View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3062_low_54 (Length: 227)

Name: NF3062_low_54
Description: NF3062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3062_low_54
NF3062_low_54
[»] chr6 (1 HSPs)
chr6 (169-212)||(32682954-32682997)


Alignment Details
Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 32682954 - 32682997
Alignment:
169 ggcaagttttttcatgaaatgttaacaatgttaatgggggctga 212  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||    
32682954 ggcaagttttttcatgaaatgttaacaaagtttatggggtctga 32682997  T

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