View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3062_low_25 (Length: 285)
Name: NF3062_low_25
Description: NF3062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3062_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 42947027 - 42946768
Alignment:
| Q |
1 |
aataacaaatatcttaaaattacaaaaccaaacggatattcctatccgtacaannnnnnnaatataatgaaaataaaaaacaccgaaaaatttagtcttg |
100 |
Q |
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| T |
42947027 |
aataacaaatatcttaaaattacaaaaccaaagggatattcctatccgtacaatttttttaatattatgaaaataaaaaacaccgaaaaatttagtcttg |
42946928 |
T |
|
| Q |
101 |
ctctgctgtcatatgagctgagctcctacttgtatttgtcattaaagacaagatcttcaaaatctcatatttaattcatagttaagtaggcatatttatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42946927 |
ctctgctgtcatatgagctgagctcctacttgtatttgtcattaaagacaagatcttcaaaatctcatatttaattcatagttaagtaggcatatttatt |
42946828 |
T |
|
| Q |
201 |
attttccaaatcaaaacccctatcacattagcaagacaaataaatgatcaccttgtgaat |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42946827 |
attttccaaatcaaaacccctatcacattagcaagacaaataaatgatcaccttgtgaat |
42946768 |
T |
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