View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3061_low_29 (Length: 252)
Name: NF3061_low_29
Description: NF3061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3061_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 32672009 - 32672250
Alignment:
| Q |
4 |
atgtccaagaaaatgatcttttgcttatttaccacctattcataaaagaaaagctcaatctcccttttgtgatcatacaaaatatgattcataccgtcga |
103 |
Q |
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|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32672009 |
atgtccaatacaatgatcttttgcttatttaccacctattcataaaagaaaagctcaatctcccttttgtgatcatacaaaatatgattcataccgtcga |
32672108 |
T |
|
| Q |
104 |
aacctctaacaaaaagttcaatgtttcatatggaatacactcaccataattttcaaaaaatttaatgttccattagatagtgaggagtccaacttcgagt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32672109 |
aacctctaacaaaaagttcaatgtttcatatggaatacactcaccataattttcaaaaaatttaatgttccattagatagtgaggagtccaacttcgagt |
32672208 |
T |
|
| Q |
204 |
actccaaatttactccaaaaaatgtcaacaatatacaattta |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32672209 |
actccaaatttactccaaaaaatgtcaacaatatacaattta |
32672250 |
T |
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