View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3062_low_18 (Length: 341)

Name: NF3062_low_18
Description: NF3062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3062_low_18
NF3062_low_18
[»] chr6 (44 HSPs)
chr6 (19-341)||(1402973-1403294)
chr6 (202-331)||(281802-281931)
chr6 (226-315)||(2205569-2205657)
chr6 (202-309)||(2455819-2455926)
chr6 (232-337)||(2117384-2117489)
chr6 (276-333)||(24838771-24838828)
chr6 (271-331)||(28088245-28088305)
chr6 (202-330)||(32171455-32171583)
chr6 (228-337)||(7785724-7785831)
chr6 (202-303)||(2460105-2460206)
chr6 (201-253)||(32917262-32917314)
chr6 (238-337)||(283076-283175)
chr6 (226-337)||(2027384-2027495)
chr6 (202-253)||(27595521-27595572)
chr6 (237-331)||(4246397-4246491)
chr6 (210-331)||(8364938-8365059)
chr6 (232-329)||(30523649-30523745)
chr6 (269-325)||(1401102-1401158)
chr6 (268-328)||(3168281-3168341)
chr6 (291-331)||(5623143-5623183)
chr6 (268-331)||(1275136-1275199)
chr6 (226-309)||(2034424-2034507)
chr6 (298-341)||(7485118-7485161)
chr6 (202-321)||(33067155-33067274)
chr6 (214-264)||(2027764-2027814)
chr6 (202-336)||(7148648-7148782)
chr6 (225-311)||(8010364-8010450)
chr6 (237-331)||(9667974-9668068)
chr6 (295-341)||(28660807-28660853)
chr6 (282-340)||(31324434-31324492)
chr6 (240-337)||(3155157-3155253)
chr6 (299-336)||(3204593-3204630)
chr6 (279-328)||(7149504-7149553)
chr6 (202-279)||(7901785-7901861)
chr6 (202-303)||(8420151-8420252)
chr6 (202-331)||(10616496-10616624)
chr6 (206-311)||(31686321-31686426)
chr6 (202-311)||(32171337-32171446)
chr6 (210-307)||(34939755-34939852)
chr6 (295-331)||(4006701-4006737)
chr6 (301-337)||(10452413-10452449)
chr6 (263-331)||(25100030-25100098)
chr6 (305-341)||(33217479-33217515)
chr6 (202-262)||(33385585-33385645)
[»] chr5 (48 HSPs)
chr5 (202-327)||(32172644-32172769)
chr5 (202-326)||(25079522-25079639)
chr5 (202-326)||(25137491-25137608)
chr5 (268-341)||(7319383-7319456)
chr5 (202-331)||(10272385-10272514)
chr5 (237-334)||(18704025-18704122)
chr5 (203-331)||(2568645-2568773)
chr5 (213-337)||(14295487-14295611)
chr5 (204-336)||(29336613-29336744)
chr5 (202-331)||(39257348-39257470)
chr5 (210-331)||(37690598-37690720)
chr5 (210-331)||(37526161-37526282)
chr5 (210-331)||(37588322-37588443)
chr5 (202-326)||(4619699-4619823)
chr5 (281-337)||(7319325-7319381)
chr5 (207-315)||(11457102-11457209)
chr5 (235-331)||(29588866-29588962)
chr5 (202-337)||(28586720-28586855)
chr5 (246-325)||(34975357-34975436)
chr5 (208-315)||(37611175-37611282)
chr5 (208-315)||(37787905-37788012)
chr5 (229-312)||(40205055-40205138)
chr5 (202-337)||(41016160-41016294)
chr5 (210-331)||(7674635-7674756)
chr5 (282-331)||(15309027-15309076)
chr5 (276-333)||(32408620-32408677)
chr5 (288-336)||(34245706-34245754)
chr5 (202-253)||(11700332-11700383)
chr5 (268-331)||(18543217-18543279)
chr5 (282-333)||(34117570-34117621)
chr5 (268-331)||(35553208-35553271)
chr5 (202-253)||(38047833-38047884)
chr5 (282-341)||(39105441-39105500)
chr5 (268-331)||(19138737-19138802)
chr5 (202-339)||(25720371-25720509)
chr5 (208-341)||(26390749-26390883)
chr5 (295-337)||(26516381-26516423)
chr5 (276-330)||(29054896-29054950)
chr5 (295-333)||(34205224-34205262)
chr5 (300-341)||(8158353-8158394)
chr5 (282-331)||(12975334-12975383)
chr5 (223-316)||(41052870-41052963)
chr5 (295-339)||(15246812-15246856)
chr5 (296-336)||(15557295-15557335)
chr5 (271-323)||(29201528-29201580)
chr5 (268-328)||(31030150-31030210)
chr5 (244-320)||(32703272-32703348)
chr5 (281-337)||(41017708-41017764)
[»] chr7 (44 HSPs)
chr7 (203-331)||(48157075-48157203)
chr7 (208-336)||(33645920-33646049)
chr7 (204-337)||(27481250-27481383)
chr7 (289-333)||(11464039-11464083)
chr7 (196-328)||(21453284-21453415)
chr7 (300-339)||(25507328-25507367)
chr7 (212-311)||(39360030-39360129)
chr7 (202-296)||(23214877-23214971)
chr7 (295-337)||(25558238-25558280)
chr7 (295-337)||(25558436-25558478)
chr7 (298-336)||(28635032-28635070)
chr7 (288-337)||(5006549-5006598)
chr7 (202-331)||(25670540-25670669)
chr7 (292-337)||(39711450-39711495)
chr7 (271-331)||(30812135-30812195)
chr7 (268-336)||(44241841-44241909)
chr7 (288-331)||(1417251-1417294)
chr7 (208-331)||(4966143-4966266)
chr7 (290-341)||(22296270-22296321)
chr7 (276-331)||(28165078-28165133)
chr7 (202-341)||(40428532-40428671)
chr7 (290-341)||(40689028-40689079)
chr7 (227-326)||(46281119-46281218)
chr7 (199-266)||(47427254-47427321)
chr7 (207-325)||(3610699-3610817)
chr7 (205-291)||(12234846-12234932)
chr7 (268-334)||(24363621-24363687)
chr7 (282-324)||(28691869-28691911)
chr7 (295-333)||(36537905-36537943)
chr7 (225-311)||(42281491-42281577)
chr7 (282-331)||(18350741-18350790)
chr7 (276-333)||(24895341-24895398)
chr7 (300-333)||(24909649-24909682)
chr7 (288-341)||(25422327-25422380)
chr7 (300-337)||(33709429-33709466)
chr7 (276-341)||(36370646-36370711)
chr7 (268-337)||(44151500-44151569)
chr7 (288-341)||(47177613-47177666)
chr7 (202-294)||(22387850-22387942)
chr7 (202-254)||(31341199-31341251)
chr7 (271-331)||(38010701-38010761)
chr7 (295-323)||(46056057-46056085)
chr7 (282-338)||(46104336-46104392)
chr7 (209-325)||(46104528-46104644)
[»] chr2 (56 HSPs)
chr2 (209-338)||(14316106-14316235)
chr2 (202-331)||(11513885-11514012)
chr2 (203-331)||(14299586-14299714)
chr2 (215-321)||(32821806-32821912)
chr2 (244-337)||(36863621-36863714)
chr2 (242-318)||(36852472-36852548)
chr2 (205-328)||(17221497-17221620)
chr2 (288-341)||(18962078-18962131)
chr2 (247-332)||(39983328-39983413)
chr2 (282-341)||(8017411-8017470)
chr2 (202-336)||(30552597-30552732)
chr2 (213-326)||(1741997-1742110)
chr2 (202-255)||(29429711-29429764)
chr2 (240-337)||(33942131-33942228)
chr2 (271-331)||(15780064-15780124)
chr2 (290-337)||(5043602-5043649)
chr2 (202-261)||(22878155-22878214)
chr2 (258-325)||(40279190-40279257)
chr2 (283-341)||(18066105-18066163)
chr2 (202-332)||(18179194-18179324)
chr2 (238-312)||(43065440-43065514)
chr2 (288-337)||(10143153-10143202)
chr2 (276-333)||(28933809-28933866)
chr2 (208-309)||(34651996-34652097)
chr2 (288-337)||(37292387-37292436)
chr2 (276-333)||(43173207-43173264)
chr2 (276-337)||(43205290-43205351)
chr2 (202-254)||(9996802-9996854)
chr2 (242-330)||(10285848-10285936)
chr2 (289-337)||(17952742-17952790)
chr2 (239-337)||(1939323-1939421)
chr2 (293-332)||(7862739-7862778)
chr2 (202-333)||(9478284-9478415)
chr2 (284-331)||(16353848-16353895)
chr2 (283-341)||(1625877-1625935)
chr2 (202-244)||(6547248-6547290)
chr2 (203-337)||(9878637-9878771)
chr2 (223-333)||(43635076-43635186)
chr2 (238-331)||(680490-680583)
chr2 (208-309)||(37034031-37034132)
chr2 (288-337)||(37276727-37276776)
chr2 (282-331)||(37474743-37474792)
chr2 (282-338)||(41170585-41170639)
chr2 (276-325)||(43199236-43199285)
chr2 (296-341)||(44439408-44439453)
chr2 (295-331)||(9556226-9556262)
chr2 (290-330)||(9886300-9886340)
chr2 (232-331)||(13189370-13189470)
chr2 (202-242)||(17443562-17443602)
chr2 (271-331)||(22681208-22681268)
chr2 (295-331)||(25800816-25800852)
chr2 (202-315)||(31228791-31228906)
chr2 (303-331)||(33944592-33944620)
chr2 (295-327)||(34926955-34926987)
chr2 (208-316)||(35993340-35993448)
chr2 (276-328)||(38077101-38077153)
[»] chr3 (43 HSPs)
chr3 (202-341)||(25182941-25183081)
chr3 (202-326)||(43115048-43115172)
chr3 (202-329)||(11253491-11253617)
chr3 (202-317)||(37273135-37273250)
chr3 (206-331)||(14548679-14548804)
chr3 (212-337)||(27792853-27792978)
chr3 (206-331)||(36646340-36646465)
chr3 (223-331)||(28801250-28801360)
chr3 (281-337)||(43875629-43875685)
chr3 (213-341)||(21574468-21574595)
chr3 (269-341)||(48286831-48286903)
chr3 (253-311)||(44284085-44284143)
chr3 (268-329)||(23785244-23785305)
chr3 (202-311)||(30923853-30923961)
chr3 (296-341)||(37689432-37689477)
chr3 (237-329)||(24887273-24887364)
chr3 (268-331)||(1125786-1125849)
chr3 (202-309)||(22667413-22667519)
chr3 (202-309)||(22724052-22724158)
chr3 (202-309)||(26542546-26542653)
chr3 (296-331)||(41057025-41057060)
chr3 (202-337)||(41452504-41452639)
chr3 (232-326)||(41724203-41724298)
chr3 (203-337)||(2175804-2175937)
chr3 (269-323)||(2719463-2719517)
chr3 (245-331)||(34254805-34254891)
chr3 (295-337)||(38462262-38462304)
chr3 (271-333)||(51510216-51510278)
chr3 (292-341)||(16990205-16990254)
chr3 (268-341)||(21367644-21367717)
chr3 (290-331)||(21872313-21872354)
chr3 (296-337)||(24235731-24235772)
chr3 (202-311)||(31010409-31010518)
chr3 (282-331)||(33405201-33405250)
chr3 (268-341)||(45432959-45433032)
chr3 (269-334)||(47904084-47904149)
chr3 (300-337)||(48807689-48807726)
chr3 (237-337)||(2201109-2201209)
chr3 (268-331)||(2318631-2318695)
chr3 (271-331)||(19679783-19679843)
chr3 (295-331)||(22214706-22214742)
chr3 (281-341)||(34760918-34760978)
chr3 (202-258)||(49605805-49605861)
[»] chr1 (58 HSPs)
chr1 (202-337)||(4549495-4549631)
chr1 (202-307)||(32515395-32515500)
chr1 (202-331)||(44031953-44032082)
chr1 (202-330)||(31517694-31517822)
chr1 (209-331)||(15515528-15515654)
chr1 (202-311)||(23373267-23373375)
chr1 (282-331)||(25006068-25006117)
chr1 (202-333)||(15581239-15581370)
chr1 (291-337)||(4078192-4078238)
chr1 (237-331)||(6231805-6231899)
chr1 (281-331)||(25005830-25005880)
chr1 (276-337)||(5150918-5150979)
chr1 (268-337)||(8130417-8130486)
chr1 (277-330)||(17422967-17423020)
chr1 (244-337)||(27887114-27887207)
chr1 (288-337)||(42556671-42556720)
chr1 (296-337)||(48830124-48830165)
chr1 (194-321)||(3597227-3597354)
chr1 (202-337)||(44422680-44422815)
chr1 (223-309)||(3052681-3052767)
chr1 (295-337)||(12564921-12564963)
chr1 (282-331)||(7218108-7218157)
chr1 (268-337)||(30257664-30257733)
chr1 (268-325)||(35590912-35590969)
chr1 (268-341)||(37842375-37842448)
chr1 (292-337)||(45205049-45205094)
chr1 (193-337)||(4622074-4622218)
chr1 (202-330)||(12564453-12564581)
chr1 (283-331)||(17269237-17269285)
chr1 (268-332)||(23902087-23902151)
chr1 (227-326)||(30259465-30259565)
chr1 (202-269)||(1255378-1255445)
chr1 (282-325)||(1432508-1432551)
chr1 (206-253)||(4868465-4868511)
chr1 (244-335)||(7136994-7137085)
chr1 (290-341)||(9656627-9656678)
chr1 (282-337)||(10581111-10581166)
chr1 (202-253)||(26179536-26179587)
chr1 (296-331)||(27738228-27738263)
chr1 (202-253)||(40485727-40485778)
chr1 (283-337)||(40751165-40751220)
chr1 (211-341)||(52286655-52286786)
chr1 (202-332)||(17420189-17420319)
chr1 (303-341)||(18019062-18019100)
chr1 (303-337)||(29007771-29007805)
chr1 (237-331)||(30371135-30371229)
chr1 (282-324)||(33527422-33527464)
chr1 (302-331)||(13905777-13905806)
chr1 (202-331)||(15579469-15579598)
chr1 (268-329)||(25479570-25479631)
chr1 (226-311)||(27140485-27140570)
chr1 (237-330)||(28482222-28482315)
chr1 (237-331)||(28689441-28689537)
chr1 (202-250)||(5157140-5157188)
chr1 (297-341)||(6074451-6074495)
chr1 (297-333)||(28467356-28467392)
chr1 (288-328)||(29045952-29045992)
chr1 (301-337)||(46980182-46980218)
[»] chr8 (40 HSPs)
chr8 (226-326)||(6509281-6509381)
chr8 (202-338)||(39551163-39551299)
chr8 (288-331)||(31884581-31884624)
chr8 (217-311)||(4055585-4055679)
chr8 (211-337)||(42370324-42370450)
chr8 (288-341)||(24558830-24558883)
chr8 (244-331)||(11795079-11795166)
chr8 (202-337)||(11813059-11813194)
chr8 (202-337)||(30013199-30013334)
chr8 (202-253)||(30191095-30191146)
chr8 (202-341)||(7918735-7918866)
chr8 (283-337)||(10460584-10460638)
chr8 (238-328)||(11183535-11183625)
chr8 (295-337)||(29973062-29973104)
chr8 (276-337)||(9836882-9836943)
chr8 (268-337)||(28769359-28769428)
chr8 (296-337)||(35869818-35869859)
chr8 (268-317)||(39881772-39881821)
chr8 (295-331)||(9834836-9834872)
chr8 (202-261)||(12972915-12972974)
chr8 (210-309)||(14949875-14949974)
chr8 (240-291)||(27645931-27645982)
chr8 (259-326)||(35298488-35298555)
chr8 (295-341)||(11056714-11056760)
chr8 (223-309)||(25869241-25869327)
chr8 (202-308)||(29169890-29169995)
chr8 (295-341)||(29342262-29342308)
chr8 (207-337)||(31862474-31862603)
chr8 (282-320)||(32507229-32507267)
chr8 (259-309)||(36643904-36643954)
chr8 (202-255)||(4181451-4181504)
chr8 (276-341)||(4558775-4558840)
chr8 (296-337)||(6864507-6864548)
chr8 (202-331)||(7714229-7714358)
chr8 (207-304)||(44401575-44401671)
chr8 (283-331)||(13652202-13652250)
chr8 (283-331)||(13710845-13710893)
chr8 (202-242)||(24326107-24326147)
chr8 (295-331)||(34770879-34770915)
chr8 (224-280)||(37740403-37740458)
[»] chr4 (49 HSPs)
chr4 (202-331)||(2996560-2996689)
chr4 (225-333)||(27970043-27970151)
chr4 (210-337)||(23819070-23819197)
chr4 (207-330)||(50799989-50800111)
chr4 (210-300)||(6987703-6987793)
chr4 (211-329)||(11264290-11264408)
chr4 (202-303)||(27123306-27123407)
chr4 (290-337)||(927457-927504)
chr4 (202-308)||(19304557-19304663)
chr4 (202-337)||(21157749-21157884)
chr4 (210-325)||(28406905-28407020)
chr4 (246-337)||(30207569-30207660)
chr4 (210-336)||(44319931-44320057)
chr4 (223-337)||(46415767-46415881)
chr4 (268-337)||(18628563-18628632)
chr4 (296-337)||(24444019-24444060)
chr4 (305-338)||(52504445-52504478)
chr4 (290-334)||(9841050-9841094)
chr4 (205-333)||(28232530-28232658)
chr4 (268-320)||(46110201-46110253)
chr4 (292-336)||(53155245-53155289)
chr4 (268-336)||(53943588-53943656)
chr4 (290-333)||(24091448-24091491)
chr4 (298-337)||(24160545-24160584)
chr4 (204-271)||(41097212-41097279)
chr4 (282-337)||(42866049-42866104)
chr4 (296-331)||(44138727-44138762)
chr4 (268-326)||(14011226-14011284)
chr4 (288-341)||(30338631-30338685)
chr4 (295-333)||(49219124-49219162)
chr4 (266-331)||(2900327-2900392)
chr4 (296-341)||(6978757-6978802)
chr4 (300-333)||(8130159-8130192)
chr4 (296-333)||(11842200-11842237)
chr4 (288-325)||(16494845-16494882)
chr4 (268-325)||(42121481-42121538)
chr4 (288-337)||(54325077-54325126)
chr4 (232-308)||(2874608-2874684)
chr4 (203-331)||(8074750-8074878)
chr4 (271-323)||(12650307-12650359)
chr4 (202-250)||(18628507-18628555)
chr4 (295-331)||(18630667-18630703)
chr4 (295-331)||(20907334-20907370)
chr4 (208-252)||(21043195-21043239)
chr4 (301-341)||(24193562-24193602)
chr4 (301-333)||(45128363-45128395)
chr4 (297-337)||(49085970-49086010)
chr4 (301-337)||(51197534-51197570)
chr4 (297-337)||(55870390-55870430)
[»] scaffold0024 (1 HSPs)
scaffold0024 (208-331)||(27563-27686)
[»] scaffold0652 (1 HSPs)
scaffold0652 (283-336)||(2998-3051)
[»] scaffold0428 (1 HSPs)
scaffold0428 (202-262)||(3962-4022)
[»] scaffold0167 (1 HSPs)
scaffold0167 (271-319)||(17275-17323)


Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 341
Target Start/End: Complemental strand, 1403294 - 1402973
Alignment:
Q  19 cggttggtttaacaggaagcccttcatcagctaaggcagtcgggtggaactgcacaaacctgcgccaacaatgatttttagnnnnnnnnnnnnnnnntca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||    
T  1403294 cggttggtttaacaggaagcccttcatcagctaaggcagtcgggtggaactgcacaaacctgcgccaacaatgatttttagaaaaaagaaaaaaaa-tca 1403196  T
Q  119 ctatggtcgtaaaatacaataaactttatcatgaaaaacactacaagacttaacacaggtatccttattccgtcactaatgaaataagcacttgtgagac 218  Q
    | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1403195 caacggtcgtaaaatacgataaactttatcatgaaaaacactacaagacttaacacaggtatccttattccgtcactaatggaataagcacttgtgagac 1403096  T
Q  219 tgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttata 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1403095 tgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttata 1402996  T
Q  319 gcttatatgaaaatagtttaact 341  Q
    |||||||||||||||||||||||    
T  1402995 gcttatatgaaaatagtttaact 1402973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 281802 - 281931
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||||||||||| |||||||| | || ||| ||||||||||||| |||||||  | | ||||||| ||||| || || |||| | |||||||    
T  281802 ataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagct 281901  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||| |||  ||||||||||||||||||    
T  281902 tatgaacacagcttatagcttatatgaaaa 281931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 2205569 - 2205657
Alignment:
Q  226 gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaattt 315  Q
    ||||| |||| ||||||| ||| ||||| | |||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||||||    
T  2205569 gagagcttatggaaacaa-ttaggacatgtttataaactatattcagcttatttccataagctctccaagatagcttatgaaaacaattt 2205657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 2455926 - 2455819
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||| |||| ||| | | |||| |||| |||||||||||||||||  | ||||||||| |||| || ||||| ||||| |||||| |||||||    
T  2455926 ataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagct 2455827  T
Q  302 tatgaaaa 309  Q
    ||||||||    
T  2455826 tatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 2117489 - 2117384
Alignment:
Q  232 ttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||||| ||||| ||| ||||||| || | || |||| ||||| ||||| |||| | |||| ||||||||||||| |||||| |||||||||||    
T  2117489 ttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaa 2117390  T
Q  332 tagttt 337  Q
    ||||||    
T  2117389 tagttt 2117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 24838771 - 24838828
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||    
T  24838771 atttctataagctctccatgatagcttatgaaatcagcttatagcttatatgaaaata 24838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 28088245 - 28088305
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||| || || |||||||||||||||||||||||| |||||||||||||||||||    
T  28088245 agcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 32171583 - 32171455
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||| |||||||||||  |||||||| |||  |||||||||||||| |  || || |||| | ||||||| ||||| ||||| |||||| |||| ||    
T  32171583 ataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccataagctctccaggatacct 32171484  T
Q  302 tatgaaaacaatttatagcttatatgaaa 330  Q
    ||  ||||||  |||||||||||||||||    
T  32171483 tactaaaacagattatagcttatatgaaa 32171455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 7785724 - 7785831
Alignment:
Q  228 gagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatg 327  Q
    |||||||  |||||| |||||||||| |||||||  | | ||||||| ||||| ||||| ||||||  |||||  ||||| |||||||||||||||||||    
T  7785724 gagtttacagaaacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc--atgaagacaatttatagcttatatg 7785821  T
Q  328 aaaatagttt 337  Q
    |||| |||||    
T  7785822 aaaagagttt 7785831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 2460105 - 2460206
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||||||||||| || ||||| |||| ||||||||||||||||| ||| |||  | | |||| || ||||| ||||| ||||||| ||||||    
T  2460105 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagct 2460204  T
Q  302 ta 303  Q
    ||    
T  2460205 ta 2460206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 32917314 - 32917262
Alignment:
Q  201 aataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    ||||| ||||||||||||||| |||||||| |||| |||||||||||||||||    
T  32917314 aataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacat 32917262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 337
Target Start/End: Complemental strand, 283175 - 283076
Alignment:
Q  238 aaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| |||||||||| || ||||||||| ||||||| ||||||||||| |  | | |||||| |||| |||||  |||||||||||| ||||| |||||    
T  283175 aaacagcttatgacatgtccataaactattttcagcttatttctataagcttccgaagatagcctatgcaaacagattatagcttatacgaaaacagttt 283076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 2027384 - 2027495
Alignment:
Q  226 gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||||||  ||||| |||||||||| || |||| || | ||||||| |||| | |||  ||| |||| |||||||||| ||||  |||||| |||||    
T  2027384 gagagtttatgaaaacagcttatgacatttccataagctgttttcagcttatttatttaaactctacatgctagcttatgagaacagcttataggttata 2027483  T
Q  326 tgaaaatagttt 337  Q
    ||||||||||||    
T  2027484 tgaaaatagttt 2027495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 27595521 - 27595572
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||||||||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacat 27595572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 4246491 - 4246397
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||| ||||||| || |||| || | |||| || |||| |||| | ||||||| ||||||||||||||||  |||||| |||||||||||    
T  4246491 gaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaa 4246397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 8364938 - 8365059
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| ||| |||  |||| |||| |||| ||||||| | || || || | ||||||| ||||  || || || |||||||||||||||||||    
T  8364938 ttgtgagactgtatggaagaacttatggaaataactgatgacatgtttacaagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaa 8365037  T
Q  310 caatttatagcttatatgaaaa 331  Q
    || |||||| ||||||| ||||    
T  8365038 cagtttataacttatataaaaa 8365059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 329
Target Start/End: Complemental strand, 30523745 - 30523649
Alignment:
Q  232 ttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaa 329  Q
    |||| ||||||||||||| ||| |  |||| || | |||| |||||||||||||  |||| | ||||||||||||||| || ||||||||||||||||    
T  30523745 ttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatatgaa 30523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 1401158 - 1401102
Alignment:
Q  269 tcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    |||||| || || ||||| ||||||||||||||||||||||||  ||||||||||||    
T  1401158 tcagcttatctccataagctctccatgatagcttatgaaaacagcttatagcttata 1401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 3168281 - 3168341
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    ||||||| |||||  |||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  3168281 ttcagcttatttccttaagctctccaggatagcttaagaaaacagtttatagcttatatga 3168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 5623183 - 5623143
Alignment:
Q  291 ccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  5623183 ccatgatagcttatgaaaacaacttatagtttatatgaaaa 5623143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 1275199 - 1275136
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||| ||||| |||||| |||| | ||||||||||  ||||||||||||||||||    
T  1275199 ttcagcttatttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaa 1275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 2034424 - 2034507
Alignment:
Q  226 gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||| |||||| |||||||||| || |||| || | ||||||| |||||  |||| ||| |||| |||||||||||||    
T  2034424 gagagtttatggaaacagcttatgacatttccataagctgttttcagcttatttcattaagctctacatgttagcttatgaaaa 2034507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 7485118 - 7485161
Alignment:
Q  298 agcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||||||||||| |||||||||||||||||| | |||||||    
T  7485118 agcttatgaaaacaacttatagcttatatgaaaaaaatttaact 7485161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 33067274 - 33067155
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||| ||||||  |||||||| |||| | ||||  ||| || || || |||||   | ||||| | ||||||| ||| |||||| |||||||    
T  33067274 ataagcacttgtaagactgattgggagagcttatggcaacagtttaggaaatgtccataaatcgttttcagtttatttctacaagctctccaagatagct 33067175  T
Q  302 tatgaaaacaatttatagct 321  Q
    ||||||||||| ||||||||    
T  33067174 tatgaaaacaacttatagct 33067155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 2027764 - 2027814
Alignment:
Q  214 gagactgtgtgggagagtttatcgaaacaacttatgacatatctataaact 264  Q
    |||||||| |||||||| |||| ||||||||||||||||| || |||||||    
T  2027764 gagactgtttgggagagcttatagaaacaacttatgacatgtcaataaact 2027814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 7148782 - 7148648
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||| |||   | |||| |||  ||||||||||||||| | || |||| |||| |||| || ||||  ||||| |||||| | |||||    
T  7148782 ataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctccagggtagct 7148683  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||| |||| |  |||||||||||||| ||| ||||    
T  7148682 tattaaaataccttatagcttatatgtaaagagtt 7148648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 8010450 - 8010364
Alignment:
Q  225 ggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||||| |||| ||||||||| ||||||| |  |||| |||| ||||| | ||||||||||| |||||| |||| ||||| ||||||    
T  8010450 ggagagcttatagaaacaactcatgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaaca 8010364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 9667974 - 9668068
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||| || |||| || | |||| || ||||| ||||| |||||   | || |||||||||||| || |||||||||||||||    
T  9667974 gaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatgaaaa 9668068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 28660807 - 28660853
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| ||||||||||||||||||  ||||||||||||| |||||||    
T  28660807 gatagtttatgaaaacaatttataatttatatgaaaataatttaact 28660853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 31324492 - 31324434
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaac 340  Q
    ||||| ||| ||||||||||||||||  ||  |||||||||| ||||||||||||||||    
T  31324492 ataagctcttcatgatagcttatgaatgcagcttatagcttacatgaaaatagtttaac 31324434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 337
Target Start/End: Complemental strand, 3155253 - 3155157
Alignment:
Q  240 acaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||| ||||||| || | ||||||| ||||| || || |||||| |||| |||||||||| |  |||||| ||||||| ||| |||||    
T  3155253 acaacttatgacatgtctataagctgttttcagcttatttccat-agctctccaggatatcttatgaaaatagcttataggttatatggaaacagttt 3155157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 3204593 - 3204630
Alignment:
Q  299 gcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  3204593 gcttatgaaaacaatttctagcttatatgaaaacagtt 3204630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 7149504 - 7149553
Alignment:
Q  279 tctataagatctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    |||||||| |||||| ||||| ||||||||| | ||||||||||||||||    
T  7149504 tctataagctctccaggatagtttatgaaaatagtttatagcttatatga 7149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 7901785 - 7901861
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaattt 279  Q
    |||||| ||||||||||||| ||| |||| |||| ||||||||||| || || |||||||||| | ||||||| ||||    
T  7901785 ataagcccttgtgagactgtttggaagagcttat-gaaacaacttaagatatgtctataaactgttttcagctcattt 7901861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 8420151 - 8420252
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| |||||||||||||||  | ||||| |||| |||| | |||||||||| || | || |||| |||| || ||||| ||||| ||||||| ||||||    
T  8420151 ataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctccattatagct 8420250  T
Q  302 ta 303  Q
    ||    
T  8420251 ta 8420252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 10616496 - 10616624
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||| |||||| ||| | |||||||| |||| ||||||||||||||||| ||  |||  | | ||||||| |||| |||||| ||||||  ||||||    
T  10616496 ataagcatttgtga-actatttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagct 10616594  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||| |||||   |||||  |||||||||||    
T  10616595 tattaaaacggcttatattttatatgaaaa 10616624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 31686321 - 31686426
Alignment:
Q  206 gcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatg 305  Q
    |||||||||| | ||| || ||||  ||||| |||||||||||||||  | ||||| || | ||||||| || ||  |||| |||||| |||||||||||    
T  31686321 gcacttgtgacattgtttgagagaacttatcaaaacaacttatgacaagtttataatctgttttcagcttatgtccgtaagctctccaggatagcttatg 31686420  T
Q  306 aaaaca 311  Q
    ||||||    
T  31686421 aaaaca 31686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 32171337 - 32171446
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||| |||||||| || ||||| ||||  ||||| |||||||||  || | || |||| ||||||| ||||| ||||| | |||| |||| ||    
T  32171337 ataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggataact 32171436  T
Q  302 tatgaaaaca 311  Q
     |||||||||    
T  32171437 aatgaaaaca 32171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 34939852 - 34939755
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||| ||||| | |||||| |||  |||||| |||||||||| || ||||| | | ||||||| ||||| ||||  |||||| |||||||||||||    
T  34939852 ttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 4006737 - 4006701
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  4006737 gatagcttatgaaaacaacttatagcttatataaaaa 4006701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 10452413 - 10452449
Alignment:
Q  301 ttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  10452413 ttatggaaacaacttatagcttatatgaaaatagttt 10452449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 25100098 - 25100030
Alignment:
Q  263 ctatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| |||| || ||||||||||| |||  | |||||||||||||||||| ||||| ||| ||||||||    
T  25100098 ctattttcaacttatttctataagctctttaagatagcttatgaaaacaacttataacttctatgaaaa 25100030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 33217479 - 33217515
Alignment:
Q  305 gaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||||||||||||||| |||||| |||||||    
T  33217479 gaaaacaatttatagcttatataaaaatattttaact 33217515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 33385645 - 33385585
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaa 262  Q
    |||||||||||||| ||||| ||| ||||||||| |||||| || ||||||| || |||||    
T  33385645 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 33385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 32172769 - 32172644
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||||||||  || |||||||| |||| ||||||||||||||||| || |||| | || ||||||| ||||| || || ||| ||||||||||    
T  32172769 ataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagct 32172670  T
Q  302 tatgaaaacaatttatagcttatatg 327  Q
    ||||||||||  ||||||||||||||    
T  32172669 tatgaaaacagcttatagcttatatg 32172644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 326
Target Start/End: Original strand, 25079522 - 25079639
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||| | |||   |||| |||||  |||| |||| |||||||||    
T  25079522 ataagcacttgtgagactatttgg-agagtttatcgaaacaacttatgacatgtctataatc-ata---agct-atttccttaagctctcgatgatagct 25079615  T
Q  302 tatgaaaacaatttatagcttatat 326  Q
    | ||||||||| |||||||||||||    
T  25079616 t-tgaaaacaacttatagcttatat 25079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 326
Target Start/End: Original strand, 25137491 - 25137608
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||| | |||   |||| |||||  |||| |||| |||||||||    
T  25137491 ataagcacttgtgagactatttgg-agagtttatcgaaacaacttatgacatgtctataatc-ata---agct-atttccttaagctctcgatgatagct 25137584  T
Q  302 tatgaaaacaatttatagcttatat 326  Q
    | ||||||||| |||||||||||||    
T  25137585 t-tgaaaacaacttatagcttatat 25137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 7319456 - 7319383
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||| |||| |||||| |||||| ||||||||| ||||||| ||||||||||||||||||| | |||||||    
T  7319456 ttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaact 7319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 10272385 - 10272514
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| |||||||| |||| | |||||| | |||| ||||||||||||||||| ||| |||  | | ||||||| ||||  ||||  |||||| ||| |||    
T  10272385 ataatcacttgtgtgactatttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggct 10272484  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||| |||||||||||| |||||    
T  10272485 tatgaaaacaacttatagcttatacgaaaa 10272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 18704025 - 18704122
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatag 334  Q
    |||||||||||| |||| |||||||  | | ||||||| ||||| |||||||||   | ||||||||||||||||| ||||||||||||| |||||||    
T  18704025 gaaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatag 18704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 2568773 - 2568645
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    |||||||||| |||||||| | | |||  ||||  ||||| ||||||||||||  ||||  ||| || |||| ||||  || || |||||||||||||||    
T  2568773 taagcacttgagagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagctt 2568674  T
Q  303 atgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||| |||||||||||| |||||    
T  2568673 atgaaaacaacttatagcttatacgaaaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 337
Target Start/End: Complemental strand, 14295611 - 14295487
Alignment:
Q  213 tgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaa 312  Q
    ||||||||| || ||||| ||||  ||||| ||||||| || || |||| || | ||||||| | ||||| ||| |||||| ||||||||| |||||||     
T  14295611 tgagactgtctgagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacag 14295512  T
Q  313 tttatagcttatatgaaaatagttt 337  Q
     |||||||||||||||||| |||||    
T  14295511 cttatagcttatatgaaaacagttt 14295487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 29336744 - 29336613
Alignment:
Q  204 aagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctta 303  Q
    |||||||||||||||||  || ||||| |||| ||||||||||||| |||| | ||||| | | ||||||| || |  | ||| | ||||||||||||||    
T  29336744 aagcacttgtgagactgattgagagagcttatggaaacaacttatggcatacccataaaatgttttcagcttatatacaaaagctatccatgatagctta 29336645  T
Q  304 tgaaaacaatttatagcttatatgaaaatagtt 336  Q
    |||||||| | | |||||||| |||||||||||    
T  29336644 tgaaaacagtgtgtagcttat-tgaaaatagtt 29336613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 39257348 - 39257470
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||||||||||||||| || || |||  ||||||||| ||||||| || ||||||       || | || || ||||| |||||||||| |||    
T  39257348 ataagcacttgtgagactgtgtgcgaaagcttagagaaacaactaatgacatgtccataaac-------agtttatatcaataagctctccatgattgct 39257440  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||| |||||| |||||||||||    
T  39257441 tatgaaaacaacttatagtttatatgaaaa 39257470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 37690598 - 37690720
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt-atgaaa 308  Q
    |||||||||||| || ||||| ||||  | ||||| |||||||| |  |||| || | ||||||| ||||| ||||| ||||||| ||| ||| ||||||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaa 37690697  T
Q  309 acaatttatagcttatatgaaaa 331  Q
    |||| ||||||||||||||||||    
T  37690698 acaacttatagcttatatgaaaa 37690720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 37526161 - 37526282
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| || ||||| ||||  | ||||| |||||||| |  |||| || | ||||||| ||||| ||||| ||||||  | | ||||||||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  310 caatttatagcttatatgaaaa 331  Q
    ||| ||||||||||||||||||    
T  37526261 caacttatagcttatatgaaaa 37526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 37588322 - 37588443
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| || ||||| ||||  | ||||| ||||| || |  |||| || | ||||||| ||||| ||||| ||||||  ||| ||||||||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  310 caatttatagcttatatgaaaa 331  Q
    ||| ||||||||||||||||||    
T  37588422 caacttatagcttatatgaaaa 37588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 4619823 - 4619699
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||  | ||||| |||||||| ||||  |||||||| ||||||| |  |||| ||   |||| || ||||| ||||| ||||||||||||||    
T  4619823 ataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagct 4619724  T
Q  302 tatgaaaacaatttatagcttatat 326  Q
    |||||| ||| ||||||| ||||||    
T  4619723 tatgaagacagtttatagattatat 4619699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 7319381 - 7319325
Alignment:
Q  281 tataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| |||||| ||||||||| ||||||| ||||||||||||||||||| |||||    
T  7319381 tataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacagttt 7319325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 11457209 - 11457102
Alignment:
Q  207 cacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    ||||||||||||||| | | |||| |||| ||||||||||||||||| || |||| || | ||||  | ||||||||||| |||||| |||| ||| |||    
T  11457209 cacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagctgt-ttcatattatttctataagctctccaagataacttttga 11457111  T
Q  307 aaacaattt 315  Q
    |||||||||    
T  11457110 aaacaattt 11457102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 29588962 - 29588866
Alignment:
Q  235 tcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||| || ||||| |||  |||| ||||||| ||||| ||||  ||| ||  |||||||| ||||||| |||||||||||||||||||    
T  29588962 tcgaaacaacttaagatatatccataggctattttcagcttatttccataaactcttcaacatagcttacgaaaacactttatagcttatatgaaaa 29588866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 28586720 - 28586855
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||| |||||| ||||| |||||||| |||| |||| | |||||||||||||  ||| || | ||||||| ||||| ||||| |||| | |||||||    
T  28586720 ataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagct 28586819  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
      | ||||||  |||||  ||||||||||| |||||    
T  28586820 cgtcaaaacagcttataatttatatgaaaacagttt 28586855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 34975436 - 34975357
Alignment:
Q  246 tatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||||||| |||||   | ||||||| ||||| || || |||||| ||||||||| |||||||||||||||||||||    
T  34975436 tatgacatatccataaatcgttttcagcttatttccattagctctccaggatagcttacgaaaacaatttatagcttata 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 37611175 - 37611282
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||||||| ||| || ||||| ||||  ||||||||| |||||| |  |||| || | ||||| | ||||| ||||| |||||| |||||||||||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37611274  T
Q  308 aacaattt 315  Q
    ||||||||    
T  37611275 aacaattt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 37787905 - 37788012
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||||||| ||| || ||||| ||||  ||||||||| |||||| |  |||| || | ||||| | ||||| ||||| |||||| |||||||||||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37788004  T
Q  308 aacaattt 315  Q
    ||||||||    
T  37788005 aacaattt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 40205055 - 40205138
Alignment:
Q  229 agtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaa 312  Q
    |||||||  ||||| ||||| |||| || |||| || | ||||||| ||||||||||| |||||| ||||||||||||||||||    
T  40205055 agtttatataaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaa 40205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 41016294 - 41016160
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||||  |||||| |  |||||||||| ||||||||||||| ||| | | | |  | | ||||||| ||||  ||||| | |||||||| |||    
T  41016294 ataagcacttgtaggactgtataagagagtttatggaaacaacttatggcatgtttgtgagttgt-ttcagcttattttcataagctttccatgatggct 41016196  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    | ||||||||| |||||||||||||||||| |||||    
T  41016195 tgtgaaaacaacttatagcttatatgaaaacagttt 41016160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 7674756 - 7674635
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||  ||| |||  |||| ||||||||||||||||| | |||||  | | ||||||| ||||  | ||  |||||| |||||||||||||||    
T  7674756 ttgtgagactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaa 7674657  T
Q  310 caatttatagcttatatgaaaa 331  Q
    || ||||| ||||||| |||||    
T  7674656 cattttatggcttataagaaaa 7674635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 15309027 - 15309076
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||| ||||||||| |||||||||| |||||||||||| |||||    
T  15309027 ataagatctcaatgatagctaatgaaaacaacttatagcttataagaaaa 15309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 32408620 - 32408677
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||| ||||| ||| || ||||||||||||||| | |||||||||||||||||||||    
T  32408620 atttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaata 32408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 34245754 - 34245706
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| ||||    
T  34245754 tctccatgatagcttataaaaacaacttatagcttatattaaaacagtt 34245706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 11700332 - 11700383
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||||||||||||||||| |   ||||||||||| |||||||||||||||||    
T  11700332 ataagcacttgtgagactattgaggagagtttatggaaacaacttatgacat 11700383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 18543217 - 18543279
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| ||||| ||||||| ||||    
T  18543217 ttcagcttatttc-ataagctctccaggatagcttatgaaaacaacttatatcttatataaaaa 18543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 34117570 - 34117621
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||| |||||| |||||||||||||| ||| |||||||||||||| |||||    
T  34117570 ataagctctccaagatagcttatgaaagcaacttatagcttatatgtaaata 34117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 35553208 - 35553271
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||| ||||| ||||||  ||||| |||||||| | |||||||||||||||||||    
T  35553208 ttcagcttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaa 35553271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 38047833 - 38047884
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    ||||| ||||||| |||||| |||||||| |||| |||||||||||||||||    
T  38047833 ataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacat 38047884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 39105500 - 39105441
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| |||||| |||||||||||||||||  |||||||||||| ||||| | |||||||    
T  39105500 ataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaact 39105441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 19138737 - 19138802
Alignment:
Q  268 ttcagctaatttctataagatctccatg--atagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||| ||||| |||||||   ||||||||||||||||| ||||||||||| ||||||    
T  19138737 ttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaaa 19138802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 25720371 - 25720509
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| || ||||| ||||  |||||| | ||||||| |  |||||||   || |||| ||||| |||||   |||| |||||||    
T  25720371 ataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcataaacttcttttagcttatttccataagtgttccaagatagct 25720470  T
Q  302 tatgaaaaca-atttatagcttatatgaaaatagtttaa 339  Q
     |||||||||  |||||| ||| |||||||| |||||||    
T  25720471 catgaaaacagctttataacttttatgaaaacagtttaa 25720509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 26390749 - 26390883
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacata-tctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    |||| ||| ||||| || ||||| | || ||||||||||||  |||| || |||| || | |||| || ||||| ||||| |||||| |||| |||| ||    
T  26390749 acttatgaaactgtttgagagagctgatagaaacaacttatctcatagtccataagctgttttcaccttatttccataagctctccaggataacttagga 26390848  T
Q  307 aaacaatttatagcttatatgaaaatagtttaact 341  Q
    || ||  |||||||||||||||||| |||||||||    
T  26390849 aaccatcttatagcttatatgaaaacagtttaact 26390883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 26516423 - 26516381
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||    
T  26516423 gatagcttatgaaaacagtttataacttatatgaaagtagttt 26516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 29054950 - 29054896
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaa 330  Q
    ||||| ||||| ||| |||||||| ||||| |||||| |||||||||||||||||    
T  29054950 atttccataagctctacatgatagtttatggaaacaacttatagcttatatgaaa 29054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 34205262 - 34205224
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  34205262 gatagcttatgaaaacaacttatagcttatataaaaata 34205224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 8158353 - 8158394
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||| |||||| |||||||||||||||| |||||||    
T  8158353 cttatgaaaataatttaaagcttatatgaaaataatttaact 8158394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 12975383 - 12975334
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| |||||| ||||||||||||| |||  ||||||||||||||||||    
T  12975383 ataagctctccaagatagcttatgaacacagcttatagcttatatgaaaa 12975334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 41052963 - 41052870
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaattta 316  Q
    |||||||| |||| |||||||| |||||||| |  ||||||||| || | || ||||| ||||| ||||||  |||| ||||||||||| ||||    
T  41052963 tgggagagcttatagaaacaacctatgacatgttcataaactatttttaacttatttccataagctctccaaaataggttatgaaaacagttta 41052870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 15246856 - 15246812
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaa 339  Q
    |||||||||||||||||  | |||||||||| |||||||||||||    
T  15246856 gatagcttatgaaaacagctcatagcttatacgaaaatagtttaa 15246812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 15557295 - 15557335
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  15557295 atagcttatgaaaacaactaatagcttataagaaaatagtt 15557335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 29201580 - 29201528
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagctta 323  Q
    |||||||||| ||||| |||||| ||||| |||||||||||  ||||||||||    
T  29201580 agctaatttccataagctctccaggataggttatgaaaacagcttatagctta 29201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 31030150 - 31030210
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    ||||||| ||||| ||||| |||||| || |||||| |||||| | |||||||||||||||    
T  31030150 ttcagcttatttccataagctctccaggacagcttaggaaaactacttatagcttatatga 31030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 32703272 - 32703348
Alignment:
Q  244 cttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagc 320  Q
    |||||||||  | |||||||| | ||||||| |||| |||||  |||||  |||||||||||||||||| |||||||    
T  32703272 cttatgacacgtttataaactgttttcagcttatttttataaattctcctagatagcttatgaaaacaacttatagc 32703348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 41017764 - 41017708
Alignment:
Q  281 tataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| | ||||||||  ||||||||||||| |||||||||||| |||||| ||||    
T  41017764 tataagctttccatgatgacttatgaaaacaacttatagcttataggaaaatggttt 41017708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 48157075 - 48157203
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    |||||| |||||||||||| |||||||| |||| ||||||||||||| ||| || |||| || | ||||||| ||||| |||||||||||   |||||||    
T  48157075 taagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagctt 48157174  T
Q  303 atgaaaacaatttatagcttatatgaaaa 331  Q
     ||||||||| ||||||||||||| ||||    
T  48157175 gtgaaaacaaattatagcttatattaaaa 48157203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 33645920 - 33646049
Alignment:
Q  208 acttgtgagactgtgtgg-gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    |||||||||||||  ||| ||||| |||| ||||||||||||||||| |||||||  | | || || | ||||| ||||| |||||| ||||||||||||    
T  33645920 acttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatga 33646018  T
Q  307 aaacaatttatagctt-atatgaaaatagtt 336  Q
    ||||| |||||||||| ||||||||||||||    
T  33646019 aaacagtttatagcttaatatgaaaatagtt 33646049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 27481250 - 27481383
Alignment:
Q  204 aagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctta 303  Q
    |||||||||||||| ||| || ||||| |||| | || |||||| || || |||||||||| | ||  | | ||||| ||||| | ||||||||||||||    
T  27481250 aagcacttgtgagattgtttgtgagagcttatagcaataacttacgatatgtctataaactgttttgggtttatttccataagctatccatgatagctta 27481349  T
Q  304 tgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| || |||||||||||||| ||| |||||    
T  27481350 tgaaaataacttatagcttatatggaaacagttt 27481383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 11464039 - 11464083
Alignment:
Q  289 ctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||||||||||||| || ||||||||||||||||||||||||||    
T  11464039 ctccatgatagcttacgagaacaatttatagcttatatgaaaata 11464083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 328
Target Start/End: Complemental strand, 21453415 - 21453284
Alignment:
Q  196 aatgaaataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatg 295  Q
    ||||| |||||||||| | ||||||| ||| |||| |||| |||  | |||||||||| || |||||| || ||||||| || |  || || |||| | |    
T  21453415 aatgacataagcactt-taagactgtttggaagagcttatagaataatcttatgacatctccataaaccattttcagcttatcttcattagctctctagg 21453317  T
Q  296 atagcttatgaaaacaatttatagcttatatga 328  Q
    |||||||||||||||| ||||||||||||||||    
T  21453316 atagcttatgaaaacagtttatagcttatatga 21453284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 25507367 - 25507328
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaatagtttaa 339  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  25507367 cttatgaaaacaacttatagcttatatgaaaatagtttaa 25507328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 39360129 - 39360030
Alignment:
Q  212 gtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||||||||| ||  ||||||||| |||||||||||||||||||| ||||  |   ||||||| ||||| ||||| || ||| |||||||| ||||||||    
T  39360129 gtgagactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttttgaaaaca 39360030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 23214971 - 23214877
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatga 296  Q
    |||| ||||| ||||||||| || |||| |||||  |||||||||||||||| || |||| || ||||||||| || |  |||||||||||||||    
T  23214971 ataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataagctctattcagcttatgttcataagatctccatga 23214877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 25558238 - 25558280
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  25558238 gataacttatgaaaacaacttatagcttatatgaaaatagttt 25558280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 25558436 - 25558478
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  25558436 gataacttatgaaaacaacttatagcttatatgaaaatagttt 25558478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 28635070 - 28635032
Alignment:
Q  298 agcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  28635070 agcttatgaaaacaatttatagcttctatgaaaatagtt 28635032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 5006549 - 5006598
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| | |||||||||||||||||||||| |||||||||||| |||||    
T  5006549 tctccagggtagcttatgaaaacaatttataccttatatgaaaacagttt 5006598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 25670540 - 25670669
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||| ||||||||||||| || || |  ||||  |||||||||||||||| |  ||||| | | ||||||| ||||  | ||| |||||| ||||  |    
T  25670540 ataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgt 25670639  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||| ||||||||| ||||||||||||||||    
T  25670640 tataaaaacaattgatagcttatatgaaaa 25670669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 39711450 - 39711495
Alignment:
Q  292 catgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||| |||||||||||||||||||||||||||| || |||||    
T  39711450 catgatagtttatgaaaacaatttatagcttatatgacaacagttt 39711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 30812195 - 30812135
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||| ||||| |||||||||||||| |||||||||  |||||||||||| |||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaa 30812135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 44241909 - 44241841
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||| ||||||||||| | | || |||||||||||||||||| |||||| |||||  |||||||||    
T  44241909 ttcagcttatttctataagctattcaagatagcttatgaaaacaacttataggttatacaaaaatagtt 44241841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 1417294 - 1417251
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||| |||||||||||||||| |||| |||||||||||||    
T  1417294 tctccatgctagcttatgaaaacaacttattgcttatatgaaaa 1417251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 4966266 - 4966143
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||||||||||| | |||||| |||| ||||| |||||||| || || ||||  | | ||||| | ||||| ||||| ||| || ||| |||||||||    
T  4966266 acttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaa 4966167  T
Q  308 aacaatttatagcttatatgaaaa 331  Q
    ||||  ||||| || |||||||||    
T  4966166 aacagcttatacctaatatgaaaa 4966143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 22296270 - 22296321
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||| ||||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  22296270 tccaagatagtttatgaaaacaatttataggttataggaaaataatttaact 22296321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 28165133 - 28165078
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| ||||| ||||||||||||||||| || ||| |||||||||||||| ||||    
T  28165133 atttccataagctctccatgatagcttataaagacagtttatagcttatattaaaa 28165078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 341
Target Start/End: Complemental strand, 40428671 - 40428532
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||||| | ||||| || ||||  | || ||||||||||   | ||||||| | ||||||| ||||| ||||| |||  | |||||||    
T  40428671 ataaccacttgtgagactatctgggaaagcttatacatacgacttatgacacgccgataaactgttttcagcttatttccataagctctttaggatagct 40428572  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||    || ||||||||||||||||||||| |||||||    
T  40428571 tatgccttcagtttatagcttatatgaaaataatttaact 40428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 40689028 - 40689079
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||| ||||||||||||| |||  |||||||||||||||||||| |||||||    
T  40689028 tccaggatagcttatgaacacagcttatagcttatatgaaaataatttaact 40689079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 46281119 - 46281218
Alignment:
Q  227 agagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatat 326  Q
    ||||||||  ||||||||||||| ||| |||||||| | | ||||||| |||| ||||||  |||||  ||||||||| ||||||  ||||||| |||||    
T  46281119 agagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatataagccctccagaatagcttataaaaacagcttatagcctatat 46281218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 47427254 - 47427321
Alignment:
Q  199 gaaataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactat 266  Q
    |||||||||| ||||||||  || || ||||| |||| ||||||||||||||||| ||||||| ||||    
T  47427254 gaaataagcaattgtgagatggtttgagagagcttatggaaacaacttatgacatctctataagctat 47427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 3610699 - 3610817
Alignment:
Q  207 cacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    ||||||||| ||| | ||||| |  |||| |||||| || ||||||| || |||| |  | ||||||| ||||||||||| |||| | ||||| ||| ||    
T  3610699 cacttgtgatactttttgggaaaccttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacga 3610798  T
Q  307 aaacaatttatagcttata 325  Q
    |||||| ||||||||||||    
T  3610799 aaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 12234846 - 12234932
Alignment:
Q  205 agcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctc 291  Q
    ||||| ||||||||||  ||| | || |||| ||||||||||||||||| ||||||| || | ||||||| ||||| ||||| ||||    
T  12234846 agcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttttcagcttatttccataagctctc 12234932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 24363621 - 24363687
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatag 334  Q
    ||||||| ||||| ||||  |||||| |||||||||||||||||| ||||| | | |||||||||||    
T  24363621 ttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatag 24363687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 28691869 - 28691911
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttat 324  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  28691869 ataagatctccaggatagcttatgaaaacaatgtataacttat 28691911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 36537943 - 36537905
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  36537943 gatagcttatgaaaacacttcatagcttatatgaaaata 36537905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 42281491 - 42281577
Alignment:
Q  225 ggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||||| |||| |||||| |||||||||| |  ||||  | | ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  42281491 ggagagcttatagaaacagcttatgacatgtaaataatttgttttcagcttatttctataagctctcagtgatagcttatgaaaaca 42281577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 18350741 - 18350790
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| |||||    
T  18350741 ataagctctccatgatagcttatgaaaacagcttataacttatacgaaaa 18350790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 24895398 - 24895341
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||| ||||| ||||||  ||| ||| ||||||||| ||||||||||||||||||||    
T  24895398 atttccataagctctccacaatatcttgtgaaaacaacttatagcttatatgaaaata 24895341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 24909682 - 24909649
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||||||||||| ||||||||||||||||||||    
T  24909682 cttatgaaaacaacttatagcttatatgaaaata 24909649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 25422380 - 25422327
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||| | |||||||    
T  25422380 tctccatgatagcctgtgaaaacaatttatagctaatatggaaagaatttaact 25422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 33709466 - 33709429
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  33709466 cttatgaaaacagtttatagcttatatgaagatagttt 33709429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 36370711 - 36370646
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| ||||| ||| || ||||| ||||| |||||| ||||||||||| |||||| |||||||||    
T  36370711 atttccataagctcttcaggatagtttatggaaacaacttatagcttatgtgaaaacagtttaact 36370646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 44151500 - 44151569
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||| ||||| ||||| | | || ||||| |||||||||||| |||||||||||||| ||| |||||    
T  44151500 ttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttt 44151569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 47177666 - 47177613
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||| |||||||| ||||||||  |||||||||||||||||| | |||||||    
T  47177666 tctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaact 47177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 22387850 - 22387942
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccat 294  Q
    |||| ||| ||||||||||| |||||||| ||||  |||||||||||| ||| | |||||||| | || | || ||||| ||||| |||||||    
T  22387850 ataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctctccat 22387942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 31341251 - 31341199
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacata 254  Q
    |||| ||||| | ||||||| ||||||||||||| ||||||||| ||||||||    
T  31341251 ataaacacttttaagactgtttgggagagtttatggaaacaactaatgacata 31341199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 38010761 - 38010701
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||| ||||| |||| | ||||| |||||||||||  ||||||||||||||||||    
T  38010761 agcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaa 38010701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 46056057 - 46056085
Alignment:
Q  295 gatagcttatgaaaacaatttatagctta 323  Q
    |||||||||||||||||||||||||||||    
T  46056057 gatagcttatgaaaacaatttatagctta 46056085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 46104336 - 46104392
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttta 338  Q
    ||||| ||| || |||| |||||||||||| ||||||||||||| ||||| ||||||    
T  46104336 ataagttcttcaagataacttatgaaaacagtttatagcttatacgaaaacagttta 46104392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 46104528 - 46104644
Alignment:
Q  209 cttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaa 308  Q
    ||||||| | ||| ||||| || ||||  |||||||| ||||||| || ||||| | | | ||||| ||||  ||||| ||| ||  |||||||||||||    
T  46104528 cttgtgatattgtttgggaaagattatgaaaacaactcatgacatgtcaataaaatgtttccagcttattttcataagctcttcagcatagcttatgaaa 46104627  T
Q  309 acaatttatagcttata 325  Q
    |||| ||||||||||||    
T  46104628 acaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 338
Target Start/End: Original strand, 14316106 - 14316235
Alignment:
Q  209 cttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaa 308  Q
    ||||||||||| | | |||||| |||| ||||||||||||||||||| ||||| || | ||||||| |||||||||   |||| | ||| || |||||||    
T  14316106 cttgtgagactattttggagagcttatggaaacaacttatgacatatgtataagctgttttcagcttatttctatagcttctcaaagattgcatatgaaa 14316205  T
Q  309 acaatttatagcttatatgaaaatagttta 338  Q
    | ||||||||||||||| ||||||||||||    
T  14316206 ataatttatagcttataagaaaatagttta 14316235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 11514012 - 11513885
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| |  ||||| ||||  ||||| |  ||| |||  |||||| |||| ||||||| ||||| | ||| ||||||||||||||    
T  11514012 ataagcacttgtgagactgttttagagagcttatgaaaacagc--atggcatgcctataagctattttcagcttatttccaaaagttctccatgatagct 11513915  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||| ||||||||||||||||||    
T  11513914 tatgaaaacaacttatagcttatatgaaaa 11513885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 14299586 - 14299714
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    |||||||||| | |||||| ||| ||||||||| |||||||||||||||||||| ||| | | | ||||||| ||||||||||| | || | |||||| |    
T  14299586 taagcacttgagggactgtttggaagagtttatggaaacaacttatgacatatccatacattgttttcagcttatttctataagctgtcaaagatagcct 14299685  T
Q  303 atgaaaacaatttatagcttatatgaaaa 331  Q
     ||||||||| | ||| ||||||||||||    
T  14299686 gtgaaaacaactcataacttatatgaaaa 14299714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 32821912 - 32821806
Alignment:
Q  215 agactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatt 314  Q
    ||||||| ||| ||||||||| ||||||||||||||||| || |||| || | ||||| | ||||||||||| |||  | ||||||||||||||||| ||    
T  32821912 agactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtt 32821813  T
Q  315 tatagct 321  Q
    |||||||    
T  32821812 tatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 36863621 - 36863714
Alignment:
Q  244 cttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||| |||||||||||||||||| | || || ||||  ||||| |||||| |||||||||||||||||||||||| ||||||| ||||| ||||    
T  36863621 cttacgacatatctataaactatttccaacttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgttt 36863714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 36852548 - 36852472
Alignment:
Q  242 aacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttata 318  Q
    |||||||||||| |||||||||||| ||||| | ||||| ||||| |||||| ||||||||||||||||| ||||||    
T  36852548 aacttatgacatgtctataaactattttcagattatttccataagctctccaagatagcttatgaaaacagtttata 36852472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 17221497 - 17221620
Alignment:
Q  205 agcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttat 304  Q
    ||||||| |||||||||  || |||| |||| |||| | ||||||||||||| ||||||| | || |||| |||||  |||||||||   ||||||||||    
T  17221497 agcacttctgagactgttcggaagagcttatggaaatatcttatgacatatccataaactttttttagcttatttccgtaagatctctcggatagcttat 17221596  T
Q  305 gaaaacaatttatagcttatatga 328  Q
    ||||||| || |||||||||||||    
T  17221597 gaaaacacttaatagcttatatga 17221620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 18962078 - 18962131
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  18962078 tctccatgatagcttatgaaaatagtttatagcttatatgaaaacagtttaact 18962131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 332
Target Start/End: Complemental strand, 39983413 - 39983328
Alignment:
Q  247 atgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaat 332  Q
    ||||||| ||||||| |||| ||||| | ||||  || || |||||| |||||||||||||||||| |||||||||||||||||||    
T  39983413 atgacatgtctataagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaat 39983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 8017470 - 8017411
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| |||||| ||||||||||||||||| |||| |||||||||||||||| |||||||    
T  8017470 ataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaact 8017411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 30552597 - 30552732
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaacta-tattcagctaatttctataagatctccatgatagc 300  Q
    |||||||||| ||| ||||| || || || |||||||||||||||||||||| || ||||  |  | || |||| ||||| ||||| |||| | |||||     
T  30552597 ataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagt 30552696  T
Q  301 ttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||||| ||||||||||| ||||||||| ||||    
T  30552697 ttatgaaaataatttatagctgatatgaaaaaagtt 30552732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 1741997 - 1742110
Alignment:
Q  213 tgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaa 312  Q
    ||||||| | |||||||| |||| ||||||||||||||||| |  |||| |||| |||| || ||||| ||||  ||| |||||||| |||||||||||     
T  1741997 tgagactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacag 1742096  T
Q  313 tttatagcttatat 326  Q
     ||||| |||||||    
T  1742097 cttatatcttatat 1742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 29429711 - 29429764
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatat 255  Q
    |||||||||||||||||||| |||||||| |||| ||||||||| |||||||||    
T  29429711 ataagcacttgtgagactgtttgggagagcttatagaaacaactaatgacatat 29429764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 337
Target Start/End: Complemental strand, 33942228 - 33942131
Alignment:
Q  240 acaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||| |  |||| || | ||||||||||||  || || |||| ||||| |||||||||||||| |||||||||| ||||||| |||||    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagttt 33942131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 15780124 - 15780064
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||||||||| ||| || |||||||||||||||||| |||||| |||||||||||    
T  15780124 agcttatttctataagctctgcacgatagcttatgaaaacaacttatagattatatgaaaa 15780064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 5043602 - 5043649
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||    
T  5043602 tccatgatagcttatgaaaacaacttctagcttatatgaaaacagttt 5043649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 22878214 - 22878155
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataa 261  Q
    |||||||||||||||||||| |||||||  |||| ||||||| |||||||| ||||||||    
T  22878214 ataagcacttgtgagactgtttgggagaccttatggaaacaaattatgacacatctataa 22878155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 40279257 - 40279190
Alignment:
Q  258 ataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||||| ||||||||||||  ||||| ||||||  ||||||||||||||||| ||||| ||||||    
T  40279257 ataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttata 40279190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 18066163 - 18066105
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||| |||||| |||||||||||||||||  |||||||||||||||||| | |||||||    
T  18066163 taagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaact 18066105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 332
Target Start/End: Original strand, 18179194 - 18179324
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||| ||  ||| ||| || ||||||  ||||| |||| ||||| || || | |||| ||||||| ||||   |||| |||||| |||||||    
T  18179194 ataagcacttgtaagtttgtttggaagtgtttatgaaaacatcttaagacatgtccattagctattttcagcttattttcgtaagttctccaggatagct 18179293  T
Q  302 tatgaaaacaatttatagcttatatgaaaat 332  Q
    ||||||| ||  |||||||||||||||||||    
T  18179294 tatgaaagcagcttatagcttatatgaaaat 18179324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 43065440 - 43065514
Alignment:
Q  238 aaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaa 312  Q
    |||||||||||||||| || ||||| | | ||||||| ||||| ||||| |||||| |||| |||||||||||||    
T  43065440 aaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaa 43065514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 10143202 - 10143153
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||||||||| || ||||||||||||| |||| |||||    
T  10143202 tctccatgatagcttatgaaaaaaacttatagcttatataaaaacagttt 10143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 28933866 - 28933809
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||||||| || |||| | |||||||||||||||||||||||| |||| |||||||||    
T  28933866 atttctatcagctctctaggatagcttatgaaaacaatttataacttaaatgaaaata 28933809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 34651996 - 34652097
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    ||||||||||| ||  | || || |||| ||||||||||||||||| || |||| || | |||| || ||||| ||||| |||||| |||||||||||||    
T  34651996 acttgtgagacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaa 34652095  T
Q  308 aa 309  Q
    ||    
T  34652096 aa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 37292387 - 37292436
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| ||||||||| |||||||| | ||||||||||||||||||||||    
T  37292387 tctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttt 37292436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 43173264 - 43173207
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||| |||||||||||| |||||| ||| |||||||  |||||||||||||||||||    
T  43173264 atttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaata 43173207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 43205351 - 43205290
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| ||||| ||||| ||||||||||||||||||  ||||| |||||||||||| |||||    
T  43205351 atttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagttt 43205290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 9996854 - 9996802
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacata 254  Q
    ||||| |||||||||||||  |||||||| |||| ||||||||||||||||||    
T  9996854 ataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacata 9996802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 10285936 - 10285848
Alignment:
Q  242 aacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaa 330  Q
    |||||||||||| || |||| || | |||| || ||||| ||||| |||| ||| ||||||||| |||| | |||||||||||||||||    
T  10285936 aacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaa 10285848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 17952742 - 17952790
Alignment:
Q  289 ctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| |||||||||||||||||  || |||||||||||||||||||||    
T  17952742 ctccaggatagcttatgaaaacatcttgtagcttatatgaaaatagttt 17952790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 1939323 - 1939421
Alignment:
Q  239 aacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagct-tatatgaaaatagttt 337  Q
    ||||||||||||||| || |||| || | |||| || ||||| ||||| ||||||  ||||||||||||||| | ||||||||  |||||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaac-agttatagctcaatatgaaaatagttt 1939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 332
Target Start/End: Complemental strand, 7862778 - 7862739
Alignment:
Q  293 atgatagcttatgaaaacaatttatagcttatatgaaaat 332  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  7862778 atgatagcttatgaaaccaacttatagcttatatgaaaat 7862739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 9478415 - 9478284
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| ||||||| |||||| || ||||||||||  ||||||||||| |||| || |||| || | |||| || | ||| || |  |||||| |||||||    
T  9478415 ataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagct 9478316  T
Q  302 tatgaaaacaatttatagcttatatgaaaata 333  Q
    || ||| |||   |||||||||||||||||||    
T  9478315 tacgaacacagcatatagcttatatgaaaata 9478284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 16353895 - 16353848
Alignment:
Q  284 aagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||    
T  16353895 aagatctccaagatagcttataaaaacagcttatagcttatatgaaaa 16353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 1625935 - 1625877
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||| |||||| |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  1625935 taagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaact 1625877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 6547290 - 6547248
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaac 244  Q
    |||||||||||||||||||| || |||||||||| ||||||||    
T  6547290 ataagcacttgtgagactgtttgtgagagtttatggaaacaac 6547248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 337
Target Start/End: Original strand, 9878637 - 9878771
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    ||||||||| |||||||||  || |||| |||| ||||||||||||||||| || ||||  | | |||  || ||||||  ||| |||||  ||||||      
T  9878637 taagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataagttgttttcgacttatttcttcaagctctccgggatagcga 9878736  T
Q  303 atgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||| ||||||| ||| | ||||||||||    
T  9878737 atgaaaacaacttatagcatatgtaaaaatagttt 9878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 43635076 - 43635186
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagctt 322  Q
    ||||||||  ||| |||| |||||||||||| ||| ||| || | || |||| ||||  ||||| | | ||||||||||||||| ||||| ||||||| |    
T  43635076 tgggagagcatatagaaaaaacttatgacatgtctgtaagctgttttaagcttattttcataagcttttcatgatagcttatgagaacaacttatagcgt 43635175  T
Q  323 atatgaaaata 333  Q
    |||| ||||||    
T  43635176 atataaaaata 43635186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 680583 - 680490
Alignment:
Q  238 aaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| |||||||||| | |||||||| | ||||||| ||||  | ||| ||| || ||||||||||||||| |  |||||||||||| |||||    
T  680583 aaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaa 680490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 37034132 - 37034031
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||||||||| | ||  |||| |||| |||||| |||| ||||| | |||||| | | |||| || ||||||||||| ||||||| ||| ||||||||    
T  37034132 acttgtgagactatttgttagagattatggaaacagcttaagacatgtttataaattgttttcaacttatttctataagctctccataatatcttatgaa 37034033  T
Q  308 aa 309  Q
    ||    
T  37034032 aa 37034031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 37276776 - 37276727
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| |||| ||||||||||||| ||||| |||||||||||| |||||    
T  37276776 tctccaggataacttatgaaaacaacttataacttatatgaaaacagttt 37276727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 37474792 - 37474743
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| |||| |||||||||||  |||||||||||||| |||||||||||    
T  37474792 ataagttctctatgatagcttagaaaaacaatttatagtttatatgaaaa 37474743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 41170639 - 41170585
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttta 338  Q
    ||||| ||||||||||||| ||||||||||  ||||||||  |||||||||||||||    
T  41170639 ataagctctccatgatagcatatgaaaacagcttatagct--tatgaaaatagttta 41170585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 43199285 - 43199236
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||||||| |||||||||||| |||||| |||| ||||||| |||||    
T  43199285 atttctataagttctccatgatagtttatgataacattttatagtttata 43199236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 44439408 - 44439453
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||||| ||||||||||||||||||||  |||| |||||||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaact 44439453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 9556262 - 9556226
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  9556262 gatagcttatgaaaacagtttatagcttgtatgaaaa 9556226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 9886340 - 9886300
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaa 330  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  9886340 tccaggatagcttaggaaaacaacttatagcttatatgaaa 9886300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 13189370 - 13189470
Alignment:
Q  232 ttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt-atgaaaacaatttatagcttatatgaaa 330  Q
    |||| ||||||| |||| ||||||| ||||| ||  ||||||| ||||| ||||| ||||||| |||  || |||||||||| ||||| |||| ||||||    
T  13189370 ttatggaaacaatttataacatatccataaattactttcagcttatttccataagctctccataatatttttatgaaaacaacttataacttacatgaaa 13189469  T
Q  331 a 331  Q
    |    
T  13189470 a 13189470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 17443562 - 17443602
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaaca 242  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  17443562 ataagcacttgtgagactgtttggaagagtttatggaaaca 17443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 22681208 - 22681268
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||| ||||| |||| | ||||| |||||||||||  ||||||||||||||||||    
T  22681208 agcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaa 22681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 25800852 - 25800816
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||  ||||||||||||||||||    
T  25800852 gatagcttatgaaaacagcttatagcttatatgaaaa 25800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 31228791 - 31228906
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||||||| |||||| | ||||  |||||| ||||||||| | ||||| || | || || | ||||| ||||  ||||||||||| ||    
T  31228791 ataaacacttgtgagactgtttgggagtgcttattcaaacaatttatgacatgtatataagctgtttttaggttatttccataaactctccatgataact 31228890  T
Q  302 --tatgaaaacaattt 315  Q
      ||||||||||||||    
T  31228891 tatatgaaaacaattt 31228906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Complemental strand, 33944620 - 33944592
Alignment:
Q  303 atgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||||||||||||||    
T  33944620 atgaaaacaatttatagcttatatgaaaa 33944592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 34926987 - 34926955
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatg 327  Q
    |||||||||||||||||| ||||||||||||||    
T  34926987 gatagcttatgaaaacaacttatagcttatatg 34926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 35993340 - 35993448
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||||||| ||||| |||||||| | ||  |||||  ||||||| | || ||||| | | ||||||| ||||  ||||| |||| ||||||||||||| |    
T  35993340 acttgtgatactgtttgggagagctgatataaacagtttatgacgtgtccataaattgttttcagcttattttcataagttctctatgatagcttatgca 35993439  T
Q  308 aacaattta 316  Q
    |||||||||    
T  35993440 aacaattta 35993448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 38077101 - 38077153
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    ||||||||||| ||||| |||||||||| ||||||| ||||| | ||||||||    
T  38077101 atttctataagctctccgtgatagcttaagaaaacagtttatcgattatatga 38077153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 341
Target Start/End: Original strand, 25182941 - 25183081
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatatt-cagctaatttctataagatctccatgatagc 300  Q
    ||||| |||||||||||||| || ||||| ||||  ||||||||||||||||||| |||| |||| || ||||  ||||| | ||  | |||||||||||    
T  25182941 ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccataagctatttttcagcatatttccacaaattttccatgatagc 25183040  T
Q  301 ttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||||  |||||||| |||||||||||| ||||||    
T  25183041 ttatgaaaacagcttatagctcatatgaaaatagcttaact 25183081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 43115172 - 43115048
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||| ||| ||| ||||||||| ||||||||||||||||| || ||||  | | ||||||| ||||| ||||| |||| ||||||| |    
T  43115172 ataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagtt 43115073  T
Q  302 tatgaaaacaatttatagcttatat 326  Q
     |||||||||| |||||||||||||    
T  43115072 catgaaaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 329
Target Start/End: Complemental strand, 11253617 - 11253491
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||| |||||||| ||| ||| |||||  ||||||||||||||||||||||||||| | ||||||  |||||  |||| |||| | |||||||    
T  11253617 ataagcacttgagagactgtttggcagaatttataaaaacaacttatgacatatctataaactgttttcagcctatttccctaagctctctaggatagct 11253518  T
Q  302 tatgaaaacaatttatagcttatatgaa 329  Q
    |||| |||||  ||||||||||||||||    
T  11253517 tatg-aaacagcttatagcttatatgaa 11253491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 37273250 - 37273135
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||| |||||||||| |||||||| |||| ||||||||||||||||| || ||||  | | |||| || ||||| ||||| |||||| |||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagct 37273151  T
Q  302 tatgaaaacaatttat 317  Q
    |||||||||| |||||    
T  37273150 tatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 14548679 - 14548804
Alignment:
Q  206 gcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatg 305  Q
    |||||||||||||||| || ||||| ||||  ||||||| |||||||| |  |||  || | ||||||| ||||| ||||| ||||||  ||| ||||||    
T  14548679 gcacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  306 aaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||||||||||||||||    
T  14548779 aaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 337
Target Start/End: Complemental strand, 27792978 - 27792853
Alignment:
Q  212 gtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||||||||| ||  ||||||||| |||| | ||| ||||| || |||||  | | ||||||| ||||||||||| ||| |||||||| |||||||||||    
T  27792978 gtgagactgtttgatagagtttatggaaatagcttttgacaaatttataagttgttttcagcttatttctataagctctacatgatagtttatgaaaaca 27792879  T
Q  312 atttatagcttatatgaaaatagttt 337  Q
    | ||  ||||||||||||||||||||    
T  27792878 acttgcagcttatatgaaaatagttt 27792853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 36646340 - 36646465
Alignment:
Q  206 gcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatg 305  Q
    |||||||| ||||| | |||||||| |||| ||||| ||||||| ||| || |||| || | |||| || ||||||||||  |||| | |||||||||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatg 36646439  T
Q  306 aaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||| ||||||||||||    
T  36646440 aaaacaagttataacttatatgaaaa 36646465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 28801360 - 28801250
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatag--cttatgaaaacaatttatagc 320  Q
    ||||||||||||| |||||| || ||||||| |||| ||||||||||||||| ||||| | ||| ||||||||| ||  |||| |||||||| |||||||    
T  28801360 tgggagagtttatggaaacagctcatgacatgtctagaaactatattcagcttatttccacaagctctccatgacagctcttacgaaaacaacttatagc 28801261  T
Q  321 ttatatgaaaa 331  Q
     || |||||||    
T  28801260 atacatgaaaa 28801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 43875685 - 43875629
Alignment:
Q  281 tataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  43875685 tataagctctccatgatagcttatgaaaacaacttatagcttatatgagaacagttt 43875629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 341
Target Start/End: Complemental strand, 21574595 - 21574468
Alignment:
Q  213 tgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaa 312  Q
    ||||||||| |||||||| ||||  |||||||||||||||| |  |||| ||   || |||| ||||| ||||| |||||||| |||||||| |||| ||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttat-aaaaaaa 21574497  T
Q  313 tttatagcttatatgaaaatagtttaact 341  Q
     |||||||||||||| ||| | |||||||    
T  21574496 gttatagcttatatgtaaacaatttaact 21574468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 48286831 - 48286903
Alignment:
Q  269 tcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||| ||||||||||| ||| ||||||| |||||||||||| |||||| |||||||| ||| | |||||||    
T  48286831 tcagcttatttctataagctctacatgataacttatgaaaacagtttataacttatatggaaacaatttaact 48286903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 44284085 - 44284143
Alignment:
Q  253 tatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||| |||| |||| ||||||| ||||||||||| |||||| |||||||||||||||||    
T  44284085 tatccataagctattttcagcttatttctataagctctccaggatagcttatgaaaaca 44284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 23785305 - 23785244
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaa 329  Q
    |||||||  |||| ||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  23785305 ttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaa 23785244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 30923853 - 30923961
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||||||| |  ||||| | || |||||| |||||||||| ||||||| || | ||||||| ||||||||||  |||| | ||||| |    
T  30923853 ataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggt 30923951  T
Q  302 tatgaaaaca 311  Q
    ||||||||||    
T  30923952 tatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 37689432 - 37689477
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||    
T  37689432 atagcttatgaaaatagtttatagcttatatgaaaataatttaact 37689477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 329
Target Start/End: Original strand, 24887273 - 24887364
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaa 329  Q
    ||||||| ||||||||| || || |||| | ||||||| ||| | ||||| |||||| |||||||||||||||||  || |||||||||||||    
T  24887273 gaaacaatttatgacatgtc-attaactgttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaa 24887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 1125786 - 1125849
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| | ||| ||||| |||||| |||| |||| |||||||| ||||||||||||||||||    
T  1125786 ttcagcttacttccataagctctccaagataacttaagaaaacaagttatagcttatatgaaaa 1125849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 22667519 - 22667413
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| || |||||||||| |||||| | ||| |||| || | ||  ||| || |||| |||||  |||| |||||| |||||||    
T  22667519 ataagcacttgtgagactgtttgagagagtttatggaaacagcatataacatttc-agaagttatttttagcttatttccgtaagctctccaagatagct 22667421  T
Q  302 tatgaaaa 309  Q
    ||||||||    
T  22667420 tatgaaaa 22667413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 22724158 - 22724052
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| || |||||||||| |||||| | ||| |||| || | ||  ||| || |||| |||||  |||| |||||| |||||||    
T  22724158 ataagcacttgtgagactgtttgagagagtttatggaaacagcatataacatttc-agaagttatttttagcttatttccgtaagctctccaagatagct 22724060  T
Q  302 tatgaaaa 309  Q
    ||||||||    
T  22724059 tatgaaaa 22724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 26542653 - 26542546
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||| ||||||| ||| |||| |||  |||||||||||||| || |||||||  | | |||| || ||||| ||||  ||||||| ||||||    
T  26542653 ataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataacttgttttcaacttatttccataaactctccataatagct 26542554  T
Q  302 tatgaaaa 309  Q
    ||||||||    
T  26542553 tatgaaaa 26542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 41057060 - 41057025
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  41057060 atagcttatgaaaacaacttatagcttatatgaaaa 41057025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 41452639 - 41452504
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||||||| | | || ||||  |||| |||||||||||||| || ||||||| || | |||| || ||||| | ||  |||||| |||||||    
T  41452639 ataagtacttgtgagagtatttgagagaccttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagct 41452540  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||  ||| | || ||||||||| |||||    
T  41452539 tatgaaaacagcttacaactaatatgaaaacagttt 41452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 41724298 - 41724203
Alignment:
Q  232 ttatcgaaacaacttatgacatatctataaactatattcagctaatttc-tataagatctccatgatagcttatgaaaacaatttatagcttatat 326  Q
    |||| ||||||||||||||||| || ||||  | | ||||||| ||||  |||||| |||| | ||||||| ||||||||| ||||||||||||||    
T  41724298 ttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatat 41724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 337
Target Start/End: Original strand, 2175804 - 2175937
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    ||||||||||| ||||| | || || |||||||  |||||||||||||||| | | ||| || | |||| ||  |||||||||  |||| | | ||| ||    
T  2175804 taagcacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtttgtaagctgttttcaacttgtttctataaactctcaagggtagttt 2175903  T
Q  303 atgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||| |||||||||||||||||||| ||| ||||||    
T  2175904 atg-aaacaatttatagcttatataaaagtagttt 2175937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 2719517 - 2719463
Alignment:
Q  269 tcagctaatttctataagatctccatgatagcttatgaaaacaatttatagctta 323  Q
    |||||| ||||  ||||| |||||| ||||||||||||||||| |||||||||||    
T  2719517 tcagcttattttcataagttctccaagatagcttatgaaaacagtttatagctta 2719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 34254805 - 34254891
Alignment:
Q  245 ttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||| |||| |||  ||||||| ||||  ||||| ||||||  |||||||||||||| | ||||||||| |||| ||||    
T  34254805 ttatgacatatccataagctactttcagcttatttacataagttctccagaatagcttatgaaaatagtttatagctaatataaaaa 34254891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 38462304 - 38462262
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| |||||||| |||||||||| |||||    
T  38462304 gatagcttatgaaaacagtttatagcatatatgaaaacagttt 38462262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 51510216 - 51510278
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||| ||||| ||||| |||||| |||| ||||||||||||| |||||| |||||| ||||||    
T  51510216 agcttatttccataagctctccacgataacttatgaaaacaacttatagtttatatcaaaata 51510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 16990205 - 16990254
Alignment:
Q  292 catgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||| ||| |||||||| ||||| |||||||||||| |||||||||    
T  16990205 catgatagtttaagaaaacaacttatatcttatatgaaaacagtttaact 16990254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 21367717 - 21367644
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||| ||||  ||||| |||||| |||||||||||||||||| |||||  ||||| ||||| | |||||||    
T  21367717 ttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaact 21367644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 21872313 - 21872354
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| |||||||||||||||||| ||||||||||||| ||||    
T  21872313 tccaggatagcttatgaaaacaacttatagcttatatcaaaa 21872354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 24235731 - 24235772
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagttt 24235772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 31010518 - 31010409
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||||||  ||| || || || |||| ||||||||||||||||| || |||| || | ||||||| | ||| ||||| |||| ||||||| |    
T  31010518 ataagaacttgtgagtgtgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttcagcttaattccataagctctctatgataggt 31010419  T
Q  302 tatgaaaaca 311  Q
    || |||||||    
T  31010418 tacgaaaaca 31010409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 33405201 - 33405250
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| ||| || |||||||||||||||||  ||||||||||||||||||    
T  33405201 ataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaa 33405250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 45432959 - 45433032
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||| ||||| ||||| ||| || |||  ||| |||||||||||||||||| ||||||||| | |||||||    
T  45432959 ttcagcttatttccataagctctacaggatgacttgtgaaaacaatttatagctcatatgaaaacaatttaact 45433032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 47904084 - 47904149
Alignment:
Q  269 tcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatag 334  Q
    |||||| |||||  |||| ||| || |||||||||||||||| | |||||| ||||||||||||||    
T  47904084 tcagcttatttccgtaagctcttcacgatagcttatgaaaaccacttatagattatatgaaaatag 47904149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 48807726 - 48807689
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  48807726 cttatgaaaacaacttatagcttctatgaaaatagttt 48807689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 337
Target Start/End: Complemental strand, 2201209 - 2201109
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    |||||||||||||| || |  ||||||| | |||||||  ||||  |||  | |||| ||||||| |||||||||  |||||||||||||||||| ||||    
T  2201209 gaaacaacttatgatatgttcataaactcttttcagcttttttccttaaactatccaagatagctaatgaaaacagcttatagcttatatgaaaacagtt 2201110  T
Q  337 t 337  Q
    |    
T  2201109 t 2201109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 2318695 - 2318631
Alignment:
Q  268 ttcagctaatttctataagatctccatga-tagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||| ||||||||||| |||||| || || ||||| ||||||| |||||| |||||||||||    
T  2318695 ttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaa 2318631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 19679783 - 19679843
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| |||||||| || ||  |||||||| ||||||||||||  |||||||||||||||||    
T  19679783 agcttatttctatcagctcggcatgatagtttatgaaaacaacctatagcttatatgaaaa 19679843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 22214706 - 22214742
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||| |||||| |||||||||||    
T  22214706 gatagcttatgaaaacaacttataggttatatgaaaa 22214742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 34760978 - 34760918
Alignment:
Q  281 tataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||| ||||  |||| || |||||||||| |||||||||||||| || |||||||||||    
T  34760978 tataagctctcagtgatcgcctatgaaaacagtttatagcttatataaacatagtttaact 34760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 49605805 - 49605861
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatcta 258  Q
    ||||| |||||||||| ||| || ||||||| || ||||||||||||||||| ||||    
T  49605805 ataagtacttgtgagagtgtttgagagagttcatggaaacaacttatgacatgtcta 49605861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 4549495 - 4549631
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaa-ctatattcagctaatttctataagatctccatgatagc 300  Q
    ||||||| || ||||||||| |||||||| |||| ||||||||||||||||| ||||||||  | | |||| | |||||| ||||| |||||| ||| ||    
T  4549495 ataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaagttgttttcaacaaatttcaataagctctccaggattgc 4549594  T
Q  301 ttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||  ||||||||| |||||||| |||||    
T  4549595 ttatgaaaacatcttatagcttgtatgaaaacagttt 4549631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 307
Target Start/End: Original strand, 32515395 - 32515500
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| |||||||| |||| |||||| | |||||||| || ||||  | | |||| || || |||||||| ||||||||||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagct 32515494  T
Q  302 tatgaa 307  Q
    ||||||    
T  32515495 tatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 44031953 - 44032082
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||| ||||||| | |||||| ||||  || || || ||||||| || |||| |||| ||||||||||||| ||||| ||| || |||| ||    
T  44031953 ataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttcaagataact 44032052  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    || ||||| | |||||||||||||||||||    
T  44032053 taagaaaatagtttatagcttatatgaaaa 44032082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 31517694 - 31517822
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||||||| |||||||  ||||| |||||||| ||||||| |  |||| || | ||||||| ||||  ||||| |||||| || || |    
T  31517694 ataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagat 31517793  T
Q  302 tatgaaaacaatttatagcttatatgaaa 330  Q
    |||||| |||  |||||||||||||||||    
T  31517794 tatgaagacagcttatagcttatatgaaa 31517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 15515654 - 15515528
Alignment:
Q  209 cttgtgagactgtgt----gggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttat 304  Q
    |||||||||||||||    | ||||||||||  |||||||||||||||| || |||  |||| ||||  | ||||| ||||| | ||||||||| |||||    
T  15515654 cttgtgagactgtgtgtgcgagagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttat 15515555  T
Q  305 gaaaacaatttatagcttatatgaaaa 331  Q
    |||||||| |||||||||||| |||||    
T  15515554 gaaaacaacttatagcttatacgaaaa 15515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 23373267 - 23373375
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||| ||| |||||||| |||| ||||||||||||||||| || |  | || | ||||||| |||||| |||| ||| || |||||||    
T  23373267 ataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca-catctgttttcagcttatttctgtaagctcttcaggatagct 23373365  T
Q  302 tatgaaaaca 311  Q
    ||||||||||    
T  23373366 tatgaaaaca 23373375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 25006068 - 25006117
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25006068 ataagatctccaagatagcttatgaaaacaacttatagcttatatgaaaa 25006117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 15581370 - 15581239
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||||| ||| ||| |||| | || ||||||||||||||||| ||||||| || | ||||||  |||||||||||  ||| |  ||| ||    
T  15581370 ataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccctctagcatacct 15581271  T
Q  302 tatgaaaacaatttatagcttatatgaaaata 333  Q
    ||| |||| |  ||||||||||||| ||||||    
T  15581270 tataaaaaaagcttatagcttatataaaaata 15581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 4078192 - 4078238
Alignment:
Q  291 ccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  4078192 ccatgatagcttatgaaaacaacttatagattatatgaaaatagttt 4078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 6231805 - 6231899
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||| ||||||| || ||||||| | ||||||| ||||||||||| ||| || | ||||||| |||||||  |||||| |||||||||||    
T  6231805 gaaacaactaatgacatgtccataaactgttttcagcttatttctataagttcttcaggttagcttacgaaaacagcttatagattatatgaaaa 6231899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 25005830 - 25005880
Alignment:
Q  281 tataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  25005830 tataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 25005880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 5150979 - 5150918
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| | |||| |||||||||||||    
T  5150979 atttctataagctcttcatgatagcttatgaaaacaaattacaacttaaatgaaaatagttt 5150918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 8130486 - 8130417
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||  |||| ||||| | ||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  8130486 ttcagcttgtttccataagttttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagttt 8130417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 17422967 - 17423020
Alignment:
Q  277 tttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaa 330  Q
    |||||||||  ||||||||||||| ||||||||||| |||||||||||||||||    
T  17422967 tttctataacctctccatgatagcatatgaaaacaacttatagcttatatgaaa 17423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 27887114 - 27887207
Alignment:
Q  244 cttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||| || ||||| | | || |||| |||| |||| | |||||||||||| |||||||||||| |||||||||||||| |||| ||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaattgttt 27887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 42556671 - 42556720
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  42556671 tctccatgatagcttatgaaaacaacttatagcttatataaaagtagttt 42556720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 48830124 - 48830165
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagttt 48830165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 3597227 - 3597354
Alignment:
Q  194 ctaatgaaataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctcca 293  Q
    ||||||| |||| ||||||||||||||| ||| |||||| ||  ||| ||||||||||||  | |||| |||| ||||||| ||||| ||||  | | |     
T  3597227 ctaatgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccataagctattttcagcttatttccataaactgttcg 3597326  T
Q  294 tgatagcttatgaaaacaatttatagct 321  Q
    |||||||||||  |||||||| ||||||    
T  3597327 tgatagcttatataaacaattaatagct 3597354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 44422815 - 44422680
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||| ||||||||| |||||||| ||||  ||| | |||||||||| || |||| ||   | ||||| ||||  ||||| |||||| |||||||    
T  44422815 ataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagct 44422716  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||| |||| |  |||||||||||||||||| |||||    
T  44422715 tataaaaatagcttatagcttatatgaaaacagttt 44422680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 3052681 - 3052767
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||| |||| |||| ||||| |||||| |  |||| ||||||||||||  |||| ||||| |||||||| |||||||||||||    
T  3052681 tgggagagcttatggaaaaaacttttgacatgttcataagctatattcagcttctttcaataagctctccatgctagcttatgaaaa 3052767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 12564921 - 12564963
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  12564921 gatagcttatgaaaacaacttatagcttatatgaaaacagttt 12564963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 7218108 - 7218157
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||| |||||| ||||| |||||||||||| ||||||||||||||||||    
T  7218108 ataagttctccaggataggttatgaaaacaacttatagcttatatgaaaa 7218157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 30257733 - 30257664
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||| |||||||||||  ||||| ||||| |||||||||||| ||| |||||||||| ||| |||||    
T  30257733 ttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagttt 30257664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 35590912 - 35590969
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||| ||||| ||||| ||||||||||||||||||||| | | ||||||||||||    
T  35590912 ttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttata 35590969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 37842375 - 37842448
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||| |||| |||||| ||| || |||||||||||||||||| |||||||||||  ||| | |||||||||    
T  37842375 ttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaact 37842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 45205094 - 45205049
Alignment:
Q  292 catgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||    
T  45205094 catgatagcttatgaaaacaacttctagcttatatggaaatagttt 45205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 337
Target Start/End: Complemental strand, 4622218 - 4622074
Alignment:
Q  193 actaatgaaataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctcc 292  Q
    |||||||| ||||| |||||| ||||||| ||| |||  | || | |||| |||||||||| || |||| || | || |||| ||||  | ||| |||||    
T  4622218 actaatgacataagaacttgttagactgtttggaagatctaatgggaacatcttatgacatgtccataagctgtttttagcttattttcacaagctctcc 4622119  T
Q  293 atgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    | |||||| |||| |||||  |||||||||||||||||| |||||    
T  4622118 aagatagcatatggaaacagcttatagcttatatgaaaagagttt 4622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 12564453 - 12564581
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||||||||| |||||| |||||||| |||   | | | |||||||||  || ||||  | | ||||||| ||||| ||||| |||||| |||||||    
T  12564453 ataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagcttatttccataagttctccaagatagct 12564552  T
Q  302 tatgaaaacaatttatagcttatatgaaa 330  Q
    |||||||||||  |||| ||| |||||||    
T  12564553 tatgaaaacaacctataccttgtatgaaa 12564581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 17269285 - 17269237
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||||||    
T  17269285 taagctctccaggatagcttatgaaaacaacttattgcttatatgaaaa 17269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 23902087 - 23902151
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaat 332  Q
    ||||||| | ||| ||||| |||| | |||||||| ||||||||| |||||||||||||||||||    
T  23902087 ttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaat 23902151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 30259465 - 30259565
Alignment:
Q  227 agagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagc-ttatgaaaacaatttatagcttata 325  Q
    |||| |||| ||||||||||| ||||| || ||||| | | |||| || ||||| ||||| ||||||||||||| ||||| |||||  ||||||||||||    
T  30259465 agagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttata 30259564  T
Q  326 t 326  Q
    |    
T  30259565 t 30259565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 1255378 - 1255445
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatatt 269  Q
    |||| |||||||||||||||  | |||||||||  ||||||||||||||||| ||  |||||||||||    
T  1255378 ataatcacttgtgagactgttagagagagtttacagaaacaacttatgacatgtccttaaactatatt 1255445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 1432551 - 1432508
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||    
T  1432551 ataagttctccaagatagtttatgaaaacaatttatagcttata 1432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 4868511 - 4868465
Alignment:
Q  206 gcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||    
T  4868511 gcacttgtgagactgtttgagagagtttat-gaaacaacttatgacat 4868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 7136994 - 7137085
Alignment:
Q  244 cttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagt 335  Q
    ||||||||||||  ||||  ||| ||||||| ||||  ||||| |||||| |||||||||||||||||  |||||| |||||  ||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattatacaaaaatagt 7137085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 9656678 - 9656627
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||| ||||||||||||| |||  |||||||||||||||||||| |||||||    
T  9656678 tccaggatagcttatgaacacagcttatagcttatatgaaaataatttaact 9656627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 10581111 - 10581166
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| || |||| ||||||||||||||||| |||||||||| ||||||| |||||    
T  10581111 ataagttccccataatagcttatgaaaacaacttatagcttaaatgaaaaaagttt 10581166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 26179587 - 26179536
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||| |||||||||||||||  |||||||||||  |||||||||||||||||    
T  26179587 ataaacacttgtgagactgttagggagagtttaaggaaacaacttatgacat 26179536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 27738228 - 27738263
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaa 27738263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 40485727 - 40485778
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||||||||||||||||||| |||||||  |||| |||||| ||||||||||    
T  40485727 ataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacat 40485778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 40751165 - 40751220
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaa-tttatagcttatatgaaaatagttt 337  Q
    |||| |||||||||| |||||||||||||| || |||| |||||||||||||||||    
T  40751165 taagctctccatgatggcttatgaaaacaacttaatagtttatatgaaaatagttt 40751220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 341
Target Start/End: Complemental strand, 52286786 - 52286655
Alignment:
Q  211 tgtgagactgtgtgggagag-tttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    ||||||||||| || ||||| ||||  |||||| ||| ||| || || |||| |||| || |||| ||||| ||||  ||| || |||  ||||||||||    
T  52286786 tgtgagactgtttgagagagctttacggaaacatcttctgatatgtccataagctatttttagcttatttccataaactcttcaagatgacttatgaaaa 52286687  T
Q  310 caatttatagcttatatgaaaatagtttaact 341  Q
     | |||||||||||||||||||| ||||||||    
T  52286686 tagtttatagcttatatgaaaattgtttaact 52286655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 332
Target Start/End: Complemental strand, 17420319 - 17420189
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||| ||||||| | | |||| ||||  ||||||||||| |||| || ||||| | | |||| || ||||| || || | ||   |||||||    
T  17420319 ataaacacttgttagactgttttgaagagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagct 17420220  T
Q  302 tatgaaaacaatttatagcttatatgaaaat 332  Q
    || ||||||| ||||||||||||||||||||    
T  17420219 tacgaaaacagtttatagcttatatgaaaat 17420189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 18019100 - 18019062
Alignment:
Q  303 atgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  18019100 atgaaaacaacttacagcttatatgaaaatagtttaact 18019062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 29007771 - 29007805
Alignment:
Q  303 atgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||| ||||||||||||||||||||||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagttt 29007805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 30371229 - 30371135
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||| ||||||| || ||||  | | ||||||| ||||| ||| | ||||||  ||  ||||||||||||| ||||||||||||||||||    
T  30371229 gaaacaactaatgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaa 30371135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 33527464 - 33527422
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttat 324  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||    
T  33527464 ataagctctccatgacagctaatgaaaacaatttatagcttat 33527422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 331
Target Start/End: Original strand, 13905777 - 13905806
Alignment:
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||||||||||||||||    
T  13905777 tatgaaaacaatttatagcttatatgaaaa 13905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 15579598 - 15579469
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||  ||||||| |||||||| || | ||||||||||||||||| || ||||  | |  |||||| ||||| ||||  ||  ||||||||||    
T  15579598 ataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttccataaactcaacatgatagct 15579499  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    || || ||||  |||||||||| |||||||    
T  15579498 tacgagaacagcttatagcttacatgaaaa 15579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 25479631 - 25479570
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaa 329  Q
    ||||||| ||||  ||||| |||| | |||||||||||||||||| ||||||| ||||||||    
T  25479631 ttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaa 25479570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 27140570 - 27140485
Alignment:
Q  226 gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    |||||||||  |||||| |||||||||| || ||||  | | ||||||| ||||  ||||| ||||||||||||||||| ||||||    
T  27140570 gagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaaca 27140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 330
Target Start/End: Original strand, 28482222 - 28482315
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaa 330  Q
    |||||| ||||||| ||||  ||||||||| || |||| ||||   |||| |||||| |||| ||||| ||||||  |||||||||||||||||    
T  28482222 gaaacatcttatgatatattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttatatgaaa 28482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 28689441 - 28689537
Alignment:
Q  237 gaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttat--gaaaacaatttatagcttatatgaaaa 331  Q
    |||||| |||||||||| || ||||  | | ||||||| ||||  ||||| | |||| ||||||||||  |||||||| ||||||||||||||||||    
T  28689441 gaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 5157188 - 5157140
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatga 250  Q
    |||| ||||||||| ||||| |||||||| |||| ||||||||||||||    
T  5157188 ataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 6074495 - 6074451
Alignment:
Q  297 tagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||| |||||||| | |||||||||||||||| |||||||||    
T  6074495 tagcttaagaaaacaactcatagcttatatgaaaacagtttaact 6074451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 28467356 - 28467392
Alignment:
Q  297 tagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||||||||||||||| || |||||||||||||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaata 28467392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 29045952 - 29045992
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    |||||| || ||||||||||||||| |||||||||||||||    
T  29045952 tctccaggacagcttatgaaaacaacttatagcttatatga 29045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 46980182 - 46980218
Alignment:
Q  301 ttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||||| |||||||||||| |||||    
T  46980182 ttatgaaaacaatttataacttatatgaaaacagttt 46980218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 6509281 - 6509381
Alignment:
Q  226 gagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||| |||| |||||| ||||||||||  ||||||||||| |||| || ||||| ||||| |||||| |||||||||||||||||  ||||||||||||    
T  6509281 gagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttatagcttata 6509380  T
Q  326 t 326  Q
    |    
T  6509381 t 6509381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 39551163 - 39551299
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||| |||||| ||||| ||||||| ||||| ||||||||||||||||| || | || || | || | || |||| |||||| |||||| || ||||    
T  39551163 ataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagct 39551262  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttta 338  Q
    ||||||||||| ||||||||| |||||| | ||||||    
T  39551263 tatgaaaacaacttatagcttgtatgaagacagttta 39551299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 31884624 - 31884581
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31884624 tctccatgatagcttatgaaaacaatttatagcttatatgaaaa 31884581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 4055585 - 4055679
Alignment:
Q  217 actgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaaca 311  Q
    ||||| ||||||||||||| |||| |||||||||||| || ||||||| | ||||||| |||||  |||| ||||   |||||||||||||||||    
T  4055585 actgtttgggagagtttatagaaataacttatgacatgtccataaactgttttcagcttatttccttaagctctctgagatagcttatgaaaaca 4055679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 42370324 - 42370450
Alignment:
Q  211 tgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaac 310  Q
    ||||| ||||| ||||| |||||||  ||| | | |||||||| |||| ||||| | ||||||| ||||| ||||  ||| ||||||||||||||| |||    
T  42370324 tgtgaaactgtttgggaaagtttatgaaaatagcgtatgacatgtctacaaactgttttcagcttatttccataaactcttcatgatagcttatgagaac 42370423  T
Q  311 aatttatagcttatatgaaaatagttt 337  Q
    | ||||||||| |||  ||||||||||    
T  42370424 agtttatagctcataaaaaaatagttt 42370450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 24558883 - 24558830
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||| |||||||    
T  24558883 tctccaagatagcttatgaaaacaacttatagcttatacgaaaataatttaact 24558830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 11795166 - 11795079
Alignment:
Q  244 cttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||| || |||| || | ||||||| ||||| ||||| ||||||| ||||||||||||| ||  ||||| ||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaa 11795079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Original strand, 11813059 - 11813194
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| |||| |||| ||||| |||||||  |||| ||||||| |||||||||||| |||  || | ||||||| |||||| |||| |||  | |||||||    
T  11813059 ataaacactcgtgaaactgtatgggagaacttatggaaacaatttatgacatatccataggctgttttcagcttatttctgtaagctcttgaagatagct 11813158  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||  |||||  ||||||| ||| |||||    
T  11813159 tatgaaaacagattataaattatatggaaacagttt 11813194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 30013334 - 30013199
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||||| |||||||||||| |  || || |||| |||||| ||||| |  | ||  |||||||| ||||||| ||||| || || ||| || |||||||    
T  30013334 ataagcatttgtgagactgtttttgaaagcttatggaaacatcttatcaagtgtccctaaactattttcagcttatttccattagttctacaggatagct 30013235  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||  |||||||||||||| ||| |||||    
T  30013234 tatgaaaacagcttatagcttatatggaaacagttt 30013199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 30191095 - 30191146
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacat 253  Q
    |||||||||||| ||||||| |||||||| |||| |||||||||||||||||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacat 30191146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 341
Target Start/End: Original strand, 7918735 - 7918866
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||||||| |||||||| ||||  |||||||||||        ||||| || | ||||||| ||||| | ||| ||| || |||||||    
T  7918735 ataaacacttgtgagactgtttgggagagcttatgaaaacaacttat--------tataatctgttttcagcttatttccacaagctctacaagatagct 7918826  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||||||| |||||||||| | ||||| | |||||||    
T  7918827 tatgaaaacaacttatagcttacaagaaaaaaatttaact 7918866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 10460638 - 10460584
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||| ||| ||||||||||||||||||| | ||||||||| ||||||||||||||    
T  10460638 taagctctacatgatagcttatgaaaaccacttatagcttgtatgaaaatagttt 10460584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 11183625 - 11183535
Alignment:
Q  238 aaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatga 328  Q
    ||||||||||||| || ||||||| || | ||||||| ||||| ||||| |||||| | |||||| ||||||||  |||||||| ||||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaatatga 11183535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 29973104 - 29973062
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  29973104 gatagcttatgaaaacaacttatagcttatgtgaaaatagttt 29973062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 9836882 - 9836943
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| ||||| |||||| |||||||||||||||||  || || ||||||||||||||||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagttt 9836943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 28769359 - 28769428
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||| ||||| ||||  ||||||  ||||||||||||||||  |||||||||||| |||||||||||    
T  28769359 ttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagttt 28769428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 35869859 - 35869818
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  35869859 atagcttatgaaaacaacttatagcttatatgaaaattgttt 35869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 39881772 - 39881821
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttat 317  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||||||||||    
T  39881772 ttcagcttatttccataagctctccatgatagcttataaaaacaatttat 39881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 9834836 - 9834872
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9834836 gatagcttatgaaaacaacttatagcttatatgaaaa 9834872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 12972974 - 12972915
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataa 261  Q
    ||||||| |||||||||||| |||||||  ||||  ||||| ||||||||||||||||||    
T  12972974 ataagcatttgtgagactgtttgggagatattatgaaaacagcttatgacatatctataa 12972915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 14949974 - 14949875
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| | |||||| ||||  ||| |||||||||||| || |||| || | ||||||| ||||||||||  |||  | |||||||||||||||    
T  14949974 ttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 27645982 - 27645931
Alignment:
Q  240 acaacttatgacatatctataaactatattcagctaatttctataagatctc 291  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||| ||||    
T  27645982 acaacttatgacatatctataagctattttcaacttatttctataagctctc 27645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 35298488 - 35298555
Alignment:
Q  259 taaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatat 326  Q
    |||||||| ||||||| |||| | || | || |||||||||||||||||||||| |||||| ||||||    
T  35298488 taaactattttcagcttatttatgtaggctcaccatgatagcttatgaaaacaacttatagtttatat 35298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 11056714 - 11056760
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| || ||||||||| ||||||||||||||||||||||| ||||    
T  11056714 gataggttttgaaaacaacttatagcttatatgaaaatagttcaact 11056760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 25869241 - 25869327
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    ||||||||| ||| |||| |||||||||||| || ||||  | | ||||||| ||||| ||||  ||||||||||||| ||||||||    
T  25869241 tgggagagtctatggaaataacttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaa 25869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 29169890 - 29169995
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||||| | ||| |||||||| ||||  ||||| | ||||||||||| |||| |||| || |||| ||||| |||||  ||||| | |||||    
T  29169890 ataagcacttgtgaaattgtttgggagagcttatgaaaacagcatatgacatatccataagctatttttagctcatttccataagccctccaag-tagct 29169988  T
Q  302 tatgaaa 308  Q
    |||||||    
T  29169989 tatgaaa 29169995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 29342308 - 29342262
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||||||||||||| ||||| || |||||||||||||| |||||||    
T  29342308 gatagcttatgaaaataatttgtaacttatatgaaaataatttaact 29342262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 337
Target Start/End: Complemental strand, 31862603 - 31862474
Alignment:
Q  207 cacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    ||||||| ||||||| || ||||||| |  ||| ||||||||||| |||  |||| || | ||||||| ||||  ||||| |||| | |||| |||||||    
T  31862603 cacttgttagactgtttgagagagtt-acggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatga 31862505  T
Q  307 aaacaatttatagcttatatgaaaatagttt 337  Q
    |||||  |||||||||||| || ||||||||    
T  31862504 aaacatcttatagcttatacgagaatagttt 31862474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 32507267 - 32507229
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagc 320  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  32507267 ataagttctccatgatagcttatgaaaacagtttatagc 32507229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 36643904 - 36643954
Alignment:
Q  259 taaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||| ||||||| ||||| ||| | ||||||||||||||||||||||    
T  36643904 taaactattttcagcttatttccatacgttctccatgatagcttatgaaaa 36643954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 4181451 - 4181504
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatat 255  Q
    |||| ||||| ||||||| | ||||||||||||| |||| ||||||||||||||    
T  4181451 ataaacacttttgagactatttgggagagtttatggaaaaaacttatgacatat 4181504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 4558840 - 4558775
Alignment:
Q  276 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| ||||| |||| | ||||||||||| |||||  ||||||| |||||||||||| |||||||    
T  4558840 atttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaact 4558775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 6864507 - 6864548
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| ||||| |||| |||||||||||||    
T  6864507 atagcttatgaaaacaacttataacttacatgaaaatagttt 6864548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 7714358 - 7714229
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||| ||||||||||||||| ||| | || || | |||||||||||||| || || || | || | |||| || ||||  || || |||||| |||||||    
T  7714358 ataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatagct 7714259  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
     |||||||||| |||||| | |||||||||    
T  7714258 catgaaaacaacttatagttgatatgaaaa 7714229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 44401671 - 44401575
Alignment:
Q  207 cacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttat 304  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| ||||| |  ||| | | | ||||||| ||||| ||||| |||||| ||| ||||||    
T  44401671 cacttgtgagactgtttgggatagtttatagaaacaactta-gacatgttcatacattgttttcagcttatttccataagttctccaggatggcttat 44401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 13652250 - 13652202
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||||  ||||||||| ||||||||||||| ||||||||||||    
T  13652250 taagctctccagaatagcttataaaaacaatttataacttatatgaaaa 13652202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 13710893 - 13710845
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||| ||||||  ||||||||| ||||||||||||| ||||||||||||    
T  13710893 taagctctccagaatagcttataaaaacaatttataacttatatgaaaa 13710845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 24326147 - 24326107
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaaca 242  Q
    |||||||||||||||||||| |||||||| |||| ||||||    
T  24326147 ataagcacttgtgagactgtttgggagagcttatggaaaca 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 34770915 - 34770879
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||||| |||||||||| |||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaa 34770879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 37740403 - 37740458
Alignment:
Q  224 gggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttc 280  Q
    |||||||||||| ||||||||||||||||| || || |||||| ||||||| |||||    
T  37740403 gggagagtttatggaaacaacttatgacatgtccat-aactattttcagcttatttc 37740458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 2996689 - 2996560
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||| ||||||||| || ||||| ||||  |||||||||||||||| || |||| || | |||| || ||||  ||| | |||||| |||||||    
T  2996689 ataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagct 2996590  T
Q  302 tatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||||| ||||| ||||||| ||||    
T  2996589 tatgaaaacaacttataacttatataaaaa 2996560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 333
Target Start/End: Complemental strand, 27970151 - 27970043
Alignment:
Q  225 ggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatt-tctataagatctccatgatagcttatgaaaacaatttatagctta 323  Q
    |||||||||||  |||||||||||||||| ||||||| || | ||||| || || || ||||| ||||||||| ||||||||||||||| ||||| ||||    
T  27970151 ggagagtttatgaaaacaacttatgacatgtctataagctgttttcag-tacttatccataagctctccatgacagcttatgaaaacaagttataactta 27970053  T
Q  324 tatgaaaata 333  Q
    ||||||||||    
T  27970052 tatgaaaata 27970043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 23819197 - 23819070
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| ||| ||||||||   ||||| |||||||||| || ||||  | | |||| || ||||||||||| ||| || |||||||||||||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T
Q  310 caatttatagcttatatgaaaatagttt 337  Q
    ||  ||||| |||||||||||| |||||    
T  23819097 catgttataacttatatgaaaacagttt 23819070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 50799989 - 50800111
Alignment:
Q  207 cacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatga 306  Q
    ||||||||||| ||| |||||||  | ||  |||||||||||||||| ||||||| || | ||||||| ||||| | ||| |||||||||||||||| ||    
T  50799989 cacttgtgagattgtttgggagaactaatgtaaacaacttatgacatgtctataagctgttttcagcttatttcca-aagttctccatgatagcttaaga 50800087  T
Q  307 aaacaatttatagcttatatgaaa 330  Q
    |||||  |||||||||||| ||||    
T  50800088 aaacagcttatagcttataagaaa 50800111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 6987703 - 6987793
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagc 300  Q
    |||||||||||| |||||||| |||| || |||||||||||||| || ||||||||| |||| || ||||| ||||| |||||| ||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagc 6987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 329
Target Start/End: Complemental strand, 11264408 - 11264290
Alignment:
Q  211 tgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaac 310  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||| || ||||||| | |||| || ||||| ||||| |||| | ||| ||||||||||||    
T  11264408 tgtgagactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaac 11264309  T
Q  311 aatttatagcttatatgaa 329  Q
    || ||||| | ||||||||    
T  11264308 aacttataacatatatgaa 11264290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 27123306 - 27123407
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    ||||| |||||||||||||| || ||||| |||| ||||||||||||||||| ||| |||  | | |||| || ||||| ||||| ||||||| ||||||    
T  27123306 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagct 27123405  T
Q  302 ta 303  Q
    ||    
T  27123406 ta 27123407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 927504 - 927457
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  927504 tccatgatagcttatgcaaacaagttatagcttatatgaaaacagttt 927457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 19304663 - 19304557
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagct-aatttctataagatctccatgatagc 300  Q
    |||| |||| ||||||| ||||||||||| ||| ||||||| |||||||||| || |||| || | |||| || |||||| ||||| ||||||||||| |    
T  19304663 ataaacactagtgagacagtgtgggagagctta-cgaaacagcttatgacatttccataagctcttttcaacttaatttccataagttctccatgataac 19304565  T
Q  301 ttatgaaa 308  Q
    ||||||||    
T  19304564 ttatgaaa 19304557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 21157884 - 21157749
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagct 301  Q
    |||||||||||| ||||||| ||| |||| |||  |||||| |||||||||| |  | || || | || |||| ||||| ||||| ||| || ||||||     
T  21157884 ataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagca 21157785  T
Q  302 tatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||  |||||||||| ||||||| |||||    
T  21157784 tatgaaaacatcttatagcttacatgaaaacagttt 21157749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 28407020 - 28406905
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||  || ||||| |||  ||||||||| |||||||||  ||||||||| | ||||| ||||| ||||| ||| | ||||  ||||||||||    
T  28407020 ttgtgagactggttgagagagcttacggaaacaactcatgacatattcataaactatttgcagcttatttccataagctcttcctgatttcttatgaaaa 28406921  T
Q  310 caatttatagcttata 325  Q
    ||| ||| ||||||||    
T  28406920 caacttacagcttata 28406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 30207569 - 30207660
Alignment:
Q  246 tatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||| ||| ||| || | ||||||| ||||| ||||  |||| | | |||||||||||||||| |||||||||||||||||| |||||    
T  30207569 tatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagttt 30207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 336
Target Start/End: Complemental strand, 44320057 - 44319931
Alignment:
Q  210 ttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaa 309  Q
    |||||||||||| |||||||| ||||  |||||| ||||||  |||| || | |||| |||| |||||||  ||||| |||| | |||||||||| ||||    
T  44320057 ttgtgagactgtttgggagagcttatgaaaacaaattatgatgtatccattagctattttcaactaattttcataagttctctaggatagcttatcaaaa 44319958  T
Q  310 caatttatagcttatatgaaaatagtt 336  Q
     |  || ||||||||||||||| ||||    
T  44319957 tagcttgtagcttatatgaaaacagtt 44319931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 46415767 - 46415881
Alignment:
Q  223 tgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagctt 322  Q
    |||||||||||||  ||||||| |||||||| || ||||  | | ||||||||||||   |||| |||| | ||||||||||||||| || ||||| |||    
T  46415767 tgggagagtttatgcaaacaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaagaacttataactt 46415866  T
Q  323 atatgaaaatagttt 337  Q
     |||||||| |||||    
T  46415867 gtatgaaaacagttt 46415881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 18628563 - 18628632
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||| ||||| ||||| |||||| |||| |||||||||||| |||||| ||||||| |||| |||||    
T  18628563 ttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagttt 18628632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 24444060 - 24444019
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  24444060 atagcttatgaaaacaacttatagcttatatgaaaattgttt 24444019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 52504445 - 52504478
Alignment:
Q  305 gaaaacaatttatagcttatatgaaaatagttta 338  Q
    ||||||||||||||||||||||||||||||||||    
T  52504445 gaaaacaatttatagcttatatgaaaatagttta 52504478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 9841094 - 9841050
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaatag 334  Q
    |||| |||||||||||||||||  |||||||||||||||||||||    
T  9841094 tccaggatagcttatgaaaacatcttatagcttatatgaaaatag 9841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 28232658 - 28232530
Alignment:
Q  205 agcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttat 304  Q
    |||||||| |||||||| ||| |||| || | ||||||||||||||| ||| |||||  | | |||| || ||||| | ||| |||| | | |||||| |    
T  28232658 agcacttgcgagactgtttggaagagcttgtggaaacaacttatgacttatttataagttgttttcatcttatttccacaagctctcgaaggtagcttct 28232559  T
Q  305 gaaaacaatttatagcttatatgaaaata 333  Q
    |||| || ||||||||||||||| |||||    
T  28232558 gaaagcagtttatagcttatatggaaata 28232530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 46110253 - 46110201
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagc 320  Q
    ||||||| ||||||||||| |||| || |||||||||||||||| ||||||||    
T  46110253 ttcagcttatttctataagctctcaatcatagcttatgaaaacagtttatagc 46110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 53155289 - 53155245
Alignment:
Q  292 catgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    |||||||||||||||||| | |||||||| |||||||||||||||    
T  53155289 catgatagcttatgaaaatagtttatagcatatatgaaaatagtt 53155245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 53943656 - 53943588
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    ||||||| ||||| ||||| ||||||||| | |||||| |||||| |||||| ||||||||||| ||||    
T  53943656 ttcagcttatttccataagctctccatgacaacttatgtaaacaacttatagtttatatgaaaacagtt 53943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 24091491 - 24091448
Alignment:
Q  290 tccatgatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||| |||| |||||||||||| |||||||||||||||||||||    
T  24091491 tccaggataacttatgaaaacagtttatagcttatatgaaaata 24091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 24160545 - 24160584
Alignment:
Q  298 agcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  24160545 agcttatgaaaacaacttatagcttacatgaaaatagttt 24160584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 41097212 - 41097279
Alignment:
Q  204 aagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattca 271  Q
    ||||||||||||||||||  ||||||| |||| ||||||||| ||||||| || |||| |||| ||||    
T  41097212 aagcacttgtgagactgttcgggagagcttatagaaacaactaatgacatgtccataagctattttca 41097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 42866104 - 42866049
Alignment:
Q  282 ataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||| |||| | |||||||||||||||||| ||||||||||||| |||| |||||    
T  42866104 ataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaacagttt 42866049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 44138762 - 44138727
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||||||||||| |||||||||||||||||||    
T  44138762 atagcttatgaaaacattttatagcttatatgaaaa 44138727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 326
Target Start/End: Complemental strand, 14011284 - 14011226
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatat 326  Q
    ||||||| ||||| ||||| |||||| ||||||||||| ||||| ||| ||||||||||    
T  14011284 ttcagcttatttccataagctctccaagatagcttatgtaaacattttgtagcttatat 14011226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 30338631 - 30338685
Alignment:
Q  288 tctccatgatagcttatgaaaa-caatttatagcttatatgaaaatagtttaact 341  Q
    |||||| || |||||||||||| || ||||||||||||||||||| |||||||||    
T  30338631 tctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaact 30338685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 49219162 - 49219124
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  49219162 gatagtttatgaaaacaacttatagcttatatgaaaata 49219124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 2900392 - 2900327
Alignment:
Q  266 tattcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    ||||||||| |||| |||||  |||| |||||||||| ||||||||  |||||| |||||||||||    
T  2900392 tattcagcttatttttataatctctctatgatagcttgtgaaaacagcttatagtttatatgaaaa 2900327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 6978757 - 6978802
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    |||||||||||||| | ||| ||| |||||||||||||||||||||    
T  6978757 atagcttatgaaaatagtttgtagtttatatgaaaatagtttaact 6978802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 8130192 - 8130159
Alignment:
Q  300 cttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||||||||||| |||||||||||||||||||||    
T  8130192 cttatgaaaacagtttatagcttatatgaaaata 8130159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 11842237 - 11842200
Alignment:
Q  296 atagcttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  11842237 atagtttatgaaaacaacttatagcttatatgaaaata 11842200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 16494845 - 16494882
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttata 325  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  16494845 tctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 42121538 - 42121481
Alignment:
Q  268 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttata 325  Q
    ||||||| ||||| | ||| |||||| ||||||| |||||||||| ||||||||||||    
T  42121538 ttcagcttatttccacaagttctccaagatagctcatgaaaacaacttatagcttata 42121481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 54325077 - 54325126
Alignment:
Q  288 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||||| |||||| |  |||||||||||||||||| |||||    
T  54325077 tctccatgatagcttttgaaaatagcttatagcttatatgaaaacagttt 54325126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 308
Target Start/End: Original strand, 2874608 - 2874684
Alignment:
Q  232 ttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaaa 308  Q
    |||| ||||||||||||||||| || |||| |||| ||| ||| ||||| |||||  ||||  ||||||||||||||    
T  2874608 ttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagcactcctggatagcttatgaaa 2874684  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 8074878 - 8074750
Alignment:
Q  203 taagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagctt 302  Q
    |||||| |||||||||||| || ||||| |||| |||||| || |||| || ||  ||| || | |||| |||| ||| ||||| |||| | ||||||||    
T  8074878 taagcatttgtgagactgtttgagagagcttatagaaacagctaatgaaatgtccgtaatctcttttcatctaacttccataagctctctaagatagctt 8074779  T
Q  303 atgaaaacaatttatagcttatatgaaaa 331  Q
    | |||| ||| ||| ||||||||| ||||    
T  8074778 aggaaagcaacttacagcttatataaaaa 8074750  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 12650307 - 12650359
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatagctta 323  Q
    |||||||||| ||||| |||||| ||||| |||||||||||  ||||||||||    
T  12650307 agctaatttccataagctctccaggataggttatgaaaacagcttatagctta 12650359  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 18628507 - 18628555
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatga 250  Q
    |||| ||||||||||||||| |||||||| ||||  |||||||||||||    
T  18628507 ataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 18630703 - 18630667
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  18630703 gatagcttgtgaaaacaacttatagcttatatgaaaa 18630667  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 20907370 - 20907334
Alignment:
Q  295 gatagcttatgaaaacaatttatagcttatatgaaaa 331  Q
    |||||||| |||||||| |||||||||||||||||||    
T  20907370 gatagcttgtgaaaacagtttatagcttatatgaaaa 20907334  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 21043195 - 21043239
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgaca 252  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgaca 21043239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 24193602 - 24193562
Alignment:
Q  301 ttatgaaaacaatttatagcttatatgaaaatagtttaact 341  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  24193602 ttatggaaacaacttataacttatatgaaaatagtttaact 24193562  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Original strand, 45128363 - 45128395
Alignment:
Q  301 ttatgaaaacaatttatagcttatatgaaaata 333  Q
    |||||||||||||||||||||||||||| ||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaata 45128395  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 49086010 - 49085970
Alignment:
Q  297 tagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||| ||||| ||| ||||||||||||||    
T  49086010 tagcttatgaaaacaacttataacttgtatgaaaatagttt 49085970  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 51197534 - 51197570
Alignment:
Q  301 ttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  51197534 ttatgaaaacaatgtatagcttatatgaatatagttt 51197570  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 55870390 - 55870430
Alignment:
Q  297 tagcttatgaaaacaatttatagcttatatgaaaatagttt 337  Q
    |||||||||||||||| ||||||||||| |||||| |||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagttt 55870430  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 27686 - 27563
Alignment:
Q  208 acttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaactatattcagctaatttctataagatctccatgatagcttatgaa 307  Q
    |||| ||||||||| |||||||| |||| |||| | ||||||||||  ||||||  | | ||||||| ||||| | | | |  ||| ||||| |||||||    
T  27686 acttctgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaa 27587  T
Q  308 aacaatttatagcttatatgaaaa 331  Q
    ||||| |||||| |||||||||||    
T  27586 aacaacttatagtttatatgaaaa 27563  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 3051 - 2998
Alignment:
Q  283 taagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtt 336  Q
    |||| ||||||  ||||||||| ||||||| |||||||||||| ||||||||||    
T  3051 taaggtctccaatatagcttattaaaacaacttatagcttatacgaaaatagtt 2998  T

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Target: scaffold0428 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 4022 - 3962
Alignment:
Q  202 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaa 262  Q
    |||||||||||||||||||| ||| ||||||||| |||||  || ||||||| || |||||    
T  4022 ataagcacttgtgagactgtttggaagagtttatggaaacggctcatgacatgtccataaa 3962  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 17323 - 17275
Alignment:
Q  271 agctaatttctataagatctccatgatagcttatgaaaacaatttatag 319  Q
    |||| ||| ||||||| |||||| |||||||||||||||||| ||||||    
T  17323 agcttattgctataagttctccaagatagcttatgaaaacaacttatag 17275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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