag-ttttcaggataaggt 442  Q
    |||||||||||||||||| || |||| |||||| |||||| |||||||| ||||||| |||||||||  | ||||||||||||| |||||||||||||||    
T  19495628 aatgtcgagagctgtttt-cagggtgtccaatcgtgacacaattttgggaaaacgtgccacgattttttggcttgctgggcaagattttcaggataaggt 19495726  T
Q  443 tggtcatacattgg 456  Q
    ||||| ||| ||||    
T  19495727 tggtcgtaccttgg 19495740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 2761802 - 2761746
Alignment:
Q  334 cacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2761802 cacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgatttt 2761746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 32358537 - 32358465
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    |||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  32358537 ccaatcgtgatacgattttgggaaaacgtgacacaattttcagcttgctgggcacgttttcaggataaagttg 32358465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 43863946 - 43864030
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||||||||||||| |||||||||||||||||| | ||| | || ||||||||||||||||||||||| ||| ||||    
T  43863946 ccaatcgtgacacgattttgggaaaacgtgacacgattttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgg 43864030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 2761759 - 2761701
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  2761759 cgtgacacgattttcagcttgctgggcaagttttcaggataagattggtcgtaccttgg 2761701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 18126316 - 18126413
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| || |||||||||||  |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||    
T  18126316 gttttgcagggtgtccaatcgtg-cacgattttggaaaaacgtgatacgattttcggcttgttgggcaagttttcaggataatgttggtcgtaccttgg 18126413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 26417005 - 26417082
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||||||||||||| || ||| ||| |||||||||||| ||||||||||| ||| ||||    
T  26417005 tgacacgattttggggaaatgtgacacgatttttagtttgttggacaagttttcagggtaaggttggtcgtaccttgg 26417082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 47264204 - 47264083
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||||| ||||||| |||||| |||| | |||| | |||| || ||| ||| || | || ||||||||||||||| | ||||||||  |    
T  47264204 atcgtgacacgattttgtaatgtcgtgagctggtttgtagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggtta 47264105  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  47264104 agttttcaggataaggttggtc 47264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 14070316 - 14070232
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||||||| ||||||||||||||||||  |||||| |||||| |||||| ||||||||||||| ||| ||||    
T  14070316 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgg 14070232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 14380344 - 14380260
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||||||| ||||||||||||||||||  |||||| |||||| |||||| ||||||||||||| ||| ||||    
T  14380344 caatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgg 14380260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 4585831 - 4585930
Alignment:
Q  357 tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| |||| |||||| |||||| |||||||| |||||||||| ||||||  ||||| |||| |||||||||  |||||||||||| ||| ||||    
T  4585831 tgttttgcagggtgtccaatcgtgacactattttgggaaaacgtgacaagatttttggcttgttgggtaagttttcaatataaggttggtcgtaccttgg 4585930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 2479897 - 2479767
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||||  |||| || |||||| |||||| |||| | |||| || |||||||||| | || ||| ||||||||||| | |||| |||  |    
T  2479897 atcgtgacacgattttctaatgccgtgagctggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggtta 2479798  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  2479797 agttttcaggataaggttggtcgtaccttgg 2479767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 25767483 - 25767397
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||||||||| || ||||||||||||||||    
T  25767483 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttca 25767397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 33332041 - 33332115
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||  ||||||||||||||||||| |||||||||||  |||||| ||||||||||||| ||| ||||    
T  33332041 cacgattttggaaaaacgtgacacgattttcaacttgctgggcacattttcaagataaggttggtcgtaccttgg 33332115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 39730996 - 39731079
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||| |||| |||||||||||||    
T  39730996 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 39731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 49092220 - 49092122
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| ||| |||||||||||||| | ||||||||| | | |||||||||||||||||||| ||| ||||    
T  49092220 tttgcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgctgggtacgtttttcaggataaggttggtcgtaccttgg 49092122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 48408461 - 48408544
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||| | || |||||||||||||    
T  48408461 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgattt 48408544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 1113367 - 1113425
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| || || ||||||| |||||||||||||||||||| ||| ||||    
T  1113367 cgtgacacgattttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgg 1113425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 18409336 - 18409254
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatt 409  Q
    |||||||||||||||||   || || |||||| |||||| |||||| |||||||||||||| ||| | || ||||||||||||    
T  18409336 atcgtgacacgattttgtggtgccgtgagctggtttgcagggtgccaaatcatgacacgatcttgagaaatcgtgacacgatt 18409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 21646580 - 21646494
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||| ||||  || ||||||||||||||||    
T  21646580 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttca 21646494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 48491241 - 48491302
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||| ||||| || ||||||||| ||||||||||||| |||| |||||| ||||||||||||    
T  48491241 cgtgtcacgaattcgcaatgtcgtgagctgttttgcagggtgtccaatcgtgacacgatttt 48491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 48600086 - 48600029
Alignment:
Q  284 ttgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacacgattt 341  Q
    |||| ||||||| |||  ||||||||| ||||||||||||| ||||||||||||||||    
T  48600086 ttgtagaggatggctcaaaatttggtgttttggaaaacttggaatcgtgacacgattt 48600029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 456
Target Start/End: Complemental strand, 79913 - 79821
Alignment:
Q  366 aggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggcaagtttt-caggataaggttggtcatacattgg 456  Q
    |||||| ||||| || |||||||||||  ||| |||||| ||||||||  ||||||||| | ||||| |||||||||||||||| ||||||||    
T  79913 aggtgctcaatcgtgtcacgattttggaaaaatgtgacaagattttcaaacttgctgggtacgtttttcaggataaggttggtcgtacattgg 79821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 24515218 - 24515159
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  24515218 cgtgacacaatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 24515159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 43504658 - 43504575
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| |||||||||  |||| || |||||||||||||    
T  43504658 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgattt 43504575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 46515915 - 46515965
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtca 448  Q
    |||| |||||||||  ||||| |||||| ||||||||||||||||||||||    
T  46515915 cgtgtcacgatttttggcttgttgggcacgttttcaggataaggttggtca 46515965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 29608109 - 29608161
Alignment:
Q  281 aagttgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtga 333  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
T  29608109 aagttgttaaggatgactcaaaatttggtgttttggaaaactttgaatcgtga 29608161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 30814229 - 30814288
Alignment:
Q  284 ttgttgaggatgactctcaatttggtggtttggaaaa-cttgaaatcgtgacacgattttg 343  Q
    ||||||||||||||||  |||||||| ||||||||||  ||| ||||||||||||||||||    
T  30814229 ttgttgaggatgactcaaaatttggt-gtttggaaaatgttggaatcgtgacacgattttg 30814288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 35853626 - 35853682
Alignment:
Q  401 gacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||  |||||||||||||| ||||||||||||||| |||| ||| ||||    
T  35853626 gacacgatttttggcttgctgggcaagtttttcaggataaggtcggtcgtaccttgg 35853682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 2837370 - 2837243
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| ||||||||||||||||| ||||| |||||||| |||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  2837370 cgtgtcacgattttgcaatgtcaagagcggttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaccttgctgggtaagt 2837271  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||| ||| ||||    
T  2837270 tttcaggataaggttggtcgtaccttgg 2837243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 266
Target Start/End: Original strand, 31677514 - 31677744
Alignment:
Q  33 accaatgtactatcagagaacaatcgcgtagggtaattcatcgaggtaagagcctaagaggaactcgtttaagagttgacttcttccaacttaatgnnnn 132  Q
    ||||| |||||||| ||  ||||| | | ||||||||||||||| |||| | |||||||||||||| ||||| ||||||||||| ||||||| |||        
T  31677514 accaacgtactatctgatcacaattgtggagggtaattcatcgaagtaaaaacctaagaggaactcatttaaaagttgacttctcccaacttgatgtttt 31677613  T
Q  133 nnncatttacactgttaagagattagacctctttatcaaattgttaagaatcaaagtatctactacttgtttcacatcatcttgttggtaagggtactat 232  Q
       ||  |||| ||||||||||||||||||||  ||||||||||||| |||||| ||||| |||| || | ||||||||||||||||||| |  ||||||    
T  31677614 tt-caagtacattgttaagagattagacctctg-atcaaattgttaaaaatcaatgtatc-actatttatgtcacatcatcttgttggtatgattactat 31677710  T
Q  233 atttagctagagtgaacatgtgtaaatttctcta 266  Q
    |||||||| ||||||||||||||||| |||||||    
T  31677711 atttagctggagtgaacatgtgtaaacttctcta 31677744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 36318537 - 36318417
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgatttt-ggggaaacgtgacacgattttcagcttgctgggcaa 426  Q
    |||| |||||||| |||||||||||||| ||||||||| |||| |||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||     
T  36318537 cgtgtcacgatttcgcaatgtcgagagcatgttttgcagggtgtccaatcgtgacacgatttttggggaaacgtgacacgattttcggcttgctggccac 36318438  T
Q  427 gttttcaggataaggttggtc 447  Q
    |||||||||||||||||||||    
T  36318437 gttttcaggataaggttggtc 36318417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 31630037 - 31629942
Alignment:
Q  33 accaatgtactatcagagaacaatcgcgtagggtaattcatcgaggtaagagcctaagaggaactcgtttaagagttgacttcttccaacttaatg 128  Q
    |||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  31630037 accaatgtactatcagagcacaattgcggagggtaactcatcgaggtaagagcctaagaggaactaatttaagagttgacttctcccaacttaatg 31629942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 36988602 - 36988474
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  |||||||||||||||||| || |||| |||||| ||||| ||||||||| ||||||||||||||||||  |||||||||||||    
T  36988602 cgtgtcacgattttggtaatgtcgagagctgtttt-cagggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcgacttgctgggcaag 36988504  T
Q  428 -ttttcaggataaggttggtcatacattgg 456  Q
     |||||||||||||||||||| ||| ||||    
T  36988503 tttttcaggataaggttggtcgtaccttgg 36988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 446
Target Start/End: Original strand, 29867521 - 29867639
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||||||||||||||  ||||||||||| |||||| || |||| |||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  29867521 cgtgacacgattttggtaatgtcgagagttgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcgacttgctgggcaag 29867619  T
Q  428 -ttttcaggataaggttggt 446  Q
     |||||| ||||||||||||    
T  29867620 tttttcaagataaggttggt 29867639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 34389410 - 34389282
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaa 426  Q
    |||| ||||||||||  ||||||||||| |||||| || |||| |||||| ||||||||||||||| |||||||||||||||||| | ||||||||| |     
T  34389410 cgtgtcacgattttggtaatgtcgagagttgtttt-cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgggtac 34389312  T
Q  427 gttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||||| ||| ||||    
T  34389311 gttttcaggataaggttggtcgtaccttgg 34389282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 20522752 - 20522654
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || ||||| ||||| || |||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  20522752 gtttttcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtaccttgg 20522654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 28258710 - 28258843
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    |||||||||||||||||||| |||| || |||||| |||||| |||| | |||| || ||| |||||| | || ||||||||||||||| | ||||||||    
T  28258710 gaaatcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctgg 28258809  T
Q  423 gcaagttttcaggataaggttggtcatacattgg 456  Q
      ||||||||||||||||||||||| ||| ||||    
T  28258810 ttaagttttcaggataaggttggtcgtaccttgg 28258843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 358 - 447
Target Start/End: Original strand, 39284568 - 39284657
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||| ||| |||| || ||| ||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  39284568 gtttcgcagggtgtcctatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggaaagttttcaggataaggttggtc 39284657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 6595526 - 6595406
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||| ||||||||||  ||| |||| ||||||||| || |||| |||||| |||||| |||||||| |||||||||||||||||  |||||||||    
T  6595526 gaaatcgtgtcacgattttggtaatatcgatagctgtttt-cagggtgtccaatcgtgacacaattttgggaaaacgtgacacgatttttggcttgctgg 6595428  T
Q  423 gcaag-ttttcaggataaggtt 443  Q
    || || ||||||||||||||||    
T  6595427 gctagattttcaggataaggtt 6595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 21630466 - 21630377
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || ||| |||||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  21630466 ggtgctcaatcgtgtcacaattttgggaaaacatgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgg 21630377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 45099390 - 45099515
Alignment:
Q  324 gaaatcgtgacacgattttgcaat-gtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    |||||||||||||||||| |  || ||||||||||| |||  | |||| |||||| |||||| |||||||| ||  |||||||||||||  |||||||||    
T  45099390 gaaatcgtgacacgatttcggtattgtcgagagctggtttttagggtgtccaatcgtgacacaattttgggaaattgtgacacgatttttggcttgctgg 45099489  T
Q  423 gcaag-ttttcaggataaggttggtc 447  Q
    ||||| ||||||||||||||||||||    
T  45099490 gcaagattttcaggataaggttggtc 45099515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 14698600 - 14698674
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||  |||||||||||||||||||| ||| ||||    
T  14698600 cacgattttgggaaaacgtgacacgattttcaacttgttgggcacattttcaggataaggttggtcgtaccttgg 14698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 17865699 - 17865609
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||| | ||||||||| | ||||||||||||||||||||| ||| ||||    
T  17865699 ggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 17865609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 39483407 - 39483308
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || ||||| ||||| || |||||||||||| |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  39483407 gtttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 39483308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 31629924 - 31629840
Alignment:
Q  176 ttaagaatcaaagtatctactacttgtttcacatcatcttgttgg--taagggtactatatttagctagagtgaacatgtgtaaa 258  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  || ||||||||||||||||| || | ||||||| ||||    
T  31629924 ttaagaatcaaagtatctactacttgtattacatcatcttgttagtatatgggtactatatttagcttgactaaacatgtttaaa 31629840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 444
Target Start/End: Original strand, 33528192 - 33528277
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttg 444  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| | ||||||||| | |||||||| |||||||||    
T  33528192 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgggtacgttttcagaataaggttg 33528277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 28446384 - 28446440
Alignment:
Q  285 tgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacacgattt 341  Q
    ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||    
T  28446384 tgttgaggatgtctctcaatttggtgttttgaaaaacttggaatcgtgacacgattt 28446440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 441
Target Start/End: Original strand, 30832979 - 30833099
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgct 420  Q
    |||| ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||| | ||||||    
T  30832979 ttgacatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgct 30833078  T
Q  421 gggcaagttttcaggataagg 441  Q
     |  |||||| ||||||||||    
T  30833079 cgttaagtttccaggataagg 30833099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 32289211 - 32289294
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||| |||| |||||||||||||    
T  32289211 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcttgacacgatcttgaggaatcgtgacacgattt 32289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 40739394 - 40739279
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||| ||||  ||||||| |||||| | |||||| |  |    
T  40739394 atcgtgacacgattttgttatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgtta 40739295  T
Q  426 agttttcaggataagg 441  Q
    ||||||||||||||||    
T  40739294 agttttcaggataagg 40739279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 3492314 - 3492232
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatt 409  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||||||||    
T  3492314 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgatt 3492232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 447
Target Start/End: Original strand, 23078062 - 23078128
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||||||||| |||||||||||||||||| | |||| |||| | |||||||||||||||||||||    
T  23078062 cacgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtc 23078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 25410203 - 25410117
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    |||||||||||||||||  ||| || ||| || |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  25410203 atcgtgacacgattttgtgatgccgtgagatggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttca 25410117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 17863872 - 17863953
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    |||| |||||| |||||  |||||||| |||||||||||||||||   ||||||||||||| |||| |||||||||||||||    
T  17863872 ggtgtccaatcgtgacataattttgggaaaacgtgacacgattttttacttgctgggcaagtttttgaggataaggttggtc 17863953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 2334875 - 2334816
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  2334875 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 2334816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 4503590 - 4503531
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  4503590 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 4503531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 10706843 - 10706918
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||| |||||||||||||||||| | ||||||||  | ||||| ||||||||||||||| ||| ||||    
T  10706843 cacgattttgggaaaacgtgacacgattttcaaacttgctggatacgttttaaggataaggttggtcgtaccttgg 10706918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 33118665 - 33118578
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttgg 445  Q
    ||||| || ||||| ||||| || |||| |||| || ||||||||||| ||||||| |||||||||||  |||||| |||||||||||    
T  33118665 gtttttcagggtgctcaatcgtgtcacgtttttaggaaaacgtgacacaattttcaacttgctgggcacattttcaagataaggttgg 33118578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 38311996 - 38312059
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttg 391  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  38311996 cgtgtcacgattttggtaatgtcgagagctgttttgcagggtgtccaatcgtgacacgattttg 38312059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 6266332 - 6266420
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||| |||||||||| |||| |  ||| || |||||| |||||| |||||| |||| |||||||||| |||| || |||||||||||||    
T  6266332 ttgacatcgtgacacaatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 6266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 4503644 - 4503577
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||    
T  4503644 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgatttt 4503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 5723712 - 5723653
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  ||||||||| |||| |||||||||||||||||||| ||| ||||    
T  5723712 cgtgacacgatttttggcttgctggacaagattttcaggataaggttggtcgtaccttgg 5723653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 35447575 - 35447512
Alignment:
Q  381 acacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    ||||||||||||| ||| ||||||||||| || | |||  ||||||||||||| ||||||||||    
T  35447575 acacgattttgggaaaatgtgacacgattatcggtttgtcgggcaagttttcaagataaggttg 35447512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 36206123 - 36206064
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||||||||| ||| ||||    
T  36206123 cgtgacacgatttttggcttgctgggaaagattttcaggataaggttggtcgtaccttgg 36206064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 28446447 - 28446493
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaa 375  Q
    |||| ||| ||||||||||||||| |||||||||||| |||||||||    
T  28446447 cgtgtcacaattttgcaatgtcgatagctgttttgcacggtgcccaa 28446493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 8389738 - 8389803
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaag-ttttcaggataaggttgg 445  Q
    |||||||||||| |||||||||||||||||| | ||||||| | | | ||||||||||||||||||    
T  8389738 cacgattttgggaaaacgtgacacgattttcaaacttgctgagtacgtttttcaggataaggttgg 8389803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 10981 - 11109
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||||||| || |||| ||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||    
T  10981 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttcggtttgctgggcaag 11080  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||||||||    
T  11081 ttttcaggataaggttggtcgtacattgg 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 42435736 - 42435608
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||||||| || |||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  42435736 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattttcgtcttgcttggcaag 42435637  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||| ||||    
T  42435636 ttttcaggataaggttggtcgtaccttgg 42435608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 447
Target Start/End: Original strand, 27810956 - 27811058
Alignment:
Q  345 aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttg 444  Q
    ||||||||||||| ||||||| |||| |||||| ||||||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  27810956 aatgtcgagagctattttgcagggtgtccaatcgtgacacgattttgagaaaatgtgacacgattttcggcttgctgggcaagttttcaggataaggttg 27811055  T
Q  445 gtc 447  Q
    |||    
T  27811056 gtc 27811058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 12703165 - 12703038
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||| ||||||||||| |||||| ||  ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||    
T  12703165 cgtgtcacgattttgctaatgtcgagagttgtttt-cagagtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgctaagcaag 12703067  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
     ||||||||||||||||||| ||||||||    
T  12703066 ctttcaggataaggttggtcgtacattgg 12703038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 326 - 444
Target Start/End: Original strand, 43036061 - 43036180
Alignment:
Q  326 aatcgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    |||||||||||||||| |||||| || |||| ||||||||| |||| |||||| ||||||||||||||  ||||||||||||||||||  |||| |||||    
T  43036061 aatcgtgacacgatttcgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttcgacttgttgggc 43036160  T
Q  425 aagttttcaggataaggttg 444  Q
    ||||||||||||||||||||    
T  43036161 aagttttcaggataaggttg 43036180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 15212457 - 15212555
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||    
T  15212457 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggttggtcgtaccttgg 15212555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 456
Target Start/End: Complemental strand, 1746748 - 1746617
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    ||||||||||||||||||  |||||||||||||||||| || || | |||||| ||||||||||||||| || ||||||||||||||  |||||||||||    
T  1746748 aatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggc 1746650  T
Q  425 aag-ttttcaggataaggttggtcatacattgg 456  Q
    ||| |||||||||||||||||||| ||| ||||    
T  1746649 aagattttcaggataaggttggtcgtaccttgg 1746617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 30142983 - 30143111
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||| ||||| ||| |||| ||||||||| |||| |||||| ||||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  30142983 cgtgtcacgatttcgcaatttcgtgagcatgttttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttcggcttgctggacaag 30143082  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||| ||||||||||||||| ||| ||||    
T  30143083 ttttaaggataaggttggtcgtactttgg 30143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 22975996 - 22976085
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||    
T  22975996 ggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcagcttgcttgacaagttttcaggataaggtttgtcgtacattgg 22976085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 4731300 - 4731427
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||| ||||||||| |||||||||| || |||| |||||| ||||||||||||||| |||| ||||| ||||||| ||||||||| || ||    
T  4731300 cgtgtcacgatttcgcaatgtcgtgagctgttttacagggtgtccaatcgtgacacgattttgggaaaacatgacatgattttcggcttgctggacacgt 4731399  T
Q  429 tttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| |||||| ||| ||||    
T  4731400 tttcagaataagattggtcgtaccttgg 4731427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 456
Target Start/End: Complemental strand, 34254860 - 34254727
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    |||||||||||| |||||||  |||||||||||||||||| || || | | |||||||||||||||||||| || ||||||||||||||  | |||||||    
T  34254860 gaaatcgtgacatgattttggtaatgtcgagagctgtttt-cagggcgtctaatcatgacacgattttgggaaatcgtgacacgatttttggattgctgg 34254762  T
Q  423 gcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||||||||||||||| ||| ||||    
T  34254761 gcaagattttcaggataaggttggtcgtaccttgg 34254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 379 - 456
Target Start/End: Original strand, 11383480 - 11383557
Alignment:
Q  379 tgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  11383480 tgacacgattttgggaaaacgtgacacgattttcagcttgctgggcaaattttcaagataaggttggtcgtactttgg 11383557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 446
Target Start/End: Complemental strand, 34257036 - 34256913
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||||||| || || | |||||| ||||||||||||||| || ||||||||||||||  ||||||||     
T  34257036 gaaatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctga 34256938  T
Q  423 gcaag-ttttcaggataaggttggt 446  Q
    ||||| ||||||||||||| |||||    
T  34256937 gcaagattttcaggataagattggt 34256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 31217892 - 31218026
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||  ||||||||||||||| || ||||||||||||||  ||||| |||    
T  31217892 gaaatcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgatttttggcttgttgg 31217991  T
Q  423 gcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||| ||||||||||||||| ||| ||||    
T  31217992 gcaagatttttaggataaggttggtcgtaccttgg 31218026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 19945872 - 19945750
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||| ||| || || | |||||| |||||||||||| || || ||||||||||||||  ||||| |||    
T  19945872 gaaatcgtgacacgattttgataatgtcgagagctggttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgatttttggcttgttgg 19945773  T
Q  423 gcaag-ttttcaggataaggttg 444  Q
    | ||| |||||||||||||||||    
T  19945772 ggaagattttcaggataaggttg 19945750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 4733472 - 4733576
Alignment:
Q  334 cacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttca 433  Q
    |||||||| ||||||||| |||||||||| || ||||  ||||| ||||||||||||||| |||||||||||||||||| |||| ||   || |||||||    
T  4733472 cacgatttcgcaatgtcgtgagctgttttccagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttcggctttctaaacacgttttca 4733571  T
Q  434 ggata 438  Q
    |||||    
T  4733572 ggata 4733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 456
Target Start/End: Original strand, 42497853 - 42497984
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    ||||||||||||||||||  ||||||||||| |||||| || || | |||||| ||||||||||||||| ||  ||||||||||| |  |||||||||||    
T  42497853 aatcgtgacacgattttggtaatgtcgagagttgtttt-cagggcgtccaatcgtgacacgattttgggaaattgtgacacgattattggcttgctgggc 42497951  T
Q  425 aag-ttttcaggataaggttggtcatacattgg 456  Q
    ||| |||||||||||||||| ||| ||| ||||    
T  42497952 aagattttcaggataaggttagtcgtaccttgg 42497984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 447
Target Start/End: Complemental strand, 4743692 - 4743601
Alignment:
Q  357 tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    ||||||| | |||| |||||| ||||||||||||| ||||||||||||||||||||  |||||| |||| | ||||||||||||||||||||    
T  4743692 tgttttgaagggtgtccaatcgtgacacgattttgaggaaacgtgacacgattttcgacttgcttggcacgtttttcaggataaggttggtc 4743601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 40221231 - 40221302
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggtt 443  Q
    |||||| || |||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||    
T  40221231 ccaatcgtgtcacgattttgggaaaacgtgacacgattttcagcttgttggacacgttttcaggataaggtt 40221302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 4283039 - 4283097
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  4283039 cgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 4283097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 452
Target Start/End: Complemental strand, 1345889 - 1345774
Alignment:
Q  337 gattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcagg 435  Q
    |||||||||||| ||||||| |||| |||| ||||  ||||| ||||||||||| | | ||| ||||||| |||||||||||||| | || |||||||||    
T  1345889 gattttgcaatgccgagagcatgttctgcagggtgttcaatcgtgacacgattt-gagaaaatgtgacacaattttcagcttgcttgacacgttttcagg 1345791  T
Q  436 ataaggttggtcataca 452  Q
    |||||||||||| ||||    
T  1345790 ataaggttggtcgtaca 1345774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 5702046 - 5702145
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| ||||| ||||| || |||||||||||  |||||||||||||||||| | ||||||||| |  |||||||||||||||||||| ||| ||||    
T  5702046 gttttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacattttcaggataaggttggtcgtaccttgg 5702145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 19175308 - 19175398
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || |||||||||||| |||||||||| ||||||| | ||||||||| | |||||||||||||||||||| |||| ||||    
T  19175308 ggtgctcaatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgctgggtacgttttcaggataaggttggttataccttgg 19175398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 456
Target Start/End: Original strand, 10014802 - 10014928
Alignment:
Q  331 tgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagtt 429  Q
    |||||| ||||| | |||||| |||| |||||| || |||  |||||| ||||||||||||||| || | ||||||||||||  || |||| |||| |||    
T  10014802 tgacacaattttcctatgtcgtgagcatgtttttcagggtttccaatcgtgacacgattttgggcaatcatgacacgatttttggcatgcttggcacgtt 10014901  T
Q  430 ttcaggataaggttggtcatacattgg 456  Q
    | |||||||||||||||| ||| ||||    
T  10014902 tacaggataaggttggtcgtaccttgg 10014928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 7412889 - 7412768
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||| || |||| || |||||| |||||| |||| | |||| ||  || |||||| | || ||||||||||||||| | ||||||||  |    
T  7412889 atcgtgacacgattctgtaatgccgtgagctggtttgcagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggtta 7412790  T
Q  426 agttttcaggataaggttggtc 447  Q
    |||||||||||||| |||||||    
T  7412789 agttttcaggataacgttggtc 7412768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 2627381 - 2627464
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||  || |||||| |||||| |||||| |||| ||||||||||||||| || |||||||||||||    
T  2627381 atcgtgacacgatttcgtgattccgtgagctggtttgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgattt 2627464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 1261477 - 1261563
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||||||||||||| |  ||| || |||||  |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  1261477 atcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttca 1261563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 44303514 - 44303577
Alignment:
Q  326 aatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||| |||| |||||||||||||||||||| || || | |||||| ||||||||||||    
T  44303514 aatcgtgacacaatttggcaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgatttt 44303577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 17982363 - 17982422
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||||| ||| ||||    
T  17982363 cgtgacacgatttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgg 17982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 44303564 - 44303623
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| ||| |||||||||||||||| ||| ||||    
T  44303564 cgtgacacgatttttggcttgctgggcaagatttccaggataaggttggtcgtaccttgg 44303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 19948831 - 19948766
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||||  |||||||||||||| ||| || || | |||||| ||||||||||||    
T  19948831 aatcgtgacacgattttgataatgtcgagagctggttttcagggcgtccaatcgtgacacgatttt 19948766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 49200196 - 49200068
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||||||| || |||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |    
T  49200196 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacacgattttcggcttgctgggcatg 49200097  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||| ||||    
T  49200096 ttttcaggataaggttggtcgtaccttgg 49200068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 5258677 - 5258552
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||| ||| ||||| | |||||| ||||||||||||||| || ||||||||||||||  |||||||||    
T  5258677 gaaatcgtgacacgattttggtaatgtcgagagctggttttcaaggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgg 5258578  T
Q  423 gcaag-ttttcaggataaggttggtc 447  Q
    ||||| ||||||||||||||||||||    
T  5258577 gcaagattttcaggataaggttggtc 5258552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 446
Target Start/End: Original strand, 34490656 - 34490773
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagt 428  Q
    |||| |||||||| ||||||||||||| ||||||||| |||  |||||| ||||||||||||||  |||||||||||||||||| ||||  |||||||||    
T  34490656 cgtgtcacgatttcgcaatgtcgagagatgttttgcagggtatccaatcgtgacacgattttggaaaaacgtgacacgattttcggcttattgggcaagt 34490755  T
Q  429 tttcaggataaggttggt 446  Q
    ||||||||||||||||||    
T  34490756 tttcaggataaggttggt 34490773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 29812734 - 29812832
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||    
T  29812734 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttgtcttgctgggcaagttttcaggataaggttggtcgtaccttgg 29812832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 4569413 - 4569502
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  4569413 ggtgtccaatcgtgacatgattttgggaaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 4569502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 327 - 447
Target Start/End: Original strand, 33386200 - 33386321
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||||||| |||| ||||||||||||||| | ||||||||  |    
T  33386200 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggtta 33386299  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  33386300 agttttcaggataaggttggtc 33386321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 43402490 - 43402417
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43402490 caatcgtgacacgattttggagaaacgtgacacgattttcggcttgctgggcaagttttcaggataaggttggt 43402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 27985998 - 27986122
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    ||||||||||||||||||||  ||| || |||||| |||||| |||||| |||| |||||||||| || |||| ||||||||||||||| | ||||||||    
T  27985998 gaaatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctgg 27986097  T
Q  423 gcaagttttcaggataaggttggtc 447  Q
      |||||||||||||||||||||||    
T  27986098 ttaagttttcaggataaggttggtc 27986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 322 - 456
Target Start/End: Complemental strand, 37726241 - 37726106
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgct 420  Q
    |||| |||||||||||||||||  ||| || |||||| |||||| |||| | |||| ||||||||||||| |||| ||||||||||||||| | |||| |    
T  37726241 ttgatatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgtt 37726142  T
Q  421 gggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||  ||||||||||||||||||||||| ||||||||    
T  37726141 ggttaagttttcaggataaggttggtcgtacattgg 37726106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 43404433 - 43404350
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| ||||    
T  43404433 caatcgtgacacgattttggggaaacgtgacacgattttcggcttgctgagcaagttttcaggataaggtcggtcgtaccttgg 43404350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 45094800 - 45094933
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    ||||||||||||||||||||  |||||||||||||||||| || || | |||||| |||||| |||||||| || ||||||||||||||  ||||| |||    
T  45094800 gaaatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacaattttgggaaatcgtgacacgatttttggcttgttgg 45094898  T
Q  423 gcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||||||||||||||||||| ||| ||||    
T  45094899 gcaagattttcaggataaggttggtcgtaccttgg 45094933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 54593172 - 54593255
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| |||| | |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  54593172 caatcgtgactcaattttgggaaaacgtgacacgattttcaacttgctgggcacgttttcaggataaggttggtcgtacattgg 54593255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 456
Target Start/End: Complemental strand, 5236940 - 5236856
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||||| |||||||| |||||||||||||||||| |||||||||| |||||||||||||||| |||||| ||| ||||    
T  5236940 ccaatcgtgacacaattttgggaaaacgtgacacgattttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgg 5236856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 36018324 - 36018404
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| ||||| ||||||||||||||| ||||||||||| |||||| |||||||||||| ||||| |||||||||||||||    
T  36018324 ggtgctcaatcgtgacacgattttgggaaaacgtgacacaattttcggcttgctgggcacgtttttaggataaggttggtc 36018404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 40592353 - 40592436
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || |||||||||||| ||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||| ||||    
T  40592353 caatcgtgtcacgattttgggaaaacgtgacacgattttcaacttgctggacacgttttcaggataaggttggtcgtaccttgg 40592436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 55302664 - 55302582
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  55302664 caatcgtgacacgattt-gggaaaacgtgatacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 55302582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 7761949 - 7762033
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  7761949 ccaatcgtgacacgattttggg-aaacgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 7762033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 27453518 - 27453397
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||||||  ||| || |||||| |||| | |||||| |||| ||||| |||| || |||| ||||||||||||||| | ||||||||  |    
T  27453518 atcgtgacacgattttgtgatgccgtgagctggtttgtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggtta 27453419  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  27453418 agttttcaggataaggttggtc 27453397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 6096313 - 6096217
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||| |||||  ||||||||||||||| |||||||||||||||||| ||||  ||| ||| |||||||||||||||||||| ||| ||||    
T  6096313 tttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttcggcttattggacaaattttcaggataaggttggtcgtaccttgg 6096217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 345 - 456
Target Start/End: Original strand, 7764110 - 7764221
Alignment:
Q  345 aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggtt 443  Q
    |||| ||||||||||||| || || | |||||| ||||||||||||||| |||||||||||||||||  ||||| |||||||| |||| |||||||||||    
T  7764110 aatggcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgttgggcaagatttttaggataaggtt 7764208  T
Q  444 ggtcatacattgg 456  Q
    |||| ||| ||||    
T  7764209 ggtcgtaccttgg 7764221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 44331210 - 44331338
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||| ||||||| | |||  ||||||||  ||||  ||||| ||||||||||||||| ||| |||||||||||||  |||||||||| | |    
T  44331210 cgtgtcacgatttcgcaatgttgtgagtatgttttgctgggtgttcaatcgtgacacgattttgggaaaaagtgacacgatttttggcttgctgggtacg 44331309  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||| ||||    
T  44331310 ttttcaggataaggttggtcgtaccttgg 44331338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 31340749 - 31340659
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaa-cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||| ||||||||| ||| | ||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||    
T  31340749 ggtgtccaatcgtgacatgattttgggaaaaacatgacacgattttcggcttgttgggcaagttttcaggataaggttggtcgtaccttgg 31340659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 16264877 - 16264780
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| | || |||||| | ||||||||||||||||||||| ||| ||||    
T  16264877 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaactagctgggtacgttttcaggataaggttggtcgtaccttgg 16264780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 27038570 - 27038473
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| |||||||| |||||||||||| ||| |||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  27038570 tttgcagggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttgttgggtatgttttcaggataaggttggtcgtaccttgg 27038473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 447
Target Start/End: Original strand, 51398497 - 51398586
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||||| |||| |||||  ||||||||||||||| ||||||||||| |||||| | ||| |||||||||||| |||||| ||||||||    
T  51398497 gttttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacaattttcggtttgttgggcaagtttttaggatatggttggtc 51398586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 440
Target Start/End: Original strand, 3393244 - 3393360
Alignment:
Q  326 aatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc 424  Q
    ||||| ||||||||||||  |||||||||||||| |||  |  | | |||||| ||||||||||||||| || ||||||||||||||  |||||||||||    
T  3393244 aatcgcgacacgattttggtaatgtcgagagctggtttttagtgcgtccaatcgtgacacgattttgggaaatcgtgacacgatttttggcttgctgggc 3393343  T
Q  425 aag-ttttcaggataag 440  Q
    ||| |||||||||||||    
T  3393344 aagattttcaggataag 3393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 46173189 - 46173284
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||| |||||| ||||||||||||||| |||| |||||||| || | ||||| |||||| ||||||||||||||||||||| ||| ||||    
T  46173189 tttgcagggtgtccaatcgtgacacgattttgggaaaacatgacacga-ttccggcttgttgggcacgttttcaggataaggttggtcgtaccttgg 46173284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 26928143 - 26928258
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| |||||| || ||| |||| ||||||||||||||| | |||||| |  |    
T  26928143 atcgtgacacgattttgttatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgtta 26928242  T
Q  426 agttttcaggataagg 441  Q
    ||||||||||||||||    
T  26928243 agttttcaggataagg 26928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 32143887 - 32143769
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    ||||||||||||||||||||  ||| || |||||  |||||| |||||| |||| ||||||||| ||| |||| ||||||||||||||| | |||||| |    
T  32143887 gaaatcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcg 32143788  T
Q  423 gcaagttttcaggataagg 441  Q
      ||||||||| |||||||    
T  32143787 ttaagttttcaagataagg 32143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 40912805 - 40912879
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| ||| || |||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||| |||||    
T  40912805 caatcgtgatacaattttgggaaaacgtgacacgattttcggcttgttgggcaagttttctggataaggctggtc 40912879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 8370047 - 8370144
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| |  |||||||| | ||||| ||||||||||||||| ||| ||||    
T  8370047 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgctgggaacgtttttaggataaggttggtcgtaccttgg 8370144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 36029622 - 36029525
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||||  |||| || |||||||||||  |||||||||||||||||||  ||||||||| | ||||||||||||||||||||| ||| ||||    
T  36029622 tttgcagggtgcttaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 36029525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 48438722 - 48438657
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggt 446  Q
    ||||||||||||||||||||||||||||||| | |||| |||| | ||||||||||||||||||||    
T  48438722 cacgattttggggaaacgtgacacgattttcaaacttgatgggtacgttttcaggataaggttggt 48438657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 8127151 - 8127071
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| ||||| || |||||||||||| ||  ||||||||||||||| |||||| || | |||||||||||||||||||||    
T  8127151 ggtgctcaatcgtgtcacgattttgggaaagtgtgacacgattttcaacttgctaggtacgttttcaggataaggttggtc 8127071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 23198472 - 23198384
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||| |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||||| | |||| |||||||||||||    
T  23198472 ttgacatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgattt 23198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 455
Target Start/End: Complemental strand, 35926019 - 35925923
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattg 455  Q
    |||||| ||||| ||||| || ||||| |||| | |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| |||||||    
T  35926019 tttgcagggtgctcaatcgtgtcacgagtttgagaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtacattg 35925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 44331974 - 44331846
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||| |||||| || |||  ||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||  |||| ||||| | |    
T  44331974 cgtgtcacgatttcgcaatgccgtgagtatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgatttttggcttcctgggtacg 44331875  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||| ||| ||| ||||    
T  44331874 ttttcaagataaagttagtcgtaccttgg 44331846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 29810539 - 29810637
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| |||||||||||| |  ||||||  ||| |||||  ||||||||| ||| |||||||||||||||||||| ||| ||||    
T  29810539 gttttgcagggtgtccaatcgtgacacgattttagaaaaacgtagcacaatttttggcttgctggacaaattttcaggataaggttggtcgtaccttgg 29810637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 39032120 - 39032210
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || |||||||||||| ||| |||||||||||||| | ||||||||| | ||||||||||||| ||||||| ||| ||||    
T  39032120 ggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaagttggtcgtaccttgg 39032210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 40735100 - 40735198
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggca-agttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||||  ||||||||  | | |||||||||||||||||||| ||| ||||    
T  40735100 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgg 40735198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 23410857 - 23410729
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||| |||||||||||||| ||||||||| |||| |||||| |||||| |||||||  ||||||| ||| ||||| |  ||||| |  | |    
T  23410857 cgtgtcacgatttcgcaatgtcgagagcatgttttgcagggtgtccaatcgtgacacaattttggaaaaacgtgtcacaatttttatgttgcttgatacg 23410758  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||| |||||| |||||| ||| ||||    
T  23410757 ttttcaagataagtttggtcgtaccttgg 23410729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 1306541 - 1306426
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||| |   ||||| |||||| |||||| |||||| |||| ||||||||| ||||| || |||||||||||| || | |||||| |  |    
T  1306541 atcgtgacacgatttcgtggtgtcgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgtta 1306442  T
Q  426 agttttcaggataagg 441  Q
    ||||| ||||||||||    
T  1306441 agtttccaggataagg 1306426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 23200666 - 23200583
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||||  |||  | |||||| |||||| |||||| |||| ||||||||||| | |||| |||||||||||||    
T  23200666 atcgtgacacgattttgtgatgctgtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgattt 23200583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 456
Target Start/End: Complemental strand, 9636660 - 9636527
Alignment:
Q  324 gaaatcgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgg 422  Q
    |||||||| |||||||||||  |||||  | ||||||||| || || | |||||| ||||| ||||||||| || | ||||||||||||  ||||| |||    
T  9636660 gaaatcgtaacacgattttggtaatgttaaaagctgtttt-cagggcgtccaatcgtgacatgattttgggaaatcatgacacgatttttggcttgatgg 9636562  T
Q  423 gcaag-ttttcaggataaggttggtcatacattgg 456  Q
     |||| |||||||||||||||||||| ||| ||||    
T  9636561 acaagattttcaggataaggttggtcgtaccttgg 9636527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 21711723 - 21711633
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || |||||||||||| ||||||||||| |||||| | ||||||| | | |||||| |||||||||||||| ||| ||||    
T  21711723 ggtgctcaatcgtgtcacgattttgggaaaacgtgacacaattttcaaacttgctgagtacgttttccggataaggttggtcgtaccttgg 21711633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 456
Target Start/End: Complemental strand, 27027227 - 27027137
Alignment:
Q  368 gtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggca-agttttcaggataaggttggtcatacattgg 456  Q
    |||| ||||| || |||||||||||| |||||||||||||||||||  ||||||||  | | |||||||||||||||||||| ||| ||||    
T  27027227 gtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctggctacatttttcaggataaggttggtcgtaccttgg 27027137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 37408099 - 37408228
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggca 425  Q
    ||||||||||||||||| | || || |||||| |||||| |||| | |||| || ||||||| ||   || ||||||||||||||||  |||| |||  |    
T  37408099 atcgtgacacgattttgtagtgccgtgagctggtttgcagggtgtcaaatcgtggcacgattgtgta-aatcgtgacacgattttcaaacttgttggtta 37408197  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  37408198 agttttcaggataaggttggtcgtaccttgg 37408228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 40734169 - 40734267
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca-agttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| | |||| |||  | | |||||||||||||||||||| ||| ||||    
T  40734169 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttggctacatttttcaggataaggttggtcgtaccttgg 40734267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 47923460 - 47923558
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||  ||||||| |||||||||||||||||| | ||||||||| | | |||||||||||||||||||| ||| ||||    
T  47923460 tttgcagggtgctcaatcgtgtcacatttttgggaaaacgtgacacgattttcaaacttgctgggtacgtttttcaggataaggttggtcgtaccttgg 47923558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 40845157 - 40845085
Alignment:
Q  385 gattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| ||||||||||||||||||| | |||||| || | |||| ||||||||||||||| ||| ||||    
T  40845157 gattttgggaaaacgtgacacgattttcaacgtgctggacacgttttttaggataaggttggtcgtaccttgg 40845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 800748 - 800831
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||| || |||||| |||||  |||||| |||| |||||||||| |||| || |||||||||||||    
T  800748 atcgtgacacgatttcgtgatgccgtgagctggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 5260781 - 5260722
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||| ||||    
T  5260781 cgtgacacgatttttggcttgttgggcaagattttcaggataaggttggtcgtactttgg 5260722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 446
Target Start/End: Original strand, 27974474 - 27974597
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    |||||||||||||||||||| |||| || |||||| |||||| |||| | |||| || ||||||| ||   || | ||||| ||||||| | ||||||||    
T  27974474 gaaatcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattgtgttaaatcttgacatgattttcaaacttgctgg 27974573  T
Q  423 gcaagttttcaggataaggttggt 446  Q
      || |||||| ||||||||||||    
T  27974574 ttaaattttcatgataaggttggt 27974597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 1735884 - 1735958
Alignment:
Q  382 cacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||| ||||||||||||||||||| ||||   | ||  |||| ||||||||||||||| ||| ||||    
T  1735884 cacgattttgggaaaacgtgacacgattttcaacttgaatgacacatttttaggataaggttggtcgtaccttgg 1735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 24694767 - 24694820
Alignment:
Q  403 cacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| | |||||||| || ||||||||||||||||||||| ||| ||||    
T  24694767 cacgatttttaacttgctggacacgttttcaggataaggttggtcgtaccttgg 24694820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 55302777 - 55302713
Alignment:
Q  279 gcaagttgttgaggatgactctcaatttggtggtttggaaaac-ttgaaatcgtgacacgattttg 343  Q
    |||| ||||||||||||||||  ||||||||| |||||||||  ||| ||||||||||||||||||    
T  55302777 gcaaattgttgaggatgactcaaaatttggtg-tttggaaaatgttggaatcgtgacacgattttg 55302713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 20942 - 20814
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| |||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||    
T  20942 cgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattttcggcttgttgggaaag 20843  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||| || |||||||||||| ||| ||||    
T  20842 tttttagaataaggttggtcgtaccttgg 20814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 334 - 447
Target Start/End: Complemental strand, 17786 - 17672
Alignment:
Q  334 cacgattttgcaatgtcgagagc-tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttc 432  Q
    |||| |||| ||||||||||||| ||||||||| |||| |||| | ||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  17786 cacggttttccaatgtcgagagcatgttttgcagggtgtccaaccgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagctttc 17687  T
Q  433 aggataaggttggtc 447  Q
    | |||||||||||||    
T  17686 atgataaggttggtc 17672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 456
Target Start/End: Complemental strand, 42426732 - 42426634
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||||| |||| |||||| ||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||||||||||||||| ||| ||||    
T  42426732 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttcggtttgctgggcaagttttcaggataaggttggtcgtaccttgg 42426634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 42428915 - 42428826
Alignment:
Q  358 gttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  42428915 gttttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttttggcttgctgggcaagtttttaggataaggttggtc 42428826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 32636493 - 32636593
Alignment:
Q  357 tgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattg 455  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||  ||||||||||||| |||||||||||||||||||| ||| |||    
T  32636493 tgttttgcaaggtgtccaatcgtgacacgattttgggaaaacgtggcacgattttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttg 32636592  T
Q  456 g 456  Q
    |    
T  32636593 g 32636593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 30683434 - 30683316
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||| |||||| ||  ||| |||||| |||||| |||||||| ||||||||||||||||||  |||||| ||||||    
T  30683434 cgtgtcacgattttggtaatgtcgagagatgtttt-cagagtgtccaatcgtgacacaattttgggaaaacgtgacacgattttcgacttgctaggcaag 30683336  T
Q  428 ttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||    
T  30683335 ttttcaggataaggttggtc 30683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 9352870 - 9353000
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||||| |||| || |||||| |||||| |||| | |||| || ||||||| || | || ||||||||||||||| | ||||||||  |    
T  9352870 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggtta 9352969  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  9352970 agttttcaggataaggttggtcgtaccttgg 9353000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 19806069 - 19806130
Alignment:
Q  329 cgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19806069 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgatttt 19806130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 13239394 - 13239521
Alignment:
Q  329 cgtgacacgattttgc-aatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag 427  Q
    |||| ||||||||||  ||||||||||||||||||  | ||||  ||||| ||||| ||||||||| |||||||||||||| ||   |||||||| ||||    
T  13239394 cgtgtcacgattttggtaatgtcgagagctgttttt-agggtgttcaatcgtgacaagattttgggtaaacgtgacacgatctttgacttgctggacaag 13239492  T
Q  428 ttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||| ||| ||||    
T  13239493 ttttcaggataaggttggtcgtaccttgg 13239521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 16651104 - 16651021
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||||| ||||||||||||||||  | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  16651104 caatcatgacacgattttgggaaaacgtgacacgatttataacttgttgggtacgttttcaggataaggttggtcgtaccttgg 16651021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 13487885 - 13487972
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| ||||||||||||||| ||||    |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  13487885 ggtgctcaatcgtgacacgattttgggaaaacag--cacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 13487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 27014914 - 27015038
Alignment:
Q  285 tgttgaggatgactctcaatttggtggtttggaaaacttgaaatcgtgacac-------------------gattttgcaatgtcgagagctgttttgca 365  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||                   |||||||||||||||||||||||||||||    
T  27014914 tgttgaggatgactctcaatttggtgttttggaaaacttggaatcgtgacactatttgtgaagcgtgtcatgattttgcaatgtcgagagctgttttgca 27015013  T
Q  366 aggtgcccaatcatgacacgatttt 390  Q
     ||||||||||| ||||||||||||    
T  27015014 gggtgcccaatcgtgacacgatttt 27015038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 38746456 - 38746530
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||| ||||||  ||||||  |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  38746456 caatcgtgacacatttttggaaaaacgtgacacgattttcggcttgctggacaagttttcaggataaggttggtc 38746530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 5057511 - 5057591
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    |||| |||||| ||||||||||||||  ||||||||||| ||||||  |||| || |||||||||||||||||||||||||    
T  5057511 ggtgtccaatcgtgacacgattttggtaaaacgtgacacaattttcgacttgttgagcaagttttcaggataaggttggtc 5057591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 16409140 - 16409223
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||||  |||||| |||||| ||||||||||||| |||  ||||||||| ||| |||| |||||||||||||    
T  16409140 atcgtgacacgattttgtgatgtcgtgagctggtttgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgattt 16409223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 535614 - 535672
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||    
T  535614 cgtgacacgattttcggcttgctggacaagttttcaggataaggttggtcgtaccttgg 535672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 27015025 - 27015083
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  27015025 cgtgacacgattttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgg 27015083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 533492 - 533541
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  533492 cgtgacacggttttcggcttgctgggcaagttttcaggataaggttggtc 533541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 11916540 - 11916637
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||| || |||||||||||| |||||||||||||||||| | |||| |||| | ||||||||||| ||||||||| ||| ||||    
T  11916540 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgttgggtatgttttcaggatcaggttggtcgtaccttgg 11916637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 37438830 - 37438915
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||| ||||||||| |||||||||||||||||  ||||| |||||||| |||||||||||||||| ||| ||| ||||    
T  37438830 ccaatcgtgacatgattttgggaaaacgtgacacgatttttggcttgttgggcaagattttcaggataaggtttgtcgtaccttgg 37438915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 39469029 - 39468976
Alignment:
Q  337 gattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  39469029 gattttgcaatgtcgagagctgttttgcaggatgcccaatcgtgacacgatttt 39468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 40146729 - 40146818
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||| |||||| ||||||||||||||| ||| ||||| |||||||||||||| ||| || |||||||||| || ||||||| ||| ||||    
T  40146729 ggtgtccaatcgtgacacgattttgggaaaatgtgactcgattttcagcttgttggtcacgttttcaggaaaaagttggtcgtaccttgg 40146818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 16407699 - 16407787
Alignment:
Q  322 ttgaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||| |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||| ||| |||| |||||||||||||    
T  16407699 ttgacatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattt 16407787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 28751103 - 28751027
Alignment:
Q  334 cacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||| | ||||||||||| ||||||||| ||||  ||||| ||||||||||||||| ||||||||||| ||||    
T  28751103 cacgatttcgtaatgtcgagagttgttttgcagggtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 14520751 - 14520661
Alignment:
Q  367 ggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||| || || ||||||||| |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  14520751 ggtgctcaatcgtgtcatgattttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 14520661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 9789746 - 9789663
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| |||||||||| |||| || |||||||||||||    
T  9789746 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 9789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 25412472 - 25412531
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  25412472 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 25412531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 12083773 - 12083843
Alignment:
Q  387 ttttggggaaacgtgacacgattttc-agcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||| |||||||||||||||||| | |||| |||| | ||||||||||||||||||||| ||| ||||    
T  12083773 ttttgggaaaacgtgacacgattttcaaacttgttgggtacgttttcaggataaggttggtcgtaccttgg 12083843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 13342771 - 13342821
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggtc 447  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  13342771 cgtgacacgatttttggcttgctgggcaagattttcaggataaggttggtc 13342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 19806117 - 19806175
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||||||||||| ||| ||||    
T  19806117 cgtgacacgattttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgg 19806175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 39468989 - 39468931
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||||||| ||||||||| || ||||| ||||||||||||||| ||| ||||    
T  39468989 cgtgacacgattttcggcttgctggacacgtttttaggataaggttggtcgtaccttgg 39468931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 213029 - 213068
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgatttt 411  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  213029 ccaatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 15465062 - 15464999
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| ||||||||||||    
T  15465062 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatttt 15464999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 18442170 - 18442087
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    |||||||||||||||    ||| || |||||| |||||| |||||| |||| |||||||||| |||| || |||||||||||||    
T  18442170 atcgtgacacgatttcatgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 18442087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 26177529 - 26177612
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattt 410  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| |||||||||  |||| || |||||||||||||    
T  26177529 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgattt 26177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 456
Target Start/End: Original strand, 30182302 - 30182357
Alignment:
Q  402 acacgattttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  30182302 acacgatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 30182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 31004730 - 31004809
Alignment:
Q  368 gtgcccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaag-ttttcaggataaggttggt 446  Q
    |||| ||||| || ||||||| |||| |||||||| ||||| |||| ||||||||||| | |||| ||||||||||||||    
T  31004730 gtgctcaatcgtgtcacgattgtgggaaaacgtgatacgatattcaacttgctgggcacgttttttaggataaggttggt 31004809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Original strand, 36931906 - 36931969
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    |||||| ||||||||||  |||||| |||||| |||||| |||||| |||| ||||||||||||    
T  36931906 atcgtggcacgattttgtgatgtcgtgagctggtttgcagggtgccaaatcgtgacacgatttt 36931969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 15465012 - 15464962
Alignment:
Q  398 cgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtc 447  Q
    ||||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  15465012 cgtgacacgattttcaaacttgctggttaagttttcaggataaggttggtc 15464962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 24136421 - 24136335
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    |||||||||| |||| |  ||| || |||||  |||||| |||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  24136421 atcgtgacacaatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttca 24136335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 25412421 - 25412485
Alignment:
Q  326 aatcgtgacacgatttt-gcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgatttt 390  Q
    ||||||||||||||||| | |||||||||||||||||| || || | |||||| ||||||||||||    
T  25412421 aatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgatttt 25412485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 404
Target Start/End: Original strand, 26170420 - 26170497
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgaca 404  Q
    |||||||||||||||||  ||| || |||||| |||||| |||||| |||| |||||||||  |||| || |||||||    
T  26170420 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgaca 26170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 372 - 456
Target Start/End: Complemental strand, 80984 - 80900
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    |||||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  80984 ccaatcgtgacacgattttgggaaaacgtggcacgattttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgg 80900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 456
Target Start/End: Complemental strand, 45763 - 45630
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    ||||||||||||| |||||| ||||||| |||||| |||||| |||| | |||| || ||||||| || | || ||||||||||||||| | ||||||||    
T  45763 gaaatcgtgacacaattttgtaatgtcgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctgg 45664  T
Q  423 gcaagttttcaggataaggttggtcatacattgg 456  Q
      ||||||||||||||||||||||| ||| ||||    
T  45663 ctaagttttcaggataaggttggtcgtaccttgg 45630  T

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Target: scaffold0087 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 36365 - 36498
Alignment:
Q  324 gaaatcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgg 422  Q
    |||||| ||| ||||||||| ||||||| |||||| |||||| |||| | |||| || |||||||||| | ||||||||||| |||||| | ||||||||    
T  36365 gaaatcatgatacgattttgtaatgtcgtgagctggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgctgg 36464  T
Q  423 gcaagttttcaggataaggttggtcatacattgg 456  Q
    | | ||||||||||||||||||||| ||| ||||    
T  36465 gtacgttttcaggataaggttggtcgtaccttgg 36498  T

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Target: scaffold0087; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 43497 - 43627
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    ||||||||||||||||| ||||||| |||||| ||| || |||| | |||| ||  ||||||||| | || ||||||| ||||||| | ||||||||  |    
T  43497 atcgtgacacgattttgtaatgtcgtgagctggtttacagggtgtcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggtta 43596  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  43597 agttttcaggataaggttggtcgtaccttgg 43627  T

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Target: scaffold0006 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 132815 - 132945
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttc-agcttgctgggca 425  Q
    |||||| ||||||||||  |||||| |||||| ||||||  ||| | |||| ||||||||||||| |||| ||||||| ||||||| | ||||||||  |    
T  132815 atcgtggcacgattttgtgatgtcgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggtta 132914  T
Q  426 agttttcaggataaggttggtcatacattgg 456  Q
    |||||||||||||||||||||| ||| ||||    
T  132915 agttttcaggataaggttggtcgtaccttgg 132945  T

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Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 3009 - 2925
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||| || |||||||||||| ||||||||| |||||||||  ||||||||| | ||||||||||||||||||||| ||| ||||    
T  3009 caatcgtgtcacgattttgggaaaacgtgacccgattttcaaacttgctgggtatgttttcaggataaggttggtcgtaccttgg 2925  T

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Target: scaffold0006; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 6189 - 6117
Alignment:
Q  385 gattttggggaaacgtgacacgattttcag-cttgctgggcaagttttcaggataaggttggtcatacattgg 456  Q
    ||||||||| ||| |||||||||||||||  ||||||||| | ||||||||||||||||||||| ||| ||||    
T  6189 gattttgggaaaatgtgacacgattttcaaacttgctgggtacgttttcaggataaggttggtcgtaccttgg 6117  T

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Target: scaffold0016 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 114271 - 114345
Alignment:
Q  372 ccaatcatgacacgattttggggaaacgtgacacgattttcagcttgctgggc-aagttttcaggataaggttggt 446  Q
    |||||||||||||||| ||||| |||||||||||||||||  ||||||||||| || |||||||||||||||||||    
T  114271 ccaatcatgacacgatattgggaaaacgtgacacgatttt-ggcttgctgggcaaaattttcaggataaggttggt 114345  T

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Target: scaffold0510 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 447
Target Start/End: Original strand, 1146 - 1267
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacga-ttttcagcttgctgggca 425  Q
    ||||||||||||||||| ||| ||| ||| || |||||| |||| | |||| ||  ||||||||| | || |||||||||| |||| | ||||||||  |    
T  1146 atcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggtta 1245  T
Q  426 agttttcaggataaggttggtc 447  Q
    ||||||||||||||||||||||    
T  1246 agttttcaggataaggttggtc 1267  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 434217 - 434302
Alignment:
Q  373 caatcatgacacgattttggggaaacgtgacacga-ttttcagcttgctgggcaag-ttttcaggataaggttggtcatacattgg 456  Q
    ||||| ||||||||||||||| || |||||||||| ||||  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  434217 caatcgtgacacgattttgggaaatcgtgacacgattttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgg 434302  T

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Target: scaffold1519 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 545 - 631
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||||||||||||| |  ||| || |||||  |||||| |||||| |||| ||||||||| ||| |||| ||||||||||||||||    
T  545 atcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattttca 631  T

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Target: scaffold0188 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 17494 - 17580
Alignment:
Q  327 atcgtgacacgattttgcaatgtcgagagctgttttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgattttca 413  Q
    ||||||||||||||| |  ||| || |||||| |||||| |||||| |||| ||||||||| ||||| || ||||||| ||||||||    
T  17494 atcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttca 17580  T

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Target: scaffold0466 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 6820 - 6868
Alignment:
Q  398 cgtgacacgattttcagcttgctgggcaagttttcaggataaggttggt 446  Q
    |||||||||||||||| |||||| || | ||||||||||||||||||||    
T  6820 cgtgacacgattttcaacttgctaggaacgttttcaggataaggttggt 6868  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 86116 - 86066
Alignment:
Q  360 tttgcaaggtgcccaatcatgacacgattttggggaaacgtgacacgatttt 411  Q
    |||||| ||||| |||||||| |||||||||||| |||||||||||||||||    
T  86116 tttgcagggtgctcaatcatg-cacgattttgggaaaacgtgacacgatttt 86066  T

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