View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3062_low_27 (Length: 278)

Name: NF3062_low_27
Description: NF3062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3062_low_27
NF3062_low_27
[»] chr6 (32 HSPs)
chr6 (3-205)||(29519376-29519578)
chr6 (3-199)||(4508168-4508364)
chr6 (10-200)||(2813089-2813280)
chr6 (3-199)||(23406893-23407090)
chr6 (3-205)||(3717142-3717345)
chr6 (3-205)||(2539548-2539750)
chr6 (7-200)||(5699666-5699860)
chr6 (3-200)||(17264507-17264704)
chr6 (3-191)||(29289499-29289687)
chr6 (7-170)||(7734221-7734384)
chr6 (7-144)||(1945451-1945588)
chr6 (3-198)||(13800894-13801089)
chr6 (3-134)||(14587491-14587622)
chr6 (3-200)||(5638959-5639156)
chr6 (8-151)||(24604275-24604418)
chr6 (40-200)||(21514896-21515056)
chr6 (20-196)||(34528554-34528730)
chr6 (26-183)||(9905234-9905392)
chr6 (64-152)||(32044540-32044628)
chr6 (11-124)||(236899-237012)
chr6 (79-182)||(3365838-3365941)
chr6 (3-200)||(14037830-14038024)
chr6 (79-198)||(16450387-16450506)
chr6 (8-124)||(6704067-6704183)
chr6 (29-112)||(17500989-17501072)
chr6 (83-130)||(8435259-8435306)
chr6 (79-185)||(10310311-10310417)
chr6 (3-112)||(17501173-17501287)
chr6 (79-134)||(4893314-4893369)
chr6 (6-48)||(33738988-33739030)
chr6 (127-200)||(7412971-7413044)
chr6 (23-59)||(32035225-32035261)
[»] chr1 (43 HSPs)
chr1 (15-205)||(41584525-41584715)
chr1 (3-205)||(49677580-49677782)
chr1 (3-205)||(45046710-45046912)
chr1 (3-205)||(7011307-7011509)
chr1 (3-205)||(52744703-52744905)
chr1 (3-200)||(42546064-42546262)
chr1 (3-205)||(33611270-33611472)
chr1 (8-199)||(17000480-17000672)
chr1 (3-205)||(23442835-23443037)
chr1 (15-205)||(45567750-45567940)
chr1 (3-205)||(49786365-49786567)
chr1 (7-200)||(15069707-15069899)
chr1 (3-198)||(18583411-18583606)
chr1 (7-205)||(34006361-34006560)
chr1 (3-205)||(27794928-27795129)
chr1 (3-205)||(28866490-28866692)
chr1 (3-205)||(40907794-40907995)
chr1 (3-195)||(34162591-34162784)
chr1 (3-141)||(44573021-44573158)
chr1 (3-192)||(40650548-40650737)
chr1 (3-119)||(32817557-32817673)
chr1 (3-200)||(3561200-3561397)
chr1 (3-200)||(24472692-24472889)
chr1 (3-205)||(26723348-26723550)
chr1 (3-193)||(38885324-38885500)
chr1 (3-195)||(42928981-42929173)
chr1 (32-200)||(6223616-6223779)
chr1 (43-205)||(25563274-25563436)
chr1 (29-112)||(9445839-9445922)
chr1 (3-69)||(32542490-32542556)
chr1 (79-198)||(45879976-45880095)
chr1 (3-105)||(9446055-9446157)
chr1 (3-124)||(890611-890732)
chr1 (7-124)||(8704459-8704576)
chr1 (5-124)||(26230150-26230269)
chr1 (29-112)||(43318933-43319016)
chr1 (36-112)||(800545-800621)
chr1 (82-124)||(38159001-38159043)
chr1 (36-124)||(11844407-11844495)
chr1 (36-112)||(43319144-43319220)
chr1 (41-112)||(8364143-8364213)
chr1 (158-205)||(44572960-44573007)
chr1 (79-124)||(5284261-5284306)
[»] chr4 (58 HSPs)
chr4 (3-200)||(25491260-25491457)
chr4 (6-205)||(2505891-2506090)
chr4 (3-205)||(38536275-38536478)
chr4 (5-200)||(53893891-53894085)
chr4 (3-205)||(17932997-17933199)
chr4 (3-205)||(40703769-40703971)
chr4 (3-205)||(19835625-19835827)
chr4 (7-205)||(8106502-8106701)
chr4 (10-200)||(41412963-41413153)
chr4 (3-192)||(31582295-31582484)
chr4 (4-205)||(48318924-48319125)
chr4 (3-205)||(25752303-25752506)
chr4 (3-205)||(6003533-6003735)
chr4 (3-205)||(7931762-7931963)
chr4 (3-205)||(34972969-34973171)
chr4 (3-205)||(46440132-46440336)
chr4 (3-205)||(32441915-32442117)
chr4 (3-199)||(55052484-55052681)
chr4 (25-200)||(25538843-25539019)
chr4 (10-200)||(27741978-27742169)
chr4 (3-205)||(41322952-41323154)
chr4 (3-205)||(49397113-49397318)
chr4 (3-205)||(6228673-6228875)
chr4 (78-205)||(54631352-54631479)
chr4 (28-205)||(52089315-52089492)
chr4 (3-179)||(7863546-7863722)
chr4 (8-196)||(14474081-14474268)
chr4 (9-125)||(3703189-3703305)
chr4 (7-142)||(27879657-27879792)
chr4 (79-198)||(47456781-47456900)
chr4 (11-124)||(47784101-47784214)
chr4 (3-97)||(49002822-49002916)
chr4 (3-198)||(37222066-37222260)
chr4 (93-205)||(29822775-29822887)
chr4 (41-125)||(47873953-47874037)
chr4 (3-105)||(25140675-25140777)
chr4 (3-52)||(29822724-29822773)
chr4 (3-144)||(372024-372167)
chr4 (7-170)||(1788103-1788269)
chr4 (27-105)||(25140466-25140544)
chr4 (8-58)||(38416937-38416987)
chr4 (3-124)||(42497817-42497938)
chr4 (3-59)||(23524012-23524068)
chr4 (43-112)||(25140875-25140944)
chr4 (41-112)||(27181474-27181544)
chr4 (79-194)||(48095738-48095853)
chr4 (104-198)||(49001427-49001521)
chr4 (7-112)||(32600949-32601054)
chr4 (79-152)||(46381081-46381154)
chr4 (83-124)||(48629501-48629542)
chr4 (3-42)||(54631485-54631524)
chr4 (46-124)||(37770001-37770079)
chr4 (3-41)||(46381202-46381239)
chr4 (5-38)||(3425647-3425680)
chr4 (79-124)||(20078729-20078774)
chr4 (29-102)||(42660338-42660411)
chr4 (3-72)||(53836211-53836280)
chr4 (79-124)||(55838933-55838978)
[»] chr5 (58 HSPs)
chr5 (3-205)||(38871730-38871932)
chr5 (3-205)||(20891672-20891873)
chr5 (3-205)||(31221199-31221401)
chr5 (3-205)||(31928985-31929186)
chr5 (7-205)||(15799288-15799486)
chr5 (3-200)||(33487669-33487867)
chr5 (3-205)||(39524835-39525037)
chr5 (6-205)||(37183641-37183840)
chr5 (3-205)||(6156790-6156992)
chr5 (3-205)||(7884252-7884455)
chr5 (3-199)||(29862671-29862868)
chr5 (3-205)||(38692643-38692845)
chr5 (6-205)||(15957811-15958010)
chr5 (3-205)||(32841831-32842033)
chr5 (3-199)||(4064585-4064782)
chr5 (5-205)||(28083238-28083438)
chr5 (3-200)||(26095151-26095348)
chr5 (3-195)||(24203554-24203746)
chr5 (4-196)||(27158144-27158336)
chr5 (3-198)||(13908607-13908802)
chr5 (3-193)||(12847502-12847692)
chr5 (24-205)||(14111947-14112126)
chr5 (7-205)||(40619845-40620048)
chr5 (7-205)||(38372372-38372562)
chr5 (8-198)||(6800794-6800984)
chr5 (7-200)||(23269397-23269593)
chr5 (3-200)||(27212768-27212960)
chr5 (3-200)||(40613540-40613737)
chr5 (30-200)||(12464984-12465154)
chr5 (78-205)||(26898663-26898790)
chr5 (7-116)||(26093509-26093618)
chr5 (3-87)||(25747084-25747168)
chr5 (3-98)||(26190265-26190360)
chr5 (1-195)||(11186046-11186239)
chr5 (3-103)||(8738947-8739047)
chr5 (3-105)||(8739148-8739250)
chr5 (3-112)||(16429341-16429450)
chr5 (3-198)||(26622172-26622364)
chr5 (27-112)||(28445162-28445247)
chr5 (3-124)||(41253359-41253480)
chr5 (6-170)||(41639385-41639552)
chr5 (7-103)||(21070429-21070525)
chr5 (3-85)||(1350290-1350372)
chr5 (3-112)||(27494106-27494215)
chr5 (7-195)||(18514865-18515053)
chr5 (21-112)||(8973562-8973653)
chr5 (79-198)||(33901094-33901213)
chr5 (29-112)||(34530300-34530383)
chr5 (3-105)||(16429131-16429233)
chr5 (29-112)||(28445358-28445441)
chr5 (36-112)||(38641026-38641102)
chr5 (21-112)||(27493902-27493993)
chr5 (10-143)||(3435321-3435454)
chr5 (146-195)||(31561646-31561695)
chr5 (27-112)||(34530117-34530201)
chr5 (3-62)||(4027980-4028040)
chr5 (108-200)||(26093620-26093712)
chr5 (36-112)||(38640818-38640894)
[»] chr3 (55 HSPs)
chr3 (3-205)||(3902666-3902868)
chr3 (3-200)||(50716349-50716547)
chr3 (3-200)||(50796300-50796498)
chr3 (3-205)||(3351926-3352128)
chr3 (3-205)||(34821203-34821405)
chr3 (8-205)||(38977608-38977805)
chr3 (3-205)||(52777328-52777530)
chr3 (7-170)||(501036-501199)
chr3 (3-205)||(28873102-28873305)
chr3 (3-205)||(35142171-35142372)
chr3 (16-200)||(47123136-47123320)
chr3 (3-205)||(43472828-43473031)
chr3 (3-205)||(2358482-2358684)
chr3 (3-205)||(39149906-39150108)
chr3 (8-205)||(51258505-51258703)
chr3 (16-200)||(47130502-47130686)
chr3 (7-200)||(30721676-30721862)
chr3 (3-152)||(51540527-51540676)
chr3 (3-205)||(47302117-47302318)
chr3 (8-200)||(49096091-49096284)
chr3 (3-193)||(51492896-51493087)
chr3 (7-205)||(47739793-47739990)
chr3 (3-116)||(33438618-33438731)
chr3 (3-205)||(46622655-46622846)
chr3 (43-198)||(35345776-35345931)
chr3 (81-205)||(3938357-3938481)
chr3 (9-152)||(5127812-5127955)
chr3 (41-144)||(46624855-46624958)
chr3 (3-196)||(40062476-40062669)
chr3 (8-124)||(27143357-27143473)
chr3 (7-170)||(29048444-29048607)
chr3 (3-90)||(3937476-3937563)
chr3 (3-198)||(54229764-54229959)
chr3 (3-124)||(29035895-29036017)
chr3 (6-142)||(14828842-14828978)
chr3 (3-124)||(47769359-47769480)
chr3 (8-101)||(47979970-47980063)
chr3 (3-96)||(45712053-45712146)
chr3 (7-100)||(26053485-26053579)
chr3 (43-112)||(8735530-8735599)
chr3 (43-112)||(9087771-9087840)
chr3 (3-112)||(33842027-33842136)
chr3 (108-200)||(33439383-33439475)
chr3 (69-144)||(4300201-4300276)
chr3 (3-77)||(29035811-29035885)
chr3 (11-120)||(46555445-46555554)
chr3 (79-200)||(51816387-51816508)
chr3 (93-196)||(40062241-40062344)
chr3 (30-93)||(45244514-45244577)
chr3 (7-200)||(50384340-50384534)
chr3 (3-124)||(34010030-34010151)
chr3 (3-99)||(512214-512310)
chr3 (6-124)||(43420071-43420189)
chr3 (79-124)||(26464999-26465044)
chr3 (29-90)||(32025111-32025172)
[»] chr7 (44 HSPs)
chr7 (8-201)||(36468401-36468594)
chr7 (7-192)||(9151897-9152082)
chr7 (3-152)||(28230381-28230530)
chr7 (3-205)||(19225458-19225660)
chr7 (5-199)||(42864968-42865162)
chr7 (3-199)||(42925506-42925703)
chr7 (3-205)||(36629302-36629502)
chr7 (3-205)||(36408468-36408670)
chr7 (3-205)||(33151305-33151501)
chr7 (3-200)||(31985382-31985579)
chr7 (3-200)||(3304623-3304820)
chr7 (3-199)||(1518804-1519000)
chr7 (8-192)||(3936210-3936394)
chr7 (6-205)||(24690193-24690393)
chr7 (20-205)||(19818494-19818679)
chr7 (3-192)||(36946165-36946353)
chr7 (3-205)||(31643138-31643339)
chr7 (3-205)||(8154996-8155198)
chr7 (3-120)||(24042132-24042250)
chr7 (3-205)||(33573903-33574105)
chr7 (3-125)||(37518235-37518357)
chr7 (3-124)||(5278361-5278482)
chr7 (3-205)||(47202591-47202786)
chr7 (7-196)||(6467009-6467198)
chr7 (64-205)||(43737240-43737381)
chr7 (3-200)||(7115135-7115332)
chr7 (79-196)||(37398760-37398877)
chr7 (11-124)||(43185887-43186000)
chr7 (6-101)||(48775710-48775803)
chr7 (94-205)||(26555017-26555128)
chr7 (7-151)||(39581840-39581984)
chr7 (3-134)||(16983673-16983804)
chr7 (14-104)||(8214462-8214552)
chr7 (3-112)||(8214243-8214352)
chr7 (8-101)||(48776175-48776268)
chr7 (3-51)||(6467795-6467843)
chr7 (36-100)||(5730941-5731005)
chr7 (3-120)||(25613058-25613175)
chr7 (36-112)||(16278236-16278312)
chr7 (137-205)||(24042056-24042124)
chr7 (113-205)||(37518123-37518215)
chr7 (3-194)||(48705870-48706061)
chr7 (36-105)||(5731145-5731214)
chr7 (14-59)||(16278423-16278468)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-206)||(141823-142021)
[»] chr8 (45 HSPs)
chr8 (3-205)||(27927801-27928003)
chr8 (7-205)||(3094786-3094984)
chr8 (3-200)||(8885318-8885515)
chr8 (7-205)||(28916876-28917074)
chr8 (3-193)||(44106320-44106510)
chr8 (3-200)||(42280756-42280953)
chr8 (5-205)||(34853427-34853627)
chr8 (3-205)||(36165697-36165900)
chr8 (3-205)||(9073601-9073803)
chr8 (3-205)||(11698176-11698378)
chr8 (3-185)||(40392633-40392815)
chr8 (3-200)||(17119744-17119941)
chr8 (3-205)||(14163917-14164119)
chr8 (24-200)||(40328015-40328191)
chr8 (3-205)||(31519752-31519954)
chr8 (3-200)||(21004486-21004679)
chr8 (3-152)||(4259550-4259697)
chr8 (8-112)||(16310701-16310805)
chr8 (3-97)||(40994889-40994983)
chr8 (26-196)||(36980689-36980859)
chr8 (8-193)||(28423523-28423707)
chr8 (8-112)||(37248660-37248764)
chr8 (8-198)||(6395186-6395376)
chr8 (9-200)||(1076659-1076849)
chr8 (3-193)||(36317889-36318083)
chr8 (49-196)||(34645520-34645667)
chr8 (6-100)||(7982478-7982572)
chr8 (3-112)||(33472168-33472277)
chr8 (7-112)||(33472379-33472484)
chr8 (3-112)||(10833468-10833577)
chr8 (10-196)||(7981618-7981804)
chr8 (5-198)||(10840625-10840817)
chr8 (3-124)||(1374037-1374158)
chr8 (3-112)||(31234471-31234580)
chr8 (43-105)||(9845323-9845385)
chr8 (6-98)||(8621606-8621697)
chr8 (3-86)||(9845490-9845573)
chr8 (27-112)||(24627903-24627988)
chr8 (29-93)||(24627697-24627761)
chr8 (3-143)||(39093605-39093745)
chr8 (30-105)||(31234689-31234764)
chr8 (43-112)||(41530812-41530881)
chr8 (5-59)||(32504309-32504363)
chr8 (43-100)||(7965935-7965992)
chr8 (6-58)||(7966005-7966057)
[»] chr2 (39 HSPs)
chr2 (3-205)||(32187724-32187926)
chr2 (3-200)||(5507516-5507713)
chr2 (3-205)||(15994968-15995170)
chr2 (5-205)||(41510284-41510483)
chr2 (5-205)||(42894476-42894676)
chr2 (7-205)||(41203041-41203239)
chr2 (3-200)||(39447259-39447456)
chr2 (3-152)||(44465635-44465784)
chr2 (3-200)||(33452303-33452500)
chr2 (6-200)||(34517201-34517395)
chr2 (5-153)||(36875084-36875232)
chr2 (7-164)||(8388752-8388909)
chr2 (3-205)||(16750284-16750484)
chr2 (3-200)||(41854764-41854956)
chr2 (11-205)||(25217629-25217825)
chr2 (7-143)||(45153708-45153844)
chr2 (6-153)||(17474706-17474853)
chr2 (7-196)||(19109879-19110068)
chr2 (6-152)||(36948853-36948999)
chr2 (53-205)||(38308687-38308840)
chr2 (8-197)||(35251032-35251221)
chr2 (64-200)||(30763807-30763943)
chr2 (79-198)||(26228239-26228358)
chr2 (23-196)||(33440374-33440546)
chr2 (79-196)||(45293813-45293930)
chr2 (3-112)||(17766777-17766886)
chr2 (3-112)||(41204029-41204138)
chr2 (79-200)||(42478916-42479037)
chr2 (94-205)||(38065432-38065543)
chr2 (12-200)||(32069099-32069286)
chr2 (36-112)||(34519485-34519561)
chr2 (8-100)||(38066633-38066725)
chr2 (20-131)||(34817215-34817326)
chr2 (36-112)||(9847160-9847236)
chr2 (47-141)||(37773735-37773829)
chr2 (36-112)||(9847368-9847444)
chr2 (7-124)||(33833856-33833969)
chr2 (79-120)||(9693521-9693562)
chr2 (8-41)||(45293743-45293776)
[»] scaffold0508 (1 HSPs)
scaffold0508 (3-200)||(3259-3457)
[»] scaffold0137 (1 HSPs)
scaffold0137 (3-197)||(9365-9559)
[»] scaffold0010 (1 HSPs)
scaffold0010 (41-200)||(140620-140779)
[»] scaffold0182 (1 HSPs)
scaffold0182 (32-107)||(23228-23303)
[»] scaffold0564 (1 HSPs)
scaffold0564 (6-200)||(4471-4665)
[»] scaffold0006 (2 HSPs)
scaffold0006 (7-97)||(59938-60028)
scaffold0006 (18-97)||(59472-59551)
[»] scaffold0016 (1 HSPs)
scaffold0016 (29-112)||(205759-205842)
[»] scaffold0466 (1 HSPs)
scaffold0466 (6-124)||(8794-8911)
[»] scaffold0091 (1 HSPs)
scaffold0091 (79-124)||(2004-2049)


Alignment Details
Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 29519376 - 29519578
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29519376 ttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatcatc 29519475  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||| ||||||||||||||||| |||||||  ||||||||| ||||||| || |||||||||| |||  |||||||||||| |||||||||||||||||    
T  29519476 cttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcctcagaaaatcagaaaata 29519575  T
Q  203 ttc 205  Q
    |||    
T  29519576 ttc 29519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 4508364 - 4508168
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| ||||||||||||||||||| |||||    
T  4508364 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactttcatc 4508265  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||  ||||  |||||||||||| ||||||||||||||    
T  4508264 cttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttccgcagaaaatcagaaa 4508168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 2813280 - 2813089
Alignment:
Q  10 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg- 108  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |     
T  2813280 tatataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgt 2813181  T
Q  109 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  2813180 ttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 2813089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 23406893 - 23407090
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  23406893 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 23406992  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||| | |||||||||||| |||| |||||||| |||||||||| ||||||  | ||||||||  ||||  |||||||||||||||||||||||||||    
T  23406993 cttccgtttttgggtcattattacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttccccagaaaatcagaaa 23407090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 3717345 - 3717142
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||| ||| ||||||||| || ||||||||||||    
T  3717345 ttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctcatc 3717246  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||| |||||| ||||||||||||     
T  3717245 cttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccaaaaaatcagaaaaa 3717146  T
Q  202 attc 205  Q
    ||||    
T  3717145 attc 3717142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 2539548 - 2539750
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  2539548 ttcggattatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 2539647  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| | ||| || | ||||| |  ||||||    ||||||||| ||||  |||||||||| ||||||||||||||||| |    
T  2539648 cttctgttttgggtcattgttacctattcgtagttaaaaaccgagttttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaa 2539747  T
Q  203 ttc 205  Q
    |||    
T  2539748 ttc 2539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 5699666 - 5699860
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||| || ||||||||| ||| ||||||||||||| |||||||||||||||    
T  5699666 gattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttc 5699765  T
Q  107 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    || ||||||||||||||||| | |||||| ||||||||| || ||||    ||||||||| ||||  ||||||||||||||||||||||||||||    
T  5699766 tgtttttgggtcattgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaa 5699860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 17264507 - 17264704
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||  | ||||||||| ||| |||||| ||||||||||||||||||    
T  17264507 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatc 17264606  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||| ||||||||||| |||||||| | ||||||   |||||   | ||||||||  ||||  ||||||||||||||||||||||||||||    
T  17264607 cttctgttttgcgtcattgttacctgttcttagttaaaaattgagtttttgggctacttgatgggattgctccgaaacttccccagaaaatcagaaaa 17264704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 29289687 - 29289499
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||| | ||||| ||||||||||  ||  | |||||||||| ||||||||| |||||||||| ||||    
T  29289687 ttcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatc 29289588  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaa 191  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||||  | |||||||||| |||  |||||||||||||||||||    
T  29289587 cttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttccccagaaa 29289499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 7734384 - 7734221
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||     
T  7734384 gattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatcatccttt 7734285  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagatt 170  Q
    |||||||| |||||||||  |||||||  |||||||||||||||||  | ||||||||||||||    
T  7734284 tgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 1945588 - 1945451
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  1945588 gattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttc 1945489  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatc 144  Q
    ||||||||| ||||||||| |||| ||| |||||||||    
T  1945488 tgttttgggacattgttacctgtttttattcaaaaatc 1945451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 13801089 - 13800894
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||  ||| |||||||||| | |||||||||||||||||||||||||    
T  13801089 ttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctcatc 13800990  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
     || ||||||||||||||||||  |||||||| ||||||||| | ||||  |  ||||||||| ||||  |||||||||| || ||||||||||||    
T  13800989 attatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctccgaaacttgcctagaaaatcagaa 13800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 14587622 - 14587491
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| |||    
T  14587622 ttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatc 14587523  T
Q  103 cttctgttttgggtcattgttacatgttctta 134  Q
    ||| ||||||||||||||||||||||||||||    
T  14587522 cttatgttttgggtcattgttacatgttctta 14587491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 5638959 - 5639156
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||  || | |||| || ||| ||||||||||||| ||||||| |||    
T  5638959 ttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatc 5639058  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||| ||||||| ||||||||||| |||||||| ||||||||| ||||| |  | |||||| |||||||  || ||||||| |||| ||||||||||||    
T  5639059 cttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactttcccaaaaaatcagaaaa 5639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 24604418 - 24604275
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||   || |||||||||  || ||||||||||||||||||| ||||||||||    
T  24604418 attatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatccttct 24604319  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggtttt 151  Q
    |||||| ||||||||||| |||||||| ||||||||| ||||||    
T  24604318 gttttgagtcattgttacctgttcttagtcaaaaatcgggtttt 24604275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 21515056 - 21514896
Alignment:
Q  40 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 139  Q
    ||||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||    
T  21515056 ctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtcaa 21514957  T
Q  140 aaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| | |||||    ||||||||| ||||  ||||||||||||||| ||||| ||||||    
T  21514956 aaatcggattttcggactacttgatcggattgctccgaaacttccccataaaattagaaaa 21514896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 34528554 - 34528730
Alignment:
Q  20 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 119  Q
    |||||||||||||||||||| | ||||||||||||||||| ||  |||||| | ||| |||||||||||| ||||||||||| |||||||||||||||||    
T  34528554 gaactgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcat 34528653  T
Q  120 tgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    | |||  |||||||| ||||||||| |||||||    ||||||||| ||||  ||| |||||||| || ||||||||    
T  34528654 tattagctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcctcataaaatcag 34528730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 9905234 - 9905392
Alignment:
Q  26 tatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||| |||  ||||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  9905234 tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagtcattgtta 9905333  T
Q  125 catgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 183  Q
    |   |||||| ||||||||| |||||||  | ||||||||| ||||  |||||||||||    
T  9905334 ccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 32044540 - 32044628
Alignment:
Q  64 gtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||| |||||||||||||||||    
T  32044540 gtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttc 32044628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 236899 - 237012
Alignment:
Q  11 atataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtt 110  Q
    ||||||| |||||| |||||||||||||| | ||||||||||||||||| |   |||||||| |||  |||||||||||||||||||||||| |||| ||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatt 236998  T
Q  111 ttgggtcattgtta 124  Q
    || |||||||||||    
T  236999 ttaggtcattgtta 237012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 3365838 - 3365941
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  |||||  ||||||||||| |||||||| | |||||||||| |||  ||||||    
T  3365838 atattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggttttcaggttacttgatcatattgctccgaa 3365937  T
Q  179 actt 182  Q
    ||||    
T  3365938 actt 3365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 14038024 - 14037830
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||| |||||||||||||||||||||||| |   | ||||||||||| ||   |  ||||  ||  |||||||||||| ||||   ||||    
T  14038024 ttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaac---catc 14037928  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||| |||||||||||  |||||||| |||||||||  ||||||  | ||||||||||||||  ||| |||| |||| | ||||| ||||||    
T  14037927 cttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatcccaataaaattagaaaa 14037830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 16450387 - 16450506
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||| ||||||| || |||||| |||||||||||  |||||||| ||||||||  ||||||   | ||||||||||||||  | ||||    
T  16450387 atattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttggtttttgggctacttgatcagattgcttcgaa 16450486  T
Q  179 acttccccagaaaatcagaa 198  Q
    |||| || ||||||||||||    
T  16450487 acttacctagaaaatcagaa 16450506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 6704183 - 6704067
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||||||||||| | ||||||||||| |||  | ||||||||||| ||    | |||| ||| ||||||||||||||||||||||||| |||     
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  108 gttttgggtcattgtta 124  Q
     |||| |||||||||||    
T  6704083 attttaggtcattgtta 6704067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 17500989 - 17501072
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| || ||| |||||||||||||||||||| ||||||||| ||| | ||||||||||||||| | |||||||| ||||||    
T  17500989 cagcaccaaatctgaacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaattttcatccttgtgtttt 17501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 8435259 - 8435306
Alignment:
Q  83 taatcttcctaactctcatccttctgttttgggtcattgttacatgtt 130  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||    
T  8435259 taatcttcctaactatcattcttctgttttaggtcattgttacatgtt 8435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 10310417 - 10310311
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||| |||| ||||| |||| ||| ||||| |  |||||| | |||||||||   |||| | | |||||| ||||||| |||||||    
T  10310417 atattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcagattgttccgaa 10310318  T
Q  179 acttccc 185  Q
    |||||||    
T  10310317 acttccc 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 17501173 - 17501287
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgt-----cattttatggagaatattaatcttcctaactc 97  Q
    |||||||||  ||||||| || | ||||| || |||||| ||||||||||||||||| || ||     ||||||| ||| |||||||||||||||| ||     
T  17501173 ttcggattacgtaatccggacagcatcaggaccaattctgaacatgtttgtaacatggatagtatagtcattttaaggacaatattaatcttcctagctt 17501272  T
Q  98 tcatccttctgtttt 112  Q
    |||||||| ||||||    
T  17501273 tcatccttgtgtttt 17501287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 4893314 - 4893369
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttctta 134  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||||  ||||||||    
T  4893314 atattaatcttcctaattctcatccttatgttttaagtcattgttagttgttctta 4893369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 33739030 - 33738988
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatg 48  Q
    |||||||||| |||||||||||| ||||| |||||||||||||    
T  33739030 ggattatatagtccgaactgtattagcacgaattctaaacatg 33738988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 7412971 - 7413044
Alignment:
Q  127 tgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||  ||||||||||||||||    || |||||| ||||  |||||||||||| |||||||||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttccacagaaaatcagaaaa 7413044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 32035225 - 32035261
Alignment:
Q  23 ctgtatcagcacaaattctaaacatgtttgtaacatg 59  Q
    |||||||||||||||| |||||||| |||||||||||    
T  32035225 ctgtatcagcacaaatcctaaacatatttgtaacatg 32035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 41584715 - 41584525
Alignment:
Q  15 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgg 41584616  T
Q  115 gtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||||||||| ||||||||| |||||||  | ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  41584615 gtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattc 41584525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 49677580 - 49677782
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||||||||||||||||||     
T  49677580 ttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactctcatt 49677679  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||||||||||||||||||||||||| | ||||||| ||||||||   ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  49677680 cttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 49677779  T
Q  203 ttc 205  Q
    |||    
T  49677780 ttc 49677782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 45046912 - 45046710
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | ||| |||||||||||||||||||||||||    
T  45046912 ttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaactctcatc 45046813  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| | ||||| | |||||||  | ||||||||| ||||  |||||||||| |||| |||||||||||| |    
T  45046812 cttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttgcccaaaaaatcagaaaaaa 45046713  T
Q  203 ttc 205  Q
    |||    
T  45046712 ttc 45046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 7011307 - 7011509
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||| ||| ||||||||||||| |||||||||||    
T  7011307 ttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctcatc 7011406  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||| ||||||||| || |||| ||| ||||||||| |||||||  | ||||||||| ||||  |||||||| ||||||||||||||||||| |    
T  7011407 cttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacatccccagaaaatcagaaaaaa 7011506  T
Q  203 ttc 205  Q
    |||    
T  7011507 ttc 7011509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 52744905 - 52744703
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||| | | || ||||||||||||||||||||||    
T  52744905 ttcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatc 52744806  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||    ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  52744805 cttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 52744706  T
Q  203 ttc 205  Q
    |||    
T  52744705 ttc 52744703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 42546064 - 42546262
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||| | ||||||||||||    
T  42546064 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctcatc 42546163  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcagg-ttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||||||||  |||||||| | ||||| | || |||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  42546164 cttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 42546262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 33611472 - 33611270
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| |||||| |||||||||| ||| |||    
T  33611472 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatc 33611373  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  33611372 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 33611273  T
Q  203 ttc 205  Q
    |||    
T  33611272 ttc 33611270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 17000480 - 17000672
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||     
T  17000480 attatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcc 17000579  T
Q  108 g-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    | ||||||||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  |||||||||||||||||||||||||||    
T  17000580 gtttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 17000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 23442835 - 23443037
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |  | ||||||| ||| ||||||||||||||||||||| |||    
T  23442835 ttcggattatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatc 23442934  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| |||||||    ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  23442935 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 23443034  T
Q  203 ttc 205  Q
    |||    
T  23443035 ttc 23443037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 45567940 - 45567750
Alignment:
Q  15 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgg 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| |||||||||||| ||||||||||||| | ||||||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgttttgg 45567841  T
Q  115 gtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||| |||||||| | ||||||| |||||||    ||||||||| ||||  ||||||||||||||| |||||||||||| ||||    
T  45567840 gtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccaaaaaatcagaaaaaattc 45567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 49786365 - 49786567
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||| || | ||||||||||| ||||||||||||||||||||| |||    
T  49786365 ttcggattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatc 49786464  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||||||||| ||||||||||| ||| |||||||||| ||||||    ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  49786465 cttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttttcggcctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 49786564  T
Q  203 ttc 205  Q
    |||    
T  49786565 ttc 49786567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 15069899 - 15069707
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  || |||||||||||| |||||| |||||||||    
T  15069899 gattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaactttcatccttc 15069800  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||| |||||||||| |||||||| | ||||||| | ||||| || ||||||||| ||||  | |||||||| |||||||||||||||||    
T  15069799 tgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgct-cgaaactttcccagaaaatcagaaaa 15069707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 18583606 - 18583411
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||| ||||||||| |||    
T  18583606 ttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatc 18583507  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| ||||||||||    
T  18583506 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaa 18583411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 34006361 - 34006560
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| || ||||| |||||||||| |||| |||||||||||||| || ||||||||| |||  ||||||||||||||||||||||||||||    
T  34006361 gattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcctt 34006460  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    || ||||| ||||||| ||| |||||||| |||||||| ||||||||  | ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  34006461 ctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 34006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 27794928 - 27795129
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||||||  || ||||||||||||| ||||||||||||||||||| ||||     
T  27794928 ttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatcat- 27795026  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| ||||| ||| ||||||   | ||||||||| ||||  |||||||||||| ||||||||||||||| |    
T  27795027 cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttccacagaaaatcagaaaaaa 27795126  T
Q  203 ttc 205  Q
    |||    
T  27795127 ttc 27795129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 28866692 - 28866490
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || | ||||||||||| | | ||||||||| |||||||||||    
T  28866692 ttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttcataactctcatc 28866593  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||| ||||||||| |||||||| ||||||||| |  ||||    ||||||||| ||||  ||||||||||||||| ||||| |||||| |    
T  28866592 cttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttccccaaaaaattagaaaaaa 28866493  T
Q  203 ttc 205  Q
    |||    
T  28866492 ttc 28866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 40907995 - 40907794
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||  ||||||||  || |||||||||||||||||||| ||||    
T  40907995 ttcggattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactcccatc 40907897  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
     ||||| |||||||||||||||| |||| ||| | ||||||| |||||||    ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  40907896 tttctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 40907797  T
Q  203 ttc 205  Q
    |||    
T  40907796 ttc 40907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 34162784 - 34162591
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||| ||| ||||||||||||||||||||  |||    
T  34162784 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatc 34162685  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
    |||| | |||||||||||||||||||||||||| |||||||||   |||||  | ||||||||  | ||  |||||||||||||||||||||||    
T  34162684 cttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttccccagaaaatca 34162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 44573158 - 44573021
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||    
T  44573158 ttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaactctcatc 44573060  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaa 141  Q
    |||||||||||| |||||||||| |||||||| ||||||    
T  44573059 cttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 40650737 - 40650548
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||||||    
T  40650737 ttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatc 40650638  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    |||||  |||||||||||||||| |||||||| | ||||| |  ||||||  | ||||||||| ||||  |||||||||||| |||||||    
T  40650637 cttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcctcagaaaa 40650548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 32817673 - 32817557
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||    
T  32817673 ttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatc 32817574  T
Q  103 cttctgttttgggtcat 119  Q
    |||||||||||||||||    
T  32817573 cttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 3561397 - 3561200
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||  || || |||||| ||| | |||||||||| ||||||||||||    
T  3561397 ttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcatc 3561298  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||||||||| |||||||||||  |||||||| ||||||||| | | ||   | ||||||||||||||  |||||||||| |||| ||||||||||||    
T  3561297 attctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctccgaaactttcccataaaatcagaaaa 3561200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 24472889 - 24472692
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||| |||||||||| ||||     
T  24472889 ttcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcatt 24472790  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||| |||||||||||  |||||||| |||||||||   |||    |  |||||||  ||||  ||||||||||||||||||||||||||||    
T  24472789 cttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttccccagaaaatcagaaaa 24472692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 26723550 - 26723348
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatgg-agaatattaatcttcctaactctcat 101  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| || ||||||||| || | ||||||||||||||| ||||| ||    
T  26723550 ttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatattaatcttccttactctgat 26723452  T
Q  102 ccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    | |||| ||||| ||||||||||  |||||||| | ||||||| ||||||     ||||||||| ||||  ||||||||||||||||||||||||||||     
T  26723451 cattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaa 26723352  T
Q  202 attc 205  Q
    ||||    
T  26723351 attc 26723348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 38885324 - 38885500
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||              ||||||||| ||| ||||||||| |||||||||||||||    
T  38885324 ttcggattatataatccgaactgtatcagcacaaattctaaacatgt--------------gtcattttaaggacaatattaattttcctaactctcatc 38885409  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
    ||||||||||||||||||||||| |||||||| | ||||||  |||||||  | ||||||||| ||||  |||||||||| |||| |||||    
T  38885410 cttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttgatcggattgctccgaaactttcccaaaaaat 38885500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 195
Target Start/End: Original strand, 42928981 - 42929173
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||| |||||||||| ||||||  | | ||||||| ||||||| |||| ||||||| |||  |||||||| ||| ||||||||||     
T  42928981 ttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcatt 42929080  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
    ||| |||||| | |||||||||  |||||| | ||||||||| ||||||| || ||||||||||||||  |||||||||| |||| |||||||    
T  42929081 cttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctccgaaactttcccataaaatca 42929173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 200
Target Start/End: Complemental strand, 6223779 - 6223616
Alignment:
Q  32 cacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttc 131  Q
    |||||||| |||| |||||||||||||| || ||||||||| ||| |||| |     |||||||| |||| |||||||||| ||||||||||||||||||    
T  6223779 cacaaattttaaatatgtttgtaacatggatagtcattttagggacaataat-----tcctaactatcattcttctgttttaggtcattgttacatgttc 6223685  T
Q  132 ttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||| ||||||||| |||||||  | ||||||||| ||||  || ||||||| |||||||||||||||||    
T  6223684 ttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcagaaaa 6223616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 25563436 - 25563274
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaa 142  Q
    ||||||||||||| ||| || ||||||||| ||| |||||||| |||| |||| ||||||||| |||||| |||||||||||  |||| ||| |||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaa 25563337  T
Q  143 tcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    || | | ||| || ||||||||| ||||  ||||||||||||| |||||||||| ||| ||||    
T  25563336 tccgatattcgagctacttgatcggattgctccgaaacttcccaagaaaatcaggaaaaattc 25563274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 9445922 - 9445839
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| |||||||||||| |||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatccttgtgtttt 9445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 32542490 - 32542556
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcatt 69  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||    
T  32542490 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcatt 32542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 45880095 - 45879976
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  | || ||| |||||||||  |||||   |||||||||||| |||  ||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaa 45879996  T
Q  179 acttccccagaaaatcagaa 198  Q
    ||||  ||||||||| ||||    
T  45879995 acttatccagaaaattagaa 45879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 9446157 - 9446055
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||||||||| ||| |||||| |||||| ||||||||| ||||||| || ||||||||| ||| ||||||||||||| || || |||||    
T  9446157 ttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttcatc 9446058  T
Q  103 ctt 105  Q
    |||    
T  9446057 ctt 9446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 890611 - 890732
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||| ||   || |||| ||| ||||||||||||| |||||  |||     
T  890611 ttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcataacttccatt 890710  T
Q  103 cttctgttttgggtcattgtta 124  Q
     || |||||| |||||||||||    
T  890711 attttgttttaggtcattgtta 890732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 8704576 - 8704459
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||||| ||| | |||| |||||| || || |||| || ||||||||| |||   ||||||||||||||||| |||| || |    
T  8704576 gattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaaggatcttattaatcttcctaactatcattctcc 8704477  T
Q  107 tgttttgggtcattgtta 124  Q
    | |||| |||||||||||    
T  8704476 tattttaggtcattgtta 8704459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 26230150 - 26230269
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    |||||||||||| ||||||||||||| ||||| |||||| | || |||||||||| || | || |||| |||  |||||||||||| || ||||||||||    
T  26230150 cggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctcatcct 26230249  T
Q  105 tctgttttgggtcattgtta 124  Q
    ||| |||  | |||||||||    
T  26230250 tctatttcagttcattgtta 26230269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 43319016 - 43318933
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| |||||| ||||||||||||||||  || ||||||||| | | ||||||||||||||||||| |||||||| ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatccttgtgtttt 43318933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 800621 - 800545
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||| ||||||||||||| |||| || ||||||||  ||| ||||||||| |||||||||||||||||| ||||||    
T  800621 aattcaaaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatccttgtgtttt 800545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 38159043 - 38159001
Alignment:
Q  82 ttaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38159043 ttaatcttcctaactctcatccttctgttttaggtcattgtta 38159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 11844407 - 11844495
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||| |||||| || ||||||| ||  |||||||| |||| |||||||||||||| ||| ||| ||| ||||||| |||||||||||    
T  11844407 aattctgaacatgcttataacatgtataatcattttaaggagcatattaatcttccttactatcaccctcctgttttaggtcattgtta 11844495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 43319220 - 43319144
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||| || || |||||||| ||||||    
T  43319220 aattctgaacatgtttgtaacattgatagtcattttaaggataatattaatcttcatagctttcatccttgtgtttt 43319144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 8364143 - 8364213
Alignment:
Q  41 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||||| || |||||||||   | |||||||||| ||||||||||||||||| ||||||    
T  8364143 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgtttt 8364213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 44573007 - 44572960
Alignment:
Q  158 acttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  44573007 acttgatcagattgctccgaaacttccccataaaatcagaaaaaattc 44572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 5284306 - 5284261
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||||||||||||||  ||||| ||||||||| |||||||||||    
T  5284306 atattaatcttcctaaccttcatcattctgttttaggtcattgtta 5284261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 25491457 - 25491260
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  25491457 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatc 25491358  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||     ||||||||| ||||  ||| ||| ||||||||||||||||||||    
T  25491357 cttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttccccagaaaatcagaaaa 25491260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 2506090 - 2505891
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| ||||||||||    
T  2506090 ggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatcctt 2505991  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||  | ||||||||| ||||  |||||||||| | ||||||| ||||||| ||||    
T  2505990 ctgttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctacttgatcggattgctccgaaactttctcagaaaagcagaaaacattc 2505891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 38536275 - 38536478
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||     
T  38536275 ttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatt 38536374  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
     ||||| |||| ||||||||||||||||||||| |||||||||| ||||||| | ||||||||| |||| |||| |||||| |||||||||||||||||     
T  38536375 attctgtttttaggtcattgttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactttcccagaaaatcagaaaaa 38536474  T
Q  202 attc 205  Q
    ||||    
T  38536475 attc 38536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 53894085 - 53893891
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||||||| ||||  || ||||||| || ||||||||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactt-ccgagaaaatcagaaaa 53893891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 17933199 - 17932997
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||| ||| | |||||||||||||||||||||||    
T  17933199 ttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctcatc 17933100  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| | ||||||||| ||||||    |||||||| ||||  ||||||||||| |||||||||||||||| |    
T  17933099 cttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttctccagaaaatcagaaaaaa 17933000  T
Q  203 ttc 205  Q
    |||    
T  17932999 ttc 17932997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 40703769 - 40703971
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  40703769 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 40703868  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||  | |||||| ||||||||| ||||||     ||||||||| ||||  |  ||||||||||||||||||||||||| |    
T  40703869 cttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaaacttccccagaaaatcagaaaaaa 40703968  T
Q  203 ttc 205  Q
    |||    
T  40703969 ttc 40703971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 19835625 - 19835827
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | |||||||||||||||||||||||||    
T  19835625 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatc 19835724  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
     |||||||||| ||||||||||| |||| ||| |||||| || |||||||    ||||||||| ||||  |||||||||| ||||||||||||||||| |    
T  19835725 tttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaa 19835824  T
Q  203 ttc 205  Q
    |||    
T  19835825 ttc 19835827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 8106502 - 8106701
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  ||  ||| |||||||| |||||||||||||||    
T  8106502 gattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctttctaactctcatcctt 8106601  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||   | ||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  8106602 ctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttccccaaaaaatcagaaaaaattc 8106701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 41413153 - 41412963
Alignment:
Q  10 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 109  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||| | | ||||||||||||||||||||| ||| || |||    
T  41413153 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgt 41413054  T
Q  110 tttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||  | |||||||||||||| ||| |||||||||||| ||||||||||||    
T  41413053 tttaggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttccccaaaaaatcagaaaa 41412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 31582484 - 31582295
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||| | ||| ||||| |||||||||||||||    
T  31582484 ttcggattatataatctgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatc 31582385  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||  | || |||||| ||||  |||||||||| |||||||||    
T  31582384 cttctgttttgggtcattgttacatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctccgaaacttgcccagaaaa 31582295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 48319125 - 48318924
Alignment:
Q  4 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||||||||||||||||||||||||    
T  48319125 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcc 48319026  T
Q  104 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatat 203  Q
    |||||||||||||||||||||  | |||||| | ||||||| | |||||    ||||||||| ||||  | ||||| |||||||||||||||||||| ||    
T  48319025 ttctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgcttcgaaatttccccagaaaatcagaaaaaat 48318926  T
Q  204 tc 205  Q
    ||    
T  48318925 tc 48318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 25752506 - 25752303
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||| ||| ||||| |||||||||| ||||||||    
T  25752506 ttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatc 25752407  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
     || || |||||||| |||||||| |||||||| ||||||||| |||||||  | ||||||||||||||  ||||||||||||||||||||||||||||     
T  25752406 tttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttccccagaaaatcagaaaag 25752307  T
Q  202 attc 205  Q
    ||||    
T  25752306 attc 25752303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 6003735 - 6003533
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| ||| ||| ||| || ||||||||| ||| ||||||||||||||||||||| |||    
T  6003735 ttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatc 6003636  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||  | ||||||||  ||||  || ||||||| |||| |||||||||||| |    
T  6003635 cttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactttcccaaaaaatcagaaaaaa 6003536  T
Q  203 ttc 205  Q
    |||    
T  6003535 ttc 6003533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 7931762 - 7931963
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| || || |||||| ||| |||||||||||||||||||||||||    
T  7931762 ttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactctcatc 7931861  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    | |||||||||||||||||||||||||| ||  |||||||||  ||||||    |||||| || ||||  | |||||||| ||||||||||||||||| |    
T  7931862 c-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgcttcgaaactttcccagaaaatcagaaaaaa 7931960  T
Q  203 ttc 205  Q
    |||    
T  7931961 ttc 7931963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 34972969 - 34973171
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  34972969 ttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 34973068  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||| |||||||||||  |||||||| ||||||||| ||||||||   ||||||||| ||||  || |||||||||| | ||||| |||||| |    
T  34973069 cttttgttttaggtcattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccctataaaattagaaaaaa 34973168  T
Q  203 ttc 205  Q
    |||    
T  34973169 ttc 34973171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 46440336 - 46440132
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||  |||||||| ||| |||| |||||||| |||||||||||    
T  46440336 ttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatactaatcttcataactctcatc 46440237  T
Q  103 cttctgttttgggtcattgttac--atgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| |||| | ||||||||||   |||||||| ||||||||| | |||||    ||||||||| ||||  ||||||||||||||||||||||||||||    
T  46440236 cttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaa 46440137  T
Q  201 tattc 205  Q
     ||||    
T  46440136 aattc 46440132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 32441915 - 32442117
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||| ||||||| ||||||| ||  ||||||| ||||||||||| ||   |||||||  || ||||||||||||||||||||| |||    
T  32441915 ttcggattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatc 32442014  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| |||||||||  ||||||  | ||||||||| ||||  || ||||||||||||||||||||||||| |    
T  32442015 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaa 32442114  T
Q  203 ttc 205  Q
    |||    
T  32442115 ttc 32442117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 55052681 - 55052484
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||| ||| ||||||||||||||| |||||    
T  55052681 ttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatc 55052582  T
Q  103 ctt-ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    ||| |  |||| |||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  ||||||||||||| |||||||||||||    
T  55052581 cttccattttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccctagaaaatcagaaa 55052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 25539019 - 25538843
Alignment:
Q  25 gtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg-ttttgggtcattgtt 123  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  124 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    || | |||||| ||||||||  |||||||| | ||||||||  ||||  |||||||| |||||||||||||||||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatttctccgaaacatccccagaaaatcagaaaa 25538843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 27742169 - 27741978
Alignment:
Q  10 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttctg 108  Q
    ||||||||  ||| |||||||||||||||| |||||||||||||||||| ||| || |||||| |||  |||||||||||||||||||||||||||||||    
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  109 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| ||||||| ||||| |||||| ||||||||| |||||||  | ||||| ||| ||||  |||||||| ||||| |||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctccgaaacatcccccgaaaatcagaaaa 27741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 41323154 - 41322952
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||| ||   ||| |||||| |||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||    
T  41323154 ttcggattatatcattttaaccgtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatc 41323055  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||| |||||||||||  |||||||| | ||||||   ||||||   |||||||||| ||||  ||||||| ||||||||||||||| |||| |    
T  41323054 cttttgtttttggtcattgttaattgttcttagttaaaaattgagttttcggcatacttgatcggattgctccgaaagttccccagaaaatcataaaaaa 41322955  T
Q  203 ttc 205  Q
    |||    
T  41322954 ttc 41322952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 49397113 - 49397318
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcat----tttatggagaatattaatcttcctaactct 98  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| ||   |||    |||| ||| |||||||||||||||||||||    
T  49397113 ttcggattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactct 49397212  T
Q  99 catccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
     |||||| ||||||| |||||||||||||||||||| ||||||||| ||||||| || ||||||||| ||||  || ||||||| |||| ||||||||||    
T  49397213 tatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaactt-cccaaaaaatcagaa 49397311  T
Q  199 aatattc 205  Q
    || ||||    
T  49397312 aaaattc 49397318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 6228875 - 6228673
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||| | ||||| ||||| || || |||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  6228875 ttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 6228776  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| ||||||||  |||||||  | || |||||| ||||  ||  ||||||||| | |||||||||||| |    
T  6228775 cttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttcccaaaaaaatcagaaaaaa 6228676  T
Q  203 ttc 205  Q
    |||    
T  6228675 ttc 6228673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 54631479 - 54631352
Alignment:
Q  78 aatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccga 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    ||||||||| ||||  ||| |    
T  54631479 aatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaa 54631380  T
Q  178 aacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||||||||||||||| ||||    
T  54631379 aacttccccagaaaatcagaaaaaattc 54631352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 52089315 - 52089492
Alignment:
Q  28 tcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacat 127  Q
    |||||||||||  ||||||||||||||||||| || ||||||||  ||| ||||||||| ||||||||| |||| |||||| |||||||||||||||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  128 gttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||| ||||||||| ||||||     ||||||||| ||||  | | |||||||||||||||||||||||| ||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttccccagaaaatcagaaaaaattc 52089492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 7863546 - 7863722
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |   |||||||| ||| ||||||||| ||||||||| | |||    
T  7863546 ttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaacttttatc 7863645  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaa 179  Q
    |||||||||| |||||||| ||  |||||||| | ||||||  |||||||  | ||||| ||||||||  |||||||    
T  7863646 cttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 14474268 - 14474081
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||| ||| ||||||| |||||||| | ||||||||||||||||| || ||| ||| | | | |||||||||||||||||| |||||||||||    
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaa-gaacaatattaatcttcctaaccctcatccttct 14474170  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
     |||| |||||||||||| |||||||  |||||||||  ||||||||| ||||||||| ||||  ||||||||||   |||||||||||    
T  14474169 attttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctccgaaactttttcagaaaatcag 14474081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 3703305 - 3703189
Alignment:
Q  9 ttatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg 108  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||  || ||||||||| | ||||||||||||||| |||||||||||||||||    
T  3703305 ttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttctg 3703206  T
Q  109 ttttgggtcattgttac 125  Q
    |||| ||||| ||||||    
T  3703205 ttttaggtcaatgttac 3703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 27879657 - 27879792
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||  |||||||| ||||||||||||||  ||     
T  27879657 gattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctcataattt 27879756  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaa 142  Q
    |||||| | |||||||||  ||||| || |||||||    
T  27879757 tgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 47456781 - 47456900
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||| || |||||| ||||||||  |||||||  | ||||||||||||||  ||||||    
T  47456781 atattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcagattgctccgaa 47456880  T
Q  179 acttccccagaaaatcagaa 198  Q
    ||||||||||||||||||||    
T  47456881 acttccccagaaaatcagaa 47456900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 47784101 - 47784214
Alignment:
Q  11 atataatccgaactgtatcagcacaaattctaaaca-tgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 109  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||| || ||||||||| ||| |||||||||| ||||||||||||| | |||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcattcatctgt 47784199  T
Q  110 tttgggtcattgtta 124  Q
    |||| ||||||||||    
T  47784200 tttgagtcattgtta 47784214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 97  Q
    |||| |||||||| ||| |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 37222066 - 37222260
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaa-tcttcctaactctcat 101  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||   || |||| |||  ||||||| ||||| ||| ||||||    
T  37222066 ttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaa-tctcat 37222164  T
Q  102 ccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    | |||||||||||||||||||||  |||||||| | ||||||  |||| ||  | ||| ||||||||||  ||||||||||   |||||||||||||    
T  37222165 cattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtac-tgatcagattgctccgaaacttttacagaaaatcagaa 37222260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 29822775 - 29822887
Alignment:
Q  93 aactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||| ||||  ||  |||||| |||||| ||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaa 29822874  T
Q  193 tcagaaaatattc 205  Q
    |||||||| ||||    
T  29822875 tcagaaaaaattc 29822887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  41 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttac 125  Q
    ||||||||||| ||||||| || ||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 25140777 - 25140675
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||||||||| | |||||||| |||||| ||||||||||||||||| || ||||||||  ||| |||||||||||||||| || |||||    
T  25140777 ttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttcctagctttcatc 25140678  T
Q  103 ctt 105  Q
    |||    
T  25140677 ctt 25140675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 29822724 - 29822773
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29822724 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 372024 - 372167
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatct--tcctaactctca 100  Q
    |||||||||||| |||  ||||||||||||||||||| | | ||||||| ||||||| || |||||||||  ||  |||||||| |  || ||| | |||    
T  372024 ttcggattatatcatctcaactgtatcagcacaaattatgagcatgtttataacatggatagtcattttaaagaccatattaatattctcataattttca 372123  T
Q  101 tccttctgttttgggtcattgttacatgttcttactcaaaaatc 144  Q
    ||||||||||||||||||||||||  | |||||| |||||||||    
T  372124 tccttctgttttgggtcattgttagttcttcttagtcaaaaatc 372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 170
Target Start/End: Original strand, 1788103 - 1788269
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||| ||||||||||||||  ||| | |  |||||  ||||||||||   || ||||  ||  |||||||||||| |||||||||| ||||    
T  1788103 gattatataatccaaactgtatcagcacggattatgagtatgttgttaacatgaataaccagtttaatgatcatattaatcttcataactctcattcttc 1788202  T
Q  107 tgttttgggtcattgttacatgttcttact---caaaaatcaggttttcaagatacttgatcagatt 170  Q
    |||||| |||||||||||| |||||||| |    |||||||  ||||||  ||||||||||||||||    
T  1788203 tgttttaggtcattgttacttgttcttagtaaaaaaaaatctagttttcgggatacttgatcagatt 1788269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 25140544 - 25140466
Alignment:
Q  27 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||| ||| |||||| ||||||||||||||||| ||  |||||||| | | ||||||||||||||||||||||||||||    
T  25140544 atcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcatcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 38416937 - 38416987
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacat 58  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  38416937 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacat 38416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 42497938 - 42497817
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| |||||||||||||||| | | | |||||||||| |  || |  | |||| |||  ||||||||||| ||||||||||||    
T  42497938 ttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcatc 42497839  T
Q  103 cttctgttttgggtcattgtta 124  Q
     || |||||| |||||||||||    
T  42497838 attttgttttaggtcattgtta 42497817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 23524012 - 23524068
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 59  Q
    |||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||    
T  23524012 ttcggattatataatccacactgtatcagcacaaatcctaaacatatttgtaacatg 23524068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 25140944 - 25140875
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||||||| || | |||||| ||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctagctttgatccttgtgtttt 25140875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 27181544 - 27181474
Alignment:
Q  41 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||||| || |||||||||   | |||||||||| ||||||||||||||||| ||||||    
T  27181544 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgtttt 27181474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 48095853 - 48095738
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||| | ||||| | ||||||| |||||||||||  | || ||| ||||||||| |||||||  | ||||| |||| |||  | ||||    
T  48095853 atattaatcttcctaattttcatcatcctgttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaa 48095754  T
Q  179 acttccccagaaaatc 194  Q
    ||||||||| ||||||    
T  48095753 acttccccataaaatc 48095738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 49001521 - 49001427
Alignment:
Q  104 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    |||| ||||||||||||||||  ||||| || ||||||||| | |||||  | ||||||||| ||||  ||||||| ||| ||||||||||||||    
T  49001521 ttctattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctccgaaaattctccagaaaatcagaa 49001427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 32600949 - 32601054
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||| ||  ||| |||||||||||||||||| |||||| ||||||||||    ||||||||| |||  |||||||| |||||| ||| |||  |||    
T  32600949 gattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatattaatattcctacctcgcataattc 32601048  T
Q  107 tgtttt 112  Q
    ||||||    
T  32601049 tgtttt 32601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 46381154 - 46381081
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    |||||||||||| |||||||||| |||| ||||| | |||||||||  | |||||| ||||||||| |||||||    
T  46381154 atattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 48629542 - 48629501
Alignment:
Q  83 taatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  48629542 taatcttcctaactcacatccttctgttttaggtcattgtta 48629501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 54631524 - 54631485
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattcta 42  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  54631524 ttcggattatacaatctgaactgtatcagcacaaattcta 54631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 37770079 - 37770001
Alignment:
Q  46 atgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    ||||||||||||||||| |||| ||||  ||  |||||||||| |||||||||| ||||| | ||||  ||||||||||    
T  37770079 atgtttgtaacatgaatagtcaatttaatgaccatattaatctccctaactctcgtccttttattttaagtcattgtta 37770001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 46381239 - 46381202
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattct 41  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  46381239 ttcggattatataatccga-ctgtatcagcacaaattct 46381202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 3425647 - 3425680
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaat 38  Q
    ||||||||||||||||||||| ||||||||||||    
T  3425647 cggattatataatccgaactgcatcagcacaaat 3425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 20078729 - 20078774
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||||| |||||| ||| |||||||||||||| |||||||||||    
T  20078729 atattaatattcctagctcgcatccttctgttttaggtcattgtta 20078774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 42660411 - 42660338
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||| |||||| | ||||||||||| ||  || ||||||||| ||| |||||||||||||||| || |||||    
T  42660411 cagcaccaattctgagcatgtttgtaatattgatagtcattttaaggacaatattaatcttcctagctttcatc 42660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 53836280 - 53836211
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcatttta 72  Q
    ||||||||||||||||||||||||||||  | ||||| | ||| | |||| |||||| || |||||||||    
T  53836280 ttcggattatataatccgaactgtatcaatataaattatgaacctatttgcaacatggatagtcatttta 53836211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 55838978 - 55838933
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgtta 55838933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 38871730 - 38871932
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| ||||||||||||||||||||    
T  38871730 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctcatc 38871829  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||| ||| ||||  |||||||||| ||||||||||||||||| |    
T  38871830 cttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctccgaaactttcccagaaaatcagaaaaaa 38871929  T
Q  203 ttc 205  Q
    |||    
T  38871930 ttc 38871932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 20891672 - 20891873
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  20891672 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatc 20891771  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||||||| |||||||| | |||||| ||||||||| |||||||| | ||||||||| ||||  |||||||||||||||||||| ||||||| |    
T  20891772 cttctgttttgggttattgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctccgaaacttccccagaaaa-cagaaaaaa 20891870  T
Q  203 ttc 205  Q
    |||    
T  20891871 ttc 20891873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 31221401 - 31221199
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  31221401 ttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 31221302  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
     ||||||||||||||||||||||||||||||| | |||||   |||||||  | ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  31221301 tttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 31221202  T
Q  203 ttc 205  Q
    |||    
T  31221201 ttc 31221199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 31929186 - 31928985
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  31929186 ttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcatttta-ggacaatattaatcttcctaactctcatc 31929088  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||| ||||||||||| |||||||| | ||||| |||||||||  | ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  31929087 cttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 31928988  T
Q  203 ttc 205  Q
    |||    
T  31928987 ttc 31928985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 15799288 - 15799486
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| || ||||||||    
T  15799288 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttc 15799387  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |  | ||||||| | ||||  |||||||||| |||||||||||| |||| ||||    
T  15799388 tgttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctccgaaacttgcccagaaaatcaaaaaaaattc 15799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 33487669 - 33487867
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  33487669 ttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 33487768  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||| | |||||||||||||||||||||||||| |||||||||  ||||||  | |||||||||   ||  ||||||||||||||||||||||||||||    
T  33487769 cttcagtttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttccccagaaaatcagaaaa 33487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 39524835 - 39525037
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || ||||||||| | | |||||||||||||||||||||||||    
T  39524835 ttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatc 39524934  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| || |||||  ||||||| |  ||||||||||||||  ||||||| |||||||||||||||||||| |    
T  39524935 cttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctccgaaatttccccagaaaatcagaaaaaa 39525034  T
Q  203 ttc 205  Q
    |||    
T  39525035 ttc 39525037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 37183840 - 37183641
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||    
T  37183840 ggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcttt 37183741  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
     ||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||| |||||| |||||||||||| ||||    
T  37183740 ttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccataaaatcagaaaaaattc 37183641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 6156790 - 6156992
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  6156790 ttcggattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 6156889  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||| ||||||||||||||||||||| | ||||| | ||||||   | ||||||||| ||||  |||||||||| ||||||||||||||||| |    
T  6156890 cttctgtttttggtcattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcggattgctccgaaactttcccagaaaatcagaaaaaa 6156989  T
Q  203 ttc 205  Q
    |||    
T  6156990 ttc 6156992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 7884252 - 7884455
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||||    
T  7884252 ttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctcatc 7884351  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc-agaaaatcagaaaat 201  Q
    |||||||||||||||||||||||||||||||| |||| |||| | |||||  | ||||||||| ||||  |||||||||||||| | ||||||||||||     
T  7884352 cttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccctataaaatcagaaaac 7884451  T
Q  202 attc 205  Q
    ||||    
T  7884452 attc 7884455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 29862671 - 29862868
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||||    
T  29862671 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatc 29862770  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||| | |||||||||||| |||| |||||||| |||||||||| ||||||  | ||||||||  ||||  ||||||||||||| |||||||||||||    
T  29862771 cttccgtttttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccctagaaaatcagaaa 29862868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 38692845 - 38692643
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||| ||||||||| ||| |||||||||||    
T  38692845 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaaggacaatattaatattcataactctcatc 38692746  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
     ||||||||||||||||||||||   |||||| ||||||||| |||||||    |||||| || ||||  ||||||||||||||| |||||||||||| |    
T  38692745 tttctgttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttggtcggattgctccgaaacttccccaaaaaatcagaaaaaa 38692646  T
Q  203 ttc 205  Q
    |||    
T  38692645 ttc 38692643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 205
Target Start/End: Original strand, 15957811 - 15958010
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||  || || |||||| ||| |||||||||||||||||||||  | |||    
T  15957811 ggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactctggttctt 15957910  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
     |||||||||||||| |||| |||||||| |||||||||||||||||    ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  15957911 ttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 15958010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 32842033 - 32841831
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcat 101  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||| || ||||||||| |||  ||||||||||||||||||||||||    
T  32842033 ttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcat 32841934  T
Q  102 ccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    |||||| ||||| ||||||||||||||||| || ||||||||| |||||||  | ||||||||| ||||  ||||||| || |||||||||||||||||     
T  32841933 ccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaaatt-cccagaaaatcagaaaaa 32841835  T
Q  202 attc 205  Q
    ||||    
T  32841834 attc 32841831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 4064782 - 4064585
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||| ||| ||||||||||||||| |||||    
T  4064782 ttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatc 4064683  T
Q  103 cttct-gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||||  ||||||||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  |||||||||||||||||||||||||||    
T  4064682 cttctatttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 4064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 28083438 - 28083238
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||| ||| |||||||||||| |||||| |||||||    
T  28083438 cggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatcct 28083339  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 204  Q
    |||||||| |||||||||||| ||||||||   |||||||  ||||||    ||||||||| ||||  ||||| |||||||||||||||||||||| |||    
T  28083338 tctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctccgatacttccccagaaaatcagaaaaaatt 28083239  T
Q  205 c 205  Q
    |    
T  28083238 c 28083238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 26095151 - 26095348
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||| ||||||||||     
T  26095151 ttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactctcatt 26095250  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| ||||| |||||||||   |||| | | | ||||||| ||||||   | |||||| |||||||  ||||||||||||||||||||||||||||    
T  26095251 cttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttccccagaaaatcagaaaa 26095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 24203746 - 24203554
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  | ||  |||||||| ||| ||||||||| ||||||||||||| |    
T  24203746 ttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttcctaactctcaac 24203647  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
    |||||||||||| |||||||||| |||||||| | ||||||   ||||||  | || |||||| ||||  ||||||||||||| |||||||||    
T  24203646 cttctgttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttcccaagaaaatca 24203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 27158144 - 27158336
Alignment:
Q  4 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 103  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||| |||||| || ||||||||| ||| |||||||| ||||||||  |||||||    
T  27158144 tcggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T
Q  104 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    |||  |||||||||||| |||  |||| ||| | ||||||  |||||||| | ||||||||||||||  |||||||||| |||||||||||||    
T  27158244 ttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctccgaaactttcccagaaaatcag 27158336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13908607 - 13908802
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||| ||||||| || ||||| ||||||||||||||||| | || ||||||||||||| ||||||||||||| ||||  |||||    
T  13908607 ttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttcatc 13908706  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||||| ||||| ||||||||||  |||||||  ||||||||||||||||||   ||||||||| ||||  |||||||  |||||| ||||| ||||    
T  13908707 cttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctccgaaatatccccaaaaaattagaa 13908802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 12847502 - 12847692
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||  |||||||||||| |||||||||||||| ||||||| |     
T  12847502 ttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctcgta 12847601  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
     ||||||||||| |||||||||  |||||||| |||||||||  ||||||  | |||||||||| |||  || ||||||||||||| ||||    
T  12847602 tttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttccccagcaaat 12847692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 14111947 - 14112126
Alignment:
Q  24 tgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtt 123  Q
    |||||||||||||||| |||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||||||  | |||||||| ||||||    
T  14111947 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcct--tattttgggttattgtt 14112044  T
Q  124 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    || |||||||| ||||||||| |||||||    ||||||||  ||||  |||||||||||||||||||||||||||| ||||    
T  14112045 acttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttccccagaaaatcagaaaaaattc 14112126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 40620048 - 40619845
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat-cctt 105  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||| |   |||||||| ||| |||||||||||||||||||||||| ||||    
T  40620048 gattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccctt 40619949  T
Q  106 ctgttttgggtcattgttacatgttc----ttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    |||||||||||||||||||| |||||    ||| ||||||||| ||||| |    |||||| || |||| |||||||||||||| ||||||||| ||||     
T  40619948 ctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaatcataaaaa 40619849  T
Q  202 attc 205  Q
    ||||    
T  40619848 attc 40619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 38372372 - 38372562
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||||| ||| ||||||||||||||||||||||||  |||    
T  38372372 gattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcataattc 38372471  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
            |||||||||||||||||||| | ||||||  |||||||  | ||||||||| |||   |||||||||||||||||| ||||||||| ||||    
T  38372472 --------gtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttccccagaagatcagaaaaaattc 38372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 6800984 - 6800794
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||  |||||||||||||| ||||| | |||||||||| |||||| |  ||||||||| ||| |||  |||||||||| | ||||||||||||    
T  6800984 attatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttct 6800885  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||||| ||||||||||| ||||||||| ||||||||| ||||||| |  |||||||||| |||  |||||||||| |||| ||||||||||    
T  6800884 gttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctccgaaacttgcccaaaaaatcagaa 6800794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 23269397 - 23269593
Alignment:
Q  7 gattatataatccgaactgtatcagca---caaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 103  Q
    |||||||||||||||||| ||||| ||   ||| |||| |||||||||||||||||||   |||||||| ||| |||||||||||||||||||||||| |    
T  23269397 gattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactctcattc 23269496  T
Q  104 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||| || ||||| || |||| ||||||||| ||||||||| |||||||  | ||||||||| ||||  | ||||||||||||||||||||| ||||    
T  23269497 ttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaacttccccagaaaatcataaaa 23269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 27212768 - 27212960
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||  || |||||     | | |||||||||||||||||||||||||    
T  27212768 ttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtcat-----gaacaatattaatcttcctaactctcatc 27212862  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||| |||| ||||||||||| |||||||| ||||||||| |||||||    || |||||  ||||  ||||| ||||||| ||||||||||||||    
T  27212863 cttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctccgatacttccctagaaaatcagaaaa 27212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 40613737 - 40613540
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||| ||  | |||||| ||| | ||||||||||||||||| |||||    
T  40613737 ttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttcatc 40613638  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||| ||| || |||||||| ||  |||||||| | |||||||  |||||  || ||||||||||||||  |||||||||||| || ||||| ||||||    
T  40613637 cttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcctcaaaaaataagaaaa 40613540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 12465154 - 12464984
Alignment:
Q  30 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgt 129  Q
    ||||||||| |||||||| ||||||| ||| || || |||||| ||| ||||||||||||| ||||||| |||||| |||||||| |||||||||| |||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgt 12465055  T
Q  130 tcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| ||||||||| ||||||||   ||||||||| ||||  || |||||| ||||| ||||||||||||    
T  12465054 tcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactaccccaaaaaatcagaaaa 12464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 26898790 - 26898663
Alignment:
Q  78 aatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccga 177  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||  | ||||||||| ||||  |||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccga 26898691  T
Q  178 aacttccccagaaaatcagaaaatattc 205  Q
    ||||| |||| |||||||||||| ||||    
T  26898690 aacttgcccaaaaaatcagaaaaaattc 26898663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 26093509 - 26093618
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||| |||| |||||||| ||||| | ||||||||| ||||||| || ||||||||||||| || |||||||||| |||||||||||||||    
T  26093509 gattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctcatccttc 26093608  T
Q  107 tgttttgggt 116  Q
    ||||||||||    
T  26093609 tgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 25747084 - 25747168
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| || |||||||    
T  25747084 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 26190360 - 26190265
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactct 98  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||| ||||| |||||||||||    
T  26190360 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 11186239 - 11186046
Alignment:
Q  1 acttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 100  Q
    |||| |||||||||||||||||||||||||||| ||||||| |   | ||||||||||| ||   |  ||||  ||  |||||||| ||| | |||||||    
T  11186239 actttggattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctca 11186140  T
Q  101 tccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
    |||||||||||| ||| ||||||| ||||||||| | ||||||  |||||||||  |||||||| |||||  ||||||||||| |||||||||||    
T  11186139 tccttctgttttaggtaattgttagatgttcttagtaaaaaattcggttttcaa-ctacttgattagattgctccgaaacttctccagaaaatca 11186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 8739047 - 8738947
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||| ||||||| ||||| |||| ||| |||||| ||||||||||||||||| || ||||||||| | | |||||||||||||||||||||||||    
T  8739047 ttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctcatc 8738948  T
Q  103 c 103  Q
    |    
T  8738947 c 8738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 8739250 - 8739148
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||||| ||||| | |||||| |||||| |||||||||||||||||  | ||||||||| ||| |||||||||||||||||||||||||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  103 ctt 105  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 16429341 - 16429450
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||||| ||||  |||||||| |||||| |||||||||||||||||||| ||| ||||| ||| |||||||||||||| |||||| |||    
T  16429341 ttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactcttatc 16429440  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  16429441 cttgtgtttt 16429450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 26622172 - 26622364
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| |||||||||||||||||||||   ||  |||||||||||| | |   ||  ||| |||  ||||||| |||||||||| |||||    
T  26622172 ttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacat-agtaaccagattaaggaccatattaaacttcctaactttcatc 26622270  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||||| |||| ||| |||||||  ||||  || ||||||||| |||||||    ||||||||||||||  |||||||||||| |||||||||||||    
T  26622271 cttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcctcagaaaatcagaa 26622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 28445247 - 28445162
Alignment:
Q  27 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||| ||| |||||| ||||||||||||||||| || ||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  28445247 atcaacaccaattctgaacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatccttgtgtttt 28445162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 41253359 - 41253480
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| ||||||||| |||||| |||| | ||| ||||||||||||||||    | |||| | |  |||||||||||||||||| |||||    
T  41253359 ttcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatc 41253458  T
Q  103 cttctgttttgggtcattgtta 124  Q
    || ||||||| |||||||||||    
T  41253459 ctcctgttttaggtcattgtta 41253480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 41639552 - 41639385
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||||||||||||||||||||||||||||||||| |   ||||||||||||  ||   || ||||  || ||||||||| | ||||||||||||| ||    
T  41639552 ggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctcatcttt 41639453  T
Q  106 ctgttttgggtcattgttacatgttcttact---caaaaatcaggttttcaagatacttgatcagatt 170  Q
     |||||| |||||||||||  |||||||| |    ||||||| | |||||| | ||||||||||||||    
T  41639452 ttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 21070429 - 21070525
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 103  Q
    ||||||||||||| ||||| ||||| ||||||||| ||||| ||||||||||  || ||||||||| ||| ||||||||||||| |||| |||||||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatcc 21070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 1350372 - 1350290
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaa 85  Q
    ||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||| ||   ||||||||||| ||||||||    
T  1350372 ttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 27494215 - 27494106
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  | |||| ||||| | |||||| |||||||||||| ||||||||||| || ||||||||| ||| |||||||||||||||||| | | ||    
T  27494215 ttcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaacccccgtc 27494116  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  27494115 cttgtgtttt 27494106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 18514865 - 18515053
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||| |||| | |||| ||||||||||||  |||||||||||||  ||   || |||  |||  |||| |||||||||||||| ||||||||    
T  18514865 gattatataatctgaaccgcatcatcacaaattctaagtatgtttgtaacatagataaccagttttaggaccatatcaatcttcctaactcacatccttc 18514964  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
     |||||  ||||||||||   ||| | | ||||||||| ||||||| || |||||||||| |||  |||||||  | ||||||||||||    
T  18514965 agttttacgtcattgttagcggttttcagtcaaaaatccggttttcgagctacttgatcaaattgctccgaaaacttcccagaaaatca 18515053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 8973653 - 8973562
Alignment:
Q  21 aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||| | |||| |||| | ||||||||||||||||| ||  |||||||| ||| |||||||| ||||||||||||||||||| ||||||    
T  8973653 aactgtacccgcaccaattttgaacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatccttgtgtttt 8973562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 33901094 - 33901213
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||  |||| ||| ||||||||  | ||||||   || |||||||||||  ||||||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  179 acttccccagaaaatcagaa 198  Q
    |||||||  |||||||||||    
T  33901194 acttccctcgaaaatcagaa 33901213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 34530300 - 34530383
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| |||||| |||||||||||||||||  | ||||||||| ||| ||||||||||||||||||| ||||| || ||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcatcattgtgtttt 34530383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 16429131 - 16429233
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||||| ||| | | || ||| |||||||||||||||||||||||| || |||||||||  || |||| |||||||| |||||||||||    
T  16429131 ttcggattacgtaatccaaacagcaccaacaccaattctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatc 16429230  T
Q  103 ctt 105  Q
    |||    
T  16429231 ctt 16429233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 28445441 - 28445358
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||  || || |||||||| ||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctttgtagctttcatccttgtgtttt 28445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 38641026 - 38641102
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||||||  | |||||||| ||||||    
T  38641026 aattctgaacatgtttgtaacatagatagtcattttaaggacaatattaatcttcctagttttcatccttgtgtttt 38641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 27493993 - 27493902
Alignment:
Q  21 aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||| |||||||  |||| || |||||||||||||||| || |||||||||   | ||||||||||||||||||  |||||||| ||||||    
T  27493993 aactgcatcagcatcaattatatacatgtttgtaacatggatagtcattttaaaaacaatattaatcttcctaacattcatccttgtgtttt 27493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 3435321 - 3435454
Alignment:
Q  10 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 109  Q
    ||||||||||||||| ||| |||| ||||| ||||| ||||||||||||| ||   || ||||  |||  | ||||| ||  ||||| |||||||| |||    
T  3435321 tatataatccgaactatattagcataaattttaaacctgtttgtaacatggataaacaatttaaagagcttgttaattttgttaactttcatccttatgt 3435420  T
Q  110 tttgggtcattgttacatgttcttactcaaaaat 143  Q
    ||| ||||||||||| ||||| | | ||||||||    
T  3435421 tttaggtcattgttagatgttttcaatcaaaaat 3435454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 31561646 - 31561695
Alignment:
Q  146 ggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 195  Q
    |||||||| | ||||||||||||||  |||||||||| ||||||||||||    
T  31561646 ggttttcatgctacttgatcagattactccgaaactttcccagaaaatca 31561695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 34530117 - 34530201
Alignment:
Q  27 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||||| |||| |  ||||||||||| | || || ||||||||| ||| | ||||||||||||||||| |||||||| ||||||    
T  34530117 atcagcaccaattttggacatgtttgtagc-tggatagtcattttaaggacagtattaatcttcctaactttcatccttgtgtttt 34530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 4028040 - 4027980
Alignment:
Q  3 ttcggattatataa-tccgaactgtatcagcacaaattctaaacatgtttgtaacatgaat 62  Q
    |||||||||||||| |||||| |||||||||||||||| |||   ||||||||| ||||||    
T  4028040 ttcggattatataaatccgaattgtatcagcacaaattataagtttgtttgtaatatgaat 4027980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 26093620 - 26093712
Alignment:
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||||||||||  |||||||| ||||||||   ||||||| | || |||| ||||||    |||||||||| || ||||||||||||    
T  26093620 gttttgggtcattgttagttgttcttagtcaaaaattgagttttcaggctatttgaacagattgcctcgaaacttcctcacaaaatcagaaaa 26093712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 38640818 - 38640894
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| ||||||||| ||||||| || |||| |||| ||| ||||||||||||| || || || ||||| ||||||    
T  38640818 aattctgaacatgtttataacatggatagtcaatttaaggacaatattaatcttcatagctttcgtccttgtgtttt 38640894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 3902868 - 3902666
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||    
T  3902868 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcatc 3902769  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||| ||||  || ||||||| ||||||||||||||||| |    
T  3902768 cttctgctttgggtcattgttacatgttcttagtcaaaaatcgggttttcagattacttgatcggattgctcggaaacttgcccagaaaatcagaaaaaa 3902669  T
Q  203 ttc 205  Q
    |||    
T  3902668 ttc 3902666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 50716349 - 50716547
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  50716349 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatc 50716448  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||| | ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  50716449 attccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 50716547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 50796498 - 50796300
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  50796498 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatc 50796399  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||| | ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  50796398 attccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 50796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 3352128 - 3351926
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||     
T  3352128 ttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatt 3352029  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||||||||||||||||  ||||||| | ||||||  |||||||| | ||||||||| ||||  ||||||||||||| |||||||||||||| |    
T  3352028 cttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaa 3351929  T
Q  203 ttc 205  Q
    |||    
T  3351928 ttc 3351926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 34821405 - 34821203
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||| | |||||    
T  34821405 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaaatttcatc 34821306  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| | ||||| | |||||||| | ||||||||| |||   || ||||||||||||||||||||||||| |    
T  34821305 cttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttccccagaaaatcagaaaaaa 34821206  T
Q  203 ttc 205  Q
    |||    
T  34821205 ttc 34821203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 38977805 - 38977608
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  38977805 attatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttct 38977706  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||||||| ||| |||| | ||||| |  |||||| || ||||||||| ||||  ||| ||||||||||||||||| |||||| ||||    
T  38977705 gttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttccccagaaaataagaaaaaattc 38977608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 52777328 - 52777530
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || | ||||||| ||| ||||||||||||| ||||||| |||    
T  52777328 ttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactcttatc 52777427  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||| |||||||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  52777428 cttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 52777527  T
Q  203 ttc 205  Q
    |||    
T  52777528 ttc 52777530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 501199 - 501036
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||| ||||||||||||    
T  501199 gattatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttc 501100  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagatt 170  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||  | ||||||||| ||||    
T  501099 tgttttgggtcattgttacatgtttttattcaaaaatcatgttttcgggctacttgatcggatt 501036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 28873102 - 28873305
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||||||||||| ||||||||||     
T  28873102 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcatt 28873201  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    |||| | |||||||||| |||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||| ||||||     
T  28873202 cttccgcttttgggtcactgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaattagaaaaa 28873301  T
Q  202 attc 205  Q
    ||||    
T  28873302 attc 28873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 35142171 - 35142372
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||    
T  35142171 ttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatc 35142270  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||| |||||||||||||||  |||||||| |||||||   |||||||  | ||||||||| ||||  |||||||||| ||||||||||||||||| |    
T  35142271 cttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaactt-cccagaaaatcagaaaaaa 35142369  T
Q  203 ttc 205  Q
    |||    
T  35142370 ttc 35142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 47123136 - 47123320
Alignment:
Q  16 atccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttggg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  116 tcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||||||||| |||||||| | ||||| |   |||||  | ||||||||| ||||  |||||||||| |||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 47123320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 43473031 - 43472828
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  43473031 ttcgaattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatc 43472932  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc-agaaaatcagaaaat 201  Q
    ||| ||||||||||||||||||  |||||||| ||||||||| |||||||  | ||||||||| ||||  || ||||||||||| | ||||||||||||     
T  43472931 cttttgttttgggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttccccaaaaaaatcagaaaaa 43472832  T
Q  202 attc 205  Q
    ||||    
T  43472831 attc 43472828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 2358684 - 2358482
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  2358684 ttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 2358585  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||| ||| |||||| ||||||||| ||||||   | |||||||||  |||  || |||||||||||| |||||||||||| |    
T  2358584 cttttgttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttccccaaaaaatcagaaaaaa 2358485  T
Q  203 ttc 205  Q
    |||    
T  2358484 ttc 2358482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 39149906 - 39150108
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||   | |||||||||  || ||||||||| |||||||||||||||    
T  39149906 ttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaactctcatc 39150005  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||||||||| ||||||||||||||| | ||||| | |||||||  | |||||| ||  |||  |||||||||||||||||||||||||||| |    
T  39150006 cttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttccccagaaaatcagaaaaaa 39150105  T
Q  203 ttc 205  Q
    |||    
T  39150106 ttc 39150108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 51258505 - 51258703
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||| |||  ||||||||||||| ||||||||||||||     
T  51258505 attatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttt 51258604  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||     |||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  51258605 tgttttgagtcattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 51258703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 47130502 - 47130686
Alignment:
Q  16 atccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttggg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  116 tcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||||||||| |||||||| | ||||| |   |||||  | ||||||||| ||||  |||||||||| |||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 47130686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 30721862 - 30721676
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||      | |||||||| ||| ||||||||||||||||||||| |||||||    
T  30721862 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac------tctcattttagggacaatattaatcttcctaactcttatccttc 30721769  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||| |||  ||| ||| ||||||||  ||||||| || ||||||||| ||||  |||||||||| |||||||||||||||||    
T  30721768 tgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaactt-cccagaaaatcagaaaa 30721676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 51540676 - 51540527
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||||| || || ||||||||| ||| |||||||||||||||||||||||||    
T  51540676 ttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctcatc 51540577  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    |||||  ||||||||||||||||| ||||||| ||||||||| |||||||    
T  51540576 cttctcctttgggtcattgttacacgttcttagtcaaaaatcgggttttc 51540527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 47302117 - 47302318
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||| || |||||||| |||    
T  47302117 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatc 47302214  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaac-ttccccagaaaatcagaaaat 201  Q
    ||| |||||||||||||||||||||||||||| |||||||||  ||||||  | ||||||||| |||| ||| ||||| ||||| | ||||||||||||     
T  47302215 cttttgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactttcccaaaaaaatcagaaaaa 47302314  T
Q  202 attc 205  Q
    ||||    
T  47302315 attc 47302318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 49096284 - 49096091
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttc 106  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||  ||||| |||||||||||||||||||||||    
T  49096284 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttc 49096185  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||| ||||||||||| |||||||  |||||||||  ||||||  | ||||||||| ||||  ||| |||||||||| |||| ||||||||    
T  49096184 tgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccccgaaagtcagaaaa 49096091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 51492896 - 51493087
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||| ||||||||||||||||  |||||||||||||| ||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||    
T  51492896 ttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctcatc 51492995  T
Q  103 cttctgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
    ||| |||||| |||||||||||  |||||||| |  ||||||  ||||||     ||||||||||||||  |||||||||||||||||||||    
T  51492996 cttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttccccagaaaat 51493087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 47739990 - 47739793
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||| | ||| ||||||||||||| |||||||||||||||    
T  47739990 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttc 47739891  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||| ||||||| |||| || | ||| | ||||||  |||||||  | ||||||||| ||||  ||| ||||||||||||||||| |||||| ||||    
T  47739890 tgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaaaaattc 47739793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 33438618 - 33438731
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| |||||||||||||||||||||||||    
T  33438618 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactctcatc 33438717  T
Q  103 cttctgttttgggt 116  Q
    ||||||||||||||    
T  33438718 cttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 46622846 - 46622655
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||            || ||||||||| ||| ||||||||||||||| ||||||||     
T  46622846 ttcggattatataatccgaactgtatcagcacaaattctaaacatgg-----------atagtcattttagggacaatattaatcttccttactctcatt 46622758  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | |||||    ||||||||| ||||  |||||||||| ||||||||||||||||| |    
T  46622757 cttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaa 46622658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 35345931 - 35345776
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaa 142  Q
    ||||||||||||||||| || ||||||||||||| ||||||||| || ||||||||||||||| ||||||  ||||||||||  |||||||| |||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  143 tcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    |  |||||||  | || |||||| ||||  ||||||||||||||||||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttccccagaaaatcagaa 35345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 3938357 - 3938481
Alignment:
Q  81 attaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaac 180  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  181 ttccccagaaaatcagaaaatattc 205  Q
    ||||||| |||||||||||| ||||    
T  3938457 ttccccaaaaaatcagaaaaaattc 3938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 5127955 - 5127812
Alignment:
Q  9 ttatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg 108  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||||||| ||   ||||||||||| ||||||||||||| || ||||||||| | ||    
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttg 5127856  T
Q  109 ttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    ||||| ||||||||||  |||||||  ||||||||| |||||||    
T  5127855 ttttgcgtcattgttagttgttcttggtcaaaaatctggttttc 5127812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 46624855 - 46624958
Alignment:
Q  41 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaa 140  Q
    |||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||| |||||    
T  46624855 taaatatgtttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaa 46624954  T
Q  141 aatc 144  Q
    ||||    
T  46624955 aatc 46624958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 40062476 - 40062669
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||| |||||||||||||| | |   ||||||||||||| ||    | ||||  ||  ||||||||||||||||||||  ||    
T  40062476 ttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctggtc 40062575  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    ||| |||||| ||||||| |||  |||||||| ||||||||| |||||||  | ||||||||||||||   |||||| ||||| ||||||||||    
T  40062576 cttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaaatttccctagaaaatcag 40062669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 27143473 - 27143357
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||| || || |||||| ||| ||||||||  ||||||||  ||||||||||    
T  27143473 attatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaagattcctaaccatcatccttct 27143374  T
Q  108 gttttgggtcattgtta 124  Q
     |||||| |||||||||    
T  27143373 attttggatcattgtta 27143357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 170
Target Start/End: Original strand, 29048444 - 29048607
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||| ||||| ||||| |||||||||| || |||||||||||||||   || |||||| ||| ||||||||||||| ||||||| ||||||     
T  29048444 gattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatgaca-gttattttaaggataatattaatcttcataactcttatcctta 29048542  T
Q  107 tgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagatt 170  Q
    |||||| |||||||||||  |||||||| |  ||||||| |||||||| | ||||||||| ||||    
T  29048543 tgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggatt 29048607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 3937476 - 3937563
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttc 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||   ||||||||||| |||||||||||||    
T  3937476 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 54229959 - 54229764
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| | |||||||||| |||||||||| |   ||||||||||||||||   || |||| |||  |||||||||||||| |||| ||||    
T  54229959 ttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgcatc 54229860  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
     || |||| | |||||||||||  |||| ||| ||||||||  |||||||  | ||||||||||||||  || |||||||||||| ||||| ||||    
T  54229859 attatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaacttccccaaaaaataagaa 54229764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 29035895 - 29036017
Alignment:
Q  3 ttcggattatataatccgaactgt-atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 101  Q
    |||| ||||||||||| ||||||| |||| |||||||||||| ||||||||||||||| ||  |||||||| |||  |||||| ||||||||||||||||    
T  29035895 ttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctcat 29035994  T
Q  102 ccttctgttttgggtcattgtta 124  Q
    | || |||||| |||||||||||    
T  29035995 cattatgttttaggtcattgtta 29036017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 14828978 - 14828842
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||||||| | ||| | | ||||||||||| |||||| ||||||| ||  | |||||| ||| ||||||||||||| |||| ||||||| |    
T  14828978 ggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctcatccat 14828879  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaa 142  Q
    |||||||||||| ||||||  |||||||| |||||||    
T  14828878 ctgttttgggtccttgttagttgttcttagtcaaaaa 14828842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 47769359 - 47769480
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||| |||| ||| ||||||||| |||||||| ||||||||||||||||| || ||||||||| | |  |||||||||||  ||||| |||||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  103 cttctgttttgggtcattgtta 124  Q
     |||| |||| |||||||||||    
T  47769459 attctattttaggtcattgtta 47769480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 47980063 - 47979970
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 101  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||||  || ||||||||| ||| |||||||||||| |||||||||||    
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcat 47979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 45712146 - 45712053
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaact 96  Q
    |||||||||||||||| |||||||||||||||||||| | | ||||||||||||||| ||  ||||||||  ||  ||||||||||||||||||    
T  45712146 ttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 26053579 - 26053485
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatgg-agaatattaatcttcctaactctca 100  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||| || || ||||||||| || | |||| |||||||||||| |||||    
T  26053579 gattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 8735530 - 8735599
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||  || ||||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 8735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 9087771 - 9087840
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||  || ||||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 9087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 33842136 - 33842027
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||| ||||||  || || |||  ||| |||| ||||||||||||||| ||| || ||||||||| ||| ||||||||| ||| |||||||||||    
T  33842136 ttcggattacataatctaaattgcatcgacaccaattttaaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatc 33842037  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  33842036 cttgtgtttt 33842027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 33439383 - 33439475
Alignment:
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||||||||||| | |||||| | ||||||||| |||||    ||||||||| ||||  |||||||||| |||||||||||||||||    
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 33439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 4300276 - 4300201
Alignment:
Q  69 tttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatc 144  Q
    |||| ||| ||||||||||||||||||| |||||||| ||| || ||||||||||| ||||||||| | |||||||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatc 4300201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 29035811 - 29035885
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag 77  Q
    ||||||||||||||| |||| ||||| |  ||||||||| ||||||||||||||||| || ||||||||| ||||    
T  29035811 ttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcattttaaggag 29035885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  11 atataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtt 110  Q
    |||||||| ||| ||||| |||||||||| | |  |||||| ||||||  ||   ||||||| |||  |||||||||||| |||||||||||||||||||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  111 ttgggtcatt 120  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 51816387 - 51816508
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||| ||||| |||||||  |||||| |||||||||||  ||||| || || |||||   ||||||  | ||||||||||||||  ||||||    
T  51816387 atattaatcttcataactatcatcctcatgttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaa 51816486  T
Q  179 acttccccagaaaatcagaaaa 200  Q
    | ||||||| ||||| ||||||    
T  51816487 atttccccaaaaaataagaaaa 51816508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 40062344 - 40062241
Alignment:
Q  93 aactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    ||||||| ||||| |||| | ||||||| |||  |||||||| ||||||||| | |||||| | ||||||||||||||   |||||| ||||| ||||||    
T  40062344 aactctcgtccttttgttctaggtcattattagttgttcttaatcaaaaatccgattttcaggttacttgatcagattgcaccgaaatttccctagaaaa 40062245  T
Q  193 tcag 196  Q
    ||||    
T  40062244 tcag 40062241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  30 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 93  Q
    ||||| |||||| |||||||||||||||||  | ||||||||| ||| ||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 50384534 - 50384340
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||| ||||||||||| ||| ||||| | |   ||||||||||||  ||  ||| |||| |||  |||||||||||  ||||||| |||||||    
T  50384534 gattatataatacgaactgtatctgcataaattatgagtttgtttgtaacatacataatcagtttaaggaacatattaatctttataactctaatccttc 50384435  T
Q  107 tgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||  ||||||||||  | |||||| |  ||||||   ||||||     |||||||||||||  ||||||||||||||| ||||||| ||||    
T  50384434 tgttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccgaaacttccccaaaaaatcataaaa 50384340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 34010151 - 34010030
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||| ||||||| || ||||| | |   ||||||||||||| || |  | |||| |||  |||||||| || |||||||| |||    
T  34010151 ttcggattatataatccgaattgtatcaacataaattttgagtctgtttgtaacatggatagctagtttaaggatcatattaatttttctaactcttatc 34010052  T
Q  103 cttctgttttgggtcattgtta 124  Q
    ||| |||||| | |||||||||    
T  34010051 cttttgttttagatcattgtta 34010030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 512310 - 512214
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctc 99  Q
    |||||||||||| ||| ||| |||||||  ||||||| | ||||||||| ||||||| || |||||||||  ||  |||||||| ||| ||||||||    
T  512310 ttcggattatatcatctgaattgtatcaatacaaattatgaacatgtttataacatggatagtcattttaaagaccatattaatattcataactctc 512214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 43420189 - 43420071
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| ||| ||||||| |||||||| | |||| |||||||||||| ||  |||||||| | |  ||||||| ||| | |||| ||||  ||    
T  43420189 ggattatataatcagaattgtatcaacacaaattatgaacacgtttgtaacatggataatcattttaagaaccatattaaccttgccaactatcattatt 43420090  T
Q  106 ctgttttgggtcattgtta 124  Q
     || ||| |||||||||||    
T  43420089 ttggttttggtcattgtta 43420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 26464999 - 26465044
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    |||||||||||| |||||||||| ||| |||||| |||||||||||    
T  26464999 atattaatcttcttaactctcattcttatgttttaggtcattgtta 26465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 32025111 - 32025172
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttc 90  Q
    |||||| |||||| ||||||||||||| || ||| ||| ||||| ||| |||||||||||||    
T  32025111 cagcaccaattctgaacatgtttgtaatataaatagtcgttttaaggacaatattaatcttc 32025172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 8e-70; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 36468594 - 36468401
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | ||||||||||||| ||||||||||||||||    
T  36468594 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcataactctcatccttct 36468495  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||  | ||||||||| ||||  |||||||||||||||||||||||||||||    
T  36468494 gttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaat 36468401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 9151897 - 9152082
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  9151897 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 9151996  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||     ||||||||| ||||  |||||||||||| |||||||    
T  9151997 tgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccacagaaaa 9152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 28230530 - 28230381
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  28230530 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatc 28230431  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    ||||||||||||||||||||| |||||||||| |||||| || |||||||    
T  28230430 cttctgttttgggtcattgttgcatgttcttagtcaaaattcgggttttc 28230381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 19225660 - 19225458
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||  |||| |||||||||||||||||||    
T  19225660 ttcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatc 19225561  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||||||||||||||||   |||||| |||||||||||||||||    || |||||| ||||  |||||||||||||||||||||||||||| |    
T  19225560 cttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 19225461  T
Q  203 ttc 205  Q
    |||    
T  19225460 ttc 19225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 42865162 - 42864968
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||    
T  42865162 cggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 42865063  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||| ||||  || ||||| |||||||||||| |||||    
T  42865062 tctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatccccagaaaattagaaa 42864968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 42925703 - 42925506
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  42925703 ttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 42925604  T
Q  103 cttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    |||| | |||||| |||||||||| |||||||| ||||||||  |||||||  | ||||||||| ||||  |||||||||| ||||||||||||||||    
T  42925603 cttccgtttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaacttacccagaaaatcagaaa 42925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 36629302 - 36629502
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||  | ||||||||| |||||||||||||||||||||||||||||    
T  36629302 ttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaactctcatc 36629399  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||||| ||| |||||| || ||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||| |||||||||||| |    
T  36629400 cttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccaaaaaatcagaaaaaa 36629499  T
Q  203 ttc 205  Q
    |||    
T  36629500 ttc 36629502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 36408468 - 36408670
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||| ||||||||||||| |||||||| |     
T  36408468 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctcttt 36408567  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||    ||||||||| ||||  ||||||||||| ||| |||||||||||| |    
T  36408568 cttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttctccaaaaaatcagaaaaaa 36408667  T
Q  203 ttc 205  Q
    |||    
T  36408668 ttc 36408670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 33151305 - 33151501
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||     || ||| |||||||||||||||||||||||||    
T  33151305 ttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt-----tagggacaatattaatcttcctaactctcatc 33151399  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||| ||||||||||||||||  |||||||| ||||||||  |||||||    ||||||||| |||| ||||||||||| ||||||||||||||||| |    
T  33151400 cttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattccgaaactt-cccagaaaatcagaaaaaa 33151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 31985579 - 31985382
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||| ||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  31985579 ttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaactctcatc 31985480  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     |||||||||||||||||||||   ||||||| ||||||||| ||||||   | |||||||||||||| |||| |||||| |  | ||||||||||||    
T  31985479 attctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactttcttacaaaatcagaaaa 31985382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 3304820 - 3304623
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||   ||||||| ||| ||||||||||||||||||||| |||    
T  3304820 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatc 3304721  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     || ||||||||||||||||||| |||||||| ||||||||| |||| ||  | ||||||||| ||||  || |||||||||| | ||||||| ||||    
T  3304720 attttgttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttcccaaaaaaatcaaaaaa 3304623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 1518804 - 1519000
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||  |||||||||||| ||||||||||||| |||||||||||    
T  1518804 ttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctcatc 1518903  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 199  Q
    ||||| |||||||| |||||||  |||||||| | ||||||  |||||||    ||||||||| ||||  |||||||||| || |||||| ||||||    
T  1518904 cttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctccgaaactttcctagaaaaacagaaa 1519000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 3936210 - 3936394
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||    
T  3936210 attatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttct 3936309  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
     ||||||||||||||||| | |||||| ||||||||| | |||||    | ||||||| ||||  ||||||||||||||||||||    
T  3936310 attttgggtcattgttacctattcttagtcaaaaatcggattttcggactgcttgatcggattgctccgaaacttccccagaaaa 3936394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 24690393 - 24690193
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| |||||||||||||| ||||| ||| ||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||||    
T  24690393 ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcatcctt 24690294  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcag-gttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 204  Q
     |||||||||||||||||||  ||||||| |||| |||| |  |||||  | ||||||||| ||||  ||||||||||| ||| |||||||||||| |||    
T  24690293 ttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttctccataaaatcagaaaaaatt 24690194  T
Q  205 c 205  Q
    |    
T  24690193 c 24690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 19818494 - 19818679
Alignment:
Q  20 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 119  Q
    ||||| ||||||||||||| ||||||||| |||||||||| || || |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19818494 gaactctatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcat 19818593  T
Q  120 tgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||| |||||||  || |||||| ||||||     ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  19818594 tgttacctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 19818679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 36946353 - 36946165
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||  |||||||| | | |||||||| ||||||||||||||||    
T  36946353 ttcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaatattaagcttcctaactctcatc 36946255  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 192  Q
    ||| ||||||||||||||||||  |||| ||| |||||| || |||||||  |||||||||||  |||  | ||||||||||||||||||    
T  36946254 cttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttccccagaaaa 36946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 31643138 - 31643339
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||| ||||||| |||| |||||||| ||| ||||||| || |  |||||| ||| ||||||||||||||||||||| |||    
T  31643138 ttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactcttatc 31643237  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||||||||||||||||||||||||| ||||||||| || ||||    ||||||||| ||||  || ||||||||| || |||||||||||| |    
T  31643238 cttttgttttgggtcattgttacatgttcttagtcaaaaatc-gggtttcggactacttgatcggattgctctgaaacttccgcaaaaaatcagaaaaaa 31643336  T
Q  203 ttc 205  Q
    |||    
T  31643337 ttc 31643339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 8154996 - 8155198
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||  |||| ||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||| |||||||||| |||| |||    
T  8154996 ttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagctcttatc 8155095  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||| ||||||| |||| |||||||| ||||||||| |||||||    |||||||||  ||| ||| |||||||||| | |||||||||||| |    
T  8155096 cttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttcccaaaaaaatcagaaaaaa 8155195  T
Q  203 ttc 205  Q
    |||    
T  8155196 ttc 8155198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 24042250 - 24042132
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||| |||||||||||||||||||    
T  24042250 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatc 24042151  T
Q  103 cttctg-ttttgggtcatt 120  Q
    |||| | ||||||||||||    
T  24042150 cttccgtttttgggtcatt 24042132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 33574105 - 33573903
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| ||||||||||| ||||||||| |||||||||  ||||||| ||||||||||| ||    |||||| ||| |||||||||||| |||||||| |||    
T  33574105 ttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactcttatc 33574006  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||| |||||||||||||||| ||| ||||||||  ||||||| |  ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  33574005 cttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 33573906  T
Q  203 ttc 205  Q
    |||    
T  33573905 ttc 33573903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 37518357 - 37518235
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||   || ||||||||| | | | |||||||||||||||||||||||    
T  37518357 ttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactctcatc 37518258  T
Q  103 cttctgttttgggtcattgttac 125  Q
    |||||||||| ||||||||||||    
T  37518257 cttctgttttaggtcattgttac 37518235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 5278361 - 5278482
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||||||||| |||| ||||| | ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| |||    
T  5278361 ttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactcttatc 5278460  T
Q  103 cttctgttttgggtcattgtta 124  Q
    ||||||||||||||||||||||    
T  5278461 cttctgttttgggtcattgtta 5278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 47202591 - 47202786
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | | ||||| ||| ||||||||||||||||||||| |||    
T  47202591 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatc 47202690  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||||||||||        ||||||| ||||||||| |||||||  | ||||||||  ||||  ||  ||||||||||| |||||||||||| |    
T  47202691 cttttgttttgggtcat-------cgttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttccccaaaaaatcagaaaaaa 47202783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 6467198 - 6467009
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||| ||| || || |||||| ||  ||||||||| |||||||||||| ||||||    
T  6467198 gattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttc 6467099  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    | |||| |||||||||||  |||||||| | ||||||  ||| |||  | ||||||||| |||| ||| |||| ||||| ||||||||||    
T  6467098 tattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccctagaaaatcag 6467009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 43737240 - 43737381
Alignment:
Q  64 gtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttga 163  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||| | |||||||  | |||||||    
T  43737240 gtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctacttga 43737339  T
Q  164 tcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    || ||||  ||||||| || ||||||||||||||||| ||||    
T  43737340 tcggattgctccgaaattttcccagaaaatcagaaaaaattc 43737381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 7115332 - 7115135
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| || || |||||| |||||||| | |   ||||| ||||||| ||   || |||||||| ||||||||||||  |||||||||||    
T  7115332 ttcggattatataattcggaccgtatcaacacaaattttgagtttgtttctaacatggataaccaatttatggacaatattaatcttgataactctcatc 7115233  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| |||| |||||||||||  |||||||| |||||||||  ||||||  | |||||||||  |||  || ||||||||| |||||||||||||||    
T  7115232 cttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctctgaaacttcctcagaaaatcagaaaa 7115135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 37398877 - 37398760
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||  |||||||| | ||||||  |||||| | | ||||||||||||||  ||||||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  179 acttccccagaaaatcag 196  Q
    ||||||| ||||||||||    
T  37398777 acttccctagaaaatcag 37398760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 43185887 - 43186000
Alignment:
Q  11 atataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtt 110  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||  ||||||| |||| ||||||||  |||||||||||||| ||| | ||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatatt 43185986  T
Q  111 ttgggtcattgtta 124  Q
    || |||||||||||    
T  43185987 ttaggtcattgtta 43186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 48775710 - 48775803
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 101  Q
    |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| |||| |||| ||| ||||||||||||||||||| ||||    
T  48775710 ggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatcat 48775803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 26555128 - 26555017
Alignment:
Q  94 actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||||| | |||||||  | ||||||||| ||||  || ||||||| ||||||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactttcccagaaaat 26555029  T
Q  194 cagaaaatattc 205  Q
    ||||||| ||||    
T  26555028 cagaaaaaattc 26555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 39581840 - 39581984
Alignment:
Q  7 gattatataatccgaactgtatcagcaca--aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    |||||||||||||||||||||||||||||  |||| |||   ||||||||||||||||   || ||||   ||| ||||||||||| |||||||||| ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaatttaa--agactattaatcttcataactctcattct 39581937  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 151  Q
    |||||||| |||||||||||  | |||||  ||||||||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttt 39581984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 16983804 - 16983673
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| |||||||||||||||| |     ||||||||||||| ||   || ||||  || |||||||||||||||||||||||||    
T  16983804 ttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctcatc 16983705  T
Q  103 cttctgttttgggtcattgttacatgttctta 134  Q
    ||||| |||| ||||||| |||  ||||||||    
T  16983704 cttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 8214552 - 8214462
Alignment:
Q  14 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    |||||| ||||| | ||| || |||| | ||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||    
T  8214552 taatccaaactgcaccagaacgaattatgaacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 8214352 - 8214243
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  |||| | ||||| |||| ||| |||||| |||||||||| |||||| || |||||| || ||| |||||||||||||||||||||||||    
T  8214352 ttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctcatc 8214253  T
Q  103 cttctgtttt 112  Q
     || ||||||    
T  8214252 attgtgtttt 8214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 48776268 - 48776175
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 101  Q
    |||||||||||| || | ||| |||||||||| | ||||||||| ||||||| || || |||||| ||| ||||||||||||||||||||||||    
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcat 48776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6467795 - 6467843
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 51  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6467795 ttcggattatataatccgaactgtatcagcataaattttaaacatgttt 6467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 5731005 - 5730941
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 100  Q
    ||||||||||||||||||| ||||||| |||||||||   | |||||||||||| ||||||||||    
T  5731005 aattctaaacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctca 5730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 25613175 - 25613058
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||| ||| | ||||||||||||| ||||||| ||  |  |||||||||| || | || |||| ||   |||||||||||| |||||| ||||    
T  25613175 ttcggattataaaattcaaactgtatcagcataaattcttaaatttcttgtaacatggatagccaatttacgggtcatattaatcttcataactcacatc 25613076  T
Q  103 cttctgttttgggtcatt 120  Q
    |||||||||  |||||||    
T  25613075 cttctgtttaaggtcatt 25613058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 16278236 - 16278312
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| || |||||||||||||| || ||||||||| ||| |||||||||| || | |||| ||||||| ||||||    
T  16278236 aattcttaatatgtttgtaacatggatagtcattttaaggacaatattaatcatctttactcccatccttgtgtttt 16278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 24042124 - 24042056
Alignment:
Q  137 caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||| |||||||| | || |||||| || |  |||||||||||||||||||||||||||| ||||    
T  24042124 caaaaatcgggttttcaggctatttgatcggactgctccgaaacttccccagaaaatcagaaaaaattc 24042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 37518215 - 37518123
Alignment:
Q  113 gggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||||| |||||||| | ||||||  ||||||     || |||||| ||||  |||||||||||||||||||||||||||| ||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 37518123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 48706061 - 48705870
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||| |||||||||| |||||||||||||||| ||||||| | | ||| ||||| | ||    | |||| | |  |||||||||||||||||||  |||    
T  48706061 ttcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactcggatc 48705962  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatc 194  Q
     || |||||| ||||||||||   |||||| | | ||||||    |||||  | |||||||||| ||| ||||||||||| |||| ||||||    
T  48705961 tttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatcatattgttccgaaactttcccaaaaaatc 48705870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 5731214 - 5731145
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||| ||||||||| ||||||| || ||||||| | ||| ||||||||||||| || || ||||||||    
T  5731214 aattctgaacatgtttataacatggatagtcatttgaaggacaatattaatcttcttagctttcatcctt 5731145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 16278423 - 16278468
Alignment:
Q  14 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 59  Q
    |||||| |||||||||||||| |||||| ||||||||| |||||||    
T  16278423 taatccaaactgtatcagcaccaattctgaacatgtttctaacatg 16278468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 142021 - 141823
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||||||    
T  142021 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttc 141922  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattct 206  Q
    || |||||||||||||| |||||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||||||||||||||||||||||| |||||    
T  141921 tg-tttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattct 141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 27928003 - 27927801
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||    
T  27928003 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcatc 27927904  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||| | ||||||  |||||||    ||||||||||||||  ||||||||||||||| |||||||||||| |    
T  27927903 cttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttccccataaaatcagaaaaaa 27927804  T
Q  203 ttc 205  Q
    |||    
T  27927803 ttc 27927801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 3094786 - 3094984
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||    
T  3094786 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttc 3094885  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||    ||||||||| ||||  |||||||||| |||||||||||| |||| ||||    
T  3094886 tgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctccgaaacttgcccagaaaatcataaaaaattc 3094984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 8885515 - 8885318
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  8885515 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 8885416  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||||||| |||||||| |||||||| | ||||||| |||||||    ||||||||| ||||  |||||||| | |||||||||||||||||    
T  8885415 cttctgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacattcccagaaaatcagaaaa 8885318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 28916876 - 28917074
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||||||||||| ||||||||||||||||    
T  28916876 gattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttc 28916975  T
Q  107 tgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||| |  ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  28916976 tgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttcga-ctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 28917074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 44106320 - 44106510
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||  ||||| |||||||||||||||||||||||||    
T  44106320 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctcatc 44106419  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||    
T  44106420 cttctgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctctgaaacttccccataaaat 44106510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 42280953 - 42280756
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  42280953 ttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttagggacaatattaatcttcctaactctcatc 42280854  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | ||||     ||||||||| ||||  | ||||||||||||||||||||| ||||    
T  42280853 cttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttgatcggattacttcgaaacttccccagaaaatcaaaaaa 42280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 34853427 - 34853627
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||    
T  34853427 cggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 34853526  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 204  Q
    ||||||||||||||||||||| ||||||||  || |||||  ||||||    ||||||||| ||||  ||||||||||||||| |||||||||||| |||    
T  34853527 tctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaacttccccataaaatcagaaaaaatt 34853626  T
Q  205 c 205  Q
    |    
T  34853627 c 34853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 36165900 - 36165697
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || || ||||||  || ||||||||||||| |||||||||||    
T  36165900 ttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctcatc 36165801  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcagg-ttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 201  Q
    |||||||||||||||||||||||||||||||| | ||||| | || ||||   | ||||||||| ||||  ||||||||||||||||||||||||||||     
T  36165800 cttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaa 36165701  T
Q  202 attc 205  Q
    ||||    
T  36165700 attc 36165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 9073601 - 9073803
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||    
T  9073601 ttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatc 9073700  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| ||||||     ||||||||  ||||  |||||||||||| ||||||||||||||| |    
T  9073701 cttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcctcagaaaatcagaaaaaa 9073800  T
Q  203 ttc 205  Q
    |||    
T  9073801 ttc 9073803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 11698378 - 11698176
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  11698378 ttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctcatc 11698279  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||| ||||| |||||||||||  |||||||| ||||||||| |||||||  | ||||||||| || |  |||||||||||||||||||||||||||| |    
T  11698278 cttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttccccagaaaatcagaaaaaa 11698179  T
Q  203 ttc 205  Q
    |||    
T  11698178 ttc 11698176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 40392633 - 40392815
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||    
T  40392633 ttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactcttatc 40392732  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccc 185  Q
     || || |||||||||||||||  |||||||| |||||||||| ||||||||| ||||||||| ||||  |||||||||||||    
T  40392733 tttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 17119941 - 17119744
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  17119941 ttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctcatc 17119842  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||||||||| |||||||||| |||||||| ||||||| | |||||||    ||||||||  ||||  |||||||||||||||| |||| ||||||    
T  17119841 cttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttccccaggaaattagaaaa 17119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 14164119 - 14163917
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||| |||||||||||||||    
T  14164119 ttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctcatc 14164020  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    |||||||||| |||||||||||| |||||||| |||||||    ||||||  | ||||||||| | ||  |||||||| ||||||||||||||||||| |    
T  14164019 cttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctccgaaacctccccagaaaatcagaaaaaa 14163920  T
Q  203 ttc 205  Q
    |||    
T  14163919 ttc 14163917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 40328015 - 40328191
Alignment:
Q  24 tgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtt 123  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  124 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    || |||||||| ||||||||| |||||||    ||||||||| ||||  ||| ||||||||| ||||||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccctagaaaatcagaaaa 40328191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 31519954 - 31519752
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||| || | ||||||| ||| ||||||||||||||||||||  |||    
T  31519954 ttcggattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatc 31519855  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||| |||||| |||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  31519854 cttttgtttttggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccataaaatcagaaaaaa 31519755  T
Q  203 ttc 205  Q
    |||    
T  31519754 ttc 31519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 21004486 - 21004679
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||     |||||| |||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||| ||||||| |||    
T  21004486 ttcggattatataatccg-----tatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatc 21004580  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc-cccagaaaatcagaaaa 200  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||||||||  || |||||||| || | ||||||||||||    
T  21004581 cttttgttttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaacttctccaaaaaaatcagaaaa 21004679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 4259697 - 4259550
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||  || ||||||||||||| ||||||||||||||||||| |||||    
T  4259697 ttcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatc 4259598  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    ||||  |||| | |||||||||  |||||||| |||||| || |||||||    
T  4259597 cttc--ttttcgatcattgttagttgttcttagtcaaaactctggttttc 4259550  T

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Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 16310701 - 16310805
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||     
T  16310701 attatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatgcttcc 16310800  T
Q  108 gtttt 112  Q
    |||||    
T  16310801 gtttt 16310805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 40994889 - 40994983
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||    
T  40994889 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 36980689 - 36980859
Alignment:
Q  26 tatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttac 125  Q
    |||||||||||||| | ||||||||||||||||| ||  |||||||| ||| |||||| ||||| |||||||| |||||||| ||||||||||||||||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  126 atgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
     | |||||| ||||||||| | |||||  | ||||||||| ||||  |||||||||||| |||||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttccacagaaaatcag 36980859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 28423523 - 28423707
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||| |||||| ||||  ||||||||||||||||||||||||||| ||   |||||||  || ||||||||||||||||||||||||||||||    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
     ||||| ||||||| ||  |||||||| |||||||| || |||||  | ||||||||| ||||  ||||||||||  |||||||||    
T  28423623 attttgcgtcattg-tagttgttcttagtcaaaaattagtttttcgggctacttgatcggattactccgaaacttagccagaaaat 28423707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 37248660 - 37248764
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||||||||||||||||||||||| ||||     
T  37248660 attatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcatgcttcc 37248759  T
Q  108 gtttt 112  Q
    |||||    
T  37248760 gtttt 37248764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 6395186 - 6395376
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    |||||||||||  || ||||||||||| |||||  ||| | |||||| |||| ||  |||||||||||| |||||||| ||||||||||||||| |||||    
T  6395186 attatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttct 6395285  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||||| |||||||||||  ||||| || ||||||||| | |||||  | ||||||||| |||| ||| ||||| ||||| |||||||||||    
T  6395286 gttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccctgaaaatcagaa 6395376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 1076659 - 1076849
Alignment:
Q  9 ttatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg 108  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||| || |||||||| || ||    
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatcattttg 1076757  T
Q  109 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||||  |||||||||  |||||||  ||||||||| | |||||  | ||||||||  ||||  | ||||||||||| | ||||| ||||||    
T  1076758 ttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgcttcgaaacttcccaaaaaaattagaaaa 1076849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 36317889 - 36318083
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtt----tgtaacatgaattgtcattttatggagaatattaatcttcctaactct 98  Q
    |||||||||||||||| ||||||||| |||||||||| | ||||||||    ||||||||| ||  |||||||| ||| |||||||||||| ||||||||    
T  36317889 ttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaactct 36317988  T
Q  99 catccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
     ||| |||  ||||||||||||||||  |||||||| ||| ||||  | |||||  | ||||||||| |||  |||| |||||| ||||||||||    
T  36317989 tatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactttcccagaaaat 36318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 34645520 - 34645667
Alignment:
Q  49 tttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggt 148  Q
    ||||||||||  || ||||||||| ||| ||| ||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  149 tttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    ||||  | |||||||||| |||  ||||||| || |||  ||||||||    
T  34645620 tttcgggctacttgatcacattgctccgaaattttccccaaaaatcag 34645667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 7982478 - 7982572
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 100  Q
    ||||||||||||| |||||||||| ||||||||| | |||||||||||||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 33472168 - 33472277
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||| |||| ||||||| ||||| |  ||||| |||||| ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  33472168 ttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcatc 33472267  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  33472268 cttgtgtttt 33472277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 33472379 - 33472484
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||| ||||||| ||||| |||| ||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| ||||||||     
T  33472379 gattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatcatccttg 33472478  T
Q  107 tgtttt 112  Q
    ||||||    
T  33472479 tgtttt 33472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 10833577 - 10833468
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||  |||||| | |||| | |||||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||||    
T  10833577 ttcggatttcataatctggactgcaccagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatc 10833478  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  10833477 cttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 7981618 - 7981804
Alignment:
Q  10 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 109  Q
    |||| |||| |||||||| || |||||||| | ||||||||||||||||| ||  | |||||| ||| ||| ||||  |||||||| |||||||||||||    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  110 tttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    ||||||| |||||||  |||| ||| | ||||||    |||||| | ||||||||| ||||  | |||||||||| | |||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgcttcgaaacttcctccgaaaatcag 7981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 10840817 - 10840625
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||| | |||| ||||| |||||||||||| |   | ||||||||||| ||   || | || ||| |||||||||||||||||||||||||||    
T  10840817 cggattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatcct 10840718  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc-aagatacttgatcagattcttccgaaacttccccagaaaatcagaa 198  Q
    ||||  || |||| ||||||  || ||  |||||||||||||||||||  |  ||||||||||| ||  ||||||||||||||||||||||||||    
T  10840717 tctggattaggtccttgttagttg-tcccactcaaaaatcaggttttcggatctacttgatcag-ttgctccgaaacttccccagaaaatcagaa 10840625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 1374037 - 1374158
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||| ||||||||||| ||||| |||||||| ||| ||||||||||| ||| || ||||  ||| | |  ||||||||| | ||||||||||||    
T  1374037 ttcggattatgtaatccgaactatatcatcacaaattataagcatgtttgtaatatggatagtcagattaagaactatattaatcattctaactctcatc 1374136  T
Q  103 cttctgttttgggtcattgtta 124  Q
    ||| |||||| |||||||||||    
T  1374137 cttatgttttaggtcattgtta 1374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 31234580 - 31234471
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||  ||||||||||   | |||||| |||||| ||||| ||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||    
T  31234580 ttcggattacgtaatccgaacaacaccagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactcccatc 31234481  T
Q  103 cttctgtttt 112  Q
    | | ||||||    
T  31234480 catgtgtttt 31234471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 9845323 - 9845385
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||| |||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtcctt 9845385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 8621697 - 8621606
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactct 98  Q
    ||||||||||| |||||||||||||||||||||| | ||  |||| |||||||| ||  |||||||| ||| |||||||||||| ||||||||    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactct 8621606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 9845490 - 9845573
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 86  Q
    ||||||||| ||||||| |||||  ||||||| |||||||||||||||||||||||| ||  |||||||| ||  |||||||||    
T  9845490 ttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 24627903 - 24627988
Alignment:
Q  27 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||| ||| |||||| ||||||||||||||||  || |||||||||  || |||||||||||||||| || |||||||| ||||||    
T  24627903 atcaacaccaattctgaacatgtttgtaacattgatagtcattttaatgacaatattaatcttcctagctttcatccttgtgtttt 24627988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 24627697 - 24627761
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 93  Q
    |||||| |||||| || |||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  24627697 cagcaccaattctgaatatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 39093605 - 39093745
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| ||| ||||||| || ||||| ||| ||||||||||||||  ||   || ||||  ||  ||||||||||| | || |||||||    
T  39093605 ttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctcatc 39093704  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaat 143  Q
     || |||||| |||||||||||  |||||||| | ||||||    
T  39093705 tttatgttttaggtcattgttaattgttcttagtaaaaaat 39093745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 31234764 - 31234689
Alignment:
Q  30 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||| |||||| |||||||| |||||||| || ||||||||| ||| ||||||||||||| || || ||||||||    
T  31234764 agcaccaattctgaacatgttcgtaacatggatcgtcattttaaggacaatattaatcttcttagctttcatcctt 31234689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 41530812 - 41530881
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    ||||||||||||||||| || ||||||| | ||| |||||||||||||||| || || ||||| ||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttcctagctttcgtccttgtgtttt 41530881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 32504363 - 32504309
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 59  Q
    |||||||||||||  ||||| |||||||||||||| | || ||||||||||||||    
T  32504363 cggattatataatatgaactatatcagcacaaattttgaatatgtttgtaacatg 32504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 7965992 - 7965935
Alignment:
Q  43 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 100  Q
    ||||||||||||||||| || |||| |||| ||| |||| || |||||||||||||||    
T  7965992 aacatgtttgtaacatggatagtcactttaaggacaatactagtcttcctaactctca 7965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7966057 - 7966005
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacat 58  Q
    |||| ||||||| |||||||| || ||||||||| | ||||||||||||||||    
T  7966057 ggataatataattcgaactgtttcggcacaaattttgaacatgtttgtaacat 7966005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 32187926 - 32187724
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  32187926 ttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 32187827  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||| |||||||  ||||||||| |||||||    ||||||||| ||||  |||||||||||||||||||||||||||| |    
T  32187826 cttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaa 32187727  T
Q  203 ttc 205  Q
    |||    
T  32187726 ttc 32187724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 5507516 - 5507713
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  | |||||||||||||  |||||||||     
T  5507516 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactctcatt 5507615  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||  |  |||||||| ||||  ||||||||||||||||||||||||||||    
T  5507616 cttctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttccccagaaaatcagaaaa 5507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 15995170 - 15994968
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||    
T  15995170 ttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaactctcatc 15995071  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
     ||||||||||||||||||||||||||||||| | ||||||  | ||||||   || |||||| ||||  ||||||||||||||| |||||||||||| |    
T  15995070 attctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttccccataaaatcagaaaaaa 15994971  T
Q  203 ttc 205  Q
    |||    
T  15994970 ttc 15994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 41510483 - 41510284
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||    
T  41510483 cggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatga-tagtcattttagggacaatattaatcttcctaactctcatcct 41510385  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 204  Q
    ||||||||||||||||||||| |||||||| | |||||   |||||||  | ||||||||| ||||  ||||||||||||| |||||||||||||| |||    
T  41510384 tctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaatt 41510285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 42894476 - 42894676
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||| ||| |||||||||||||||||||||| ||||    
T  42894476 cggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactctcttcct 42894575  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 204  Q
    ||||||||||||||||||||||||||||||  ||||||||  ||||||    ||||||||| ||||  ||||||||||||||||||||| |||||| |||    
T  42894576 tctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttccccagaaaattagaaaaaatt 42894675  T
Q  205 c 205  Q
    |    
T  42894676 c 42894676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 41203239 - 41203041
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||||||    
T  41203239 gattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactttcatccttc 41203140  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||||||||||| |||||||| | ||||||  | |||||  |  |||||||| ||||  ||||||||||||||||||||| |||||| ||||    
T  41203139 tgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttccccagaaaattagaaaaaattc 41203041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 39447259 - 39447456
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||    
T  39447259 ttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatc 39447358  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||| |||    | ||||||| ||||  || |||||||||| ||||||||||||||    
T  39447359 cttctattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctctgaaacttccctagaaaatcagaaaa 39447456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 44465784 - 44465635
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||| ||| |||||||||||||||||||||||||    
T  44465784 ttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctcatc 44465685  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  44465684 cttctgttttgggtcattgttacctcttcttagtcaaaaatcaggttttc 44465635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 33452500 - 33452303
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||     
T  33452500 ttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatt 33452401  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaaga-tacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||| ||||||||||| ||||||  |||||||| ||||||||| ||||| |  || ||||||||| ||||  |||||||||| |||||||||||||||||    
T  33452400 cttttgttttgggtctttgttatctgttcttagtcaaaaatcgggttt-ctggactacttgatcggattgctccgaaactttcccagaaaatcagaaaa 33452303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 34517201 - 34517395
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||| | |||||||||| || ||||| ||||||||    
T  34517201 ggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttcatcctt 34517300  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     ||||||||||||||||||| |||||||| ||||||||  |||||||   |||||||||| ||||  |||||||||| |||||||| ||||||||    
T  34517301 ttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaacttacccagaaagtcagaaaa 34517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 36875084 - 36875232
Alignment:
Q  5 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 104  Q
    ||||||||||||||| |||||||| |||| |||||||||||| |||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||    
T  36875084 cggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatcct 36875183  T
Q  105 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttca 153  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||    
T  36875184 tctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttca 36875232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 8388752 - 8388909
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||||    
T  8388752 gattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctcatccttc 8388851  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgat 164  Q
     ||||||||||||||||   |||||||| || |||||| ||||||| || ||||||||    
T  8388852 agttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 16750484 - 16750284
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||| ||||||||||||||| |||||||||  |||||||||| ||| || ||||||||| | | ||||||||||||| |||||||||||    
T  16750484 ttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcatc 16750387  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 202  Q
    ||||||||||||||||||||||  |||||||| | ||||||| | |||||    ||||||||| |||| | |||||||||||||||| |||||||||| |    
T  16750386 cttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattgtaccgaaacttccccagacaatcagaaaaaa 16750287  T
Q  203 ttc 205  Q
    |||    
T  16750286 ttc 16750284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 41854956 - 41854764
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||     || ||||||| | ||| |||||||||||||||||||||||||    
T  41854956 ttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaactctcatc 41854862  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||| ||||||||||  |||||||| | ||||| | | ||||   | ||||||||| ||||  || |||||||||||||||||||||||||    
T  41854861 cttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaa 41854764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 25217825 - 25217629
Alignment:
Q  11 atataatccg-aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg- 108  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||||||  ||| ||| |||||||||||||||||| ||||||||     
T  25217825 atataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgt 25217726  T
Q  109 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||  | ||||||||| ||||  ||||| ||||| | |||||||||||||| ||||    
T  25217725 ttttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgacacttctctagaaaatcagaaaaaattc 25217629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 45153844 - 45153708
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||  ||||||||||||||||| || ||||||||||||||||||| || ||||||||| ||| ||||||||||||| |||||||||||||||    
T  45153844 gattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttc 45153745  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaat 143  Q
    ||||||||||||||||||| |||||||| || |||||    
T  45153744 tgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 17474853 - 17474706
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  || ||||||||||||||||||||||||  ||    
T  17474853 ggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcataatt 17474754  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttca 153  Q
    ||||| || | ||||||||| |||||||  ||||||||| ||||||||    
T  17474753 ctgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttca 17474706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 19110068 - 19109879
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    ||||||||||||| |||| |||||||||||||| |||| || ||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||     
T  19110068 gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttt 19109969  T
Q  107 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    | ||||||||||||||||  |||||||| |||||||||  |||||     ||||||||| ||||  ||||||||||| ||||||| ||||    
T  19109968 tattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttcaccagaaattcag 19109879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 36948999 - 36948853
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||| ||||||| || |  |||||| ||| ||||||||||||||||||||| ||||||    
T  36948999 ggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactcttatcctt 36948900  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 152  Q
     |||||||||| |||||||| |||||||| ||||||||  |||||||    
T  36948899 ttgttttgggtaattgttacctgttcttagtcaaaaattgggttttc 36948853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 38308840 - 38308687
Alignment:
Q  53 taacatgaattgtcattttatggagaatattaatcttccta--actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttt 150  Q
    ||||||| |||||||||||||||| ||||||||||||| ||  ||| |||||||||||||||||||| ||||||| |||||||| ||||||||| || ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  151 tcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 205  Q
    ||  | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaattc 38308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 35251032 - 35251221
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    |||||||||||| |||||||| |||||||||||| |   ||||||||| ||| || | || |||| |||  |||||||||||| ||||||  ||||||||    
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  108 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcaga 197  Q
     |||| |||||||||||  |||||||| || |||||| |||||||  | ||||||||||||||  |||||||||| ||||||||||||||    
T  35251132 attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctccgaaactttcccagaaaatcaga 35251221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 30763807 - 30763943
Alignment:
Q  64 gtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttga 163  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||| ||||||||| | ||||   |  ||||||    
T  30763807 gtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaacttga 30763906  T
Q  164 tcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    || ||||  |||||||||||| |||||||||||||||    
T  30763907 tcggattgctccgaaacttcctcagaaaatcagaaaa 30763943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 26228239 - 26228358
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    ||||||||||| ||||||||||||||| |||||| ||| |||||||  |||||||| |||||||||  |||||| || ||||||||||||||| ||||||    
T  26228239 atattaatcttgctaactctcatccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaa 26228338  T
Q  179 acttccccagaaaatcagaa 198  Q
    ||||||||| ||||||||||    
T  26228339 acttccccataaaatcagaa 26228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 33440546 - 33440374
Alignment:
Q  23 ctgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgt 122  Q
    |||||||| |||||||||| ||||||||||| |||||||   |||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  33440546 ctgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcattgt 33440448  T
Q  123 tacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 196  Q
    |   ||||| |  | ||||||  |||| |||   ||||||| ||| ||  ||||||||||||||||||||||||    
T  33440447 tcactgttcatggtaaaaaatacggttatcagactacttgaccaggttgctccgaaacttccccagaaaatcag 33440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 45293813 - 45293930
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||  |||||||| ||||||||| |||||||  | |||||||||| |||  || |||    
T  45293813 atattaatcttcctaactctcatctttctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaa 45293912  T
Q  179 acttccccagaaaatcag 196  Q
    |||| |||| ||||||||    
T  45293913 actttcccataaaatcag 45293930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 17766886 - 17766777
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||| ||||||  ||||  |||| ||| |||| | ||||||||||||||||  || ||||||||| ||| |||||||||||||||||||||||||    
T  17766886 ttcggattacataatctaaacttcatcaacaccaattttgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatc 17766787  T
Q  103 cttctgtttt 112  Q
    ||| ||||||    
T  17766786 cttgtgtttt 17766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 41204029 - 41204138
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||| |||||||| ||||||||||| |||||||||| |||||||||||||| |||||  | |||||| ||   |||||||| |||||||||| ||||    
T  41204029 ttcggataatataatctgaactgtatcaacacaaattctgaacatgtttgtaacttgaatattgattttaagggttatattaattttcctaactcccatc 41204128  T
Q  103 cttctgtttt 112  Q
     |||||||||    
T  41204129 attctgtttt 41204138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 42478916 - 42479037
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 178  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||   ||||| | ||||||||   ||||||  | ||||||||||||||  || |||    
T  42478916 atattaatcttcctaactctcatccttatgttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaa 42479015  T
Q  179 acttccccagaaaatcagaaaa 200  Q
    ||||||||| ||||||| ||||    
T  42479016 acttccccaaaaaatcataaaa 42479037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 38065543 - 38065432
Alignment:
Q  94 actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 193  Q
    |||||||| |||||||||||||| |||||||| |||||||| | |||||| || |||||| | || |||||| ||||  |||||||||| |||| |||||    
T  38065543 actctcattcttctgttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaat 38065444  T
Q  194 cagaaaatattc 205  Q
    ||||||| ||||    
T  38065443 cagaaaaaattc 38065432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 32069286 - 32069099
Alignment:
Q  12 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttt 111  Q
    ||||||| | ||||||||| || ||||||| |   |||||||| |||| || | || |||| |||  |||||| |||||||| ||||||| ||| |||||    
T  32069286 tataatctgcactgtatcaacataaattctgagtctgtttgtatcatggatagccaatttaaggaccatattagtcttcctagctctcatacttatgttt 32069187  T
Q  112 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    | |||||||| || ||||||| |||||||||||  ||||||| | ||||| ||||||||  || ||||||| |||| ||||| ||||||    
T  32069186 taggtcattgatagatgttctcactcaaaaatcttgttttcaggctacttaatcagattgctctgaaactttccca-aaaattagaaaa 32069099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 34519561 - 34519485
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| ||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  34519561 aattctgaacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatccttatgtttt 34519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 38066725 - 38066633
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 100  Q
    ||||||||| |||||| |||| | ||||||||||||| |||||||||| ||| || ||||||||| ||| ||||||||||||| | |||||||    
T  38066725 attatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttcattactctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 34817215 - 34817326
Alignment:
Q  20 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 119  Q
    ||||||||||||||| |||||| ||| ||||||||||||| ||   || | || |||  |||||||||||||||||| |||||||  |||||| ||||||    
T  34817215 gaactgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcatcctcatgttttaggtcat 34817314  T
Q  120 tgttacatgttc 131  Q
    ||||| ||||||    
T  34817315 tgttagatgttc 34817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 9847236 - 9847160
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||| ||||| |||||||| ||||||    
T  9847236 aattctgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatccttgtgtttt 9847160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 37773829 - 37773735
Alignment:
Q  47 tgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaa 141  Q
    ||||||||||||| || | || |||| |||  || |||||||| |||||||||||||||||||||| | |||||||||  |||||||| ||||||    
T  37773829 tgtttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaa 37773735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 9847444 - 9847368
Alignment:
Q  36 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||||||||| |||||||| |  || ||||||||| ||| ||||||||||||||||| | |||||||| ||||||    
T  9847444 aattctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaaatttcatccttgtgtttt 9847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 33833856 - 33833969
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 106  Q
    |||||||||||||||||||||||| |||||||| | | |||||   || |||| || | ||  ||| |||  |||||||| || ||||||| ||||||||    
T  33833856 gattatataatccgaactgtatcatcacaaattatgagcatgt---tagcatggatagccagattaaggaccatattaatgtttctaactc-catccttc 33833951  T
Q  107 tgttttgggtcattgtta 124  Q
    |||||| |||||||||||    
T  33833952 tgttttaggtcattgtta 33833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 9693521 - 9693562
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcatt 120  Q
    |||||||||||  ||||||||||||||||||||| |||||||    
T  9693521 atattaatctttttaactctcatccttctgttttaggtcatt 9693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 45293743 - 45293776
Alignment:
Q  8 attatataatccgaactgtatcagcacaaattct 41  Q
    ||||||||||| ||||||||||||||||||||||    
T  45293743 attatataatctgaactgtatcagcacaaattct 45293776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 3457 - 3259
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    |||||||||||||||| |||||||||| || |||||||||||||||||||||||||  ||  |||||||| ||| ||||||||||||| |||||||||||    
T  3457 ttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctcatc 3358  T
Q  103 cttctgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    ||||||||||||||||||||||| |||||||| |  |||||||||||||||  | ||||||||||||||  || |||||||||||||||||||||||||    
T  3357 cttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaa 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 9559 - 9365
Alignment:
Q  3 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 102  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||| ||||||||| ||  ||||| |||||    
T  9559 ttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcatc 9460  T
Q  103 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcaga 197  Q
     ||||||||||||||||||||||||||||||| | ||||||| | |||||    ||||||||| ||||  || ||||||| || |||||||||||    
T  9459 attctgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatcggattgctctgaaacttgcctagaaaatcaga 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 140620 - 140779
Alignment:
Q  41 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaa 140  Q
    ||||||||||||||||||  || ||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  141 aatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
    |||| ||||||||   ||||||||| ||||  ||||||||||||||||||||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaa 140779  T

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Target: scaffold0182 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 23228 - 23303
Alignment:
Q  32 cacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 107  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 23303  T

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Target: scaffold0564 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 4471 - 4665
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    ||||||||||||| |||||||||| ||||||||| | ||| ||||||||| ||  || |||||||||  ||  |||||||||||| ||||  ||||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  106 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 200  Q
     |||||  |||||||||||  ||||| || || |||||  ||||||  || || |||||| ||||  ||||||||||  ||||||||||| ||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctccgaaacttggccagaaaatcataaaa 4665  T

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Target: scaffold0006 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 60028 - 59938
Alignment:
Q  7 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 97  Q
    |||||||||||  |||||||| ||||||||||| | ||||||||||||||||  || |||||||||  || ||||||||||||||||||||    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc 59938  T

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Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 59472 - 59551
Alignment:
Q  18 ccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 97  Q
    ||||||| |||||| ||||||| ||||||||||||| ||||| || ||||||||| ||| |||||||||||| |||||||    
T  59472 ccgaactatatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 205842 - 205759
Alignment:
Q  29 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 112  Q
    |||||| |||||| ||||||||||||||||   | ||||||||| ||| |||||||||||||||| || |||||||| ||||||    
T  205842 cagcaccaattctgaacatgtttgtaacattggtagtcattttaaggataatattaatcttcctagctttcatccttgtgtttt 205759  T

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Target: scaffold0466 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 8794 - 8911
Alignment:
Q  6 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 105  Q
    |||||||||| || |||| |||||| |||||||  | | | ||||||||||||| || | |||||||||||  |||||| || ||||||| | |||||||    
T  8794 ggattatatattctgaaccgtatcatcacaaatattgagcttgtttgtaacatggatagccattttatggaacatattattcatcctaac-cccatcctt 8892  T
Q  106 ctgttttgggtcattgtta 124  Q
     |||||| | |||||||||    
T  8893 gtgttttagatcattgtta 8911  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 2049 - 2004
Alignment:
Q  79 atattaatcttcctaactctcatccttctgttttgggtcattgtta 124  Q
    ||||||||||||||||||| |||||||||| ||  |||||||||||    
T  2049 atattaatcttcctaactcacatccttctgattaaggtcattgtta 2004  T

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