View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3061_low_46 (Length: 207)

Name: NF3061_low_46
Description: NF3061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3061_low_46
NF3061_low_46
[»] chr8 (26 HSPs)
chr8 (19-181)||(9209911-9210071)
chr8 (20-94)||(4302121-4302195)
chr8 (37-94)||(30381832-30381889)
chr8 (37-94)||(37566531-37566588)
chr8 (110-181)||(4993238-4993309)
chr8 (110-181)||(40740747-40740818)
chr8 (113-181)||(32062332-32062400)
chr8 (110-181)||(3727147-3727218)
chr8 (19-94)||(4656077-4656152)
chr8 (19-94)||(7149035-7149110)
chr8 (19-94)||(9458508-9458583)
chr8 (19-94)||(10795385-10795460)
chr8 (19-94)||(40264285-40264360)
chr8 (19-94)||(43604385-43604460)
chr8 (19-93)||(42275945-42276019)
chr8 (110-147)||(5957038-5957075)
chr8 (19-92)||(28620685-28620757)
chr8 (19-87)||(14062493-14062561)
chr8 (110-149)||(30203411-30203450)
chr8 (19-52)||(5266793-5266826)
chr8 (19-108)||(35143087-35143176)
chr8 (34-94)||(1605810-1605870)
chr8 (19-87)||(14781265-14781333)
chr8 (19-87)||(18957851-18957919)
chr8 (19-87)||(32498900-32498968)
chr8 (19-87)||(44724914-44724982)
[»] chr1 (33 HSPs)
chr1 (20-94)||(1923379-1923453)
chr1 (19-94)||(19894825-19894900)
chr1 (37-94)||(36403103-36403160)
chr1 (112-180)||(44595706-44595774)
chr1 (37-108)||(9174906-9174977)
chr1 (110-181)||(10881835-10881906)
chr1 (110-181)||(36313613-36313684)
chr1 (110-181)||(43949144-43949215)
chr1 (19-92)||(28038346-28038420)
chr1 (19-109)||(45319476-45319566)
chr1 (110-181)||(18023789-18023860)
chr1 (19-94)||(45535758-45535833)
chr1 (110-149)||(51295755-51295794)
chr1 (19-94)||(51825971-51826046)
chr1 (37-94)||(10897660-10897718)
chr1 (19-109)||(51702603-51702693)
chr1 (37-93)||(9832736-9832791)
chr1 (110-181)||(24466539-24466611)
chr1 (120-180)||(46220644-46220704)
chr1 (19-94)||(4289893-4289968)
chr1 (110-181)||(18436319-18436390)
chr1 (19-94)||(26881826-26881901)
chr1 (42-92)||(33242473-33242524)
chr1 (39-105)||(43556710-43556777)
chr1 (19-94)||(52706389-52706464)
chr1 (19-108)||(29395534-29395623)
chr1 (19-87)||(6313585-6313653)
chr1 (27-87)||(20111699-20111759)
chr1 (27-87)||(23326881-23326941)
chr1 (19-87)||(25613101-25613169)
chr1 (117-181)||(46056812-46056876)
chr1 (19-87)||(48198956-48199024)
chr1 (19-87)||(48207539-48207607)
[»] chr2 (30 HSPs)
chr2 (19-92)||(38821263-38821336)
chr2 (20-94)||(34027787-34027861)
chr2 (37-94)||(12135553-12135610)
chr2 (110-181)||(44966029-44966100)
chr2 (37-94)||(24935301-24935358)
chr2 (37-94)||(25683994-25684051)
chr2 (37-92)||(11535693-11535748)
chr2 (110-188)||(6461241-6461319)
chr2 (37-94)||(30046604-30046661)
chr2 (37-94)||(30137648-30137705)
chr2 (20-64)||(20156621-20156665)
chr2 (19-94)||(29941890-29941965)
chr2 (19-94)||(45547916-45547991)
chr2 (37-94)||(24192673-24192730)
chr2 (113-166)||(44022183-44022236)
chr2 (19-87)||(25289164-25289232)
chr2 (22-106)||(27979901-27979985)
chr2 (22-106)||(28066431-28066515)
chr2 (113-181)||(40711178-40711246)
chr2 (19-94)||(7486967-7487042)
chr2 (110-181)||(25220804-25220875)
chr2 (110-181)||(25396906-25396977)
chr2 (110-181)||(34929201-34929272)
chr2 (39-94)||(35171391-35171446)
chr2 (119-181)||(17696047-17696108)
chr2 (19-108)||(2289285-2289374)
chr2 (45-93)||(2086672-2086720)
chr2 (19-87)||(18178281-18178349)
chr2 (19-87)||(26789794-26789862)
chr2 (113-181)||(31742703-31742771)
[»] chr3 (36 HSPs)
chr3 (22-108)||(24573429-24573515)
chr3 (25-93)||(35347101-35347169)
chr3 (19-94)||(44040911-44040986)
chr3 (37-94)||(43152049-43152106)
chr3 (115-181)||(53287472-53287538)
chr3 (19-94)||(34290177-34290252)
chr3 (19-94)||(36054020-36054095)
chr3 (19-94)||(45214094-45214169)
chr3 (110-188)||(24657224-24657302)
chr3 (37-94)||(27593965-27594023)
chr3 (20-84)||(36786921-36786982)
chr3 (113-181)||(30732843-30732911)
chr3 (19-94)||(2124715-2124790)
chr3 (19-94)||(24149847-24149922)
chr3 (19-94)||(30589846-30589921)
chr3 (20-90)||(14978546-14978616)
chr3 (120-181)||(32733685-32733746)
chr3 (19-92)||(46223318-46223391)
chr3 (110-166)||(28392160-28392216)
chr3 (19-87)||(45254572-45254640)
chr3 (19-105)||(10661196-10661283)
chr3 (110-181)||(12789876-12789947)
chr3 (19-94)||(23360578-23360653)
chr3 (19-94)||(23367418-23367493)
chr3 (19-94)||(26556868-26556943)
chr3 (111-181)||(20379075-20379145)
chr3 (33-94)||(26292574-26292635)
chr3 (40-94)||(28845650-28845706)
chr3 (19-108)||(31645360-31645449)
chr3 (33-94)||(38628830-38628891)
chr3 (110-163)||(41519520-41519573)
chr3 (19-87)||(20833907-20833975)
chr3 (19-87)||(36673277-36673345)
chr3 (113-181)||(42791068-42791135)
chr3 (27-87)||(44707954-44708014)
chr3 (19-87)||(52617104-52617172)
[»] chr4 (37 HSPs)
chr4 (24-93)||(16654187-16654256)
chr4 (110-181)||(26740822-26740893)
chr4 (110-181)||(41236023-41236094)
chr4 (110-181)||(47388526-47388597)
chr4 (110-181)||(55322948-55323019)
chr4 (110-180)||(49250047-49250117)
chr4 (37-94)||(54510579-54510636)
chr4 (113-180)||(8171110-8171177)
chr4 (19-94)||(8583011-8583086)
chr4 (19-94)||(42315883-42315958)
chr4 (110-181)||(50328379-50328450)
chr4 (19-94)||(53272848-53272923)
chr4 (19-92)||(3434839-3434912)
chr4 (19-108)||(7808999-7809088)
chr4 (110-187)||(42674082-42674159)
chr4 (33-94)||(44930624-44930685)
chr4 (37-94)||(47686840-47686897)
chr4 (19-92)||(52110261-52110333)
chr4 (113-181)||(5807360-5807428)
chr4 (19-87)||(23988206-23988274)
chr4 (113-181)||(46393209-46393277)
chr4 (113-188)||(14593596-14593671)
chr4 (110-181)||(53133531-53133602)
chr4 (110-148)||(16067812-16067850)
chr4 (19-100)||(49833976-49834058)
chr4 (19-108)||(7820950-7821039)
chr4 (45-94)||(10600650-10600699)
chr4 (19-87)||(32323078-32323147)
chr4 (19-108)||(32683131-32683220)
chr4 (112-180)||(4442286-4442354)
chr4 (19-87)||(27769073-27769141)
chr4 (68-108)||(28846166-28846206)
chr4 (19-87)||(29649147-29649215)
chr4 (110-166)||(37056240-37056296)
chr4 (19-87)||(38234612-38234680)
chr4 (110-166)||(45891354-45891410)
chr4 (113-181)||(48622251-48622319)
[»] chr6 (18 HSPs)
chr6 (37-94)||(35165659-35165716)
chr6 (37-94)||(10008385-10008442)
chr6 (110-181)||(11842271-11842342)
chr6 (19-92)||(10262818-10262887)
chr6 (19-94)||(3109360-3109435)
chr6 (113-180)||(4844471-4844538)
chr6 (19-94)||(29864762-29864837)
chr6 (112-181)||(2617056-2617125)
chr6 (19-92)||(6475755-6475828)
chr6 (113-181)||(9318780-9318848)
chr6 (110-166)||(24548005-24548061)
chr6 (110-150)||(30323078-30323118)
chr6 (120-181)||(13243821-13243882)
chr6 (110-179)||(17515337-17515406)
chr6 (19-84)||(27585205-27585270)
chr6 (19-87)||(7104533-7104601)
chr6 (19-87)||(8790029-8790097)
chr6 (19-87)||(31068429-31068497)
[»] chr7 (38 HSPs)
chr7 (110-181)||(20009657-20009728)
chr7 (41-94)||(32631550-32631603)
chr7 (19-107)||(30111794-30111882)
chr7 (19-94)||(27417658-27417733)
chr7 (39-94)||(41061223-41061278)
chr7 (19-94)||(42677257-42677332)
chr7 (37-94)||(39300436-39300494)
chr7 (19-105)||(47912523-47912609)
chr7 (37-94)||(47032339-47032396)
chr7 (113-181)||(36827815-36827883)
chr7 (19-94)||(152862-152937)
chr7 (19-94)||(34114551-34114626)
chr7 (37-92)||(36354664-36354718)
chr7 (114-181)||(42306277-42306344)
chr7 (19-94)||(46197115-46197190)
chr7 (19-106)||(48136360-48136447)
chr7 (110-180)||(676292-676361)
chr7 (110-188)||(23358507-23358585)
chr7 (19-93)||(33475538-33475612)
chr7 (19-108)||(12252382-12252471)
chr7 (37-105)||(31495340-31495409)
chr7 (57-93)||(11042523-11042559)
chr7 (113-181)||(25971501-25971568)
chr7 (19-91)||(35089110-35089182)
chr7 (20-64)||(40098256-40098300)
chr7 (37-93)||(48633684-48633740)
chr7 (110-181)||(17354422-17354493)
chr7 (19-94)||(28343319-28343394)
chr7 (113-180)||(37828404-37828471)
chr7 (111-149)||(48633958-48633996)
chr7 (123-180)||(3622276-3622333)
chr7 (28-65)||(25295270-25295307)
chr7 (19-87)||(29893965-29894034)
chr7 (19-92)||(43056700-43056773)
chr7 (19-94)||(12741382-12741458)
chr7 (19-87)||(18839303-18839371)
chr7 (19-87)||(23102300-23102368)
chr7 (19-87)||(30823596-30823664)
[»] chr5 (24 HSPs)
chr5 (37-94)||(6901366-6901423)
chr5 (33-94)||(18676941-18677002)
chr5 (113-181)||(14575931-14575999)
chr5 (110-181)||(40298262-40298333)
chr5 (19-105)||(13949800-13949886)
chr5 (110-180)||(19961604-19961674)
chr5 (19-104)||(10553737-10553822)
chr5 (110-181)||(1352833-1352904)
chr5 (19-94)||(11632696-11632771)
chr5 (110-181)||(36527477-36527547)
chr5 (119-181)||(30685636-30685698)
chr5 (33-110)||(26629506-26629583)
chr5 (120-181)||(28574822-28574883)
chr5 (19-87)||(13717104-13717172)
chr5 (110-166)||(13951117-13951173)
chr5 (19-94)||(40411418-40411494)
chr5 (19-94)||(10553449-10553524)
chr5 (110-149)||(15591693-15591732)
chr5 (113-180)||(42011310-42011377)
chr5 (110-188)||(7406217-7406295)
chr5 (110-188)||(25983113-25983191)
chr5 (48-94)||(40459310-40459356)
chr5 (19-108)||(2275266-2275354)
chr5 (119-168)||(3938466-3938515)
[»] scaffold0472 (1 HSPs)
scaffold0472 (19-94)||(948-1023)
[»] scaffold0153 (1 HSPs)
scaffold0153 (19-114)||(33815-33910)
[»] scaffold0050 (1 HSPs)
scaffold0050 (113-181)||(37254-37321)
[»] scaffold0237 (1 HSPs)
scaffold0237 (19-94)||(20457-20532)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-94)||(80803-80878)
[»] scaffold0047 (1 HSPs)
scaffold0047 (113-166)||(66201-66254)
[»] scaffold0006 (1 HSPs)
scaffold0006 (110-181)||(50608-50679)
[»] scaffold0005 (1 HSPs)
scaffold0005 (113-188)||(223707-223782)
[»] scaffold0054 (1 HSPs)
scaffold0054 (19-87)||(36417-36486)


Alignment Details
Target: chr8 (Bit Score: 112; Significance: 8e-57; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 9209911 - 9210071
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccccttatatctttaac 118  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | ||| ||| |||  ||||||||||    
T  9209911 atcaatataatctcacaaaatcttttaaaatcttcaggattttgtttgccaaaatagtcttttaaaatcttaattcaatacatctcct--tatctttaac 9210008  T
Q  119 tttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  9210009 tttttaaagaattgaatgcacaaaatttttggatatatttcttcttttgaattttttaacatg 9210071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 4302195 - 4302121
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||||||||||||||| |  ||||| ||| | |||||||||||||||| |||||||||    
T  4302195 tcaatataatctcacaaaatcttttaaaatctttagcattttattttctaaaatagtcttttaaattctcaatcc 4302121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 30381889 - 30381832
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||    
T  30381889 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatcc 30381832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 37566588 - 37566531
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||    
T  37566588 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatcc 37566531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 4993309 - 4993238
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||||||||||| || ||||||||||||||   ||||||||||||||  |||| ||||||||    
T  4993309 atctttaactttttaatgaattaaatgcacaaaattttagagaatatttcttcttttatatttcttaacatg 4993238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 40740747 - 40740818
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||| ||||| ||||||||||||||   |||||| ||||||| | ||||||||||||    
T  40740747 atctttaactttttaatgatttgaatgcacaaaattttagagaatatttattcttttaggttttttaacatg 40740818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 32062332 - 32062400
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||| ||||||||||||||||| |||||||||||||  | |||||||||||||||  ||| ||||||||    
T  32062332 tttatctttttaatgaattgaatgcacaaaattttaaaaaatatttcttcttttgagtttcttaacatg 32062400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 3727218 - 3727147
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||| ||||||||||||||||| |||||||||||||  | |||||  ||||||| | ||||||||||||    
T  3727218 atctttagctttttaatgaattgaatgcacaaaattttataaaatattcattcttttaggttttttaacatg 3727147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 4656077 - 4656152
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  4656077 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 4656152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 7149035 - 7149110
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  7149035 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 7149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 9458508 - 9458583
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  9458508 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 9458583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 10795460 - 10795385
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  10795460 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 10795385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 40264360 - 40264285
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  40264360 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 40264285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 43604460 - 43604385
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  43604460 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 43604385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 42275945 - 42276019
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||    
T  42275945 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatc 42276019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 5957075 - 5957038
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaatttt 147  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  5957075 atctttaactttttaatgaattgaatgcacaaaatttt 5957038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 28620685 - 28620757
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| |||| |||||||| |||||||||||| | |||||| |||||||||| | ||||| |||||||||||    
T  28620685 atcaatacaatcacacaaaattttttaaaatctttaagatttt-tttgccaaaacaatctttcaaaatctcaat 28620757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 14062493 - 14062561
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| ||||||||||||| || ||||||||||  ||||||| ||| ||||||||    
T  14062493 atcaatagaatcacacaaagtcttttaaaatctgcaggattttgtttttcaaaataatctcttaaaatc 14062561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 30203411 - 30203450
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttag 149  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  30203411 atctttaactttttaatgagttgaatgcacaaaattttag 30203450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 5266826 - 5266793
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatctt 52  Q
    ||||||||||||||||||| ||||||||||||||    
T  5266826 atcaatataatctcacaaagtcttttaaaatctt 5266793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 35143087 - 35143176
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||| ||| | |||||||||||||  | |||||  |||  ||||||||||||||| ||||| ||||| ||| |||||||||    
T  35143087 atcaatacaatcttacagagtcttttaaaatctcaaagatttcttttatcaaaatagtcttttacaatcttaatccaatacatcccctta 35143176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 1605870 - 1605810
Alignment:
Q  34 caaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||| |||||||||||||||| |||||| | |  ||||| ||| |||||||||||||||||    
T  1605870 caaagtcttttaaaatcttcaagattttttctatcaaaacagtattttaaaatctcaatcc 1605810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 14781333 - 14781265
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  14781333 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 14781265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 18957919 - 18957851
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  18957919 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 18957851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 32498900 - 32498968
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  32498900 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 32498968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 44724982 - 44724914
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  44724982 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 44724914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 1923453 - 1923379
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  1923453 tcaatataatctcacaaaatcttttaaaatcttcaagattttgtttgccaaaataatcttttaaaatctcaatcc 1923379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 19894825 - 19894900
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||| ||||||||||||||||||||| | |||| | ||||||||||||| ||||||||||| ||||||    
T  19894825 atcaatataatcacacaaaatcttttaaaatctttaagattctttttgccaaaatagacttttaaaatcccaatcc 19894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 36403103 - 36403160
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||    
T  36403103 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatcc 36403160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 44595774 - 44595706
Alignment:
Q  112 ctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    ||||||||||||||||||||||| |||||||||||||    |||||||||||||| ||||| |||||||    
T  44595774 ctttaactttttaatgaattgaatgcacaaaattttaaagaatatttcttcttttagatttcttaacat 44595706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 9174906 - 9174977
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    |||||||||||||||||| || ||| ||||  |||||||||||||||||||||||||  ||| |||||||||    
T  9174906 aatcttttaaaatcttcaagactttttttgttaaaatagtcttttaaaatctcaatcaaatacatcccctta 9174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 10881906 - 10881835
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||| |||||||||||||||| ||| |||||||||||  |||||||||||||||| ||| || |||||    
T  10881906 atctttaattttttaatgaattgaatgcataaaattttagggaatatttcttcttttggttttcttgacatg 10881835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 36313613 - 36313684
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||||||||||||||  ||||||||||||  | |||||||||||||||  ||| ||||||||    
T  36313613 atctttaactttttaatgaattgaattcacaaaattttaaaaaatatttcttcttttgactttcttaacatg 36313684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 43949144 - 43949215
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||| |||||| |||||||||||| ||||||||||||||   |||||||||||||||| ||| ||||||||    
T  43949144 atcttcaactttgtaatgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatg 43949215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 28038420 - 28038346
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtc-ttttaaaatctcaat 92  Q
    ||||||||||| ||||||| |||||||||||||  |  |||||||||||||||||| || |||||||||||||||    
T  28038420 atcaatataatttcacaaagtcttttaaaatctgtagaattttgtttgccaaaataatctttttaaaatctcaat 28038346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 45319476 - 45319566
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccccttat 109  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||| ||| | ||||||||    
T  45319476 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacacccccttat 45319566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 18023860 - 18023789
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||||| | | |||||||| | | ||||||||||| ||| |||| ||||||||    
T  18023860 atctttaactttttaatgaattgaatgaataaaatttttgaaaatatttcttctcttgaatttcttaacatg 18023789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 45535758 - 45535833
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  |||||||||| ||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  45535758 atcaatacaatccaacaaaatcttctaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 45535833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 51295794 - 51295755
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttag 149  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  51295794 atctttaactttttaatgaattgaatgcacaaaattttag 51295755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 51826046 - 51825971
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| |||||||||| | ||||| ||| |||||||||    
T  51826046 atcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaactctcaatcc 51825971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 10897660 - 10897718
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgc-caaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||| ||| | |||||||||||||||||||||||||||    
T  10897660 aatcttttaaaatcttcaagacttttttttctcaaaatagtcttttaaaatctcaatcc 10897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 51702603 - 51702693
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccccttat 109  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||  ||||||||| | ||||||||    
T  51702603 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcctatacacccccttat 51702693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 9832736 - 9832791
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    |||||||||||||||||| || ||| |||| |||| |||||||||||||||||||||    
T  9832736 aatcttttaaaatcttcaagactttttttgtcaaa-tagtcttttaaaatctcaatc 9832791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 24466611 - 24466539
Alignment:
Q  110 atctttaacttttt-aatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||| ||| ||||||| | ||||||||||||   ||||||||| ||||| |||||||||||||    
T  24466611 atctttaacttttttaattaattgaatgtacaaaattttagagaatatttctttttttgaattttttaacatg 24466539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 46220704 - 46220644
Alignment:
Q  120 ttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    ||||||||| ||||| ||||||||||| |||| ||||||||| ||||| |||| |||||||    
T  46220704 ttttaatgagttgaatgcacaaaatttaaggaaatatttctttttttgaatttcttaacat 46220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 4289893 - 4289968
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||  |||||| ||||||||||| | || |||||||||| |||||||| ||| |||||||| ||||||    
T  4289893 atcaatagaattacacaaagtcttttaaaatatacaggattttgttttccaaaataatctcttaaaatcccaatcc 4289968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 18436390 - 18436319
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||  ||||||||||||||| || |||| ||| | || ||||||||| |||||||||| ||||||||    
T  18436390 atctttaatgttttaatgaattgaatgctcaaagtttaaagaaatatttctttttttggatttcttaacatg 18436319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 26881901 - 26881826
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||| ||||||||| | |||||| | |  |||||||||||||||||||||||||||    
T  26881901 atcaatacaatccaacaaagtcttctaaaatctttaagattttttctatcaaaatagtcttttaaaatctcaatcc 26881826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 33242524 - 33242473
Alignment:
Q  42 tttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||||||||| || |||| |||| |||||||||||||||||||||||||    
T  33242524 tttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaat 33242473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 43556710 - 43556777
Alignment:
Q  39 tcttttaaaatcttcat-gattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccc 105  Q
    |||||||||||||||   |||||| |||||||||||||||||| | ||||||||||| ||| ||||||    
T  43556710 tcttttaaaatcttctgagattttatttgccaaaatagtctttcacaatctcaatccaatacatcccc 43556777  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 52706389 - 52706464
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | |||||||||||||||||||    
T  52706389 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaatcc 52706464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 29395623 - 29395534
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||  ||||| ||| | |||||||    
T  29395623 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccctta 29395534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 6313585 - 6313653
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  6313585 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 6313653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 20111759 - 20111699
Alignment:
Q  27 aatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||||||| |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  20111759 aatctcacaaagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 20111699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 23326881 - 23326941
Alignment:
Q  27 aatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||||||| |||||||||||||| ||||| || |||   |||||||| ||||||||||    
T  23326881 aatctcacaaagtcttttaaaatcttaatgatattttttattaaaatagttttttaaaatc 23326941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 25613101 - 25613169
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  25613101 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 25613169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 46056812 - 46056876
Alignment:
Q  117 actttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||| ||||||||||||    ||| |||||||||| |  |||||||||||    
T  46056812 actttttaatgaattgaaatcacaaaattttaaagaatacttcttcttttaggatttttaacatg 46056876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 48198956 - 48199024
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||    
T  48198956 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatc 48199024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 48207539 - 48207607
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||    
T  48207539 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatc 48207607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38821336 - 38821263
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  38821336 atcaatataatctcacaaaatcttttaaaatcttcagaattttgtttgccaaaataatcttttaaaatctcaat 38821263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 34027861 - 34027787
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  34027861 tcaatataatctcacaaaatcctttaaaatcttcaagattttgtttgccaaaataatattttaaaatctcaatcc 34027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 12135553 - 12135610
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  12135553 aatcttttaaaatcttcatgattttttttgccaaaatagtctttcaaaatctcaatcc 12135610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 44966100 - 44966029
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||| ||| ||||||||    
T  44966100 atctttaactttttaatgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatg 44966029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 24935358 - 24935301
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  24935358 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatcc 24935301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 25684051 - 25683994
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  25684051 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatcc 25683994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 11535693 - 11535748
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||||||||||    
T  11535693 aatcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaat 11535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 6461319 - 6461241
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||||||||||||||||||||||| | | |||||||| |   |||||||||||||||  |||||||||||| ||||||    
T  6461319 atctttaactttttaatgaattgaatgtataaaattttggagaatatttcttcttttgagttttttaacatgtgtccta 6461241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 30046604 - 30046661
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||| ||||| |||||||    
T  30046604 aatcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatcc 30046661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 30137648 - 30137705
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||| ||||| |||||||    
T  30137648 aatcttttaaaatcttcatgactttttttaccaaaatagtctttcaaaatttcaatcc 30137705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 20156665 - 20156621
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtt 64  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  20156665 tcaatataatctcacaaaatcttttaaaatcttcaaaattttgtt 20156621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 29941890 - 29941965
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  29941890 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 29941965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 45547916 - 45547991
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  45547916 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 45547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 24192730 - 24192673
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||  | ||| |||  |||||||||||||||||||||||||||    
T  24192730 aatcttttaaaatcttcaaaactttttttatcaaaatagtcttttaaaatctcaatcc 24192673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 44022236 - 44022183
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||| ||||||||    
T  44022236 tttaactttttaattaattgaatgcacaaaattttagggaatattacttctttt 44022183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 25289164 - 25289232
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||    
T  25289164 atcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatc 25289232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 27979901 - 27979985
Alignment:
Q  22 aatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccct 106  Q
    |||| |||| |||||| |||||||||||||| | |||| | |||| ||||| | ||||| ||||||||||||| ||| |||||||    
T  27979901 aatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaatacatcccct 27979985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 28066431 - 28066515
Alignment:
Q  22 aatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccct 106  Q
    |||| |||| |||||| |||||||||||||| | |||| | |||| ||||| | ||||| ||||||||||||| ||| |||||||    
T  28066431 aatacaatcacacaaagtcttttaaaatctttaagattatttttgacaaaacaatctttcaaaatctcaatccaatacatcccct 28066515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 40711246 - 40711178
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||| || |||||||||||||    |||||||||||||||  ||| ||||||||    
T  40711246 tttaactttttaatgaattaaatgcacaaaattttatacaatatttcttcttttgtgtttcttaacatg 40711178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 7487042 - 7486967
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  |||||  ||||||||||||||||||||    
T  7487042 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacggtcttttaaaatctcaatcc 7486967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 25220804 - 25220875
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||| |||||||| |||| ||  || |||||||||| | || |||||||||||| |||||||||||||    
T  25220804 atctttaattttttaatcaattaaattcataaaattttagaaaatgtttcttcttttgaattttttaacatg 25220875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 25396906 - 25396977
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||  ||||||||||||||| | ||||| ||| || | || |||||| |||||||||||||||||||    
T  25396906 atctttaatgttttaatgaattgaatgtacaaagtttaagaaaatctttctttttttggattttttaacatg 25396977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 34929272 - 34929201
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||  ||||||||||||||| ||||||| ||| |||| ||||| ||| || ||||||| ||||||||    
T  34929272 atctttaatgttttaatgaattgaatgcacaaagtttaaggaaatattcctttttctggatttcttaacatg 34929201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 35171446 - 35171391
Alignment:
Q  39 tcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  35171446 tcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 35171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 17696108 - 17696047
Alignment:
Q  119 tttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||||| ||||||| ||| |||  ||||||||| |||||||||| ||||||||    
T  17696108 tttttaatgaattgaatgcacaaagtttaagggaatatttctt-ttttggatttcttaacatg 17696047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 2289285 - 2289374
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| |||| |||||| |||||||||||||| | |||| | ||| | |||| | |||||||||||| |||||| ||| | |||||||    
T  2289285 atcaatacaatcacacaaagtcttttaaaatctttaagattcttttttctaaaacaatcttttaaaatcccaatccaatacaccccctta 2289374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 2086672 - 2086720
Alignment:
Q  45 aaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||||||  ||||| ||| | |||||||||||||||||||||||||    
T  2086672 aaaatcttcagaattttatttactaaaatagtcttttaaaatctcaatc 2086720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 18178281 - 18178349
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  18178281 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 18178349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 26789794 - 26789862
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  26789794 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 26789862  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 31742771 - 31742703
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||| ||||||||||| | ||||||||| |  | |||||| |||||||| |||| ||||||||    
T  31742771 tttaacttttgaatgaattgaatgtacaaaatttcaaaaaatattttttcttttgaatttcttaacatg 31742703  T

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Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 24573515 - 24573429
Alignment:
Q  22 aatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| ||| | |||||||    
T  24573515 aatataatttcacaaagtcttttaaaatcttcaggattttgtttgccaaaataatcttttaaaatcccaatccaatacaccccctta 24573429  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 35347169 - 35347101
Alignment:
Q  25 ataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  35347169 ataatctcacaaagtcttttaaaatcttcaggatttagtttgccaaaatagtctgataaaatctcaatc 35347101  T

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Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 44040986 - 44040911
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||| |||||||||||||||||||||  || ||||||| ||||||||||| ||||||||| |||||    
T  44040986 atcaatataatctcgcaaaatcttttaaaatcttcagaatcttgtttgacaaaatagtctcttaaaatcttaatcc 44040911  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 43152049 - 43152106
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  43152049 aatcttttaaaatcttcaagactttgtttgctaaaatagtcttttaaaatctcaatcc 43152106  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 53287472 - 53287538
Alignment:
Q  115 taactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||| ||||||||||| ||||||||||||||   |||||||||||||||||||| ||||||||    
T  53287472 taacttttcaatgaattgaatgcacaaaattttagagaatatttcttcttttggatttcttaacatg 53287538  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 34290252 - 34290177
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| |||||| ||||||||||||| || |||||| |||||||||||| |||||| ||||| ||||||    
T  34290252 atcaatacaatcacacaaagtcttttaaaatctgcaggattttatttgccaaaataatcttttgaaatcccaatcc 34290177  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 36054095 - 36054020
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||||||||    
T  36054095 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatcc 36054020  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 45214169 - 45214094
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| |||||||||| | ||||| |||||||||||||    
T  45214169 atcaatacaatcacacaaagtcttttaaaatctttaagattttttttgccaaaacaatctttcaaaatctcaatcc 45214094  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 24657302 - 24657224
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||||||||||||||| |||||||  ||||||||||||| | |||||||||  |||| |||| |||||||| ||||||    
T  24657302 atctttaactttttaataaattgaatacacaaaattttagaaaatatttctttctttgaatttcttaacatgtgtccta 24657224  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 27593965 - 27594023
Alignment:
Q  37 aatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||    
T  27593965 aatcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatcc 27594023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 36786921 - 36786982
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaa 84  Q
    |||||||||||||||||   |||||||||||||||  ||||||||| ||||||||||||||||||    
T  36786921 tcaatataatctcacaa---cttttaaaatcttcaaaattttgttttccaaaatagtcttttaaa 36786982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 30732843 - 30732911
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||   |||||||||||  | |||||||||||||||| ||| ||||||||    
T  30732843 tttaactttttaatgaattgaatttacaaaattttaaaaaatatttcttcttttgggtttcttaacatg 30732911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 2124790 - 2124715
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| ||||||||||| |||| |||||| |||  ||||| |||||||||||||||||||||    
T  2124790 atcaatacaatccaacaaagtcttttaaaattttcaagattttttttatcaaaacagtcttttaaaatctcaatcc 2124715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 24149922 - 24149847
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||  ||||| || ||||||||||||| |||||| | |  ||||||||||||||||||||| |||||    
T  24149922 atcaatataatccaacaaagtcatttaaaatcttcaagattttttctatcaaaatagtcttttaaaatcttaatcc 24149847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 30589846 - 30589921
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  30589846 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 30589921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 14978546 - 14978616
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctca 90  Q
    |||||||||||| ||||| ||||||||||||||||  ||||  ||||| |||||  |||||||||||||||    
T  14978546 tcaatataatcttacaaagtcttttaaaatcttcagaatttgatttgctaaaatgttcttttaaaatctca 14978616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 32733685 - 32733746
Alignment:
Q  120 ttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||| ||||||| ||| || | ||||||||| |||||||||| ||||||||    
T  32733685 ttttaatgaattgaatgcacaaagtttaagaaaatatttctttttttggatttcttaacatg 32733746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 46223391 - 46223318
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||    
T  46223391 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaat 46223318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 28392216 - 28392160
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    |||||||||||||||||| |||||| |||||||||||||    ||||||||||||||    
T  28392216 atctttaactttttaatgtattgaatgcacaaaattttaaagaatatttcttctttt 28392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 45254640 - 45254572
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||    
T  45254640 atcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatc 45254572  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 10661196 - 10661283
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccc 105  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||  ||||| ||| ||||||    
T  10661196 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatacatcccc 10661283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 12789947 - 12789876
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||| |||||||  || |||||||||| | |||||| ||||||||  ||| ||||||||    
T  12789947 atctttaactttttaataaattgaatacataaaattttagaaaatatttattcttttgagtttcttaacatg 12789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 23360578 - 23360653
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||| |||||||||||    
T  23360578 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatcc 23360653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 23367418 - 23367493
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||| |||||||||||    
T  23367418 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatcc 23367493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 26556868 - 26556943
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||| | |||||| | |  ||||| |||||||||||||||||||||    
T  26556868 atcaatacaatcgaacaaagtcttttaaaatctttaagattttttctatcaaaacagtcttttaaaatctcaatcc 26556943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 20379075 - 20379145
Alignment:
Q  111 tctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||| |||| |||||| ||||||||||||||   | |||||||||||||  ||| ||||||||    
T  20379075 tctttaacttttaaatgcattgaatgcacaaaattttagagaacatttcttcttttgagtttcttaacatg 20379145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 26292635 - 26292574
Alignment:
Q  33 acaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||| |||||||||||||||| ||| || | |  ||||| |||||||||||||||||||||    
T  26292635 acaaagtcttttaaaatcttcaagatattttctatcaaaacagtcttttaaaatctcaatcc 26292574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 28845650 - 28845706
Alignment:
Q  40 cttttaaaatcttcatga--ttttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||| ||  |||| |||| |||||||||||||||||| ||||||||    
T  28845650 cttttaaaatcttcaagactttttttttgtcaaaatagtcttttaaaacctcaatcc 28845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 31645449 - 31645360
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||| |||||||||||||| ||||| ||| | |||||||    
T  31645449 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcttaatccaatacaccccctta 31645360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 38628891 - 38628830
Alignment:
Q  33 acaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||| ||||||||||| |||| |||||| | |  ||||| |||||||||||||||||||||    
T  38628891 acaaagtcttttaaaattttcaagattttttctatcaaaagagtcttttaaaatctcaatcc 38628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 41519573 - 41519520
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttct 163  Q
    |||||||| |||||||| |||| || ||||||| |||||||| |||||||||||    
T  41519573 atctttaattttttaatcaattaaatgcacaaagttttaggaaatatttcttct 41519520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 20833907 - 20833975
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||| ||| |||||||||||||||| | || ||| |||   |||||||||||||||||||    
T  20833907 atcaatacaatcttacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 20833975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 36673345 - 36673277
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  36673345 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 36673277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 42791135 - 42791068
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||| |||||||||||||||| |||||||| |||||   |||||||||||||| | ||| ||||||||    
T  42791135 tttaagtttttaatgaattgaatgcacaaaa-tttagagaatatttcttctttttggtttcttaacatg 42791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44707954 - 44708014
Alignment:
Q  27 aatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||||||| |||||||||||||| | |||||| |||   |||||| ||||||||||||    
T  44707954 aatctcacaaagtcttttaaaatcttaaagattttttttattaaaataatcttttaaaatc 44708014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 52617172 - 52617104
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||||| |||||||||||||| | || ||| |||   ||||| |||||||||||||    
T  52617172 atcaatacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatc 52617104  T

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Target: chr4 (Bit Score: 50; Significance: 8e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 16654187 - 16654256
Alignment:
Q  24 tataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||||||    
T  16654187 tataatctcacaaaatcttttaaaatcttcaggattttgttttcaaaaatagtttattaaaatctcaatc 16654256  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 26740822 - 26740893
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||| |||| ||| ||||    
T  26740822 atctttaactttttaatgaattgaatgcacaaaattttagagaatatttcttcttttgaatttcttagcatg 26740893  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 41236094 - 41236023
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||| |||| || |||||||||||||  | |||||||||||||| ||||||||||||||    
T  41236094 atctttaactttttaataaattaaatgcacaaaattttataaaatatttcttcttttagattttttaacatg 41236023  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 47388526 - 47388597
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||| ||||||||||||||| | ||||||||||||   |||||||||||||||||||| ||||||||    
T  47388526 atctttaaccttttaatgaattgaatgtacaaaattttagagaatatttcttcttttggatttcttaacatg 47388597  T

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Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 55323019 - 55322948
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||||| |||||||||||||  | ||||||||||||| || ||| ||||||||    
T  55323019 atctttaactttttaatgaattgaatgcacaaaattttaaaaaatatttcttctttggggtttcttaacatg 55322948  T

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Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 49250117 - 49250047
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    ||||||||||||||||||||||||| |||||||||||||    |||||| ||||||||||||| |||||||    
T  49250117 atctttaactttttaatgaattgaatgcacaaaattttaatgaatatttattcttttggatttcttaacat 49250047  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 54510579 - 54510636
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||  || ||| |||| |||||||||||||||||||||||||||    
T  54510579 aatcttttaaaatcttccagactttttttgtcaaaatagtcttttaaaatctcaatcc 54510636  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 8171110 - 8171177
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||||||||| ||||||| |||||||||||||    |||||||||||||||  |||||||||||    
T  8171110 tttaactttttaataaattgaatgcacaaaattttaatgaatatttcttcttttgagttttttaacat 8171177  T

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Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 8583086 - 8583011
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  8583086 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 8583011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 42315883 - 42315958
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  42315883 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 42315958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 50328450 - 50328379
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||| | ||||||||||||||   ||||||||| ||| || ||| ||||||||    
T  50328450 atctttaactttttaatgaattggatgcacaaaattttagagaatatttcttttttggggtttcttaacatg 50328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 53272848 - 53272923
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| |||||| ||||||||||||| ||  ||||||||| |||||||| ||| |||||||| ||||||    
T  53272848 atcaatagaatcacacaaagtcttttaaaatctgcagaattttgttttccaaaataatctcttaaaatcccaatcc 53272923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3434912 - 3434839
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |   ||||||||||||||||||||||||    
T  3434912 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctattaaaatagtcttttaaaatctcaat 3434839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 7808999 - 7809088
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||  ||||||||||||||||||||| ||| | |||||||    
T  7808999 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaccagtcttttaaaatctcaatccaatacaccccctta 7809088  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 42674082 - 42674159
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtcct 187  Q
    |||||||| |||||||||| ||||| |||||||||||||  | ||||||||||||||   ||| |||||||| |||||    
T  42674082 atctttaattttttaatgagttgaatgcacaaaattttataaaatatttcttcttttaagtttcttaacatgtgtcct 42674159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 44930624 - 44930685
Alignment:
Q  33 acaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||| |||||||||||||| | |||||| |||  ||||| |||||||||||||||||||||    
T  44930624 acaaagtcttttaaaatctttaagattttttttatcaaaacagtcttttaaaatctcaatcc 44930685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 47686840 - 47686897
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||||||||| || ||| |||  |||||||||||||||||||||||||||    
T  47686840 aatctttcaaaatcttcaagactttttttatcaaaatagtcttttaaaatctcaatcc 47686897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 52110261 - 52110333
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | || || |||||||||||    
T  52110261 atcaatacaatcgcacaaaatcttttaaaatctttaagatttt-tttgccaaaacaatcgttcaaaatctcaat 52110333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 5807428 - 5807360
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||| ||||||||||||| || |||||||||||||  | |||||| |||||||| |||| ||||||||    
T  5807428 tttaattttttaatgaattaaatgcacaaaattttaaaaaatattttttcttttgaatttcttaacatg 5807360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 23988206 - 23988274
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   |||||||||||||||||||    
T  23988206 atcaatacaatctcacatattcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatc 23988274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 46393209 - 46393277
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||| ||||||||||||||||| ||||| ||||||||   |||||| ||||||||| ||| ||||||||    
T  46393209 tttacctttttaatgaattgaatgcacacaattttagagaatatttattcttttggttttcttaacatg 46393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 14593671 - 14593596
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||| |||||||| |||| || ||| |||||||||  | |||||||||||||| |||||||||| ||||| ||||    
T  14593671 tttaaatttttaatcaattaaatgcataaaattttaaaaaatatttcttcttttagattttttaatatgggcccta 14593596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 53133531 - 53133602
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||| |||||||||| ||||| || ||||||||||  | |||||||||||||| | ||| ||||||||    
T  53133531 atctttaaatttttaatgagttgaatgcgcaaaattttataaaatatttcttcttttaggtttcttaacatg 53133602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 16067850 - 16067812
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaatttta 148  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  16067850 atctttaactttttaatgaattgaatacacaaaatttta 16067812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 49834058 - 49833976
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaatcctatata 100  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||  ||||| |||||    
T  49834058 atcaatacaatctcacataatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatccaatata 49833976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 7820950 - 7821039
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||  ||||| |||||||||||||||| || ||| | |  ||||  ||||||||||||||||||||| ||| | |||||||    
T  7820950 atcaatacaatccaacaaagtcttttaaaatcttcaagaatttttctatcaaatcagtcttttaaaatctcaatccaatacaccccctta 7821039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 10600699 - 10600650
Alignment:
Q  45 aaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||  ||||| |||||||||| |||||||||||||||| ||||    
T  10600699 aaaatcttcagaattttatttgccaaaacagtcttttaaaatctcgatcc 10600650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 32323078 - 32323147
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||    
T  32323078 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 32323147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 32683220 - 32683131
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||  ||||| ||| | |||||||    
T  32683220 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacaccccctta 32683131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 4442286 - 4442354
Alignment:
Q  112 ctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    ||||||||||||| ||||||||| ||| | ||||||||   |||||||||||||| | ||| |||||||    
T  4442286 ctttaactttttagtgaattgaatgcaaataattttagagaatatttcttctttttgttttcttaacat 4442354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 27769073 - 27769141
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  27769073 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 27769141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 28846206 - 28846166
Alignment:
Q  68 caaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||||||||||||||||||||||| ||| | |||||||    
T  28846206 caaaatagtcttttaaaatctcaatccaatacaccccctta 28846166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 29649215 - 29649147
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  29649215 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 29649147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 37056240 - 37056296
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    |||||||||||||||||||||||||  ||||||| |||||   ||| ||||||||||    
T  37056240 atctttaactttttaatgaattgaatacacaaaactttagagaataattcttctttt 37056296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 38234612 - 38234680
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||    
T  38234612 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatc 38234680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 45891354 - 45891410
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    |||||||||||||||||||||| |  ||||||||||||||   |||| |||||||||    
T  45891354 atctttaactttttaatgaattaattgcacaaaattttagagaatatatcttctttt 45891410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 48622319 - 48622251
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||| | || || ||||||||||||||   |||||||||||||| | ||| ||||||||    
T  48622319 tttaactttttaatcatttaaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatg 48622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 35165659 - 35165716
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  35165659 aatcttttaaaatcttcatgactttttttaccaaaatagtcttttaaaatctcaatcc 35165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 10008442 - 10008385
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||    
T  10008442 aatcttttaaaatattctggactttgtttgccaaaatagtcttttaaaatctcaatcc 10008385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 11842342 - 11842271
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||| |||||||| | ||||||||| ||||||||||||||   |||||||||||||||||||| ||||||||    
T  11842342 atctgtaacttttcagtgaattgaatgcacaaaattttagagaatatttcttcttttggatttcttaacatg 11842271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 10262887 - 10262818
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||||||||||||||| ||||||||||||||    ||||  ||||| ||||||||||| ||||||||||||    
T  10262887 atcaatataatctcacaaagtcttttaaaatctt----atttgatttgctaaaatagtcttataaaatctcaat 10262818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 3109435 - 3109360
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  3109435 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 3109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 4844471 - 4844538
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||||||||| ||||||| |||||||||||||  | |||||||||||||| | ||| |||||||    
T  4844471 tttaactttttaataaattgaatgcacaaaattttaaaaaatatttcttcttttaggtttcttaacat 4844538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 29864837 - 29864762
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  29864837 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 29864762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 2617056 - 2617125
Alignment:
Q  112 ctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||| |||||||| |||||| ||| ||||||||||   |||||| ||||||| ||||||||||||||    
T  2617056 ctttaacgttttaatgtattgaatgcataaaattttagagaatatttattcttttagattttttaacatg 2617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6475828 - 6475755
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||    
T  6475828 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaat 6475755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 9318780 - 9318848
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||| |||| ||| ||||||| ||||||||||||||   ||||||||||||||| |||| ||||||||    
T  9318780 tttaatttttgaataaattgaatgcacaaaattttagagaatatttcttcttttgaatttcttaacatg 9318848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 24548061 - 24548005
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    ||||||||||||||||||||||||| ||||| ||||||||   |||||| |||||||    
T  24548061 atctttaactttttaatgaattgaatgcacataattttagagaatattttttctttt 24548005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 30323118 - 30323078
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttagg 150  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  30323118 atctttaactttttaatgaattgaatgcactaaattttagg 30323078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 13243821 - 13243882
Alignment:
Q  120 ttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||| | ||||| ||| || | ||||||||| |||||||||| ||||||||    
T  13243821 ttttaatgaattgaatgtacaaagtttaagaaaatatttctttttttggatttcttaacatg 13243882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 17515406 - 17515337
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaaca 179  Q
    ||||||||||||||||| |||| || | ||||||||||||   |||||||||||||| | ||| ||||||    
T  17515406 atctttaactttttaatcaattaaatgtacaaaattttagagaatatttcttcttttaggtttcttaaca 17515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 27585270 - 27585205
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaa 84  Q
    ||||||| ||||||||| | |||||||||||||| | |||||| |||   ||||||||||||||||    
T  27585270 atcaataaaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaa 27585205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 7104533 - 7104601
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||    
T  7104533 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatc 7104601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 8790097 - 8790029
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| |||| |||||| |||||||||||||| | || ||| ||||  |||| ||||||||||||||    
T  8790097 atcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaaaaagtcttttaaaatc 8790029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 31068429 - 31068497
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  31068429 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 31068497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 20009728 - 20009657
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||| ||||||||| || ||||||| |||||||||||||| | ||||||||||||||| |||||||||||||    
T  20009728 atctgtaacttttttataaattgaatgcacaaaattttagaaaatatttcttcttttgaattttttaacatg 20009657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 32631550 - 32631603
Alignment:
Q  41 ttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  32631550 ttttaaaatcttcatgactttttttgccaaaatagtctttcaaaatctcaatcc 32631603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 30111794 - 30111882
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctt 107  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||||||||||||||||||||||||| ||| | ||||||    
T  30111794 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatccaatacaccccctt 30111882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 27417733 - 27417658
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||| ||||| |||||||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  27417733 atcaatacaatctaacaaagtcttttaaaatcttcaagattttttctatcaaaatactcttttaaaatctcaatcc 27417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 41061223 - 41061278
Alignment:
Q  39 tcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||    
T  41061223 tcttttaaaatctgcaagattttgtttgccaaaatagtcttttgaaatcccaatcc 41061278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 42677332 - 42677257
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | ||||  |||||||||||||    
T  42677332 atcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatcc 42677257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 39300494 - 39300436
Alignment:
Q  37 aatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||    
T  39300494 aatcttttaaaatcttcaagacttttttttgtcaaaatagtcttttaaaatctcaatcc 39300436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 47912609 - 47912523
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccc 105  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||| ||||| ||||    
T  47912609 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatataccccc 47912523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 47032339 - 47032396
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||||||||||    
T  47032339 aatcttttaaaatcttcaagactttatttatcaaaatagtcttttaaaatctcaatcc 47032396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 36827883 - 36827815
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||| ||||||||||||| ||||||||||||||   |||||||||||||| | ||| ||||||||    
T  36827883 tttaacttattaatgaattgaatgcacaaaattttagagaatatttcttcttttaggtttcttaacatg 36827815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 152862 - 152937
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  152862 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 152937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 34114626 - 34114551
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| |||||| |||||||||||||| | |||||| | |||||||| ||||||| |||||| ||||||    
T  34114626 atcaatacaatcacacaaagtcttttaaaatctttaagattttttctgccaaaacagtctttcaaaatcccaatcc 34114551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 36354718 - 36354664
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  36354718 aatcttttaaaatcttcatgacttt-tttatcaaaatagtcttttaaaatctcaat 36354664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 42306344 - 42306277
Alignment:
Q  114 ttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||| ||||||||||||||    ||||||||||||||  ||| ||||||||    
T  42306344 ttaactttttaatgaattgaatgcacaaaattttagagagtatttcttcttttgagtttcttaacatg 42306277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 46197190 - 46197115
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||| ||| ||| ||||||||||||| ||  ||||| |||| ||||| | |||||||||||||||||||    
T  46197190 atcaatataatttcataaagtcttttaaaatctccaatattttatttgtcaaaacaatcttttaaaatctcaatcc 46197115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 48136447 - 48136360
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccct 106  Q
    ||||||| ||||||||| ||| |||||||||||| | |||||| |||   |||||||||||||||||||  ||||| ||||| |||||    
T  48136447 atcaatacaatctcacacaatattttaaaatcttgaagattttttttattaaaatagtcttttaaaatcctaatccaatataccccct 48136360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 676292 - 676361
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    ||||||||  ||||||||||||||| ||||||||||| |||  ||||||||| |||||||||| |||||||    
T  676292 atctttaatgttttaatgaattgaatgcacaaaatttaagggaatatttctt-ttttggatttcttaacat 676361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 23358507 - 23358585
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||||||| |||| |||||||||| ||||| |||||||  | ||||||||||||||   |||||||||||| ||||||    
T  23358507 atctttaaccttttcatgaattgaatgcacacaattttaaaaaatatttcttcttttaagttttttaacatgtgtccta 23358585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 33475538 - 33475612
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||    
T  33475538 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatc 33475612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 12252471 - 12252382
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | ||||||||||||||||||| ||| | |||||||    
T  12252471 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacaatcttttaaaatctcaatccaatacaccccctta 12252382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 31495340 - 31495409
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttg-ccaaaatagtcttttaaaatctcaatcctatatatcccc 105  Q
    ||||||||||||||||||  | ||| |||| |||||||||| ||||||||||||||||| ||| ||||||    
T  31495340 aatcttttaaaatcttcaaaactttctttggccaaaatagtattttaaaatctcaatccaatacatcccc 31495409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 11042523 - 11042559
Alignment:
Q  57 attttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11042523 attttgtttgccaaaataatcttttaaaatctcaatc 11042559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 25971501 - 25971568
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||| |||||||||||||||| ||||||||||||||   ||||||||| |||| ||||| ||||||||    
T  25971501 tttaattttttaatgaattgaatgcacaaaattttagtgaatatttctt-tttttgatttcttaacatg 25971568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35089182 - 35089110
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaa 91  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||    
T  35089182 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaa 35089110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 40098256 - 40098300
Alignment:
Q  20 tcaatataatctcacaaaatcttttaaaatcttcatgattttgtt 64  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||    
T  40098256 tcaatataatcttacaaaatcttttaaaatcttcaaaattttgtt 40098300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 48633740 - 48633684
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatc 93  Q
    ||||||||||||| ||||  | ||| |||||||||||||||||||||||| ||||||    
T  48633740 aatcttttaaaattttcaaaactttttttgccaaaatagtcttttaaaatatcaatc 48633684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 17354422 - 17354493
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||| |||| || ||| |||||||||    |||||||||||||||| ||| ||||||||    
T  17354422 atctttaactttttaatcaattaaatgcataaaattttatagaatatttcttcttttgggtttcttaacatg 17354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 28343319 - 28343394
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   ||||||||||||||||||| ||||||    
T  28343319 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcccaatcc 28343394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 37828404 - 37828471
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||||||||| ||||||| ||||||||||| ||   |||||||||||||| | ||| |||||||    
T  37828404 tttaactttttaataaattgaatgcacaaaatttaagagaatatttcttcttttaggtttcttaacat 37828471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 48633996 - 48633958
Alignment:
Q  111 tctttaactttttaatgaattgaaagcacaaaattttag 149  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  48633996 tctttaactttttaatgaattgaatgcataaaattttag 48633958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 3622276 - 3622333
Alignment:
Q  123 taatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||||||| |||||||||||||  | ||||||||||||||  |||| |||||||    
T  3622276 taatgaattgaatgcacaaaattttaaaaaatatttcttcttttaaatttcttaacat 3622333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 25295307 - 25295270
Alignment:
Q  28 atctcacaaaatcttttaaaatcttcatgattttgttt 65  Q
    |||||||||||||||||||||||||| | |||||||||    
T  25295307 atctcacaaaatcttttaaaatcttcgtaattttgttt 25295270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 29893965 - 29894034
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| |||||||||||||||| | || |||| |||   |||||||||||||||||||    
T  29893965 atcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 29894034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 43056773 - 43056700
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaat 92  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| | |||||||||||||||||    
T  43056773 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttttaaaatctcaat 43056700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 12741382 - 12741458
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||| |||||    
T  12741382 atcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatcc 12741458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 18839303 - 18839371
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| |||||||||||||||| | || ||| |||   |||||| ||||||||||||    
T  18839303 atcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaataatcttttaaaatc 18839371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 23102300 - 23102368
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  23102300 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 23102368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 30823596 - 30823664
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| | |||||||||||||| | || ||| |||   |||||||||||||||||||    
T  30823596 atcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 30823664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 6901423 - 6901366
Alignment:
Q  37 aatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||    
T  6901423 aatcttttaaaatcttcaaaactttttttgccaaaatagtcttttaaaatctcaatcc 6901366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 18677002 - 18676941
Alignment:
Q  33 acaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    |||||||||||||||||||||| |||||| | |  |||||||||||||||||||||||||||    
T  18677002 acaaaatcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatcc 18676941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 14575999 - 14575931
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||||||||||| |||||||||||||| | |||||| ||||||||  ||| ||||||||    
T  14575999 tttaactttttaatgaattgaatgcacaaaattttagtaaatattttttcttttgagtttcttaacatg 14575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 40298333 - 40298262
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||| ||||||||||||||| |||||||||||||| | |||||| |||||||  |||| ||||||||    
T  40298333 atctttaacattttaatgaattgaatgcacaaaattttagaaaatatttattcttttaaatttcttaacatg 40298262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 13949886 - 13949800
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccc 105  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||| ||| ||||||    
T  13949886 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacatcccc 13949800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 19961604 - 19961674
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||| |||||||| ||||||| |||||||||||||    |||||||||||||||||||| |||||||    
T  19961604 atctttaattttttaataaattgaatgcacaaaattttaaagaatatttcttcttttggatttcttaacat 19961674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 10553737 - 10553822
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccc 104  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||| ||| |||||    
T  10553737 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaatacatccc 10553822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 1352833 - 1352904
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||||||||||||||| |||||| |||| ||   |||||| ||||||| ||||| ||||||||    
T  1352833 atctttaactttttaatgaattgaatgcacaatatttaagagaatattttttctttttgatttcttaacatg 1352904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 11632771 - 11632696
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  11632771 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 11632696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 36527477 - 36527547
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||| ||| ||||||| ||||||||||||||   |||||| ||||||||||||| ||||||||    
T  36527477 atctttaactttt-aataaattgaatgcacaaaattttagagaatatttattcttttggatttcttaacatg 36527547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30685636 - 30685698
Alignment:
Q  119 tttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||||||| |||||||||||||  | ||||||||||||||  |||| ||||||||    
T  30685636 tttttaatgaattgaatgcacaaaattttataaaatatttcttcttttaaatttcttaacatg 30685698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 26629583 - 26629506
Alignment:
Q  33 acaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccccttata 110  Q
    ||||||||||||||||| |||| || ||| |    ||||||||||||||||||||||||||| ||| | |||||||||    
T  26629583 acaaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaatacagccccttata 26629506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 28574883 - 28574822
Alignment:
Q  120 ttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||||||||||| || ||||||| ||| || | ||||||||| |||||||||||||||||||    
T  28574883 ttttaatgaattaaatgcacaaagtttaagaaaatatttctttttttggattttttaacatg 28574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 13717104 - 13717172
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||| ||||||||| |||||||||||||||| | || ||| |||   |||||||||||||||||||    
T  13717104 atcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatc 13717172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 13951173 - 13951117
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    ||||||||||||||||| |||| || ||||||||||| |||| ||||||||| ||||    
T  13951173 atctttaactttttaatcaattaaatgcacaaaatttaaggaaatatttcttttttt 13951117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 40411418 - 40411494
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtt-tgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| || |  ||||| |||||||||||||||||||||    
T  40411418 atcaatacaatccaacaaagtcttttaaaatcttcaagatttttttctatcaaaacagtcttttaaaatctcaatcc 40411494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 10553524 - 10553449
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||| ||||||||||||    
T  10553524 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtctttttaaatctcaatcc 10553449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 15591732 - 15591693
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttag 149  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  15591732 atctttaattttttaatgaattgaatgcacaaaattttag 15591693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 42011310 - 42011377
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacat 180  Q
    |||||||||||| |||||| || |||||||||||||    ||| |||||||||||||||| |||||||    
T  42011310 tttaactttttagtgaattaaatgcacaaaattttatagaatacttcttcttttggatttcttaacat 42011377  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 7406295 - 7406217
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||||| ||||||||||| ||||| ||| |||||||||  | ||||||||||||||   ||| |||||||| ||||||    
T  7406295 atctttagctttttaatgagttgaatgcataaaattttataaaatatttcttcttttatgtttcttaacatgtgtccta 7406217  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 25983113 - 25983191
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||||||||||| ||  ||||||| ||||||||||||||   |||||| ||||||| | ||| |||||||| ||||||    
T  25983113 atctttaacttttcaaaaaattgaatgcacaaaattttagagaatatttattcttttaggtttcttaacatgtgtccta 25983191  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 40459356 - 40459310
Alignment:
Q  48 atcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||||||||| | ||||||| |||||||||||||||||    
T  40459356 atcttcaggattttgtttgtcgaaatagttttttaaaatctcaatcc 40459310  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 2275354 - 2275266
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatcccctta 108  Q
    ||||||| |||| |||||| |||||||||||||| | |||| | ||| || ||||| |||||||||||| |||||| ||| | |||||||    
T  2275354 atcaatacaatcacacaaagtcttttaaaatctttaagattcttttttcc-aaataatcttttaaaatcccaatccaatacaccccctta 2275266  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 3938466 - 3938515
Alignment:
Q  119 tttttaatgaattgaaagcacaaaattttaggatatatttcttcttttgg 168  Q
    |||||||||||||||| ||| |||||||||  | ||||||||||||||||    
T  3938466 tttttaatgaattgaatgcataaaattttaaaaaatatttcttcttttgg 3938515  T

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Target: scaffold0472 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 1023 - 948
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||| | ||||  |||||||||||||    
T  1023 atcaatacaatcacacaaaatcttttaaaatctttaagattttttttgccaaaacaatcttgcaaaatctcaatcc 948  T

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Target: scaffold0153 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 33910 - 33815
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcctatatatccccttatatctt 114  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| ||||||||||||||||||||| ||| | ||||||| |||||    
T  33910 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatccaatacacccccttaaatctt 33815  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 37254 - 37321
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    ||||||||||||| |||||||| |||||||||||||  | |||||||||||||| | ||||||||||||    
T  37254 tttaactttttaaagaattgaatgcacaaaatttta-aaaatatttcttcttttaggttttttaacatg 37321  T

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Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 20532 - 20457
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  20532 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcc 20457  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 80878 - 80803
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatgattttgtttgccaaaatagtcttttaaaatctcaatcc 94  Q
    ||||||| ||||  ||||| |||||||||||||||| |||||| | |  ||||| |||||||||||||||||||||    
T  80878 atcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatcc 80803  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 66201 - 66254
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttctttt 166  Q
    |||||||||||| ||||||||| ||||||||||||||   ||||||||||||||    
T  66201 tttaactttttagtgaattgaatgcacaaaattttagagaatatttcttctttt 66254  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 50679 - 50608
Alignment:
Q  110 atctttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatg 181  Q
    |||| ||| |||||||| |||| || ||||||||||||||   |||||||||||||||| ||| ||||||||    
T  50679 atctctaagtttttaatcaattaaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatg 50608  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 223707 - 223782
Alignment:
Q  113 tttaactttttaatgaattgaaagcacaaaattttaggatatatttcttcttttggattttttaacatgggtccta 188  Q
    ||||| |||||||| |||| || ||| |||||||||  | |||||||||||||| |||||||||| ||||| ||||    
T  223707 tttaaatttttaatcaattaaatgcataaaattttaaaaaatatttcttcttttagattttttaatatgggcccta 223782  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 36486 - 36417
Alignment:
Q  19 atcaatataatctcacaaaatcttttaaaatcttcatga-ttttgtttgccaaaatagtcttttaaaatc 87  Q
    ||||||||||||||||| | |||||||||||||| | || |||| |||   |||||||||||||||||||    
T  36486 atcaatataatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatc 36417  T

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