View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3062_high_39 (Length: 238)
Name: NF3062_high_39
Description: NF3062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3062_high_39 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29967128 - 29967364
Alignment:
| Q |
1 |
cacacggaatttgtttgatctataacttagatgtcatacatcaagtcatgagggctgtaagcatacacgacctctcatctaatattgaccttttgaaaat |
100 |
Q |
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| T |
29967128 |
cacacggaatttgtt-gatctataacttatatgtcatacatcaagtcatgagggctgtaagcatacacgacctctcatctaatattgaccttttgaaaat |
29967226 |
T |
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| Q |
101 |
agttttaagaatgacatttatcatttttaatagnnnnnnnnnnttatattaataagtagtggtcggagtttgaacctctaatttttaatttattcatttt |
200 |
Q |
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| T |
29967227 |
aattttaagaatgacatttattatttttaatagaaaaaaaaaattatattaataagtagcggtcggggtttgaacctctaatttttaatttattcatttt |
29967326 |
T |
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| Q |
201 |
aaggaattaaattttggtcactacactatttgattcat |
238 |
Q |
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||||||||||||||||||||||||||||||| |||||| |
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| T |
29967327 |
aaggaattaaattttggtcactacactatttaattcat |
29967364 |
T |
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