View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3063_high_1 (Length: 720)

Name: NF3063_high_1
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3063_high_1
NF3063_high_1
[»] scaffold0234 (4 HSPs)
scaffold0234 (501-708)||(2321-2528)
scaffold0234 (501-708)||(11212-11419)
scaffold0234 (409-465)||(2564-2620)
scaffold0234 (409-465)||(11455-11511)
[»] chr4 (65 HSPs)
chr4 (501-708)||(19926760-19926967)
chr4 (204-410)||(7142831-7143037)
chr4 (501-708)||(26970463-26970670)
chr4 (501-708)||(55612683-55612890)
chr4 (501-708)||(5707320-5707527)
chr4 (501-708)||(26963640-26963847)
chr4 (501-708)||(5713948-5714155)
chr4 (501-708)||(10621333-10621540)
chr4 (501-708)||(868597-868804)
chr4 (501-708)||(10628412-10628619)
chr4 (503-708)||(18262214-18262419)
chr4 (503-708)||(28393134-28393339)
chr4 (503-708)||(4426604-4426808)
chr4 (521-708)||(18269093-18269280)
chr4 (513-708)||(8845215-8845410)
chr4 (513-708)||(8858179-8858374)
chr4 (18-160)||(7142648-7142793)
chr4 (501-616)||(12357136-12357251)
chr4 (510-708)||(20311300-20311499)
chr4 (513-708)||(10677555-10677747)
chr4 (513-708)||(10891195-10891387)
chr4 (510-708)||(5668125-5668324)
chr4 (50-410)||(5160519-5160891)
chr4 (503-707)||(5616215-5616421)
chr4 (510-708)||(35223579-35223767)
chr4 (49-163)||(5214320-5214434)
chr4 (317-410)||(4841722-4841815)
chr4 (204-410)||(5182929-5183132)
chr4 (260-410)||(5214548-5214695)
chr4 (204-406)||(4856223-4856422)
chr4 (409-465)||(5713856-5713912)
chr4 (409-465)||(19927003-19927059)
chr4 (409-465)||(26963548-26963604)
chr4 (409-465)||(26970371-26970427)
chr4 (407-465)||(5707226-5707284)
chr4 (317-410)||(5196445-5196538)
chr4 (409-465)||(10621576-10621632)
chr4 (409-465)||(12357044-12357100)
chr4 (411-465)||(868507-868561)
chr4 (408-465)||(55612593-55612650)
chr4 (409-465)||(10628655-10628711)
chr4 (409-465)||(17142372-17142428)
chr4 (408-463)||(28393380-28393435)
chr4 (527-708)||(21454137-21454319)
chr4 (112-177)||(5196226-5196291)
chr4 (409-465)||(4426847-4426903)
chr4 (111-163)||(4841989-4842041)
chr4 (409-465)||(18268976-18269032)
chr4 (550-617)||(39074278-39074346)
chr4 (112-171)||(5182820-5182879)
chr4 (112-177)||(4856466-4856531)
chr4 (204-352)||(5173597-5173742)
chr4 (539-700)||(56516094-56516255)
chr4 (424-465)||(5668371-5668412)
chr4 (416-465)||(55992680-55992729)
chr4 (111-163)||(5173481-5173533)
chr4 (425-465)||(18262136-18262176)
chr4 (638-690)||(39074218-39074270)
chr4 (551-610)||(11161913-11161972)
chr4 (411-465)||(20311207-20311261)
chr4 (539-707)||(30040750-30040919)
chr4 (42-87)||(4842056-4842101)
chr4 (42-87)||(5173421-5173466)
chr4 (424-465)||(8845125-8845166)
chr4 (424-465)||(8858089-8858130)
[»] chr1 (25 HSPs)
chr1 (501-708)||(18252030-18252237)
chr1 (501-708)||(18532514-18532721)
chr1 (501-708)||(27131409-27131616)
chr1 (503-708)||(21171233-21171438)
chr1 (503-708)||(27310577-27310782)
chr1 (503-708)||(16359035-16359240)
chr1 (510-708)||(36816633-36816831)
chr1 (501-708)||(3855919-3856126)
chr1 (501-708)||(22657221-22657429)
chr1 (510-708)||(27277557-27277753)
chr1 (535-708)||(12006539-12006712)
chr1 (535-708)||(12014284-12014457)
chr1 (513-708)||(9917918-9918106)
chr1 (409-465)||(18251936-18251992)
chr1 (409-465)||(18532757-18532813)
chr1 (407-465)||(27310821-27310879)
chr1 (407-465)||(16359280-16359338)
chr1 (409-465)||(21171479-21171535)
chr1 (409-461)||(22657469-22657521)
chr1 (513-576)||(30720625-30720688)
chr1 (531-608)||(3403248-3403325)
chr1 (531-608)||(3443494-3443571)
chr1 (417-462)||(36816881-36816926)
chr1 (409-465)||(3856164-3856220)
chr1 (408-465)||(27131652-27131705)
[»] chr7 (25 HSPs)
chr7 (501-708)||(29327784-29327991)
chr7 (501-708)||(11536062-11536269)
chr7 (501-708)||(11542980-11543187)
chr7 (503-708)||(15152445-15152650)
chr7 (503-708)||(15148144-15148349)
chr7 (503-708)||(18561009-18561214)
chr7 (503-708)||(12750828-12751033)
chr7 (510-704)||(12738545-12738739)
chr7 (503-708)||(18257842-18258047)
chr7 (510-689)||(13392160-13392338)
chr7 (523-708)||(2364917-2365101)
chr7 (534-693)||(7396221-7396381)
chr7 (510-691)||(39111822-39112002)
chr7 (409-465)||(2653275-2653331)
chr7 (409-465)||(11543223-11543279)
chr7 (409-465)||(12738443-12738499)
chr7 (409-465)||(11536305-11536361)
chr7 (409-465)||(12750733-12750789)
chr7 (409-465)||(15152350-15152406)
chr7 (409-464)||(29327690-29327745)
chr7 (409-465)||(15148049-15148105)
chr7 (575-618)||(3132748-3132791)
chr7 (551-616)||(10234179-10234244)
chr7 (409-464)||(13392030-13392085)
chr7 (408-465)||(18258087-18258144)
[»] chr3 (51 HSPs)
chr3 (501-708)||(6110064-6110271)
chr3 (501-708)||(10572592-10572799)
chr3 (510-708)||(17781118-17781316)
chr3 (503-708)||(16482483-16482688)
chr3 (501-708)||(15600884-15601091)
chr3 (501-708)||(15607429-15607636)
chr3 (503-708)||(18522665-18522870)
chr3 (504-708)||(13211305-13211509)
chr3 (501-708)||(13248607-13248814)
chr3 (501-708)||(15357586-15357793)
chr3 (510-708)||(10579355-10579553)
chr3 (503-708)||(18519980-18520182)
chr3 (510-708)||(19089745-19089943)
chr3 (501-708)||(8490488-8490702)
chr3 (520-708)||(15342219-15342407)
chr3 (503-708)||(17200184-17200389)
chr3 (503-708)||(13516813-13517018)
chr3 (510-708)||(32056900-32057098)
chr3 (501-662)||(18640792-18640953)
chr3 (510-708)||(1647521-1647723)
chr3 (521-689)||(16200145-16200313)
chr3 (501-693)||(29924971-29925163)
chr3 (501-693)||(29974124-29974316)
chr3 (521-689)||(16200451-16200619)
chr3 (510-708)||(24253388-24253587)
chr3 (607-708)||(17136465-17136566)
chr3 (503-565)||(18534758-18534820)
chr3 (408-465)||(8490395-8490452)
chr3 (409-465)||(6109972-6110028)
chr3 (409-465)||(13248515-13248571)
chr3 (407-465)||(18640989-18641047)
chr3 (409-465)||(13211211-13211267)
chr3 (409-465)||(17136137-17136193)
chr3 (408-459)||(10579603-10579654)
chr3 (409-465)||(15607672-15607729)
chr3 (408-465)||(16482727-16482783)
chr3 (503-548)||(18510924-18510969)
chr3 (409-465)||(15351237-15351293)
chr3 (409-465)||(15357829-15357885)
chr3 (409-465)||(17200427-17200483)
chr3 (409-465)||(18519885-18519941)
chr3 (409-459)||(10572840-10572890)
chr3 (409-465)||(15601127-15601184)
chr3 (409-465)||(1647768-1647824)
chr3 (409-465)||(13516719-13516775)
chr3 (409-465)||(17781358-17781414)
chr3 (409-465)||(19089985-19090041)
chr3 (409-465)||(32057144-32057200)
chr3 (409-465)||(18510829-18510885)
chr3 (409-465)||(18522570-18522626)
chr3 (417-465)||(18534671-18534719)
[»] scaffold0390 (4 HSPs)
scaffold0390 (501-708)||(6934-7141)
scaffold0390 (501-708)||(13950-14157)
scaffold0390 (408-465)||(14193-14250)
scaffold0390 (409-465)||(7177-7233)
[»] chr8 (18 HSPs)
chr8 (501-708)||(21940665-21940872)
chr8 (503-708)||(22171491-22171694)
chr8 (510-708)||(6094132-6094330)
chr8 (503-702)||(28554885-28555084)
chr8 (510-708)||(24642658-24642856)
chr8 (510-634)||(24636863-24636987)
chr8 (513-705)||(38232380-38232570)
chr8 (408-465)||(21940572-21940629)
chr8 (409-465)||(22070108-22070164)
chr8 (407-465)||(6094029-6094087)
chr8 (531-692)||(32872857-32873019)
chr8 (409-465)||(22171396-22171452)
chr8 (409-461)||(24642556-24642608)
chr8 (409-465)||(28554791-28554847)
chr8 (522-705)||(2375027-2375208)
chr8 (539-602)||(10920234-10920297)
chr8 (408-446)||(24636604-24636642)
chr8 (597-708)||(14983920-14984030)
[»] chr6 (30 HSPs)
chr6 (501-708)||(29308890-29309097)
chr6 (501-708)||(29315850-29316057)
chr6 (503-708)||(16566320-16566525)
chr6 (501-708)||(27381252-27381459)
chr6 (501-708)||(27471635-27471842)
chr6 (503-708)||(17684469-17684674)
chr6 (501-708)||(17691440-17691647)
chr6 (503-708)||(188977-189182)
chr6 (503-708)||(25537159-25537364)
chr6 (503-708)||(11651725-11651930)
chr6 (503-708)||(13359269-13359474)
chr6 (540-708)||(20553587-20553755)
chr6 (524-708)||(27925772-27925961)
chr6 (520-693)||(8509941-8510115)
chr6 (411-465)||(17691683-17691737)
chr6 (539-708)||(17850495-17850663)
chr6 (409-465)||(27381495-27381551)
chr6 (409-465)||(27471878-27471934)
chr6 (409-465)||(29308798-29308854)
chr6 (409-465)||(29315758-29315814)
chr6 (407-463)||(11651628-11651684)
chr6 (409-465)||(17684712-17684768)
chr6 (539-707)||(20736604-20736773)
chr6 (409-465)||(25537405-25537461)
chr6 (510-563)||(31258065-31258118)
chr6 (424-465)||(13359512-13359553)
chr6 (417-465)||(16566563-16566611)
chr6 (436-465)||(189221-189250)
chr6 (424-465)||(16394484-16394525)
chr6 (517-582)||(22259925-22259990)
[»] chr2 (14 HSPs)
chr2 (501-708)||(21330248-21330455)
chr2 (520-708)||(18796525-18796713)
chr2 (510-708)||(18619814-18620011)
chr2 (510-646)||(19692598-19692734)
chr2 (566-693)||(20977957-20978084)
chr2 (535-708)||(36270199-36270373)
chr2 (409-465)||(21330493-21330549)
chr2 (535-708)||(18822115-18822290)
chr2 (409-465)||(19692773-19692829)
chr2 (537-692)||(36802664-36802820)
chr2 (621-708)||(12098618-12098705)
chr2 (621-708)||(18852059-18852146)
chr2 (543-693)||(24471643-24471792)
chr2 (639-708)||(22183483-22183552)
[»] scaffold0220 (2 HSPs)
scaffold0220 (501-708)||(18288-18495)
scaffold0220 (408-465)||(18195-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (501-708)||(7107-7314)
scaffold0433 (409-465)||(7015-7071)
[»] chr5 (20 HSPs)
chr5 (501-708)||(24695466-24695673)
chr5 (501-708)||(18569863-18570070)
chr5 (503-708)||(19714498-19714703)
chr5 (510-708)||(19707218-19707416)
chr5 (510-689)||(27347497-27347675)
chr5 (513-708)||(22547016-22547211)
chr5 (501-610)||(39537962-39538071)
chr5 (513-686)||(17285754-17285927)
chr5 (567-708)||(18807034-18807175)
chr5 (614-706)||(39538701-39538793)
chr5 (513-686)||(17298907-17299080)
chr5 (409-465)||(24695709-24695765)
chr5 (510-610)||(31886540-31886640)
chr5 (408-465)||(19714742-19714799)
chr5 (407-465)||(27347722-27347780)
chr5 (409-465)||(19707462-19707518)
chr5 (527-617)||(33477389-33477479)
chr5 (424-465)||(18570108-18570149)
chr5 (409-464)||(39537870-39537925)
chr5 (551-619)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (501-708)||(993-1200)
scaffold0657 (409-465)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (501-708)||(25990-26197)
scaffold0186 (409-464)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (503-708)||(5531-5736)
scaffold0063 (417-465)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (503-684)||(230365-230545)
scaffold0008 (407-465)||(230584-230642)
[»] scaffold0176 (2 HSPs)
scaffold0176 (501-565)||(8446-8510)
scaffold0176 (409-465)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (409-465)||(23769-23825)
[»] scaffold0326 (1 HSPs)
scaffold0326 (409-465)||(16523-16579)
[»] scaffold0637 (1 HSPs)
scaffold0637 (407-465)||(8942-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (409-465)||(41-97)
[»] scaffold0170 (1 HSPs)
scaffold0170 (409-461)||(5878-5930)
[»] scaffold0565 (2 HSPs)
scaffold0565 (411-465)||(10202-10256)
scaffold0565 (520-551)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (408-445)||(1-38)
[»] scaffold0032 (1 HSPs)
scaffold0032 (530-602)||(92194-92267)


Alignment Details
Target: scaffold0234 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 204 - 410
Target Start/End: Original strand, 7142831 - 7143037
Alignment:
Q  204 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142831 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggttgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 7142930  T
Q  304 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142931 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 7143030  T
Q  404 ctctctg 410  Q
    |||||||    
T  7143031 ctctctg 7143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  703 gatgat 708  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  703 gatgat 708  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  703 gatgat 708  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 521 - 708
Target Start/End: Original strand, 18269093 - 18269280
Alignment:
Q  521 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18269093 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 18269192  T
Q  621 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269193 actattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 513 - 708
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 513 - 708
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 7142648 - 7142793
Alignment:
Q  18 caaagattgtaatagtttaaacaccttgatcctctccaacaactttctaagtggtaatattcctaaattttatatttc---aatgtatttgaaaacttta 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||  |||||||    
T  7142648 caaagattgtgatagtttaaacaccttgatcctctccaacaactttctaagtggtaatattcctaaattttatatttcaataatgtatttgggaacttta 7142747  T
Q  115 tttctcaataataacaactttagtggaacactggaagatgtatttg 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7142748 tttctcaataataacaactttggtggaacactggaagatgtatttg 7142793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 501 - 616
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  601 accccattaaacataa 616  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 510 - 708
Target Start/End: Original strand, 20311300 - 20311499
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccatt 608  Q
    |||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| |||||||||||||||||||||||||    
T  20311300 ttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccatt 20311399  T
Q  609 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||||| ||| || | |||||||  || |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||    
T  20311400 aaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatgat 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 513 - 708
Target Start/End: Complemental strand, 10677747 - 10677555
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10677747 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10677649  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10677648 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10677555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 513 - 708
Target Start/End: Complemental strand, 10891387 - 10891195
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10891387 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10891289  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10891288 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 5668324 - 5668125
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| |||||||    
T  5668324 ttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-cccatta 5668226  T
Q  610 aacataaggaaactattctcaaag--tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 707  Q
    ||   ||||| | |||||| ||||  |||  ||||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| | ||||| |||||    
T  5668225 aatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccgatga 5668126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 50 - 410
Target Start/End: Original strand, 5160519 - 5160891
Alignment:
Q  50 tctccaacaactttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactgga 149  Q
    ||||| ||||||||||||||||||||||||| ||||||| || || |  |    |||||| ||||||||| |||||||||||||||||||||||||| ||    
T  5160519 tctccgacaactttctaagtggtaatattcccaaattttgtaatttaggga---tgaaaaatttatttcttaataataacaactttagtggaacacttga 5160615  T
Q  150 agatgtatttggaagcaatacaatattatatttgttgtccatatccaa-----------------caatatctagttcaattgggatgttttcaaacctg 232  Q
    ||||||||| |||| |||||||  ||||   ||  | |||||||||||                 ||||  ||||||||||||||| |||||| ||| ||    
T  5160616 agatgtattgggaaacaatacagaattagcatttctatccatatccaataattcattctcaggcacaattcctagttcaattgggacgttttctaacatg 5160715  T
Q  233 ctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattg-atctttct-caaaa 330  Q
      || ||||   |||  ||||||||| ||||||||||||||||| |||| |   ||||| |||||||  | ||||||| || ||| |||||||| |||||    
T  5160716 gaagtccttatcatgtctgaaaatctattagaaggtgagatccctattgag---ttttccaacatgttcagtcttgaa-atgttggatctttcttcaaaa 5160811  T
Q  331 caagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 410  Q
    |||||||| |||||||||||||  ||||||||||||||    ||||| | ||||||||||||||||||||||||||||||    
T  5160812 caagttaaatggatcaatcccacctttaagtagtttgacttctctaaagttcttgtatttgcaaaagaatgatctctctg 5160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 503 - 707
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  701 ctgatga 707  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 510 - 708
Target Start/End: Original strand, 35223579 - 35223767
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          | | |    
T  35223579 ttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cgtaa 35223668  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||  ||||| | |||||| ||||||| ||||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  35223669 aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatgat 35223767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 5214320 - 5214434
Alignment:
Q  49 ctctccaacaactttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactgg 148  Q
    ||||||||||||||||||  ||| || |||||||||||||||| ||| ||| || || ||  |||||||||||||||||||||||||||||||||||| |    
T  5214320 ctctccaacaactttctacatgggaacattcctaaattttataattccatgaatgtggaatttttatttctcaataataacaactttagtggaacacttg 5214419  T
Q  149 aagatgtatttggaa 163  Q
    |||||||||| ||||    
T  5214420 aagatgtattgggaa 5214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 317 - 410
Target Start/End: Complemental strand, 4841815 - 4841722
Alignment:
Q  317 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 410  Q
    ||||||||||||||||||||||||||| |||||||| | || |||||||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  4841815 gatctttctcaaaacaagttaattggagcaatcccaaagttgagtagttttaaatatctaaggttcttgtatttgcaacagaatgatctctctg 4841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 410
Target Start/End: Original strand, 5182929 - 5183132
Alignment:
Q  204 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 303  Q
    ||||||||||||||||||||||  |  ||| || ||||| ||||   | |||||| ||||||||||||||||| |||| |||   ||| |||||| | ||    
T  5182929 ctagttcaattgggatgttttctgatatgcaagtccttcttatgtccggaaatctattagaaggtgagatccctattgagat---ttccaacatggccat 5183025  T
Q  304 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 402  Q
    |||| || || ||| ||||||||||||||||||||| |||||| |||||| | || |||||||||| |  ||||||| |||||||||||||| |||||||    
T  5183026 tcttcaa-atgttggatctttctcaaaacaagttaaatggatcgatcccaaagttcagtagtttgacatctctaaggttcttgtatttgcaatagaatga 5183124  T
Q  403 tctctctg 410  Q
    ||||||||    
T  5183125 tctctctg 5183132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 260 - 410
Target Start/End: Original strand, 5214548 - 5214695
Alignment:
Q  260 ttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaa 359  Q
    ||||||||||||||||| |||| |||   ||| |||||||| | |||| ||  | | |||||||||||||||||||||||||||||||||||| | ||||    
T  5214548 ttagaaggtgagatccctattgagat---ttccaacatgtcaagtcttaaaattctggatctttctcaaaacaagttaattggatcaatcccaaagttaa 5214644  T
Q  360 gtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 410  Q
    || |||||| |  ||| ||| |||||||||||||||||||| |||||||||    
T  5214645 gtggtttgacagttcttaggttcttgtatttgcaaaagaataatctctctg 5214695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 204 - 406
Target Start/End: Complemental strand, 4856422 - 4856223
Alignment:
Q  204 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 303  Q
    ||||||||||||||| |||||| ||| || |  |||||  ||||  ||||||||  ||||||||||||||||| |||| |||   ||| |||||||| |     
T  4856422 ctagttcaattgggaagttttctaacatggtttcccttgttatgtctgaaaatcaattagaaggtgagatccctattgagat---ttccaacatgtccag 4856326  T
Q  304 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 402  Q
    |||| | ||| ||| |||||||||||||||||||| ||||| |||||||| | |||||| |||||| |  ||| ||| |||||||||||||||||||| |    
T  4856325 tcttta-tattttggatctttctcaaaacaagttagttggagcaatcccaaagttaagtggtttgacagttcttaggttcttgtatttgcaaaagaataa 4856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 5707226 - 5707284
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5707226 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 410
Target Start/End: Original strand, 5196445 - 5196538
Alignment:
Q  317 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 410  Q
    |||||||||||||||||||||| |||||||||||||  ||||||| ||||||    ||||||| |||||||||||||| |||||| ||||||||    
T  5196445 gatctttctcaaaacaagttaaatggatcaatcccacctttaagtggtttgactcttctaaggttcttgtatttgcaagagaatggtctctctg 5196538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  411 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 55612593 - 55612650
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55612593 ctgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 28393435 - 28393380
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 463  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  28393435 ctgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 708
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  527 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 625  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  626 tctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    | | ||| ||||  ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 5196226 - 5196291
Alignment:
Q  112 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 177  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  5196226 ttatttcttaataataacaactttagtggaacacttgaagatgtattaggaaataatacaagatta 5196291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 4842041 - 4841989
Alignment:
Q  111 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 163  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  4842041 tttatttctcaataataacaactttagtggaacacttgatgatgtattgggaa 4841989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 550 - 617
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  550 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 617  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 5182820 - 5182879
Alignment:
Q  112 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaataca 171  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| | || |||||||    
T  5182820 ttatttcttaataataacaactttagtggaacacttgaagatgtattggaaaacaataca 5182879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 4856531 - 4856466
Alignment:
Q  112 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 177  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  4856531 ttattgctcagtaataacaactttagtggaacacttgaagatgtattgggaaataatacaagatta 4856466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 204 - 352
Target Start/End: Original strand, 5173597 - 5173742
Alignment:
Q  204 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 303  Q
    |||||||||||||||||||||| ||| ||   | ||||| ||||  | ||||||  ||||||||| ||||||| |||| |||   ||| |||||||| |     
T  5173597 ctagttcaattgggatgttttctaacatgtatgtccttcttatgtctaaaaatcaattagaaggtcagatccctattgagat---ttccaacatgtccag 5173693  T
Q  304 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatccca 352  Q
    |||| | ||| ||| |||||||||||||||||||||||||| ||||||||    
T  5173694 tcttta-tattttggatctttctcaaaacaagttaattggagcaatccca 5173742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 700
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  539 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaagtatc 637  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  638 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
      |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  416 ataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 5173481 - 5173533
Alignment:
Q  111 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 163  Q
    |||||| || |||||||||||||||||||||||||| || |||||||| ||||    
T  5173481 tttattactgaataataacaactttagtggaacacttgatgatgtattgggaa 5173533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 465
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  425 aatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 638 - 690
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  638 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 690  Q
    ||||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  551 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 610  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  411 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 707
Target Start/End: Complemental strand, 30040919 - 30040750
Alignment:
Q  539 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 636  Q
    ||||||||| |||||||||| |||| ||| |||| | | ||||||| | |||||||  |||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  637 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 707  Q
    |  ||||||||| ||| |  ||| |||||||  | |||||||| ||||||||||||||  |||||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatga 30040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 4842101 - 4842056
Alignment:
Q  42 cttgatcctctccaacaactttctaagtggtaatattcctaaattt 87  Q
    |||||| ||||||||||||| |||| |||| |||||||||||||||    
T  4842101 cttgattctctccaacaactctctatgtgggaatattcctaaattt 4842056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 5173421 - 5173466
Alignment:
Q  42 cttgatcctctccaacaactttctaagtggtaatattcctaaattt 87  Q
    |||||| ||||||||||||| |||| |||| |||||||||||||||    
T  5173421 cttgattctctccaacaactctctacgtgggaatattcctaaattt 5173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 8845125 - 8845166
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845125 taatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 8858089 - 8858130
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858089 taatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  703 gatgat 708  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  703 gatgat 708  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  703 gatgat 708  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 36816831 - 36816633
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||    
T  36816831 ttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccgtta 36816732  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  36816731 aacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatgat 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  501 acaaggcaattctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 599  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  600 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 699  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  700 actgatgat 708  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 27277753 - 27277557
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||   |||    
T  27277753 ttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt-tta 27277656  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    | |  || || | |||||| |||||||||||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  27277655 accgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatgat 27277557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 535 - 708
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  535 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 634  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  635 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    || ||||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 535 - 708
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  535 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 634  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  635 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 513 - 708
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||| | |||||| ||| ||||  |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 27310879 - 27310821
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27310879 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 16359338 - 16359280
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||    
T  16359338 tctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 461  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 513 - 576
Target Start/End: Complemental strand, 30720688 - 30720625
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 576  Q
    ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720688 tttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 608
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  531 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 608  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 608
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  531 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 608  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  417 taagccataatagccaatctatattgattgggtttggctttgtatc 462  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| || ||| |||||||||||| || ||||||||||||| ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 27131705 - 27131652
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| |||||||||||||||     ||||||||||||||||||||||    
T  27131705 ctgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  703 gatgat 708  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  703 gatgat 708  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  703 gatgat 708  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  703 gatgat 708  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 510 - 704
Target Start/End: Original strand, 12738545 - 12738739
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||   |||    
T  12738545 ttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttgtta 12738644  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 704  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738645 aacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  703 gatgat 708  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 510 - 689
Target Start/End: Original strand, 13392160 - 13392338
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| |||||||    
T  13392160 ttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-cccatta 13392258  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 689  Q
    ||   ||||| | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392259 aatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 523 - 708
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  523 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 622  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  623 tattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||| ||| ||| ||||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 534 - 693
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  534 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 632  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  633 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 693  Q
      ||  |||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 510 - 691
Target Start/End: Original strand, 39111822 - 39112002
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    ||||  | |||    
T  39111822 ttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatcttta 39111920  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 691  Q
    |||||||||| ||||||   ||| ||| |  |||| |||||||||| |||  |  ||| |||||||  ||||||||||||||    
T  39111921 aacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattat 39112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 464  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 618
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  575 aacattaagtataacttaattgtgagaccccattaaacataagg 618  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 616
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  551 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 616  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 464  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||| |||||| | |||||||||||| ||||||||| |||||| ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 17781316 - 17781118
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781316 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 17781217  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781216 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  703 gatgat 708  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  703 gatgat 708  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 504 - 708
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  504 aggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 603  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  604 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 703  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  704 atgat 708  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 10579553 - 10579355
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10579553 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagaccccatta 10579454  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10579453 aacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatgat 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  703 gatgat 708  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 19089943 - 19089745
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19089943 ttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagaccccttta 19089844  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19089843 aacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatgat 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact-------attatgt 693  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  694 aggtagactgatgat 708  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 520 - 708
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  520 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 619  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  620 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  703 gatgat 708  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  703 gatgat 708  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 32057098 - 32056900
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||| |||    
T  32057098 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccgtta 32056999  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32056998 aacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatgat 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 501 - 662
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 1647723 - 1647521
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagacccc 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||    
T  1647723 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagacccc 1647624  T
Q  606 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 705  Q
     |||||||||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | |||||||||    
T  1647623 gttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagactgat 1647524  T
Q  706 gat 708  Q
    |||    
T  1647523 gat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 521 - 689
Target Start/End: Original strand, 16200145 - 16200313
Alignment:
Q  521 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 620  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  16200145 ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagaccccattaaacataaggac 16200244  T
Q  621 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 689  Q
    | |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200245 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 501 - 693
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 693  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 501 - 693
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 693  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 521 - 689
Target Start/End: Original strand, 16200451 - 16200619
Alignment:
Q  521 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 620  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||     
T  16200451 ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagactccaataaacataaggac 16200550  T
Q  621 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 689  Q
    | |||||| ||||||| |||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200551 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 24253587 - 24253388
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccatt 608  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| ||||||     
T  24253587 ttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatccccatc 24253488  T
Q  609 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||||| |||||||| |||||||  || |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||| |||||    
T  24253487 aaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatgat 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 607 - 708
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  607 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 706  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  707 at 708  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 503 - 565
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 565  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 8490395 - 8490452
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8490395 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 18641047 - 18640989
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18641047 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Complemental strand, 10579654 - 10579603
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgt 459  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10579654 ctgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  409 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 16482783 - 16482727
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  16482783 ctgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 548
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtc 548  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 459
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgt 459  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  409 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| |||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||| ||||||| |||||||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  417 taagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||| |||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 14250 - 14193
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  14250 ctgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  703 gatgat 708  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 510 - 708
Target Start/End: Original strand, 6094132 - 6094330
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6094132 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 6094231  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  6094232 aacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatgat 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 503 - 702
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 510 - 708
Target Start/End: Original strand, 24642658 - 24642856
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24642658 ttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 24642757  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  24642758 aacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatgat 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 510 - 634
Target Start/End: Original strand, 24636863 - 24636987
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  24636863 ttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccgtta 24636962  T
Q  610 aacataaggaaactattctcaaagt 634  Q
    ||||||||||||||||||| |||||    
T  24636963 aacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 513 - 705
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 705  Q
     |||  | | |||||| |||||||  |||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 21940572 - 21940629
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21940572 ctgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 6094029 - 6094087
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6094029 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 692
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  531 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 629  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  630 aaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 692  Q
    ||| |||  ||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 461  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 705
Target Start/End: Original strand, 2375027 - 2375208
Alignment:
Q  522 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaa 621  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||||||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  622 ctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 705  Q
     |||| | |||||||  ||||||| | ||||||| | |||| |||| |||||||| |||   ||||||| || |||||| ||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaagtatatgaactattaagtgggtagattgat 2375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  539 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 408 - 446
Target Start/End: Original strand, 24636604 - 24636642
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattg 446  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24636604 ctgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 708
Target Start/End: Complemental strand, 14984030 - 14983920
Alignment:
Q  597 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtagg 696  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtggg 14983932  T
Q  697 tagactgatgat 708  Q
    |||||| |||||    
T  14983931 tagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  703 gatgat 708  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  703 gatgat 708  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  703 gatgat 708  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  703 gatgat 708  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  703 gatgat 708  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  703 gatgat 708  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 540 - 708
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  540 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 639  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  640 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 708
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  524 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 618  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  619 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||| |||||| ||||||||  ||||||| |||||||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 520 - 693
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  520 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 618  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  619 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 693  Q
    |   |||| | |||||||  ||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  411 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 539 - 708
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  539 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 638  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  639 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 11651628 - 11651684
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 463  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11651628 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 539 - 707
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  539 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 636  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  637 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 707  Q
    | |||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 563
Target Start/End: Complemental strand, 31258118 - 31258065
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 563  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258118 ttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 13359553 - 13359512
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  13359553 taatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  417 taagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Complemental strand, 189250 - 189221
Alignment:
Q  436 tatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||||||||||||||||||    
T  189250 tatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 16394525 - 16394484
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  16394525 taatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 582
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  517 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 582  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 520 - 708
Target Start/End: Original strand, 18796525 - 18796713
Alignment:
Q  520 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 619  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  620 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
     | |||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagactgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 510 - 708
Target Start/End: Original strand, 18619814 - 18620011
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||| |||||||    
T  18619814 ttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccatta 18619912  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||| ||||| | |||||| |||||||| || ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  18619913 aacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggccgatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 510 - 646
Target Start/End: Complemental strand, 19692734 - 19692598
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | |||||    
T  19692734 ttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctcatta 19692635  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaa 646  Q
    |||  ||||||| |||||| ||||||||| |||||||    
T  19692634 aactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 566 - 693
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  566 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 665  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||| || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  666 tatcattaaagcatagagactattatgt 693  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 535 - 708
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  535 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 633  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  634 tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
     ||||||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 535 - 708
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  535 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 632  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  633 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
      ||  ||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 692
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  537 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 635  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  636 tccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 692  Q
    |||||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 708
Target Start/End: Complemental strand, 12098705 - 12098618
Alignment:
Q  621 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||| | ||||||| |||||||||| |||| |  ||| | |||||  | |||| |||||||||||||||||| |||||||||||||    
T  12098705 actatttttaaagtattcgtagtcaagttttaatatgaaattggatagtaataaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 708
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  621 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||| |||||||  |||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 693
Target Start/End: Complemental strand, 24471792 - 24471643
Alignment:
Q  543 aaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtag 642  Q
    |||||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  ||||  ||||||| | | ||||||  |||||||| ||     
T  24471792 aaagtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatac 24471694  T
Q  643 tcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 693  Q
     ||| || ||||   |||||||||| || ||||||||| ||||||||||||    
T  24471693 acaaactctattttaaagtgggataacactaaagcataaagactattatgt 24471643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 708
Target Start/End: Complemental strand, 22183552 - 22183483
Alignment:
Q  639 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    |||||||||||||| || |||   ||||| |||||||| ||||||||||||| || |||||| |||||||    
T  22183552 gtagtcaagctttagtgtgaaaatggataacattaaagtatagagactattacgtgggtagattgatgat 22183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 503 - 708
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  703 gatgat 708  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 510 - 708
Target Start/End: Complemental strand, 19707416 - 19707218
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19707416 ttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccgtta 19707317  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19707316 aacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatgat 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 510 - 689
Target Start/End: Complemental strand, 27347675 - 27347497
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||||||    
T  27347675 ttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-cccatta 27347577  T
Q  610 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 689  Q
    |||  ||||| | |||||| |||||||  ||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347576 aacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 513 - 708
Target Start/End: Complemental strand, 22547211 - 22547016
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||     
T  22547211 tttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctcattaaat 22547112  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    ||| ||| | |||| | ||||||| || |||||| |||||||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||||    
T  22547111 atatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatgat 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 501 - 610
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  601 accccattaa 610  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 513 - 686
Target Start/End: Complemental strand, 17285927 - 17285754
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| |||| | |||||    
T  17285927 tttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccctagtaaac 17285828  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 686  Q
      || || | |||||| ||||||| | ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285827 taaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 567 - 708
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  567 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 665  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  666 tatcattaaagcatagagactattatgtaggtagactgatgat 708  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 614 - 706
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  614 taaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 706  Q
    |||||| |||||||| ||| ||||| |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 513 - 686
Target Start/End: Complemental strand, 17299080 - 17298907
Alignment:
Q  513 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 612  Q
    ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| |||| | |||||    
T  17299080 tttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccctagtaaac 17298981  T
Q  613 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 686  Q
      || || | |||||| ||||||| | ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298980 taaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 610
Target Start/End: Original strand, 31886540 - 31886640
Alignment:
Q  510 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 609  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| ||||||    
T  31886540 ttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactccatta 31886639  T
Q  610 a 610  Q
    |    
T  31886640 a 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 19714799 - 19714742
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19714799 ctgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 27347780 - 27347722
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27347780 tctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 617
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  527 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 617  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 18570149 - 18570108
Alignment:
Q  424 taatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  18570149 taatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 464  Q
    ||||||| |||||| ||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 619
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  551 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 619  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 184; Significance: 3e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 501 - 708
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 901 - 957
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 180; Significance: 8e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 501 - 708
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 600  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  601 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  701 ctgatgat 708  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 409 - 464
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 464  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 2e-88; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 503 - 708
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 702  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  703 gatgat 708  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  417 taagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 9e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 503 - 684
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  503 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 602  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  603 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 684  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 230642 - 230584
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  230642 tctgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 565
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  501 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 565  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 8942 - 9000
Alignment:
Q  407 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  8942 tctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  409 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 461  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  411 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 465  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 551
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  520 attttgttttgtttcaaaataataaagtccct 551  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 445
Target Start/End: Complemental strand, 38 - 1
Alignment:
Q  408 ctgttggaataagccataatagccaatctatattgatt 445  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38 ctgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 602
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  530 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 602  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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