View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3061_low_35 (Length: 243)
Name: NF3061_low_35
Description: NF3061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3061_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28226486 - 28226710
Alignment:
| Q |
1 |
tgaataaaaatttgcagttcataagtgtcattgatattaaatattgaacttgacaacatttaacaattactgtagcataagagtaaaattttgctgtctt |
100 |
Q |
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| T |
28226486 |
tgaataaaaatttgcagttcataagtgtcattgatattaaatattgaacttgacaacatttaacaattactgtagcataagagtaaaattttgttgtctt |
28226585 |
T |
|
| Q |
101 |
ttacagcaccatttaactactatgataacataatgcaaaattttctaatttcatgacctaataatgttttgcagtctcatacaaatgtcccgtttgagga |
200 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28226586 |
tcacagcaccatttaactactatgataacataatgcaaaattttctaatttcatgacctaataatgttttgcagtctcatacaaatgtcccgtttgagga |
28226685 |
T |
|
| Q |
201 |
aagatcaagattgtgcaaatgtctt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
28226686 |
aagatcaagattgtgcaaatgtctt |
28226710 |
T |
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