View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3063_high_30 (Length: 267)
Name: NF3063_high_30
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3063_high_30 |
 | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 23717240 - 23717495
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717240 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23717339 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717340 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
23717439 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23717440 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
23717495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 32742219 - 32742474
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742219 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
32742318 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742319 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
32742418 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32742419 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
32742474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 35216631 - 35216376
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216631 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
35216532 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216531 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
35216432 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35216431 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
35216376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 38223387 - 38223132
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223387 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38223288 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223287 |
catcatgagggtacaagagtttcgttgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38223188 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38223187 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
38223132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 9313562 - 9313817
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313562 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcagtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
9313661 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313662 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctatgatattcacacgttcttgatgctgtagaaaccactcata |
9313761 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9313762 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
9313817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 42989167 - 42988912
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989167 |
acatcaacagactcactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
42989068 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989067 |
catcatgagggtacagaagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
42988968 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42988967 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
42988912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 3522887 - 3522632
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522887 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3522788 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522787 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3522688 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3522687 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
3522632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 10269208 - 10269463
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269208 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
10269307 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269308 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
10269407 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10269408 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
10269463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 335776 - 335521
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335776 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
335677 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335676 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
335577 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
335576 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
335521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 14219188 - 14218933
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219188 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14219089 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219088 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14218989 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14218988 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
14218933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 30704105 - 30704360
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30704105 |
acatcaacagacccactctcgccaaaacgatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaat |
30704204 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30704205 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
30704304 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
30704305 |
aacaaccttctccatgtcaggatattttgttggtttgtgtcttttgatctccgctc |
30704360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 14677355 - 14677100
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677355 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
14677256 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677255 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
14677156 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14677155 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
14677100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 45107114 - 45106859
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107114 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
45107015 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
45106915 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
45106914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
45106859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 1085593 - 1085848
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085593 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
1085692 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085693 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
1085792 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1085793 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
1085848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 21395911 - 21395667
Alignment:
| Q |
17 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395911 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
21395812 |
T |
|
| Q |
117 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395811 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
21395712 |
T |
|
| Q |
217 |
tcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21395711 |
ccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
21395667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 17195378 - 17195633
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17195378 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtacagaagttaaaatctgaat |
17195477 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17195478 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
17195577 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
17195578 |
aacaaccttctccatatcaggatattttgcttgtttgtgtcttttgatctccgctc |
17195633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 10485669 - 10485414
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10485669 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagtcatcctgtagagaagttaaaatctgaat |
10485570 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10485569 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtaaaaaccactcata |
10485470 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10485469 |
aacaaccttctccacgtcaggatattttgctggtttgtgtcttttgatctccgctc |
10485414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 49550103 - 49550350
Alignment:
| Q |
14 |
agacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
113 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550103 |
agacccactctcgccaaaaggatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
49550202 |
T |
|
| Q |
114 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550203 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
49550302 |
T |
|
| Q |
214 |
tcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
49550303 |
tctccatgtcaggatattttattggtttgtgtcttttgatctccgctc |
49550350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 5926651 - 5926518
Alignment:
| Q |
128 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttcttcatgtcagga |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5926651 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
5926552 |
T |
|
| Q |
228 |
tattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
5926551 |
tattttgctggtttgtgtcttttgatctccgctc |
5926518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 27182471 - 27182604
Alignment:
| Q |
128 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttcttcatgtcagga |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27182471 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
27182570 |
T |
|
| Q |
228 |
tattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
27182571 |
tattttgctggtttgtgtcttttgatctccgctc |
27182604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 44553301 - 44553556
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553301 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
44553400 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553401 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
44553500 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
44553501 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
44553556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 38518163 - 38518418
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518163 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
38518262 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518263 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
38518362 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38518363 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
38518418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 34945789 - 34945534
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34945789 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
34945690 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34945689 |
catcatgagggtgcaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
34945590 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34945589 |
aacaacattctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
34945534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 111 - 261
Target Start/End: Original strand, 27644504 - 27644654
Alignment:
| Q |
111 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaa |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27644504 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtaatattcacacgttcttgatgctgtagaaaccactcataaacaa |
27644603 |
T |
|
| Q |
211 |
ccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27644604 |
ccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
27644654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 20394982 - 20394847
Alignment:
| Q |
126 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttcttcatgtcag |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
20394982 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
20394883 |
T |
|
| Q |
226 |
gatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20394882 |
gatattttgctggtttgtgtcttttgatctccgctc |
20394847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 16641825 - 16642080
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641825 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
16641924 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641925 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
16642024 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16642025 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
16642080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 41774128 - 41773873
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774128 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
41774029 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774028 |
catcatgagggtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
41773929 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41773928 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
41773873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 2026895 - 2026640
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026895 |
acatcaacagacccactctcgacaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2026796 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026795 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2026696 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2026695 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
2026640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 37038760 - 37039015
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038760 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
37038859 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038860 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
37038959 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37038960 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
37039015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 43488288 - 43488033
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488288 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
43488189 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488188 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
43488089 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
43488088 |
aacaactttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
43488033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 23415881 - 23415626
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415881 |
acatcaacagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
23415782 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415781 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgaaattcacacgttcttgatgctgtagaaaccactcata |
23415682 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
23415681 |
aacaaccttctccatgtcaggatattttactggtttgtgtcttttgatctccgctc |
23415626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 3615504 - 3615249
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3615504 |
acatcaacagacccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3615405 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3615404 |
catcatgagggtataagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcata |
3615305 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3615304 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
3615249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 2272800 - 2272545
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272800 |
acatcaacatacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
2272701 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272700 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
2272601 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2272600 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
2272545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 3535114 - 3534859
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535114 |
acatcaacagacccactctcgccaaaacgacgaaataactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
3535015 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535014 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
3534915 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3534914 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
3534859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 6 - 261
Target Start/End: Complemental strand, 12533175 - 12532919
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533175 |
acatcaacagacccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
12533076 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533075 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
12532976 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctgg-tttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
|||||| |||| | ||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
12532975 |
aacaacattctccttgtcaggatattttgctggttttgtgtcttttgatctccgctc |
12532919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 7356517 - 7356769
Alignment:
| Q |
6 |
acatcatcagacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaat |
105 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7356517 |
acatcaacaaacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatt-cccaagccatcctgtagagaagttaaaatctgaat |
7356615 |
T |
|
| Q |
106 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcata |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
7356616 |
catcatgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactc--a |
7356713 |
T |
|
| Q |
206 |
aacaaccttcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7356714 |
aacaaccttctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
7356769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 39078 - 39325
Alignment:
| Q |
14 |
agacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatga |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39078 |
agacccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaatcatcatga |
39177 |
T |
|
| Q |
114 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39178 |
gggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacct |
39277 |
T |
|
| Q |
214 |
tcttcatgtcaggatattttgctggtttgtgtcttttgatctctgctc |
261 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
39278 |
tctccatgtcaggatattttgctggtttgtgtcttttgatctccgctc |
39325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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