View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3063_high_5 (Length: 477)

Name: NF3063_high_5
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3063_high_5
NF3063_high_5
[»] chr7 (52 HSPs)
chr7 (1-228)||(24872053-24872280)
chr7 (323-460)||(24871822-24871959)
chr7 (329-460)||(24874627-24874758)
chr7 (7-247)||(10256167-10256407)
chr7 (1-247)||(46458537-46458785)
chr7 (79-246)||(25154840-25155007)
chr7 (121-246)||(26406170-26406295)
chr7 (8-247)||(131832-132071)
chr7 (9-247)||(33459377-33459615)
chr7 (116-246)||(45719660-45719790)
chr7 (168-244)||(24873590-24873666)
chr7 (104-241)||(27899143-27899280)
chr7 (169-246)||(46457115-46457192)
chr7 (90-247)||(14108986-14109141)
chr7 (90-247)||(14418943-14419098)
chr7 (77-247)||(41516246-41516416)
chr7 (146-247)||(4857245-4857346)
chr7 (146-247)||(38406062-38406163)
chr7 (121-241)||(35484256-35484376)
chr7 (172-247)||(19279609-19279684)
chr7 (172-247)||(22060507-22060582)
chr7 (172-247)||(22746317-22746392)
chr7 (184-247)||(25153702-25153765)
chr7 (172-247)||(43006429-43006504)
chr7 (188-247)||(43935229-43935288)
chr7 (168-247)||(43936133-43936212)
chr7 (81-246)||(4167496-4167661)
chr7 (184-236)||(19278408-19278460)
chr7 (204-247)||(17288249-17288292)
chr7 (165-247)||(34557441-34557523)
chr7 (174-247)||(22744790-22744863)
chr7 (174-235)||(36702949-36703010)
chr7 (174-247)||(40926518-40926591)
chr7 (168-232)||(13446651-13446715)
chr7 (324-360)||(24858039-24858075)
chr7 (174-246)||(46674933-46675005)
chr7 (168-243)||(14206721-14206796)
chr7 (168-243)||(14215411-14215486)
chr7 (172-247)||(22061792-22061867)
chr7 (148-247)||(40930462-40930561)
chr7 (188-247)||(43007662-43007721)
chr7 (148-247)||(43930363-43930462)
chr7 (168-247)||(47163197-47163276)
chr7 (177-235)||(36702833-36702891)
chr7 (205-247)||(46673534-46673576)
chr7 (153-246)||(13286972-13287065)
chr7 (210-247)||(18801259-18801296)
chr7 (153-226)||(35315200-35315273)
chr7 (202-247)||(41126283-41126328)
chr7 (202-246)||(4858371-4858415)
chr7 (168-236)||(28326383-28326451)
chr7 (182-242)||(35127859-35127919)
[»] chr5 (48 HSPs)
chr5 (1-246)||(12933796-12934041)
chr5 (1-246)||(12947957-12948202)
chr5 (47-247)||(19525160-19525360)
chr5 (7-232)||(32734190-32734415)
chr5 (1-246)||(40058063-40058309)
chr5 (1-233)||(2167340-2167572)
chr5 (1-236)||(5382997-5383231)
chr5 (77-247)||(223270-223440)
chr5 (168-241)||(42980702-42980775)
chr5 (168-247)||(12936095-12936174)
chr5 (148-247)||(42510158-42510257)
chr5 (116-233)||(15856592-15856708)
chr5 (8-235)||(38471345-38471573)
chr5 (168-247)||(12950253-12950332)
chr5 (67-150)||(24761620-24761703)
chr5 (116-246)||(12830879-12831009)
chr5 (116-246)||(12862859-12862989)
chr5 (81-233)||(7426699-7426851)
chr5 (168-246)||(5384339-5384417)
chr5 (121-247)||(21387681-21387807)
chr5 (125-222)||(22819467-22819564)
chr5 (168-236)||(19827133-19827201)
chr5 (204-247)||(224619-224662)
chr5 (165-247)||(4567964-4568046)
chr5 (168-247)||(15857611-15857690)
chr5 (168-247)||(19524027-19524105)
chr5 (168-235)||(38473548-38473615)
chr5 (168-242)||(15613554-15613628)
chr5 (184-246)||(18678021-18678083)
chr5 (168-246)||(18695640-18695718)
chr5 (204-247)||(5975800-5975843)
chr5 (172-235)||(10085842-10085905)
chr5 (184-246)||(22819558-22819620)
chr5 (168-241)||(1273139-1273212)
chr5 (174-247)||(15509239-15509312)
chr5 (170-247)||(15614955-15615032)
chr5 (175-247)||(42979492-42979564)
chr5 (174-241)||(1663237-1663304)
chr5 (174-233)||(24761720-24761779)
chr5 (148-247)||(5977046-5977147)
chr5 (79-177)||(14210257-14210354)
chr5 (200-246)||(15510288-15510334)
chr5 (185-247)||(27894033-27894095)
chr5 (146-247)||(18693742-18693843)
chr5 (170-247)||(20988734-20988811)
chr5 (184-241)||(26404219-26404276)
chr5 (202-246)||(4566996-4567040)
chr5 (168-232)||(21389136-21389200)
[»] chr2 (40 HSPs)
chr2 (8-247)||(7037010-7037249)
chr2 (14-192)||(11575326-11575503)
chr2 (4-247)||(12959533-12959777)
chr2 (1-241)||(10367289-10367530)
chr2 (1-247)||(14509253-14509499)
chr2 (8-247)||(37868872-37869112)
chr2 (8-247)||(35799556-35799795)
chr2 (74-247)||(25570769-25570942)
chr2 (163-245)||(23177720-23177802)
chr2 (163-245)||(23588977-23589059)
chr2 (103-247)||(4829509-4829652)
chr2 (93-247)||(12852930-12853084)
chr2 (68-236)||(7490090-7490256)
chr2 (122-241)||(28109816-28109935)
chr2 (168-246)||(12958461-12958539)
chr2 (121-233)||(3532252-3532364)
chr2 (121-241)||(15850605-15850725)
chr2 (12-236)||(42249621-42249843)
chr2 (168-247)||(6706970-6707049)
chr2 (172-247)||(15650485-15650560)
chr2 (168-242)||(1624969-1625043)
chr2 (168-246)||(10368378-10368456)
chr2 (168-246)||(35801038-35801116)
chr2 (172-246)||(2581848-2581922)
chr2 (205-247)||(2583576-2583618)
chr2 (168-246)||(21012073-21012151)
chr2 (108-233)||(7983628-7983753)
chr2 (90-247)||(29424527-29424684)
chr2 (170-246)||(2305585-2305661)
chr2 (12-192)||(8537111-8537289)
chr2 (168-232)||(40174757-40174821)
chr2 (172-247)||(3533623-3533698)
chr2 (196-247)||(12854125-12854176)
chr2 (74-129)||(23233593-23233648)
chr2 (205-247)||(4630114-4630156)
chr2 (121-191)||(14714592-14714662)
chr2 (168-246)||(37867801-37867879)
chr2 (172-242)||(42028955-42029025)
chr2 (168-246)||(42246636-42246714)
chr2 (182-247)||(14510516-14510581)
[»] chr4 (59 HSPs)
chr4 (8-228)||(6140193-6140413)
chr4 (8-236)||(31712339-31712567)
chr4 (1-243)||(52660040-52660282)
chr4 (7-233)||(50530561-50530787)
chr4 (3-213)||(28102154-28102356)
chr4 (116-244)||(29663689-29663817)
chr4 (167-247)||(11113786-11113866)
chr4 (79-247)||(11114884-11115052)
chr4 (8-241)||(17319092-17319327)
chr4 (121-242)||(38370331-38370453)
chr4 (116-241)||(26393068-26393193)
chr4 (124-246)||(56000332-56000454)
chr4 (90-247)||(35787840-35787997)
chr4 (77-247)||(38555178-38555348)
chr4 (175-247)||(21104310-21104382)
chr4 (121-233)||(38418963-38419075)
chr4 (116-243)||(3533549-3533676)
chr4 (168-247)||(28103479-28103558)
chr4 (110-247)||(34438450-34438587)
chr4 (12-236)||(48207556-48207778)
chr4 (172-247)||(33377361-33377436)
chr4 (121-247)||(43419321-43419447)
chr4 (168-241)||(31711142-31711215)
chr4 (74-247)||(39592188-39592361)
chr4 (124-244)||(86850-86970)
chr4 (79-246)||(15786997-15787164)
chr4 (168-247)||(46796019-46796098)
chr4 (169-247)||(34439654-34439732)
chr4 (174-247)||(5687219-5687292)
chr4 (131-247)||(30682983-30683099)
chr4 (121-233)||(44159143-44159255)
chr4 (172-247)||(1273430-1273505)
chr4 (172-247)||(5688634-5688709)
chr4 (184-247)||(15787511-15787574)
chr4 (183-242)||(27408812-27408871)
chr4 (159-242)||(44302769-44302852)
chr4 (116-235)||(56296249-56296368)
chr4 (168-242)||(307798-307872)
chr4 (168-241)||(40146616-40146689)
chr4 (184-244)||(27410692-27410751)
chr4 (168-247)||(44304972-44305051)
chr4 (168-247)||(52658955-52659034)
chr4 (153-243)||(11094574-11094664)
chr4 (93-191)||(29687896-29687994)
chr4 (204-242)||(38553978-38554016)
chr4 (168-242)||(47667227-47667301)
chr4 (110-247)||(17494171-17494308)
chr4 (168-236)||(15446663-15446731)
chr4 (168-236)||(33376273-33376341)
chr4 (172-247)||(37559042-37559117)
chr4 (204-247)||(40143698-40143741)
chr4 (172-247)||(44128331-44128406)
chr4 (168-247)||(53400229-53400308)
chr4 (184-247)||(55952869-55952932)
chr4 (205-247)||(37560329-37560371)
chr4 (153-247)||(47668575-47668669)
chr4 (172-246)||(50531753-50531827)
chr4 (137-233)||(41349487-41349583)
chr4 (168-236)||(48206215-48206283)
[»] chr3 (47 HSPs)
chr3 (1-244)||(51400262-51400506)
chr3 (8-247)||(12062216-12062456)
chr3 (7-247)||(35174215-35174454)
chr3 (1-233)||(23559877-23560111)
chr3 (121-247)||(11219474-11219600)
chr3 (6-236)||(49333038-49333266)
chr3 (93-243)||(53808366-53808516)
chr3 (116-233)||(21127983-21128100)
chr3 (7-247)||(26798737-26798978)
chr3 (93-246)||(43346365-43346518)
chr3 (175-241)||(49122002-49122068)
chr3 (116-236)||(48254830-48254949)
chr3 (168-247)||(32980445-32980524)
chr3 (153-247)||(8371264-8371358)
chr3 (8-247)||(48867267-48867502)
chr3 (158-247)||(19622049-19622138)
chr3 (121-246)||(17350048-17350173)
chr3 (153-247)||(25583158-25583252)
chr3 (168-247)||(48252977-48253056)
chr3 (172-247)||(51825618-51825693)
chr3 (121-247)||(39133061-39133187)
chr3 (173-247)||(54653964-54654038)
chr3 (168-229)||(25585826-25585887)
chr3 (168-241)||(47855331-47855404)
chr3 (159-247)||(32979132-32979220)
chr3 (195-247)||(51401371-51401423)
chr3 (184-247)||(11220667-11220730)
chr3 (174-241)||(47808105-47808172)
chr3 (172-235)||(51824182-51824245)
chr3 (168-242)||(29536763-29536837)
chr3 (165-247)||(32974213-32974295)
chr3 (172-246)||(43103293-43103367)
chr3 (172-244)||(2124076-2124148)
chr3 (175-247)||(19253002-19253074)
chr3 (204-244)||(47766980-47767020)
chr3 (168-247)||(8372609-8372688)
chr3 (200-247)||(32973183-32973230)
chr3 (172-247)||(42632750-42632825)
chr3 (168-247)||(43345363-43345442)
chr3 (80-191)||(47765538-47765649)
chr3 (146-191)||(7483496-7483541)
chr3 (210-247)||(10987688-10987725)
chr3 (174-247)||(41386174-41386247)
chr3 (175-236)||(43101949-43102010)
chr3 (202-247)||(53047941-53047986)
chr3 (202-247)||(53049064-53049109)
chr3 (168-224)||(29537135-29537191)
[»] chr8 (51 HSPs)
chr8 (1-247)||(13366877-13367122)
chr8 (1-247)||(37324515-37324760)
chr8 (1-247)||(19913536-19913781)
chr8 (1-247)||(44606183-44606429)
chr8 (1-247)||(8095390-8095638)
chr8 (8-230)||(35943969-35944191)
chr8 (1-233)||(2421118-2421351)
chr8 (1-247)||(36070222-36070472)
chr8 (67-233)||(20308663-20308829)
chr8 (67-233)||(21095296-21095462)
chr8 (116-246)||(24069387-24069517)
chr8 (116-246)||(39515244-39515374)
chr8 (72-247)||(37472447-37472621)
chr8 (93-247)||(36756108-36756262)
chr8 (116-242)||(7816030-7816155)
chr8 (116-236)||(7796749-7796868)
chr8 (93-247)||(10052148-10052302)
chr8 (160-241)||(29738341-29738422)
chr8 (7-222)||(8395064-8395279)
chr8 (116-242)||(7770839-7770964)
chr8 (168-246)||(29739636-29739714)
chr8 (168-246)||(36940026-36940104)
chr8 (158-244)||(39546660-39546746)
chr8 (168-247)||(24068374-24068453)
chr8 (168-247)||(37274931-37275010)
chr8 (166-247)||(38029-38110)
chr8 (81-246)||(7486122-7486287)
chr8 (116-247)||(117092-117223)
chr8 (172-247)||(3237461-3237536)
chr8 (184-247)||(38591016-38591079)
chr8 (78-192)||(40250144-40250257)
chr8 (170-247)||(19914901-19914978)
chr8 (174-247)||(31625383-31625456)
chr8 (93-246)||(37276161-37276314)
chr8 (121-246)||(44103242-44103367)
chr8 (93-233)||(34617113-34617253)
chr8 (67-224)||(31871462-31871612)
chr8 (176-247)||(43277922-43277993)
chr8 (168-241)||(34616179-34616257)
chr8 (172-241)||(1570203-1570272)
chr8 (153-222)||(36938750-36938819)
chr8 (146-233)||(39220737-39220824)
chr8 (158-233)||(41522671-41522746)
chr8 (172-246)||(41866939-41867013)
chr8 (1-38)||(29738524-29738561)
chr8 (210-247)||(41867951-41867988)
chr8 (216-244)||(6844614-6844642)
chr8 (74-134)||(32553804-32553864)
chr8 (74-134)||(35799610-35799670)
chr8 (184-244)||(43275797-43275857)
chr8 (203-247)||(43386730-43386774)
[»] chr6 (21 HSPs)
chr6 (1-247)||(31738407-31738654)
chr6 (8-236)||(293474-293701)
chr6 (105-246)||(14328704-14328845)
chr6 (105-246)||(14421714-14421855)
chr6 (79-235)||(27440079-27440235)
chr6 (168-247)||(22299896-22299975)
chr6 (131-247)||(9927650-9927765)
chr6 (90-242)||(18139402-18139554)
chr6 (172-247)||(8412313-8412388)
chr6 (168-247)||(31740265-31740344)
chr6 (109-235)||(22298660-22298786)
chr6 (174-247)||(8411130-8411203)
chr6 (153-247)||(33801995-33802089)
chr6 (8-177)||(16268655-16268824)
chr6 (189-236)||(34084148-34084195)
chr6 (168-241)||(27438840-27438913)
chr6 (184-247)||(5311323-5311386)
chr6 (168-247)||(33807733-33807812)
chr6 (103-197)||(2130877-2130970)
chr6 (214-247)||(13173081-13173114)
chr6 (202-247)||(19368545-19368590)
[»] chr1 (51 HSPs)
chr1 (6-247)||(13930506-13930747)
chr1 (6-247)||(14071035-14071275)
chr1 (8-241)||(51726676-51726910)
chr1 (97-243)||(21277042-21277188)
chr1 (1-233)||(22167837-22168064)
chr1 (104-241)||(14169669-14169806)
chr1 (108-247)||(8092642-8092781)
chr1 (168-247)||(13641301-13641380)
chr1 (172-247)||(25787161-25787236)
chr1 (90-246)||(49141411-49141567)
chr1 (1-140)||(40811403-40811541)
chr1 (169-247)||(36511325-36511403)
chr1 (172-246)||(47411029-47411103)
chr1 (110-247)||(36509855-36509992)
chr1 (163-247)||(26056135-26056219)
chr1 (108-247)||(9633819-9633958)
chr1 (110-241)||(19466140-19466271)
chr1 (1-84)||(21277255-21277338)
chr1 (172-247)||(47136684-47136759)
chr1 (168-247)||(49139845-49139924)
chr1 (173-247)||(3979311-3979385)
chr1 (109-235)||(13642491-13642617)
chr1 (121-233)||(14764287-14764399)
chr1 (168-247)||(40812604-40812683)
chr1 (108-247)||(44977265-44977404)
chr1 (172-242)||(16217489-16217559)
chr1 (81-247)||(52742882-52743048)
chr1 (170-247)||(48935105-48935182)
chr1 (109-236)||(2972942-2973069)
chr1 (168-247)||(9592282-9592361)
chr1 (168-247)||(50679814-50679893)
chr1 (172-246)||(16218475-16218549)
chr1 (170-247)||(14390302-14390379)
chr1 (165-230)||(40811256-40811321)
chr1 (187-244)||(47411460-47411517)
chr1 (174-247)||(52181304-52181377)
chr1 (8-100)||(38281023-38281115)
chr1 (174-241)||(3978094-3978161)
chr1 (184-247)||(25786012-25786075)
chr1 (168-247)||(26054941-26055020)
chr1 (200-247)||(35683099-35683146)
chr1 (170-236)||(19464655-19464721)
chr1 (174-232)||(21278217-21278275)
chr1 (202-247)||(2236857-2236902)
chr1 (168-241)||(20953338-20953411)
chr1 (74-191)||(23082025-23082142)
chr1 (175-247)||(13929339-13929411)
chr1 (168-236)||(14171261-14171329)
chr1 (79-191)||(22766724-22766836)
chr1 (137-233)||(40109419-40109515)
chr1 (134-230)||(45570379-45570475)
[»] scaffold0003 (2 HSPs)
scaffold0003 (79-235)||(47126-47282)
scaffold0003 (168-241)||(48449-48522)
[»] scaffold0122 (1 HSPs)
scaffold0122 (8-203)||(16033-16228)
[»] scaffold1974 (1 HSPs)
scaffold1974 (146-247)||(599-700)
[»] scaffold1878 (1 HSPs)
scaffold1878 (146-247)||(574-675)
[»] scaffold0290 (2 HSPs)
scaffold0290 (146-247)||(9449-9550)
scaffold0290 (168-246)||(8424-8502)
[»] scaffold0178 (2 HSPs)
scaffold0178 (12-247)||(1255-1488)
scaffold0178 (168-247)||(2258-2337)
[»] scaffold0166 (2 HSPs)
scaffold0166 (67-150)||(4117-4200)
scaffold0166 (174-233)||(4217-4276)
[»] scaffold2127 (1 HSPs)
scaffold2127 (172-247)||(512-587)
[»] scaffold0013 (1 HSPs)
scaffold0013 (176-247)||(96204-96275)
[»] scaffold0051 (1 HSPs)
scaffold0051 (168-242)||(22176-22250)
[»] scaffold0098 (1 HSPs)
scaffold0098 (121-222)||(40977-41078)
[»] scaffold0007 (1 HSPs)
scaffold0007 (174-246)||(145868-145940)
[»] scaffold0025 (2 HSPs)
scaffold0025 (80-247)||(56605-56772)
scaffold0025 (168-236)||(54646-54714)
[»] scaffold0024 (1 HSPs)
scaffold0024 (168-247)||(72979-73058)
[»] scaffold0084 (2 HSPs)
scaffold0084 (121-247)||(13150-13276)
scaffold0084 (168-247)||(11750-11829)
[»] scaffold0155 (1 HSPs)
scaffold0155 (215-247)||(5213-5245)
[»] scaffold0046 (1 HSPs)
scaffold0046 (203-247)||(23450-23494)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24872280 - 24872053
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  24872280 atggaggaaaaatttaggtgtttgtggtttattataagttatgatagatccctccatgattcaacggtctccatttataaaaaagatcaaaaggttaaaa 24872181  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||| || |||||||||||| |    
T  24872180 atgaaagacttaatgaggtttatggtggatcatctataaagttgattcaccatagacatttaaggttaaaaacaaacggaaaggatcaaaatggtaaacg 24872081  T
Q  201 gcagaagacttatgagaccaaattgaga 228  Q
    | | ||||||||||||||||||| ||||    
T  24872080 gaaaaagacttatgagaccaaatagaga 24872053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 24871959 - 24871822
Alignment:
Q  323 ctgacttagtttgtagtctcgatgatattgtaattaaagaaactgccataagaaaacaagattagattgtaattaaagaaactgccactagaaaacaaga 422  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24871959 ctgacttagtttgtagtctcgattatattgtaattaaagaaactgccataagaaaacaagattagattgtaattaaagaaacagccactagaaaacaaga 24871860  T
Q  423 ttaaaacgaaacatcatgtgcatatgattaaactattt 460  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24871859 ttaaaacgaaacatcatgtgcatatgattaaactattt 24871822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 329 - 460
Target Start/End: Original strand, 24874627 - 24874758
Alignment:
Q  329 tagtttgtagtctcgatgatattgtaattaaagaaactgccataagaaaacaagattagattgtaattaaagaaactgccactagaaaacaagattaaaa 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  24874627 tagtttgtagtctcgatgatattgtaattaaagaaactgccataagaaaacaagattagattctaattaaagaaactgccactagaaaacaagattaaag 24874726  T
Q  429 cgaaacatcatgtgcatatgattaaactattt 460  Q
    ||||||||||||||||||||||||||||||||    
T  24874727 cgaaacatcatgtgcatatgattaaactattt 24874758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 10256407 - 10256167
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||||||||  || |||||||||||| || ||||||||||  ||||||||| |||    
T  10256407 gaaaaaattaggtgtttgtggtttattataaactataatagatccctccatgatccaacagtctccatttaaaataaagatcgaaccgttaaaaataaaa 10256308  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
    |||||||| |||| |||||||||  ||||||||||||| |||||| ||||  ||||| |||||||| ||   ||||||||||||||  |||| |  ||||    
T  10256307 gatttaataaggtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattactagaaatgaccaaaatactaaacgatagaa 10256208  T
Q  207 gacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || |||||||||||  ||||||||||| || |||| |||||    
T  10256207 gagttatgagaccattttgagacacttaatagttaagggac 10256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 46458537 - 46458785
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttat--aaaaaagatcgaaaggttaa 98  Q
    ||||||||||||||||||||||||||||| |||||||| ||  ||||||| || ||||||  ||   ||  ||||||   |||||||||| || ||||||    
T  46458537 atggaggaaaaaattaggtgtttgtggttcattataaggtacaatagatctcttcatgatccaacgatccacatttaacaaaaaaagatcaaacggttaa 46458636  T
Q  99 aaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaa 198  Q
    || |    |||||||| |||| |||||||||  ||||||||||||| |||||| |||| |||||| ||||||||| |||||| | |||||||||||||||    
T  46458637 aactatgtgatttaataaggtctatggtggactacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagaggaccaaaatggtaaa 46458736  T
Q  199 tggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     || |||||| ||||| ||||||||||||||||||||| |||| |||||    
T  46458737 cggaagaagatttatgggaccaaattgagacactttatagttaagggac 46458785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 25154840 - 25155007
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacg 178  Q
    ||||| |||| || |||||||||| ||||||||||| || ||||||||||| ||| |||||||||| |||||| |||| |||||| ||||||||| ||||    
T  25154840 aaaaacgatcaaacggttaaaaataaaagatttaataagttttatggtggaccacttataaagttggttcaccttagacatttaaggttaaaaacaaacg 25154939  T
Q  179 gaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    || |||||||||||| ||||  | |||||| ||||||||  ||||||||||||||||| |||| ||||    
T  25154940 gagatgaccaaaatgataaacagaagaagatttatgagattaaattgagacactttatagttaaggga 25155007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 26406295 - 26406170
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| |||||| ||||||| |||||| |||| |||||| |||||||| ||||||| |||||||||||| |||| ||||||||| |||||||| ||    
T  26406295 tatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagatgaccaaaatgttaaacggcagaagagttatgagatca 26406196  T
Q  221 aattgagacactttattgttagggga 246  Q
    |||||||||||||||| |||| ||||    
T  26406195 aattgagacactttatcgttatggga 26406170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 131832 - 132071
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    ||||||||||||| |||||||| |||||||| ||  ||||||| |||||||||  || | ||| |||||| | |||||||| || |||||||| | |||     
T  131832 aaaaaattaggtggttgtggttcattataagctacaatagatctctccatgatccaacaatcttcatttaaagaaaagatcaaacggttaaaattaaaaa 131931  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| | ||||||||| |  ||| || ||||||| |||||| |||| |||||| |||||||||||||||| |||| || | | ||||| ||  ||||    
T  131932 atttaataaagtttatggtagtccacttacaaagttggttcaccttagacatttaaggttaaaaactaacggagatgatcacattagtaaacggaggaag 132031  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| |||||||| || |||||| || |||| |||||    
T  132032 acttatgggaccaaatcgacacacttaatagttaagggac 132071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 33459377 - 33459615
Alignment:
Q  9 aaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaaga 108  Q
    |||||||||||| ||||||||||||||||||||  ||||||| ||| |||||  || | |||  ||||| |||||| ||| || |||||||| |  ||      
T  33459377 aaaaattaggtggttgtggtttattataagttaaaatagatctctctatgatccaacaatcttaatttaaaaaaaatatcaaacggttaaaattacaaat 33459476  T
Q  109 tttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaaga 208  Q
    |||||| | ||  ||||| || |||||| ||||||| |||||| |||| | |||| ||||||||||||| |||| ||||| | | ||||| ||  |||||    
T  33459477 tttaataaagtccatggtagaccacctacaaagttggttcaccttagacagttaaggttaaaaactaacagaaaagaccacattagtaaacggaggaaga 33459576  T
Q  209 cttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||||||||||||||||||| ||||| ||||    
T  33459577 cttatgggaccaaattgagacactttatagttagaggac 33459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 45719790 - 45719660
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||||||||||||| ||||||||| |||| | |||| |||| ||||| ||||||||||| ||| |||  ||||||||||||||   ||||||| ||||||    
T  45719790 aggtttatggtggagcacctataatgttggtccaccttagacatttagtgttaaaaactgacgaaaaaaaccaaaatggtaaacaacagaagagttatga 45719691  T
Q  216 gaccaaattgagacactttattgttagggga 246  Q
    ||||||||| ||||||||||| |||||||||    
T  45719690 gaccaaatttagacactttatagttagggga 45719660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 24873590 - 24873666
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  24873590 aaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgagacactttatagttaggg 24873666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 27899143 - 27899280
Alignment:
Q  104 aaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggca 203  Q
    ||||||| ||| || | |||||||| ||  ||||||||||| |||||| |||| |||||| |||||||||||||||| | ||||||||| ||||| | ||    
T  27899143 aaagattcaataagatctatggtgggtcgtctataaagttggttcaccttagatatttaaggttaaaaactaacggataagaccaaaatagtaaacgaca 27899242  T
Q  204 gaagacttatgagaccaaattgagacactttattgtta 241  Q
     |||| ||||| || |||||||||| | ||||| ||||    
T  27899243 aaagatttatgggatcaaattgagatattttatagtta 27899280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 46457192 - 46457115
Alignment:
Q  169 aaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||| ||| || |||||||||||||||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||    
T  46457192 aaaacaaacagacatgaccaaaatggtaaatggaagaagatttatgggaccaaattgagacactttatagttaaggga 46457115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 14108986 - 14109141
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | |||  |||||| |||| ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||| ||    
T  14108986 aaaggttaaaatttaaaattttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggactaa 14109085  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || |||||| |||| |||||  ||| |||||  |||||||| ||||| |||| |||||    
T  14109086 aacggtaaacggcaaaagac--atgggaccagtttgagacattttatagttaagggac 14109141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 14418943 - 14419098
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | |||  |||||| |||| ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||| ||    
T  14418943 aaaggttaaaatttaaaattttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggactaa 14419042  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || |||||| |||| |||||  ||| |||||  |||||||| ||||| |||| |||||    
T  14419043 aacggtaaacggcaaaagac--atgggaccagtttgagacattttatagttaagggac 14419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 247
Target Start/End: Original strand, 41516246 - 41516416
Alignment:
Q  77 ataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaa 176  Q
    |||||||||||| || | || ||| | ||| ||||||| | || ||||||  | |||||| ||||||  | |||| |||| ||||||  |||||||||||    
T  41516246 ataaaaaagatcaaacgatttaaatttaaaaatttaataaagtctatggtataacacctacaaagttagtccaccttagacatttaagattaaaaactaa 41516345  T
Q  177 cggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    | |||||||||| | |  |||| || |||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  41516346 cagaaatgaccacattactaaacggaagaatacttatgggaccaaattaagacactttatagttaggggac 41516416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 4857346 - 4857245
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| |||| |||| |||||||||||||||||| | ||| ||||  ||||| ||||||||| || || |||||||| |||||| ||||| ||||||||    
T  4857346 ttcaccttagacatttgatgttaaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagttagggg 4857247  T
Q  246 ac 247  Q
    ||    
T  4857246 ac 4857245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 38406163 - 38406062
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| |||| |||| |||||||||| ||||||||| ||||||||  ||||| | ||||||| |||||  ||||  |||||||||||||| ||||||||    
T  38406163 ttcaccttagacatttgatgttaaaaattaacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacactttatagttagggg 38406064  T
Q  246 ac 247  Q
    ||    
T  38406063 ac 38406062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 35484256 - 35484376
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||||||| |||| |||||| |||| |||||  |||||||||||||| |   ||||||||| |  |||||||||||| ||||| ||| |    
T  35484256 tatggtggaccacctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaataggtaatggcagaagagttatgggacta 35484355  T
Q  221 aattgagacactttattgtta 241  Q
    |||||| | ||||||| ||||    
T  35484356 aattgaaatactttatagtta 35484376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 19279609 - 19279684
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| ||||||||| ||||| | || || | ||||| ||||||||||||||||||||| ||||||||||    
T  19279609 actaacggaaaggaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggac 19279684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 22060582 - 22060507
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| ||||| |||| ||||||| ||  |||||||||||||||||||| ||||| ||||    
T  22060582 actaacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagttagaggac 22060507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 22746317 - 22746392
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | || |||||| ||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||||    
T  22746317 actaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggac 22746392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 25153765 - 25153702
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| |||||| || |||||| ||||| ||||||||||||||||||||| ||||||||||    
T  25153765 gaccaaaacggtaaacggaagaagatttatgggaccaaattgagacactttatagttaggggac 25153702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 43006504 - 43006429
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| | ||| |||| |||||||| | |||||||||||||||||| || ||||||||||    
T  43006504 actaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagttaggggac 43006429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 43935288 - 43935229
Alignment:
Q  188 aaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  43935288 aaaatagtaaacggcagaagatttatgagaccaaattgagacactttatagttagaggac 43935229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 43936133 - 43936212
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||||| ||||| | ||||||| ||||||||||||||| ||| ||||||| ||||| ||||    
T  43936133 aaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgagaccaaattaagaaactttatagttagaggac 43936212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 4167661 - 4167496
Alignment:
Q  81 aaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgga 180  Q
    |||| ||| ||||||| ||| | ||| ||||||| || | ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||| | || ||    
T  4167661 aaaaaatcaaaaggttgaaatttaaaaatttaataagatctatggtggaccacctttaaacatggttcaccttagaaatttgatgttaaaaattgacaga 4167562  T
Q  181 aatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| ||||  ||||| | ||||||||||||  || |||||||| |||||| || |||| ||||    
T  4167561 aatgactaaaacagtaaacgacagaagacttataggatcaaattgacacacttaatagttaaggga 4167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19278460 - 19278408
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||    
T  19278460 gaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttat 19278408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 17288249 - 17288292
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  17288249 gaagacttatgggaccaaattgagacactttatagttaggggac 17288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 34557523 - 34557441
Alignment:
Q  165 gttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||  ||||||| ||||||||||   |||| |||| ||||| || | ||||||||||||||||||||| ||||||||||    
T  34557523 gttaaaatgtaacggatatgaccaaaagaataaacggcaaaagacataagggaccaaattgagacactttatagttaggggac 34557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 22744863 - 22744790
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | ||||||||| ||||| |||| |||| ||||  ||||||||||| ||||||||| ||||||||||    
T  22744863 taacggagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacactttatagttaggggac 22744790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 36702949 - 36703010
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    ||||||||| ||||||||| ||||| ||||||| | ||||| ||||||||||||||| ||||    
T  36702949 taacggaaaggaccaaaatagtaaacggcagaatatttatgggaccaaattgagacagttta 36703010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 40926518 - 40926591
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | |||||||| |||||| || |||| | ||||  ||||||||||||||||||||| ||||||||||    
T  40926518 taacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacactttatagttaggggac 40926591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 13446651 - 13446715
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacact 232  Q
    ||||||||||||| | |||||| ||  |||| ||||||||| ||||| |||||||||||||||||    
T  13446651 aaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaattgagacact 13446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 24858039 - 24858075
Alignment:
Q  324 tgacttagtttgtagtctcgatgatattgtaattaaa 360  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24858039 tgacttagtttggagtctcgatgatattgtaattaaa 24858075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 46674933 - 46675005
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||| | ||||||||| ||||| |||| |||| ||||| |||||||| |||||||||||| |||| ||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagttaaggga 46675005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 14206796 - 14206721
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
    ||||||||||||| |||| |||||| ||||| | ||||||| ||||  ||||||||||| ||| ||||| ||||||    
T  14206796 aaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttagg 14206721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 14215486 - 14215411
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
    ||||||||||||| |||| |||||| ||||| | ||||||| ||||  ||||||||||| ||| ||||| ||||||    
T  14215486 aaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttagg 14215411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 22061792 - 22061867
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||| ||||| ||||| |||| |||| ||||| ||||||||||||||  ||||| ||||||||||    
T  22061792 actaacggagaagactaaaatagtaaacggcataagatttatgggaccaaattgagacgttttatagttaggggac 22061867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 40930561 - 40930462
Alignment:
Q  148 caccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||| |||| ||||||||||||||  || | ||| |||| ||||||   || |||| ||||| ||||||||||| ||||||||| ||||||||||    
T  40930561 caccttagatatttgatgttaaaaactaatagagaggactaaaacggtaaacatcaaaagatttatgggaccaaattgaaacactttatagttaggggac 40930462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 43007662 - 43007721
Alignment:
Q  188 aaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||| | || |||||||||| ||||||||||||||||||||| ||||| ||||    
T  43007662 aaaatagtaaacgacataagacttatgggaccaaattgagacactttatagttagaggac 43007721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 43930462 - 43930363
Alignment:
Q  148 caccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||| |||||| |||||||| |||| || | ||||||||| ||||| | ||||||| ||||  ||||||||||||||  || || ||||||||||    
T  43930462 caccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggac 43930363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 47163276 - 47163197
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||||| ||||| || | |||| ||||| ||||||||| || |||||||| ||||| ||||    
T  47163276 aaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaattaaggcactttatagttagaggac 47163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 36702891 - 36702833
Alignment:
Q  177 cggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    ||||||||| |||||| ||||| ||||||| | ||||| ||||||||||||||| ||||    
T  36702891 cggaaatgatcaaaatagtaaacggcagaatatttatgggaccaaattgagacagttta 36702833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 46673576 - 46673534
Alignment:
Q  205 aagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  46673576 aagatttatgggaccaaattgaaacactttattgttaggggac 46673534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 13286972 - 13287065
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||| |||||| |||||||||||||| | | ||||||||| |||||  ||| ||||| || | ||||||||||| |||||| || |||| ||||    
T  13286972 tagacatttaaggttaaaaactaacgaagaggaccaaaatagtaaacagcataagacataagggaccaaattgaaacacttaatagttaaggga 13287065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 18801296 - 18801259
Alignment:
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  18801296 ttatgggaccaaattgagacactttatagttaggggac 18801259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 35315200 - 35315273
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattga 226  Q
    |||| |||| ||||||||||||||| || | ||| ||||  ||||| | ||||||||||||| |||||||||||    
T  35315200 tagacatttgatgttaaaaactaacagagaggactaaaacagtaaacgacagaagacttatgggaccaaattga 35315273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 41126328 - 41126283
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||    
T  41126328 cagaagacataagggaccaaattgagacactttatagttaggggac 41126283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 4858371 - 4858415
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  4858371 cagaagatttatgggaccaaattgagacattttatagttagggga 4858415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 28326383 - 28326451
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||||||| | ||||| ||| ||||| ||  ||||||||||   ||||||||||||||||||||    
T  28326383 aaaaactaacggagaggaccacaatagtaaacggaggaagacttatagaaccaaattgagacactttat 28326451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 35127919 - 35127859
Alignment:
Q  182 atgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||||||||| ||||| |||| |||| ||||| ||| ||||||||||| ||||| |||||    
T  35127919 atgaccaaaatagtaaacggcataagatttatgggacaaaattgagacattttatagttag 35127859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 7e-84; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12934041 - 12933796
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    |||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||  ||  |||| ||||||||||||||||| ||| |||||||    
T  12934041 atgggggaaaaaattaggtctttgtggtttattataagttacaatagatccctccatgatccaacggtcttcatttataaaaaagatcaaaacgttaaaa 12933942  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||  |||||||| |||| |||||||||| |    
T  12933941 atgaaagatttaataaggtttatggtggatcacctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacg 12933842  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  12933841 gcagaagacttatgagatcaaattgagacactttatagttagggga 12933796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12948202 - 12947957
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    |||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||  ||  |||| ||||||||||||||||| ||| |||||||    
T  12948202 atgggggaaaaaattaggtctttgtggtttattataagttacaatagatccctccatgatccaacggtcttcatttataaaaaagatcaaaacgttaaaa 12948103  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||  |||||||| |||| |||||||||| |    
T  12948102 atgaaagatttaataaggtttatggtggatcacctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacg 12948003  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
     || ||||||||||||| |||||||||||||||||| |||||||||    
T  12948002 acataagacttatgagatcaaattgagacactttatagttagggga 12947957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 47 - 247
Target Start/End: Original strand, 19525160 - 19525360
Alignment:
Q  47 gatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgat 146  Q
    ||||||||||||||  ||  ||||||||||| |||||||||| ||  |||||||||    |||||||| |||| ||||||||| ||| |||||||||| |    
T  19525160 gatccctccatgatccaacggtctccatttaaaaaaaagatcaaacagttaaaaatatgtgatttaataaggtctatggtggaccacatataaagttggt 19525259  T
Q  147 tcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||||||| |||||| ||||||||| |||||| | ||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  19525260 tcaccatagaaatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagttagggga 19525359  T
Q  247 c 247  Q
    |    
T  19525360 c 19525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 32734415 - 32734190
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||  ||  ||||||||||  |||||| ||| ||  ||||||||| |||    
T  32734415 gaaaaaattaggtgtttgtggtttattataagctacaatagatccctccatgatccaacggtctccattttaaaaaaatatcaaactgttaaaaataaaa 32734316  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
    |||||||| |||| |||||||||  | |||| ||| |  |||||| |||| ||||||  ||||||||||||||||||||||||||| ||||| | |||||    
T  32734315 gatttaataaggtctatggtggactatctattaaggttgttcaccttagatatttaagattaaaaactaacggaaatgaccaaaatagtaaacgacagaa 32734216  T
Q  207 gacttatgagaccaaattgagacact 232  Q
    || ||||| ||||||||| |||||||    
T  32734215 gagttatgggaccaaattaagacact 32734190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 40058309 - 40058063
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccattt-ataaaaaagatcgaaaggttaaa 99  Q
    |||||| |||||||||| ||||| ||||| |||| ||| ||  |||||| |||| |||||  ||  |||||||||| | |||||||||| ||  ||||||    
T  40058309 atggagaaaaaaattagttgtttctggttaattacaagctacaatagattcctctatgatccaacggtctccattttaaaaaaaagatcaaacagttaaa 40058210  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||||| |||| |||||||||  || |||||||||| |||||| |||| ||||||  ||||||||||||||| |||||||||||||||||     
T  40058209 aataaaagatttaataaggtctatggtggactacttataaagttggttcaccttagacatttaagattaaaaactaacggagatgaccaaaatggtaaac 40058110  T
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| |||||||||||| |||| |||||| || |||| ||||    
T  40058109 ggcagaagagttatgagaccaatttgaaacacttaatagttaaggga 40058063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2167340 - 2167572
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaaga-tcgaaaggttaaa 99  Q
    ||||||||||||||||||||||||||||| |||||||  ||  ||||||| |||  ||||  ||| ||||||||||| |||||| | || || ||||||     
T  2167340 atggaggaaaaaattaggtgtttgtggttcattataaactacaatagatctctcattgatccaatggtctccatttaaaaaaaaaaatcaaacggttaat 2167439  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||||| |||| ||||||||| || ||||||||||| |||||| |||| |||||| ||||||||||||| || | |||||||||  ||||     
T  2167440 aataaaagatttaataaggtctatggtggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacagaga-gaccaaaataataaac 2167538  T
Q  200 ggcagaagacttatgagaccaaattgagacactt 233  Q
    ||||||||| ||||| ||||||||||| ||||||    
T  2167539 ggcagaagatttatgggaccaaattgaaacactt 2167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5383231 - 5382997
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaa-gatcgaaaggttaaa 99  Q
    ||||||||||||||| |||||||||||||  ||||||| ||  |||||||||||||||||   ||  ||| |||||| |||||| | || || |  |||     
T  5383231 atggaggaaaaaatttggtgtttgtggttcgttataagctacaatagatccctccatgatc--atgatcttcatttaaaaaaaaagttcaaacgactaag 5383134  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||| | || |||||| |||||     
T  5383133 aataaaagatttaataaggtctatggtggaccacctataaagttgattcaccttagacatttaaggttaaaaactaacggagaggatcaaaatagtaaac 5383034  T
Q  200 ggcagaagacttatgagaccaaattgagacactttat 236  Q
    | |  |||| ||||| |||||||||||||||||||||    
T  5383033 gaccaaagatttatgggaccaaattgagacactttat 5382997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 247
Target Start/End: Complemental strand, 223440 - 223270
Alignment:
Q  77 ataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaa 176  Q
    |||||||||||| || |||| ||| | ||| ||||||| | || |||||| || |||||| ||||||| |||||| |||| ||||||  |||||||||||    
T  223440 ataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaa 223341  T
Q  177 cggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     ||||| ||||| | | ||||| ||  ||||||||||| ||||||||| | ||||||||| ||||||||||    
T  223340 tggaaaggaccacattagtaaacggaggaagacttatgggaccaaattaatacactttatagttaggggac 223270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 42980702 - 42980775
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||| ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  42980702 aaaaattaacggaaaggaccaaaatggtaaatggcagaagatatatgagaccaaattgagacactttatagtta 42980775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 12936095 - 12936174
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||||||| ||||||||||    
T  12936095 aaaaacaaacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggggac 12936174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 42510257 - 42510158
Alignment:
Q  148 caccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| |||| | |||||||||||||||| |  |||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  42510257 caccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggac 42510158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 15856708 - 15856592
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| | |||| |||| |||||  ||||||||| |||| ||||||||||||||||||| ||||||||| |||||     
T  15856708 aggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacaaacgaaaatgaccaaaatggtaaacggcagaagagttatg- 15856610  T
Q  216 gaccaaattgagacactt 233  Q
    || |||||||| ||||||    
T  15856609 gatcaaattgatacactt 15856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 38471573 - 38471345
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa-atgaaa 106  Q
    ||||||||||||| |||||||| |||||||| ||  ||||||||||| |||||  || | ||| |||||  |||||||||| || |||||||| |  |||    
T  38471573 aaaaaattaggtggttgtggttcattataagctacaatagatccctctatgatccaacaatcttcattttaaaaaaagatcaaacggttaaaataaaaaa 38471474  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
     |  |||| | || |||||| || |||||||||||||| |||||| || | |||||| |||||||| |||| || |  |||||||| ||||| || ||||    
T  38471473 taaataataaagtctatggtagaccacctataaagttggttcaccttaaacatttaaggttaaaaattaacagagagaaccaaaatagtaaacggaagaa 38471374  T
Q  207 gacttatgagaccaaattgagacacttta 235  Q
    || |||||  |||||||||| ||| ||||    
T  38471373 gatttatggaaccaaattgaaacaattta 38471345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 12950253 - 12950332
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||||||||||||||||||||||   || |||||||||  ||||||||||||||||||||| ||||||||||    
T  12950253 aaaaacaaacggaaatgaccaaaatggtaaacatcataagacttattggaccaaattgagacactttatagttaggggac 12950332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 24761703 - 24761620
Alignment:
Q  67 gtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcac 150  Q
    ||||||||||| |||||||||| ||  ||||||||| |||||||||||  ||||||||||||| |||||||||||||| |||||    
T  24761703 gtctccatttaaaaaaaagatcaaacagttaaaaataaaagatttaatacggtttatggtggaccacctataaagttggttcac 24761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 12830879 - 12831009
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| ||||||  ||| |||||  |||||||| ||||||| | ||||||||| |||||  |||||||| ||||      
T  12830879 aggtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttatag 12830978  T
Q  216 gaccaaattgagacactttattgttagggga 246  Q
    |||||||||||||||||| || |||| ||||    
T  12830979 gaccaaattgagacacttaatagttaaggga 12831009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 12862859 - 12862989
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| ||||||  ||| |||||  |||||||| ||||||| | ||||||||| |||||  |||||||| ||||      
T  12862859 aggtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaacagcagaagagttatag 12862958  T
Q  216 gaccaaattgagacactttattgttagggga 246  Q
    |||||||||||||||||| || |||| ||||    
T  12862959 gaccaaattgagacacttaatagttaaggga 12862989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 7426851 - 7426699
Alignment:
Q  81 aaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgga 180  Q
    |||| ||| ||||||| ||| | ||| ||||||| |||| ||||||||| ||||| ||||  ||||||||| |||| |||| |||||||||| | |||||    
T  7426851 aaaaaatcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccacctttaaatatgattcaccttagacatttgatgttaaaaattgacgga 7426752  T
Q  181 aatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    || ||  ||||  ||||||||||| |||||||||  |||| ||||| ||||||    
T  7426751 aaggaataaaacagtaaatggcagtagacttatggaaccatattgacacactt 7426699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 5384339 - 5384417
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||| | ||||||||| ||||| ||  ||||| ||||| ||||||||||||||||||||| |||||||||    
T  5384339 aaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacactttatagttagggga 5384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 21387807 - 21387681
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||| | ||||| ||||  || |||||| ||||| ||| ||||||||||||||| || | ||||||||  |  || ||||||||| ||||| |||||    
T  21387807 tatggtgaaccacctttaaatatgtttcaccttagagttttgatgttaaaaactaacagacaggaccaaaagaggtaacggcagaagatttatgggacca 21387708  T
Q  221 aattgagacactttattgttaggggac 247  Q
    |||||||||| ||||| ||||||||||    
T  21387707 aattgagacattttatagttaggggac 21387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 22819467 - 22819564
Alignment:
Q  125 gtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaa 222  Q
    ||||| ||||||| | |||| |||||| |||| || ||  |||||||||||||||| ||||||||||| ||||| ||||||||| ||||| |||||||    
T  22819467 gtggaccacctatcatgttggttcaccttagatatatagggttaaaaactaacggagatgaccaaaatagtaaacggcagaagagttatgggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 19827133 - 19827201
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    |||||| ||||||  |||||||||||||||| || |||||| ||||| |||||||||||||||||||||    
T  19827133 aaaaacaaacggatgtgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttat 19827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 224619 - 224662
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  224619 gaagacttatgagaccaaattgagacactttatagttaggggac 224662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 4567964 - 4568046
Alignment:
Q  165 gttaaaaactaacggaaatgaccaaaat-ggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||  ||||||| ||||||||||| |||||| |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  4567964 gttaaaatgtaacggagatgaccaaaataggtaaa-ggcagaagacataagggaccaaattgagacactttatagttaggggac 4568046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 15857611 - 15857690
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| ||||||||||||||||| | || |||| ||||| || |||||||| ||||||||| |||| |||||    
T  15857611 aaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacactttatagttaagggac 15857690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 19524105 - 19524027
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| |||||| ||||||||||||||||| | ||||| | |||| |||||||||||||||||||||| |||| |||||    
T  19524105 aaaaacaaacggacatgaccaaaatggtaaacgacagaaaatttat-agaccaaattgagacactttatagttaagggac 19524027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 38473548 - 38473615
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    ||||| ||||||||||||||||||| ||||| | ||||||| ||||| ||||||||| ||||||||||    
T  38473548 aaaaattaacggaaatgaccaaaatagtaaacgacagaagatttatgggaccaaattaagacacttta 38473615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 15613628 - 15613554
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||| ||||||| | ||||||||| ||||| || |||||| ||||| ||||||||||||||||||||| |||||    
T  15613628 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagttag 15613554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 18678083 - 18678021
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||||| |||||| | ||||||| ||||| ||||||||||||||||||||| |||||||||    
T  18678083 gaccaaaacggtaaacgacagaagatttatgggaccaaattgagacactttatagttagggga 18678021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 18695640 - 18695718
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||| ||||||| | | ||||| ||  ||||||||||| ||||||||||||||||||||| |||| ||||    
T  18695640 aaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaaattgagacactttatagttaaggga 18695718  T

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Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 5975843 - 5975800
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  5975843 gaagacttatgagaccaaattgagacactttataattaggggac 5975800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 10085842 - 10085905
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    ||||||||| | ||||||||| |||||| |||||||| ||||| ||||||||||| ||||||||    
T  10085842 actaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacacttta 10085905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 22819558 - 22819620
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| ||||| ||||||||| ||||| |||||||||||||||||| || |||| ||||    
T  22819558 gaccaaaatagtaaacggcagaagagttatgggaccaaattgagacacttaatagttaaggga 22819620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 1273212 - 1273139
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    |||||||||||||   ||||||||| |||||  |||||||| ||||| ||||||||||||||| ||||| ||||    
T  1273212 aaaaactaacggaggggaccaaaattgtaaactgcagaagatttatgggaccaaattgagacattttatagtta 1273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 15509312 - 15509239
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | ||||||||| |  || |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagttaggggac 15509239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 15614955 - 15615032
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || | ||||||||| ||||| ||||||| | |||||  |||||||||||||||||||| ||||| ||||    
T  15614955 aaactaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagttagcggac 15615032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 42979564 - 42979492
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| | ||||||||| ||||| ||||||||| ||||  ||||||||||| ||||||||| ||||| ||||    
T  42979564 aacggagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagttagaggac 42979492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 1663304 - 1663237
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||| | ||||||||| ||||| ||||||||| ||||  ||||||||| ||||||||||| ||||    
T  1663304 taacggagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacactttatagtta 1663237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 24761720 - 24761779
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    ||||||| | || |||||||||||| |||||| || |||||||| |||||||||||||||    
T  24761720 taacggagaggaacaaaatggtaaacggcagacgagttatgagatcaaattgagacactt 24761779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 5977046 - 5977147
Alignment:
Q  148 caccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgag--acactttattgttagggg 245  Q
    |||| |||| ||||||  |||||||||||| |||| ||||| | | ||||| ||  ||| ||||||| ||||||||||||  ||||||||| ||||||||    
T  5977046 caccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacggatgaatacttatgggaccaaattgagacacactttatagttagggg 5977145  T
Q  246 ac 247  Q
    ||    
T  5977146 ac 5977147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 14210354 - 14210257
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaac 177  Q
    |||||||||| ||||||||||| | ||| |||||||||||| |||| |||| ||| ||||| |||  ||||||  ||| |||||  |||||||||||||    
T  14210354 aaaaaagatcaaaaggttaaaa-taaaaaatttaatgaggtctatgatggaccacttataatgttagttcacctaagatatttagggttaaaaactaac 14210257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 15510288 - 15510334
Alignment:
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||||||| || | ||||||||||||||||||||| |||||||||    
T  15510288 ggcagaagacataagggaccaaattgagacactttatagttagggga 15510334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 27894033 - 27894095
Alignment:
Q  185 accaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| ||||| | | ||| | ||||||||||||||||| ||||||||| ||||||||||    
T  27894033 accaaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttaggggac 27894095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 18693843 - 18693742
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| ||||| ||| ||||||||||||||| || | ||||||||  |  || | ||||||| ||||| ||||| ||||||||| ||||| |||| |||    
T  18693843 ttcaccttagagttttgatgttaaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaaggg 18693744  T
Q  246 ac 247  Q
    ||    
T  18693743 ac 18693742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 20988811 - 20988734
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| | ||||||||  |  || |||| ||||| || ||||| ||||||||||||||||| ||||||||||    
T  20988811 aaactaacggagaggaccaaaagaggtaacggcacaagacataagagactaaattgagacactttatagttaggggac 20988734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 26404219 - 26404276
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||||| ||||||| || |||| ||||| || |||||||||||||||||| ||||    
T  26404219 gaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagtta 26404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 4567040 - 4566996
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||||| || | ||||||||||||||||||||| |||||||||    
T  4567040 cagaagacataagggaccaaattgagacactttatagttagggga 4566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 21389136 - 21389200
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacact 232  Q
    ||||||||||||| | ||||| | | ||||| ||  ||||||||||| |||||||||||||||||    
T  21389136 aaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagacact 21389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 7037249 - 7037010
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    |||||||||||||| |||||||||| ||||  ||  ||||||| |||||||||  ||  |||||| |||| |||||||||| || |||||||||||||||    
T  7037249 aaaaaattaggtgtgtgtggtttataataacctacaatagatctctccatgatccaacggtctccttttaaaaaaaagatcaaacggttaaaaatgaaag 7037150  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||    
T  7037149 atttaataaggtttacggtggatcacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggcagaag 7037050  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| ||||||||||| ||||||||| |||| |||||    
T  7037049 acttatgggaccaaattgaaacactttatagttaagggac 7037010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 11575326 - 11575503
Alignment:
Q  14 ttaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaa 113  Q
    |||||| |||||||||||||||||| ||  |||||||||| ||||||  ||  ||||||||||| |||||||||| || ||||| |||||||||||||||    
T  11575326 ttaggtatttgtggtttattataagctacaatagatcccttcatgatccaactgtctccattta-aaaaaagatcaaacggttagaaatgaaagatttaa 11575424  T
Q  114 tgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    | |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||||| |||||||||    
T  11575425 taaggtttatggtggatcacctataaagttgattcaccttagacatttaaggttaaaaacaaacggaaaggaccaaaat 11575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 12959533 - 12959777
Alignment:
Q  4 gaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttat-aaaaaagatcgaaaggttaaaaat 102  Q
    ||||||||||||||||||||||| || |||||||| ||  |||||||||| ||||||  || ||||||| ||||  |||||||||| |||||||||||||    
T  12959533 gaggaaaaaattaggtgtttgtgattcattataaggtacaatagatcccttcatgatccaacagtctccgtttaacaaaaaagatcaaaaggttaaaaat 12959632  T
Q  103 gaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggc 202  Q
        |||||||| |||| ||| ||||| |||||||||||||| |||||| |||| |||||| |||||| || |||||| | || ||||| |||||| |||    
T  12959633 atgtgatttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaagacaaacggagaggatcaaaaaggtaaacggc 12959732  T
Q  203 agaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||  ||| |||||||||||||||||||||| |||||    
T  12959733 agaagatttatcggactaaattgagacactttattgttaagggac 12959777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 10367530 - 10367289
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttat-aaaaaagatcgaaaggttaaa 99  Q
    |||||||||||||||||||||||||| || |||||||| ||  |||||| ||| ||||||  ||  |||||| ||||  |||||||||| || |||||||    
T  10367530 atggaggaaaaaattaggtgtttgtgattcattataagctacaatagattccttcatgatccaacggtctccgtttaacaaaaaagatcaaacggttaaa 10367431  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    | |    |||||||| |||| ||| ||||| |||||||||||||| |||||| |||| |||||| ||||||||| |||||| | ||| |||| ||||||     
T  10367430 agtatgtgatttaataaggtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagacgactaaaaaggtaaac 10367331  T
Q  200 ggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  10367330 ggcagaagacttatgagactaaattgagacactttatagtta 10367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 14509499 - 14509253
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||||||||||||||||||| |||| ||| ||   |||||| || | ||||  || |||||||| ||| |||||| ||| || ||||||||    
T  14509499 atggaggaaaaaattaggtgtttgtggttcattacaagctacagtagatctctacttgatccaacagtctccaattaaaaaaaatatcaaacggttaaaa 14509400  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    || |||| |||||| |||| ||||||||| |||||||||||||| || ||| |||| |||||| |||||||| ||||||| | ||||||||| ||||| |    
T  14509399 ataaaaggtttaataaggtctatggtggaccacctataaagttggtttaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaacg 14509300  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     ||||||| ||||| |||| |||| | ||||||||| |||| |||||    
T  14509299 acagaagatttatgggaccgaattaaaacactttatagttaagggac 14509253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 37868872 - 37869112
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttat-aaaaaagatcgaaaggttaaaaatgaaa 106  Q
    ||||||||||||||||||| || |||||||| ||  |||||||||| ||||||  || | ||||| ||||  |||||||||| || |||||||| |        
T  37868872 aaaaaattaggtgtttgtgattcattataagctacaatagatcccttcatgatccaacaatctccgtttaacaaaaaagatcaaacggttaaaagtatgt 37868971  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
    |||||||| |||| ||| ||||| ||||||||||||||  ||||| |||| |||||| ||||||||| |||||| | |||||||| |||||| | |||||    
T  37868972 gatttaataaggtctattgtggaccacctataaagttggctcaccttagacatttaaggttaaaaacaaacggagaagaccaaaaaggtaaacgacagaa 37869071  T
Q  207 gacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||| ||||||||||||||||| |||| |||||    
T  37869072 gacttatgagactaaattgagacactttatagttaagggac 37869112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 35799795 - 35799556
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccattt-ataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    ||||||||||||| ||||||||||||||||  ||  || ||||||||||||||  || | |||  |||| | |||||||||| || |||||||| |  ||    
T  35799795 aaaaaattaggtggttgtggtttattataaactacaat-gatccctccatgatccaacaatcttaattttaaaaaaaagatcaaacggttaaaattataa 35799697  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
     ||||||| | || |||||| || ||| ||||||||||||||||| |||| |||||| ||||||| |||||||| | |||||||  |||||| || ||||    
T  35799696 catttaataaagtctatggtagaccacttataaagttgattcaccttagacatttaaggttaaaagctaacggagaggaccaaagaggtaaacggaagaa 35799597  T
Q  207 gacttatgagaccaaattgagacactttattgttaggggac 247  Q
     | ||||||||||||||||||||||||||| ||||||||||    
T  35799596 aagttatgagaccaaattgagacactttatagttaggggac 35799556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 74 - 247
Target Start/End: Original strand, 25570769 - 25570942
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaac 173  Q
    |||| |||||||||| ||   |||||||| ||| ||||||| |||| ||||||||| |||||||||||||| |||||| |||| ||||||  ||||||||    
T  25570769 tttaaaaaaaagatcaaacctttaaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaagtttaaaaac 25570868  T
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||| ||||| ||||||||  |||||||||||  | |||||||| |||||| || |||| |||||    
T  25570869 taacggaaaggactaaaatagtaaatggaggaagacttatggaatcaaattgaaacacttaatagttaagggac 25570942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 23177802 - 23177720
Alignment:
Q  163 atgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  23177802 atgttaaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggg 23177720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 23589059 - 23588977
Alignment:
Q  163 atgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  23589059 atgttaaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggg 23588977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 4829652 - 4829509
Alignment:
Q  103 gaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggc 202  Q
    |||||||||| |||||| ||||||||| |||||||||||||| || ||| |||| |||||| |||||| |||||| || | ||||||||| ||||| | |    
T  4829652 gaaagattta-tgaggtctatggtggaccacctataaagttggtttaccttagatatttaaggttaaacactaacagagaggaccaaaatagtaaacgac 4829554  T
Q  203 agaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    | |||| |||||||| |||||||||||| ||||| |||| |||||    
T  4829553 ataagatttatgagatcaaattgagacattttatagttaagggac 4829509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 247
Target Start/End: Complemental strand, 12853084 - 12852930
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| |||||||  ||| ||||||| | ||||| ||||  || |||||| ||||  ||| ||||||||| |||||||| |||||||||||    
T  12853084 ggttaaaattcaaaaatttaatacggtctatggtgaaccacctttaaatatggttcaccttagatttttgatgttaaaatctaacggagatgaccaaaat 12852985  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     ||||| |  |||||| ||||| ||||||||||||||||||||| ||||||||||    
T  12852984 agtaaacgatagaagatttatgggaccaaattgagacactttatagttaggggac 12852930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 7490090 - 7490256
Alignment:
Q  68 tctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgtt 167  Q
    |||||||| | |||||||||| ||  ||||||||  ||||||| ||  ||||||||||||| |||| |||||||||  |||||| |||| |||||| |||    
T  7490090 tctccattaaaaaaaaagatcaaaccgttaaaaa--aaagattcaacaaggtttatggtgggtcacttataaagtttgttcaccttagacatttaaggtt 7490187  T
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||||||| | ||||||||| |||||    | |||| ||||| ||||||||||||||| |||||    
T  7490188 aaaaactaacggataagaccaaaatagtaaacaataaaagatttatgggaccaaattgagacattttat 7490256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 28109816 - 28109935
Alignment:
Q  122 atggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaa 221  Q
    |||||||| |||||| ||||||| |||||| |||| |||||| |||||||| ||||||| | |||||||||||||||   ||||| | ||||| ||||||    
T  28109816 atggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagaggaccaaaatggtaaactacagaaaagttatgggaccaa 28109915  T
Q  222 attgagacactttattgtta 241  Q
    ||||||| ||||||| ||||    
T  28109916 attgagatactttatcgtta 28109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 12958539 - 12958461
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| ||||||||||||||||||| ||||||| |||| | ||||| ||||||||||||||||||||| |||||||||    
T  12958539 aaaaacaaacggaaatgaccaaaatgataaatggaagaaaatttatgggaccaaattgagacactttatagttagggga 12958461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 3532364 - 3532252
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||| ||||  || |||||| || | |||||||||||||||  ||| || ||||| ||||| ||||||| || |||||||||| |||||    
T  3532364 tatggtggaccacctttaaatatggttcaccttaaacatttaatgttaaaaatcaacagagatgactaaaatagtaaatgacaaaagacttatgtgacca 3532265  T
Q  221 aattgagacactt 233  Q
    |||||| ||||||    
T  3532264 aattgacacactt 3532252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 15850605 - 15850725
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||||||| |||| |||||| |||| |||||  |||||||||||||| |   ||||||||| |  ||  |||||||| |||||||||||    
T  15850605 tatggtggaccacctataatgttggttcaccttagacatttagggttaaaaactaacgaagtggaccaaaataggtaacagcagaagagttatgagacca 15850704  T
Q  221 aattgagacactttattgtta 241  Q
    |||||| ||| ||||| ||||    
T  15850705 aattgaaacattttatagtta 15850725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 42249621 - 42249843
Alignment:
Q  12 aattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagattt 111  Q
    ||||||||| |||| ||| |||||||| ||  |||||| ||||| ||||  || | ||| ||||| ||||||||||| || |||||||| | ||| ||||    
T  42249621 aattaggtggttgttgttcattataagctacaatagattcctccgtgatccaacaatcttcatttttaaaaaagatcaaacggttaaaattaaaaaattt 42249720  T
Q  112 aatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagactt 211  Q
    ||| |  | |||||| |||| | ||| |||||| |||||| |||| |||||| |||||||| |||| ||   ||||| ||| ||||| || |||||| ||    
T  42249721 aataaaatctatggtagatc-cttat-aagttggttcaccttagacatttaaggttaaaaaataacagaggagaccacaattgtaaacggtagaagagtt 42249818  T
Q  212 atgagaccaaattgagacactttat 236  Q
    ||  ||| |||||||||||||||||    
T  42249819 ataggactaaattgagacactttat 42249843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 6707049 - 6706970
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||   ||||||||| ||||| || |||||| |||||  |||||||||||||||||||| ||||||||||    
T  6707049 aaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggac 6706970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 15650560 - 15650485
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| ||||| | || |||| ||| || |||||||||||||||||||| ||||||||||    
T  15650560 actaacggagatgaccaaaatagtaaacgacataagatttaagataccaaattgagacactttatagttaggggac 15650485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 1624969 - 1625043
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||| ||||||| | ||||||||| |||||||||| |||| ||||  ||||||||||||||||||||| |||||    
T  1624969 aaaaattaacggagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacactttatagttag 1625043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 10368378 - 10368456
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| |||||| |||||||||||| |||| || |||| | ||||| || |||||||||||||||||| |||||||||    
T  10368378 aaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacactttatagttagggga 10368456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 35801038 - 35801116
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||| ||||||| | ||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||| |||| ||||    
T  35801038 aaaaattaacggagaggaccaaagtggtaaatggcagaagagttaggggaccaaattgaaacactttatagttaaggga 35801116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 2581922 - 2581848
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| | |||||| || ||||| |||  |||| ||||| ||||||||||||||||||||| |||||||||    
T  2581922 actaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagttagggga 2581848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 2583576 - 2583618
Alignment:
Q  205 aagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  2583576 aagatttatgagaccaaattgagacactttatagttaggggac 2583618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 21012073 - 21012151
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||| ||||||||||| ||||| | | ||||| ||  | ||||||||||| ||||||||| |||||||||    
T  21012073 aaaaactaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttatagttagggga 21012151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 7983628 - 7983753
Alignment:
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| || | ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||| | ||| ||| ||| ||||  ||||| || |||||    
T  7983628 atttaataagatctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaattgacgaaaaggactaaaacagtaaacggtagaag 7983727  T
Q  208 acttatgagaccaaattgagacactt 233  Q
    ||||||  ||||||||||| ||||||    
T  7983728 acttataggaccaaattgacacactt 7983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 29424527 - 29424684
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | ||| ||||||| |||| |||| |||| ||||| ||||  || |||| | |||| |||| ||||||  ||||||| || | ||||||    
T  29424527 aaaggttaaaatttaaaaatttaataaggtctatgatggaccacctttaaacatggttcatcttagacatttgatgttagtaactaacagagaggaccaa 29424626  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||   |||| ||||||| | | | | ||||||||||| ||||||||| ||||||||||    
T  29424627 aacaataaacggcagaatattcaagggaccaaattgaaacactttatagttaggggac 29424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 2305661 - 2305585
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||| | ||||||||  |  || |||||||||| || | ||||||||||||||||||||| |||||||||    
T  2305661 aaactaacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttagggga 2305585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 8537289 - 8537111
Alignment:
Q  12 aattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagattt 111  Q
    ||||||||| |||||||| ||||||||  |  ||||||||||  ||||| |||   ||| |||||| |||||||||| || |||||||| | ||   |||    
T  8537289 aattaggtgattgtggttcattataagcaaa-atagatccctttatgatctaacgatcttcattta-aaaaaagatcaaatggttaaaattaaatttttt 8537192  T
Q  112 aatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    ||| | || ||||||| | ||| || ||||||| | || | |||| |||||| |||||||||||||||| |||||||||||    
T  8537191 aataaagtctatggtgaaccacttaaaaagttggtacatcttagacatttaaggttaaaaactaacggagatgaccaaaat 8537111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 40174757 - 40174821
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacact 232  Q
    ||||||||||||| ||||||||||| |||||   ||||||| ||||| ||||||||||| |||||    
T  40174757 aaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaaattgaaacact 40174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 3533623 - 3533698
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||| | |||| ||||| | || |||| ||||||||||||||||| |||||| || |||| |||||    
T  3533623 actaacggaaatgatcgaaatagtaaacgacaaaagatttatgagaccaaattgacacacttaatagttaagggac 3533698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 12854125 - 12854176
Alignment:
Q  196 aaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  12854125 aaatagcagaagatttatgggaccaaattgagacactttatagttaagggac 12854176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 23233593 - 23233648
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtgga 129  Q
    |||||||||||||||||| |||||||| | ||||| ||||| | ||||||||||||    
T  23233593 tttataaaaaagatcgaacggttaaaattaaaagaattaataaagtttatggtgga 23233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 4630114 - 4630156
Alignment:
Q  205 aagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| || ||||||||||||||||||||||| ||||||||||    
T  4630114 aagacataagagaccaaattgagacactttatagttaggggac 4630156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 14714662 - 14714592
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaa 191  Q
    ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||||||||    
T  14714662 tatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaa 14714592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 37867879 - 37867801
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| ||| || |||||||||||| |||| |  |||| | || || ||||||||||||||||||||| |||||||||    
T  37867879 aaaaacaaacagacatgaccaaaatgataaacgaaagaaaatttgtgggaccaaattgagacactttatagttagggga 37867801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 42028955 - 42029025
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||||||| | ||||||||| ||||  | ||||||| ||||| |||||||| |||||||||||| |||||    
T  42028955 actaacggagaagaccaaaatagtaagcgacagaagaattatgggaccaaatcgagacactttatagttag 42029025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 42246714 - 42246636
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||| ||| ||||||||| ||||| || | |||| ||||| || |||||||| |||||||||  ||||||||    
T  42246714 aaaaactaacgaaaaggaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacactttataattagggga 42246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 14510516 - 14510581
Alignment:
Q  182 atgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||| ||||| ||||||||| ||||  |||||||||||||||||| || |||| |||||    
T  14510516 atgactaaaatagtaaacggcagaagagttataggaccaaattgagacacttaatagttaagggac 14510581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 6140193 - 6140413
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||  ||  ||||||||||| |||||||||| ||  ||||||||| ||||    
T  6140193 aaaaaattaggtgtttgtggtttattataagctacaatagatccctccatgatccaacggtctccatttaaaaaaaagatcaaactgttaaaaataaaag 6140292  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| |||| |||||||||  ||||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||| ||||| | ||||||    
T  6140293 atttaataaggtctatggtggactacctataaagttggttcaccttagatatttaaggttaaaaactaacggaaatgaccaaaatagtaaacgacagaag 6140392  T
Q  208 acttatgagaccaaattgaga 228  Q
    | |||||  ||||||||||||    
T  6140393 agttatggaaccaaattgaga 6140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 31712339 - 31712567
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    |||||||||||||| |||||||||| ||||  ||  ||||||| |||||||||  ||  |||||| |||| |||||||||| || |||| ||||||||||    
T  31712339 aaaaaattaggtgtatgtggtttataataacctacaatagatctctccatgatccaacggtctccttttaaaaaaaagatcaaacggtttaaaatgaaag 31712438  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| ||||||| | |||||||||||||||||||||||||| |||| |||||| ||||||||  |||||||||||||||||||||||| || |||||    
T  31712439 atttaataaggtttacgatggatcacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggaagaag 31712538  T
Q  208 acttatgagaccaaattgagacactttat 236  Q
    ||||||| || |||||||| |||||||||    
T  31712539 acttatgggatcaaattgaaacactttat 31712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 52660040 - 52660282
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||  |  ||||||  |||||||||  ||  ||||||||||| || ||||||| ||  |||||||    
T  52660040 atggaggaaaaaattaggtgtttgtggtttattgtaagcaacaatagatttctccatgatccaacggtctccatttaaaacaaagatcaaacagttaaaa 52660139  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    |||||||||||||| | ||||||||||||||| | ||||| ||||||||||  ||| |||||| ||||||||| ||| ||||||| |||||||||||| |    
T  52660140 atgaaagatttaataaagtttatggtggatcatcaataaaattgattcacctaagacatttaaggttaaaaacaaacagaaatgatcaaaatggtaaacg 52660239  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
    |||||||| ||||| |||| |||| ||| ||||||| ||||||    
T  52660240 gcagaagatttatgggaccgaattaagatactttatagttagg 52660282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 233
Target Start/End: Complemental strand, 50530787 - 50530561
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||||||||||||||||||||  ||  |||||||||||||||||  || |||||||||||| || ||||||||||  ||||||||| |||    
T  50530787 gaaaaaattaggtgtttgtggtttattataaactacaatagatccctccatgatccaacagtctccatttaaaataaagatcgaaccgttaaaaataaaa 50530688  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
     ||||||| |||| |||||||||  ||||||||||||| |||||| ||||  ||||| |||||||| |||| |||||||||||||| ||||| |  ||||    
T  50530687 aatttaataaggtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacgatagaa 50530588  T
Q  207 gacttatgagaccaaattgagacactt 233  Q
    || ||||| |||||  |||||||||||    
T  50530587 gagttatgggaccattttgagacactt 50530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 28102356 - 28102154
Alignment:
Q  3 ggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaat 102  Q
    ||||||||||||||||||| |||||||||| ||||  ||  ||||||| |||||||||  ||  |||||| |||| ||||||         |||||||||    
T  28102356 ggaggaaaaaattaggtgtgtgtggtttataataacctacaatagatctctccatgatccaacggtctccttttaaaaaaaaa--------gttaaaaat 28102265  T
Q  103 gaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggc 202  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||    
T  28102264 gaaatatttaataaggtttacggtggatcacctataaagttgattcaccttagacatttaaggttaaaaataaacggaaatgaccaaaatggtaaacggc 28102165  T
Q  203 agaagacttat 213  Q
    |||||||||||    
T  28102164 agaagacttat 28102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 29663817 - 29663689
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||||||||||||| ||||||||| |||| |||||| |||| ||||||||||||||   |||||||| || |||||||||||| ||||||||| |||||     
T  29663817 aggtttatggtggaccacctataatgttggttcaccttagacatttaatgttaaaattaaacggaaaagatcaaaatggtaaacggcagaagagttatgg 29663718  T
Q  216 gaccaaattgagacactttattgttaggg 244  Q
    ||||||||||||||| ||||| |||||||    
T  29663717 gaccaaattgagacaatttatagttaggg 29663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 11113866 - 11113786
Alignment:
Q  167 taaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  11113866 taaaaactaacggaaatgaccaaaatggtaaacggcagaagagttatgagaccaaattgagacactttatagttaagggac 11113786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 11114884 - 11115052
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacg 178  Q
    |||||||||| ||  ||||||| | ||| ||||||| | || |||||| || |||||| ||||||| |||| | |||| |||||| ||||||||||||||    
T  11114884 aaaaaagatctaacagttaaaattaaaacatttaataaagtctatggtagaccacctacaaagttggttcagcttagacatttaaggttaaaaactaacg 11114983  T
Q  179 gaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || | | ||||||||||||| | ||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  11114984 gagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagttaggggac 11115052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 17319327 - 17319092
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccattt--ataaaaaagatcgaaaggttaaaaatgaa 105  Q
    ||||||||||||| |||| ||| |||||||| ||  ||||| |||||||||||  || | ||| |||||  | |||||||||| || |||||||| | ||    
T  17319327 aaaaaattaggtgattgtagttcattataagctagaatagacccctccatgatccaacaatcttcattttaaaaaaaaagatccaacggttaaaattaaa 17319228  T
Q  106 agatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcaga 205  Q
    | ||||||| | ||||||| | || ||||||  |||||| |||||| |||| |||||| |||||||||||||||  | ||||||||| ||||| | ||||    
T  17319227 aaatttaataaagtttatgatagaccacctaagaagttggttcaccttagacatttaaggttaaaaactaacggtgaagaccaaaatagtaaacgccaga 17319128  T
Q  206 agacttatgagaccaaattgagacactttattgtta 241  Q
    ||| |||||  |||||||||| ||||||||| ||||    
T  17319127 agatttatggaaccaaattgaaacactttatagtta 17319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 38370453 - 38370331
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagattt-aatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacc 219  Q
    ||||||||| |||||| ||||||| |||||| |||  |||| || |||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||    
T  38370453 tatggtggaccacctacaaagttggttcaccttagtcattttaaggttaaaaactaacggagatgaccaaaatggtaaacgacagaagagttatgagacc 38370354  T
Q  220 aaattgagacactttattgttag 242  Q
    ||||||| ||||||||| |||||    
T  38370353 aaattgatacactttatcgttag 38370331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 26393068 - 26393193
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| |||||| |||| ||||| ||||||||||  |||||| || ||||||||||||| | ||||||| |||||     
T  26393068 aggtctatggtggaccacctataatgttggttcaccttagacatttagtgttaaaaacagacggaagtgtccaaaatggtaaacgacagaagagttatgg 26393167  T
Q  216 gaccaaattgagacactttattgtta 241  Q
    ||||||||||||||||||||| ||||    
T  26393168 gaccaaattgagacactttatagtta 26393193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 56000454 - 56000332
Alignment:
Q  124 ggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaat 223  Q
    |||||| ||||||||| |||| | |||| |||| ||||| ||||||||||| | ||||| ||||||||||||||| ||||||||| ||||  ||| ||||    
T  56000454 ggtggaccacctataatgttggtccaccttagacatttagtgttaaaaactgatggaaaagaccaaaatggtaaacggcagaagagttataggactaaat 56000355  T
Q  224 tgagacactttattgttagggga 246  Q
    ||||||||||||| |||||||||    
T  56000354 tgagacactttatagttagggga 56000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 35787997 - 35787840
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | ||| ||||||| | || ||||||||| ||||| ||||  ||||| ||| |||| |||| |||||||||||||||||| | ||||||    
T  35787997 aaaggttaaaatttaaaaatttaataaagtctatggtggaccacctttaaacatgatttaccttagacatttgatgttaaaaactaacggagaggaccaa 35787898  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || |||||| | ||||||| ||||| ||||||||||| ||| ||||| ||||| ||||    
T  35787897 aacggtaaacgacagaagatttatgggaccaaattgaaacattttatagttagaggac 35787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 247
Target Start/End: Original strand, 38555178 - 38555348
Alignment:
Q  77 ataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaa 176  Q
    |||||||||||| || |||| ||| | ||| ||||||| | || |||||| || |||||| ||||||| |||||| |||| ||||||  |||||||||||    
T  38555178 ataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaa 38555277  T
Q  177 cggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||   | ||||| ||  |||||||| || ||||||||| | ||||||||| ||||||||||    
T  38555278 cggaaatgaccacgttagtaaacggaggaagacttctgtgaccaaattaatacactttatagttaggggac 38555348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 21104310 - 21104382
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||    
T  21104310 aacggaaaggaccaaaatggtaaacgacagaagacatatgagaccaaattgagacactttatagttaggggac 21104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 38418963 - 38419075
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||||||||  || |||| | || |  |||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||    
T  38418963 tatggtggaccacctataaatatggttcatcttaaacgtttaatgttaaaaactaacggagatgactaaaacagtaaacggcagaagacttatgagacca 38419062  T
Q  221 aattgagacactt 233  Q
    |||||| ||||||    
T  38419063 aattgacacactt 38419075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 3533549 - 3533676
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| | ||||||| |||| |  ||| |||| ||||| ||||||||||| ||||||| |||||||||||||||  | |||||| ||||      
T  3533549 aggtctatggtggaccgcctataatgttggtcgaccttagacatttagtgttaaaaactgacggaaaggaccaaaatggtaaacagtagaagagttatcg 3533648  T
Q  216 gaccaaattgagacactttattgttagg 243  Q
    ||||||||||||||||||||| ||||||    
T  3533649 gaccaaattgagacactttatagttagg 3533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 28103479 - 28103558
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| |||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||| |||||    
T  28103479 aaaaacaaacggaaaggaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacactttatagttaagggac 28103558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 34438587 - 34438450
Alignment:
Q  110 ttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagac 209  Q
    ||||| |||| |||||||||  | |||||| |||  | ||||||||| |||| | ||||||||||||| || |  |||||||| ||||| |||||||||     
T  34438587 ttaataaggtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacagagagaaccaaaatagtaaacggcagaagat 34438488  T
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||||||||||||| |||| |||||    
T  34438487 ttatgggaccaaattgagacactttatagttaagggac 34438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 48207556 - 48207778
Alignment:
Q  12 aattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagattt 111  Q
    ||||||||| |||| ||| |||||||| ||  |||||||||||| ||||  || | ||| ||||| ||||||||||| || |||||||| | ||| ||||    
T  48207556 aattaggtggttgttgttcattataagctacaatagatccctccgtgatccaacaatcttcatttttaaaaaagatcaaacggttaaaattaaaaaattt 48207655  T
Q  112 aatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagactt 211  Q
    ||| |  | |||||| |||| | ||| |||||| |||||| |||| |||||| |||||||| |||| ||   ||||| ||| ||||| || |||||| ||    
T  48207656 aataaaatctatggtagatc-cttat-aagttggttcaccttagacatttaaggttaaaaaataacagaggggaccacaattgtaaacggtagaagagtt 48207753  T
Q  212 atgagaccaaattgagacactttat 236  Q
    ||  |||||||||||||||||||||    
T  48207754 atatgaccaaattgagacactttat 48207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 33377361 - 33377436
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  33377361 actaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggac 33377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 43419321 - 43419447
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||||||| |||| |||||| || | |||||  |||||||||||||| ||  ||||||||| |  || ||||||||| ||| | |||||    
T  43419321 tatggtggaccacctataatgttggttcaccttatacatttatggttaaaaactaacgaaatagaccaaaataggtaacggcagaagagttaagggacca 43419420  T
Q  221 aattgagacactttattgttaggggac 247  Q
    |||||||||||||||| |||| |||||    
T  43419421 aattgagacactttatagttaagggac 43419447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 31711215 - 31711142
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    |||||| |||||||| || |||||||||||| | || |||||||||||||||||||||||||||||||| ||||    
T  31711215 aaaaacaaacggaaaggatcaaaatggtaaacgacataagacttatgagaccaaattgagacactttatagtta 31711142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 247
Target Start/End: Original strand, 39592188 - 39592361
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaac 173  Q
    |||||| |||| ||| ||||||||||| | ||| ||||||| |||| |||| |||| ||||| ||||  ||  ||||| |||| |||| ||||||||||     
T  39592188 tttatagaaaaaatcaaaaggttaaaatttaaaaatttaataaggtatatgatggaccacctttaaacatggctcaccttagacatttgatgttaaaaat 39592287  T
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| |  |||||||  ||||| | |||||||| ||   |||||| |||||||||||||| ||||||||||    
T  39592288 taacggagagaaccaaaacagtaaacgacagaagacataatggaccaatttgagacactttatagttaggggac 39592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 86970 - 86850
Alignment:
Q  124 ggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaat 223  Q
    |||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||||||||  ||||| ||||||| | ||||| ||||||||    
T  86970 ggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaat 86871  T
Q  224 tgagacactttattgttaggg 244  Q
    |||||  |||||| |||||||    
T  86870 tgagatgctttatagttaggg 86850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 15787164 - 15786997
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagtt-gattcaccatagagatttaatgttaaaaactaac 177  Q
    |||||||||| || |||||||| | ||| ||||||| | ||| ||||| || |||||| |||||| | | |||| |||| |||||| |||||||| ||||    
T  15787164 aaaaaagatcaaatggttaaaa-taaaacatttaataaagttcatggtagaccacctacaaagtttggtgcaccttagacatttaaggttaaaaattaac 15787066  T
Q  178 ggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||| | || || |||| |||| ||||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  15787065 ggagaggatcataatgataaacggcagaaaagttatgggaccaaattgagacagtttatagttagggga 15786997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 46796019 - 46796098
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||| ||| ||||| ||  ||||||||||| ||||||||||||||||||||| ||||||||||    
T  46796019 aaaaactaacggagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggac 46796098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 34439654 - 34439732
Alignment:
Q  169 aaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||| ||| ||||| |||| |||||    
T  34439654 aaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaagggac 34439732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 5687292 - 5687219
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| ||||||||||| ||||| |||| |||| ||||| ||||||||||||||||||||| |||| |||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagttaagggac 5687219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 30682983 - 30683099
Alignment:
Q  131 cacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagaca 230  Q
    |||||||||||||  |||| | || | ||||| ||||||||||||||||| | ||||||||   | || ||| ||||| ||||| |||||||||||||||    
T  30682983 cacctataaagttagttcatcttaaatatttattgttaaaaactaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagaca 30683082  T
Q  231 ctttattgttaggggac 247  Q
    |||||| |||| |||||    
T  30683083 ctttatagttaagggac 30683099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 44159255 - 44159143
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| |||||||||  ||| |||||| |||| |||||   ||||||||||||||| |||||||||||  |||| ||||||||| || ||  ||||    
T  44159255 tatggtggaccacctataatattgtttcaccttagatatttaggattaaaaactaacggagatgaccaaaataataaacggcagaagagttgtggaacca 44159156  T
Q  221 aattgagacactt 233  Q
    |||||| ||||||    
T  44159155 aattgaaacactt 44159143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 1273430 - 1273505
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| | ||| | || |||||||||| ||||||||||||||||||||| ||||||||||    
T  1273430 actaacggagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagttaggggac 1273505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 5688634 - 5688709
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| ||||| | || |||| |||||  |||||||||||||||||||| ||||||||||    
T  5688634 actaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagttaggggac 5688709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 15787511 - 15787574
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||||| |||| || | ||||| ||||||||||||||||||||| ||||||||||    
T  15787511 gaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggac 15787574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 27408871 - 27408812
Alignment:
Q  183 tgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||||| |||||    
T  27408871 tgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttag 27408812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 44302852 - 44302769
Alignment:
Q  159 tttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    |||||||||||||||||||||| | ||||||||  |  |||||||||| | ||||| || |||||||||||||||||| |||||    
T  44302852 tttaatgttaaaaactaacggagaggaccaaaagaggtaatggcagaaaatttatgggatcaaattgagacactttatagttag 44302769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 56296368 - 56296249
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| |||||| || ||||||| | |||| | |||| |||| |||||  ||||||||| ||||||||| |||||||||||||| | || |||| |||||     
T  56296368 aggtctatggtagaccacctatgatgttggtccaccttagacatttagggttaaaaacaaacggaaattaccaaaatggtaaacgacaaaagaattatgg 56296269  T
Q  216 gaccaaattgagacacttta 235  Q
    ||||||||| ||||| ||||    
T  56296268 gaccaaattaagacagttta 56296249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 307798 - 307872
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    |||||| |||||| ||||||| ||| ||||||||  ||||||||||| || |||||||||||||||||| |||||    
T  307798 aaaaaccaacggagatgaccacaatagtaaatggaggaagacttatgggatcaaattgagacactttatagttag 307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 40146616 - 40146689
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||||||||| ||||||| | | ||||  || |||||||||||| ||||||||||||||||||||| ||||    
T  40146616 aaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagtta 40146689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 27410692 - 27410751
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    ||||||||||||||| || |||||| ||||| ||||||||||||||||||||| |||||||    
T  27410692 gaccaaaatggtaaacggaagaagatttatg-gaccaaattgagacactttatagttaggg 27410751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 44304972 - 44305051
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||| ||||||||||| |||||  || ||||| ||||  ||||||||||||||||||| | ||||||||||    
T  44304972 aaaaattaacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacactttgtagttaggggac 44305051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 52659034 - 52658955
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| |||||||||||| ||| ||||||| ||||||||| ||||   |||||||||| ||| ||||| ||||||||||    
T  52659034 aaaaacaaacggaaatgactaaactggtaaacggcagaagatttatagaaccaaattgaaacattttatagttaggggac 52658955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 11094664 - 11094574
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
    |||| |||| |||||||||||||||| | | ||||||||  ||||| ||||||| | ||||  ||||||||| ||||||||||| ||||||    
T  11094664 tagacatttgatgttaaaaactaacgaagaggaccaaaacagtaaacggcagaaaatttataggaccaaattaagacactttatagttagg 11094574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 29687896 - 29687994
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaa 191  Q
    |||||||| | ||| ||||||| ||||||| |||||| ||||| ||||  || ||| || |||| |||| |||||||||||||| ||| ||||||||||    
T  29687896 ggttaaaacttaaaaatttaataaggtttacggtggaccacctttaaatatggttcgccgtagacatttgatgttaaaaactaaaggagatgaccaaaa 29687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 38554016 - 38553978
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  38554016 gaagacttatgagaccaaattgagacactttatagttag 38553978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 47667301 - 47667227
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||||||||| | | ||||| | | ||||| ||  ||||||||||||||||||||||||||||||||| |||||    
T  47667301 aaaaactaacgcagaggaccatattagtaaacggaggaagacttatgagaccaaattgagacactttatagttag 47667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 17494308 - 17494171
Alignment:
Q  110 ttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagac 209  Q
    ||||| |||| |||||||||  || | ||| |||| |||||  |||| |||||| |||||||| ||||||| || ||||| || ||||| |||| |||||    
T  17494308 ttaataaggtctatggtggactacttttaacgttgtttcacgttagacatttaaggttaaaaagtaacggagataaccaatatagtaaacggcataagac 17494209  T
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
     || ||||||||||| | |||||| || |||| |||||    
T  17494208 ataagagaccaaattaaaacacttaatagttaagggac 17494171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 15446663 - 15446731
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||||||| | ||||||||| ||||| || |||| | ||||| ||||||||||| |||||||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacactttat 15446731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 33376341 - 33376273
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||| ||||||| | ||| ||||| ||||| | ||||||| ||||| |||||||||||||||||||||    
T  33376341 aaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacactttat 33376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 37559117 - 37559042
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| ||||| ||   |||  ||||| ||||||||||||||| ||||| ||||||||||    
T  37559117 actaacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggac 37559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 40143741 - 40143698
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  40143741 gaagagttatgagagcaaattgagacactttatagttaggggac 40143698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 44128331 - 44128406
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| ||||| |||| |||| |||   ||| ||||||||||||||||| ||||||||||    
T  44128331 actaacggagaggaccaaaatagtaaacggcataagatttaaaggactaaattgagacactttatagttaggggac 44128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 53400308 - 53400229
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||||||| | ||| ||||||||||| | || |||| ||||  ||||||||||||||||||||| |||| |||||    
T  53400308 aaaatctaacggagaggactaaaatggtaaacgacataagatttataggaccaaattgagacactttatagttatgggac 53400229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 55952932 - 55952869
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||  |||| | || |||| ||||||||||||||||| ||||||||| ||||||||||    
T  55952932 gaccaaaataataaacgacataagagttatgagaccaaattgaaacactttatagttaggggac 55952869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 37560329 - 37560371
Alignment:
Q  205 aagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||    
T  37560329 aagatttatgggaccaaattgagacactttatagttaggggac 37560371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 47668575 - 47668669
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||| ||||||||||||||| || | ||||||||   |||| |||||| ||  || | |||||| |||||||||||||| ||||||||||    
T  47668575 tagatatttgatgttaaaaactaacagagaggaccaaaacaataaacggcagatgatataagggaccaatttgagacactttatagttaggggac 47668669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 50531753 - 50531827
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| |||||||| ||||| ||||| | || |||| ||||| |||||||||||||||||| || |||| ||||    
T  50531753 actaacagaaatgactaaaatagtaaacgacaaaagagttatgggaccaaattgagacacttaatagttaaggga 50531827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 41349487 - 41349583
Alignment:
Q  137 taaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||||||  |||||| |||| ||||||  |||||||||||| |||| ||||| | | ||||||||  ||||| ||||| || |||||||| ||||||    
T  41349487 taaagttagttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaatggaggaagatttatgggatcaaattgacacactt 41349583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 48206283 - 48206215
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||||| ||||||||||||| ||||| || |||| | ||||  || |||||||| |||||||||    
T  48206283 aaaaactaacgtaaatgaccaaaatagtaaacggtagaaaagttataggatcaaattgaaacactttat 48206215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 3e-52; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 51400506 - 51400262
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccc-tccatgatttaatagtctccatttataaaaaagatcgaaaggttaaa 99  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||  ||  ||||||||||| || ||||||| ||  ||||||    
T  51400506 atggaggaaaaaattaggtgtttgtggtttattgtaagttacaatagaccccctccatgatccaacggtctccatttaaaacaaagatcaaacagttaaa 51400407  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||| | || ||||||| |||||||| ||||| ||||||||||  ||| |||||||||||||||| |||||||| ||||||||||||| |     
T  51400406 aataaaagatttagtaagatttatggaggatcaccaataaaattgattcacctaagacatttaatgttaaaaacaaacggaaaggaccaaaatggtatac 51400307  T
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    ||| ||| | ||||| ||| ||||||||||||||||| |||||||    
T  51400306 ggctgaaaatttatgggactaaattgagacactttatagttaggg 51400262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 12062216 - 12062456
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttata-aaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||||||||||| |||||||  ||   |||||| |||| ||||  ||  ||||||||||  | ||||| ||| || ||||||||||  ||    
T  12062216 aaaaaattaggtgtttgtggttcattataacctacagtagatctctccttgatccaacggtctccatttgaagaaaaaaatcaaatggttaaaaatacaa 12062315  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
    |||||||| |||| |||||||||||||||||||||||| |||||| |||| |||||| |||||||||||| ||||||||||||||| |||||  ||| ||    
T  12062316 gatttaataaggtatatggtggatcacctataaagttggttcaccttagacatttaaggttaaaaactaatggaaatgaccaaaatagtaaacagcaaaa 12062415  T
Q  207 gacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || | ||| |||||||||||||||||| || |||| |||||    
T  12062416 gagtaatgggaccaaattgagacacttaatagttaagggac 12062456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 35174215 - 35174454
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||||||||||||||||||||  ||  |||||||||||||||||  ||  ||||||||||| || ||||||| ||  ||||||||| |||    
T  35174215 gaaaaaattaggtgtttgtggtttattataaactacaatagatccctccatgatccaagggtctccatttaaaacaaagatcaaaccgttaaaaat-aaa 35174313  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
     ||||||| |||| | | |||||  ||||||||||||| |||||| ||||  ||||| |||||||| |||| |||||||||||||| ||||| |  ||||    
T  35174314 aatttaataaggtctctcgtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacgatagaa 35174413  T
Q  207 gacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || ||||| |||||  |||| |||||| || |||| |||||    
T  35174414 gagttatgggaccattttgaaacacttaatagttaagggac 35174454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 23560111 - 23559877
Alignment:
Q  1 atggagga-aaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaa-gatcgaaaggttaa 98  Q
    |||||||| ||||||||||||||||||||| |||||||| ||  ||| ||| || | ||||  ||  ||||||||||| |||||| |||| ||   ||||    
T  23560111 atggaggagaaaaattaggtgtttgtggttcattataagctacaatatatctcttcttgatccaacggtctccatttaaaaaaaaagatcaaacaattaa 23560012  T
Q  99 aaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaa 198  Q
    |||| ||||||||||| || | ||||||||| |||||||||||||| |||| | |||| | |||| |||||||||||||||| | ||||||||| |||||    
T  23560011 aaataaaagatttaataagatctatggtggaccacctataaagttggttcatcttagacaattaaggttaaaaactaacggagaggaccaaaatagtaaa 23559912  T
Q  199 tggcagaagacttatgagaccaaattgagacactt 233  Q
     | ||||||| ||||| || |||||||||||||||    
T  23559911 cgacagaagaattatgggatcaaattgagacactt 23559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 11219600 - 11219474
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||| | ||||| ||||  || |||||| ||||  ||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  11219600 tatggtgaaccacctttaaatatggttcaccttagaattttgatgttaaaatctaacggagatgaccaaaatagtaaacggcagaagactcatgagacca 11219501  T
Q  221 aattgagacactttattgttaggggac 247  Q
    |||||||||||||||| ||||||||||    
T  11219500 aattgagacactttatagttaggggac 11219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 49333266 - 49333038
Alignment:
Q  6 ggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaa 105  Q
    ||||||||||||||||||||| || |||||||| ||  |||||  ||| ||||||  ||   ||| |||||| |||||| ||| || |||||||||| ||    
T  49333266 ggaaaaaattaggtgtttgtgcttcattataagctacaatagactccttcatgatccaacgatctacattta-aaaaaaaatcaaacggttaaaaataaa 49333168  T
Q  106 agatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcaga 205  Q
    ||| ||||| |||| ||||||||| |||| |||||||||||||||| ||||  ||||| || |||||||||| || ||| ||| |||||||||   |||     
T  49333167 aga-ttaataaggtctatggtggaccacccataaagttgattcaccttagacgtttaaggtgaaaaactaaccgagatggccagaatggtaaacaacagt 49333069  T
Q  206 agacttatgagaccaaattgagacactttat 236  Q
    ||| |||||||||||| || |||||||||||    
T  49333068 agagttatgagaccaagttaagacactttat 49333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 53808516 - 53808366
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| ||||||| |||||||||||||| ||||| || |  ||||||||| |||| |||| |||||||||||||| ||| |||||||||||    
T  53808516 ggttaaaatttaaaaatttaataaggtttatggtggaccacctttagatatgattcaccttagaaatttgatgttaaaaactaatggagatgaccaaaat 53808417  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
     ||||| | || |||| ||||| ||||| ||||||||||||||| ||||||    
T  53808416 agtaaacgacataagatttatgggaccagattgagacactttatagttagg 53808366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 21128100 - 21127983
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| | |||| |||| |||||  |||||||||  ||||||||||||||||||||||| ||||||||| |||||     
T  21128100 aggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacggaaatgaccaaaatggtaaacggcagaagagttatgg 21128001  T
Q  216 gaccaaattgagacactt 233  Q
    ||||||||||| ||||||    
T  21128000 gaccaaattgacacactt 21127983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 26798737 - 26798978
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaa-gatcgaaaggttaaaaatgaa 105  Q
    |||||||||||||| |||||||| |  ||||| ||  |||||| ||||||||||  || | | | |||||| |||||| |||| ||  ||||||| | ||    
T  26798737 gaaaaaattaggtggttgtggttcaccataagctacaatagattcctccatgatcaaacaattttcatttaaaaaaaacgatcaaacagttaaaattaaa 26798836  T
Q  106 agatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcaga 205  Q
       |||||| | || ||||||||| |||||| ||||||| ||| |  ||   |||||| |||||||||||||||| | ||||||||||||||| ||  ||    
T  26798837 ttttttaataaagtgtatggtggaccacctacaaagttggttcgctttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacggagga 26798936  T
Q  206 agacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||| ||||| ||||||||||||||| ||||| ||||||||||    
T  26798937 agaattatgggaccaaattgagacattttatagttaggggac 26798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 43346365 - 43346518
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| ||||| | |||| ||||||||| ||||||||| |||| | |||| |||| |||||  |||||||||  ||| |||||||||||||    
T  43346365 ggttaaaattaaaaaatttagtaaggtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacgaaaatgaccaaaat 43346464  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    | |||| | ||||||| ||||||||||||||||| |||||| || |||| ||||    
T  43346465 gataaacgacagaagagttatgagaccaaattgacacacttaatagttaaggga 43346518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 49122002 - 49122068
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  49122002 aacggaaaagaccaaaatggtaaacggcagaaaacttatgagaccaaattgagacactttatagtta 49122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 48254830 - 48254949
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||||||||||||| ||||||||| |||| | |||| |||| ||||||||||||||    |||||||  || ||||||||||| ||||||||| |||||     
T  48254830 aggtttatggtggaccacctataatgttggtccaccttagacatttaatgttaaaattagacggaaaaaactaaaatggtaaacggcagaagagttatgt 48254929  T
Q  216 gaccaaattgagacactttat 236  Q
    ||||||| |||||||||||||    
T  48254930 gaccaaa-tgagacactttat 48254949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 32980445 - 32980524
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| ||||  ||||||||||||||||||| | ||||||||||    
T  32980445 aaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttgtagttaggggac 32980524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 8371358 - 8371264
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||| |||||||||||||||||| | ||||||||| |||||  |||||||| |||||  |||||||||||||| ||||| ||||||||||    
T  8371358 tagatatttgatgttaaaaactaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggac 8371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 48867267 - 48867502
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    ||||||||||||| ||||||||||||||||| ||  ||||| |||||||||||| || | ||| |||||    || ||||  || |||||||| |  ||     
T  48867267 aaaaaattaggtggttgtggtttattataagctacaatagacccctccatgattcaacaatcttcattt----aatagataaaatggttaaaattacaaa 48867362  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
     |||||| | || |||||| || |||||| ||||||| |||||| |||| |||||| ||||||||||||| |||| ||||| | | ||||| |    |||    
T  48867363 ttttaataaagtctatggtagaccacctacaaagttggttcaccttagacatttaaggttaaaaactaacagaaaggaccacattagtaaacgtagaaag 48867462  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||| ||| ||||||||||| |||||| || |||| |||||    
T  48867463 actaatgggaccaaattgacacacttaatagttaagggac 48867502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 19622138 - 19622049
Alignment:
Q  158 atttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| ||||| |||||||||||| | |||||||   |||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  19622138 atttgatgttgaaaactaacggagaggaccaaaccagtaaatagcagaagatttatgagactaaattgagacactttatagttaggggac 19622049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 17350048 - 17350173
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaa-tggtaaatggcagaagacttatgagacc 219  Q
    ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||||||||  |||||  || ||||||| || | ||||    
T  17350048 tatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaagaggtaacagg-agaagacataagggacc 17350146  T
Q  220 aaattgagacactttattgttagggga 246  Q
    ||||||||||||||||| |||||||||    
T  17350147 aaattgagacactttatagttagggga 17350173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 25583252 - 25583158
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||||| |||||||| |||| || | ||||||||| ||||| ||||||||||||||| ||||||||||||||  || || ||||||||||    
T  25583252 tagacatttaaggttaaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggac 25583158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 48253056 - 48252977
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| ||||| | | | ||||| ||  ||||||||||| ||||||||||||||||||||| ||||||||||    
T  48253056 aaaaactaacggagatgactacattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggac 48252977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 51825618 - 51825693
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||| ||||| | ||||||| ||||| ||||||||||| ||||||||| |||| |||||    
T  51825618 actaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggac 51825693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 39133187 - 39133061
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||| ||||  || |||||| |||| |||| ||||||||||||||| || | ||||||||  |  || |  ||||||| || | |||||    
T  39133187 tatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagaggaccaaaagaggtaacgagagaagacataagggacca 39133088  T
Q  221 aattgagacactttattgttaggggac 247  Q
    |||||||||||||||| ||||||||||    
T  39133087 aattgagacactttatagttaggggac 39133061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 54653964 - 54654038
Alignment:
Q  173 ctaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| | ||||||||| ||||| | ||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  54653964 ctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggac 54654038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 25585826 - 25585887
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagac 229  Q
    ||||||||||||| ||||| ||||| ||||| | ||||||| ||||||||||||||||||||    
T  25585826 aaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagac 25585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 47855331 - 47855404
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||| ||||||| | ||||||||| ||||| ||||||||| ||||  ||||||||||||||||||||| ||||    
T  47855331 aaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagtta 47855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 32979220 - 32979132
Alignment:
Q  159 tttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||||||||||| | ||||||||  |  ||| |||||| | ||||| || |||||||||||||||||| ||||| ||||    
T  32979220 tttaatgttaaaaactaacggagaggaccaaaagaggtaattgcagaaaatttatgggatcaaattgagacactttatagttagaggac 32979132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 51401371 - 51401423
Alignment:
Q  195 taaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggac 51401423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 11220667 - 11220730
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||| | ||||||| ||||  ||||||||||||||||||||| ||||||||||    
T  11220667 gaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagttaggggac 11220730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 47808105 - 47808172
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||| | ||||||||| | ||| | ||||||| ||||||||||||||||||||||||||| ||||    
T  47808105 taacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagtta 47808172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 51824245 - 51824182
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    ||||||| | ||||| |||||||||||||| |||||| |||||| | |||||||||||||||||    
T  51824245 actaacgcagatgacaaaaatggtaaatggtagaagatttatgaaatcaaattgagacacttta 51824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 29536837 - 29536763
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    |||| |||||||| | ||||||||| ||||| |  |||||| ||||| ||||||||||||||||||||| |||||    
T  29536837 aaaagctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagttag 29536763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 32974213 - 32974295
Alignment:
Q  165 gttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||  ||||||| ||||||||||  |  || |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  32974213 gttaaaatgtaacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggac 32974295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 43103293 - 43103367
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||| ||||||||| ||||| ||||||| | |||||| |||||||||||| | ||| | |||||||||    
T  43103293 actaacggaaaggaccaaaatagtaaacggcagaaaatttatgaaaccaaattgagatattttgtagttagggga 43103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 2124148 - 2124076
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    ||||||||| ||||||||||| ||||| |||| |||| ||||| ||||||||| ||| | ||||| |||||||    
T  2124148 actaacggagatgaccaaaatagtaaacggcataagatttatgggaccaaattaagatattttatagttaggg 2124076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 19253002 - 19253074
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| | ||||||||||||||| ||||||| | ||||| || |||||||||||| |||||  |||||||||    
T  19253002 aacggacaggaccaaaatggtaaacggcagaatatttatgggatcaaattgagacattttataattaggggac 19253074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 47766980 - 47767020
Alignment:
Q  204 gaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  47766980 gaagacttatgggaccaaattgagacactttatagttaggg 47767020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 8372609 - 8372688
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||  |||||||||| |||||  |  |  || ||||| ||||||||||||||||||||| ||||||||||    
T  8372609 aaaaactaacggaggtgaccaaaatagtaaactgttgtggatttatgggaccaaattgagacactttatagttaggggac 8372688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 32973230 - 32973183
Alignment:
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  32973230 ggcagaagacataagggaccaaattgagacactttatagttaggggac 32973183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 42632825 - 42632750
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||| ||||| ||||| | || |||| ||||| || |||||||||||||||||| ||||||||||    
T  42632825 actaacggagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagttaggggac 42632750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 43345442 - 43345363
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| |  |||||||||||||| |  |||||| ||||| ||||||||||| ||| ||||| |||| |||||    
T  43345442 aaaaactaacggagaaaaccaaaatggtaaacgagagaagatttatgggaccaaattgaaacattttatagttaagggac 43345363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 47765649 - 47765538
Alignment:
Q  80 aaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgg 179  Q
    ||||| ||| ||||||||||| | ||| ||| ||| |||| ||||||||| || || |||   || ||||||  ||| |||| |||||||||||||||||    
T  47765649 aaaaaaatcaaaaggttaaaatttaaaaattcaataaggtctatggtggaccatctttaacaatggttcacctaagatatttgatgttaaaaactaacgg 47765550  T
Q  180 aaatgaccaaaa 191  Q
    | ||||||||||    
T  47765549 agatgaccaaaa 47765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 7483496 - 7483541
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaa 191  Q
    |||||| |||| |||| |||||||||||||||||| ||||||||||    
T  7483496 ttcaccttagatatttgatgttaaaaactaacggagatgaccaaaa 7483541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 10987688 - 10987725
Alignment:
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  10987688 ttatgggaccaaattgagacactttatagttaggggac 10987725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 41386247 - 41386174
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | ||||||||| ||||| | |  |||| |||||  |||||||||||||||||||| ||||||||||    
T  41386247 taacggagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagttaggggac 41386174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 43102010 - 43101949
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    |||||| |||| |||||| ||||  | ||||||| ||||| |||||||||||||||||||||    
T  43102010 aacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttat 43101949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 53047986 - 53047941
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||    
T  53047986 cagaagacataagggaccaaattgagacactttatagttaggggac 53047941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 53049064 - 53049109
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||    
T  53049064 cagaagacataagggaccaaattgagacactttatagttaggggac 53049109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 29537135 - 29537191
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaatt 224  Q
    ||||||||||||| | ||||||||| ||||| ||||||||| ||||| ||| |||||    
T  29537135 aaaaactaacggagaggaccaaaattgtaaacggcagaagatttatgggacgaaatt 29537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 5e-51; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 13366877 - 13367122
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||||||||||||||||||| |||| ||| ||  ||||||| || | ||||  || |||||||| ||| |||||| ||| || ||||||||    
T  13366877 atggaggaaaaaattaggtgtttgtggttcattacaagctacaatagatctctacttgatccaacagtctccaatta-aaaaaatatcaaacggttaaaa 13366975  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    || |||| |||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||||||||||||| | ||||||||| ||||| |    
T  13366976 ataaaaggtttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggagaggaccaaaatagtaaacg 13367075  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| ||||| ||||||||| | ||||||||| |||| |||||    
T  13367076 gcagaagatttatgggaccaaattaaaacactttatagttaagggac 13367122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 37324515 - 37324760
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||||| |||||||||||||  ||||||| ||  |||||||||||||||||| |||  |||||||||| |||||||||| || || ||| |    
T  37324515 atggaggaaaaaattcggtgtttgtggttcgttataagctacaatagatccctccatgattcaatgatctccattta-aaaaaagatcaaacggctaaga 37324613  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    || ||||||||||| || ||||||||||| |||||||||||||| |||||| |||| |||||| || ||||| ||||||| |  | |||||| |||||||    
T  37324614 ataaaagatttaataagatttatggtggaccacctataaagttggttcaccttagacatttaaagtgaaaaattaacggagagaaacaaaatagtaaatg 37324713  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |  ||||| || |||||||||||||||||| ||||| ||||||||||    
T  37324714 gtcgaagatttttgagaccaaattgagacattttatagttaggggac 37324760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 19913781 - 19913536
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||||  ||  ||||||||||| |||||| ||| || ||||||||    
T  19913781 atggaggaaaaaatttggtgtttgtggttcattataagctacgatagatccctccttgatccaacggtctccattta-aaaaaatatcaaatggttaaaa 19913683  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    |     |||||||| | || ||||||||| || ||||||||||| |||||| |||| |||||| |||||||||||||||| | |||||||||| ||||      
T  19913682 acatgtgatttaataaagtctatggtggaccatctataaagttggttcaccttagaaatttaaggttaaaaactaacggagaggaccaaaatgataaacc 19913583  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||| ||||||||||| ||||||||| ||||| ||||    
T  19913582 gcagaagacttatgggaccaaattgaaacactttatagttagaggac 19913536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 44606429 - 44606183
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||| |||||||| |||||||||||||| ||||| || ||  ||||||| || |||||| ||| | | |||||||| |||||||||| || ||||||||    
T  44606429 atggatgaaaaaatcaggtgtttgtggttcattattaggtaaaatagatctcttcatgatctaacaatatccatttaaaaaaaagatcaaacggttaaaa 44606330  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatg 200  Q
    || ||||||||||  |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||||||||| ||| | || ||||||  ||||      
T  44606329 ataaaagatttaacaaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaatggagaggatcaaaataataaaca 44606230  T
Q  201 gcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    | |||||| ||||| ||||||||||| ||||| ||| ||||||||||    
T  44606229 gaagaagatttatgggaccaaattgaaacactatatagttaggggac 44606183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 8095638 - 8095390
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccattt--ataaaaaagatcgaaaggttaa 98  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||| |||  ||||  ||  ||||||||||  | |||||| ||| || ||||||    
T  8095638 atggaggaaaaaattaggtgtttgtggtttattataacctacaatagatctctctttgatccaacggtctccatttgaagaaaaaaaatcaaatggttaa 8095539  T
Q  99 aaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaa 198  Q
    | ||  |||||||||| |||| ||||||| |||||||||||||||| |||||| |||| ||||||  ||||||||||||||||| ||||||||| |||||    
T  8095538 agatacaagatttaataaggtatatggtgcatcacctataaagttggttcaccttagacatttaagattaaaaactaacggaaaggaccaaaatagtaaa 8095439  T
Q  199 tggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     | || |||| | ||| |||||||||||||||||| || |||| |||||    
T  8095438 cgacaaaagagtaatgggaccaaattgagacacttaatagttaagggac 8095390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 35944191 - 35943969
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    |||||||||| |||| | |||| |||||||||||  ||||| |||| ||||||  ||   | |||||||| || ||||||| ||  ||||||||| ||||    
T  35944191 aaaaaattagttgttagcggttcattataagttacaatagaccccttcatgatccaacgatttccatttaaaataaagatcaaacagttaaaaataaaag 35944092  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| || | |||||||||||||||||||||||| |||||| |||| |||||| |||||||||||||||| ||||||||||| |||||  ||| |||    
T  35944091 atttaataagatctatggtggatcacctataaagttggttcaccttagacatttaaagttaaaaactaacggagatgaccaaaatagtaaactgcataag 35943992  T
Q  208 acttatgagaccaaattgagaca 230  Q
    | ||||| |||||||||||||||    
T  35943991 atttatgggaccaaattgagaca 35943969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2421118 - 2421351
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttata-aaaaagatcgaaaggttaaa 99  Q
    ||||||||||||||||||||||||||||| |||||||  ||  ||||||| |||  ||||  ||| ||||||||||| | ||||||||| || |||||||    
T  2421118 atggaggaaaaaattaggtgtttgtggttcattataaactacaatagatctctcattgatccaatggtctccatttaaagaaaaagatcaaacggttaaa 2421217  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||||| |||| |||| |||| || ||||||||||| |||||| |||| |||||| |||||||||||||  | | |||||||||  ||||     
T  2421218 aataaaagatttaataaggtctatgatggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacaaagaggaccaaaataataaac 2421317  T
Q  200 ggcagaagacttatgagaccaaattgagacactt 233  Q
    ||||||||| || || ||||||||||| ||||||    
T  2421318 ggcagaagatttctgggaccaaattgaaacactt 2421351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 36070472 - 36070222
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagat---cgaaaggtta 97  Q
    ||||||||||||||||||||||||||||| |||||||| ||  |||||| ||||||| ||||||  ||||| ||||| |||||| |    ||||   | |    
T  36070472 atggaggaaaaaattaggtgtttgtggttcattataagctacaatagattcctccataatttaacggtctctatttaaaaaaaaaaaaaccgaacaataa 36070373  T
Q  98 aaaa-tgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggta 196  Q
    |||| | ||| ||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| || ||| ||||||||  | ||||||||| |||    
T  36070372 aaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaagactaacggggaggaccaaaatagta 36070273  T
Q  197 aatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    || ||||||||| ||||| || |||||||||||||||||| ||||||||||    
T  36070272 aacggcagaagatttatgggatcaaattgagacactttatagttaggggac 36070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 233
Target Start/End: Complemental strand, 20308829 - 20308663
Alignment:
Q  67 gtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgt 166  Q
    ||||||||||| |||||||||| ||   |||||||| ||||||||||| |||| ||||| |||  | ||||||||||| |||||| |||| |||||| ||    
T  20308829 gtctccatttaaaaaaaagatcaaaccattaaaaataaaagatttaataaggtctatggcggactatctataaagttggttcaccttagacatttaaggt 20308730  T
Q  167 taaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||||| ||| ||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  20308729 taaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacactt 20308663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 67 - 233
Target Start/End: Complemental strand, 21095462 - 21095296
Alignment:
Q  67 gtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgt 166  Q
    ||||||||||| |||||||||| ||   |||||||| ||||||||||| |||| ||||| |||  | ||||||||||| |||||| |||| |||||| ||    
T  21095462 gtctccatttaaaaaaaagatcaaaccattaaaaataaaagatttaataaggtctatggcggactatctataaagttggttcaccttagacatttaaggt 21095363  T
Q  167 taaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||||| ||| ||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  21095362 taaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacactt 21095296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 24069387 - 24069517
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||||||| |||| | |||| |||| ||||| ||||||||||  ||||||| ||||||||||||||| ||||||||| |||||     
T  24069387 aggtctatggtggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacggaaaggaccaaaatggtaaacggcagaagagttatgg 24069486  T
Q  216 gaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||||||||||| |||| ||||    
T  24069487 gaccaaattgagacactttatagttaaggga 24069517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 39515374 - 39515244
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| |||| |||| ||||||||| |||| | |||| |||| ||||| |||||||||   |||||||||||||||| ||||||||||| |||| ||||||    
T  39515374 aggtctatgatggaccacctataatgttggtccaccttagacatttagtgttaaaaatagacggaaatgaccaaaaaggtaaatggcaaaagagttatga 39515275  T
Q  216 gaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||||||||||| || ||||||    
T  39515274 gaccaaattgagacactttatagtcagggga 39515244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 247
Target Start/End: Complemental strand, 37472621 - 37472447
Alignment:
Q  72 catttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaa 171  Q
    |||||| |||||| ||| || ||||||||||    |||||||| |||| |||| |||| ||| |||||||||| ||||| | ||| |||||| |||||||    
T  37472621 catttaaaaaaaaaatcaaatggttaaaaatatgtgatttaataaggtctatg-tggaccacatataaagttgtttcacaacagacatttaaggttaaaa 37472523  T
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |  || ||||| ||||||||||||||| | || |||||||||| ||||||||||||||||||||| ||||| ||||    
T  37472522 ataaatggaaaggaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagttagaggac 37472447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 93 - 247
Target Start/End: Complemental strand, 36756262 - 36756108
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| ||||||| ||| |||||||| | ||||| ||||  ||||||||| |||| |||| |||||||||||||||||| |||||||||||    
T  36756262 ggttaaaatttaaaaatttaataaggcttatggtgaaccacctttaaatatgattcaccttagaaatttgatgttaaaaactaacggagatgaccaaaat 36756163  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     ||||| | || |||| ||||| ||||| ||||| ||||||||| |||| |||||    
T  36756162 agtaaacgacataagatttatgtgaccagattgaaacactttatagttatgggac 36756108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 7816030 - 7816155
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||| ||| ||||||||| |||| | |||| |||| ||||| ||||||||||  ||| |||||||||||||| |||  ||||||||| ||||||    
T  7816030 aggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaaatgataac-ggcagaagaattatga 7816128  T
Q  216 gaccaaattgagacactttattgttag 242  Q
    ||||||||||||||||||||| |||||    
T  7816129 gaccaaattgagacactttatagttag 7816155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 7796749 - 7796868
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||| ||| ||||||||| |||| | |||| |||| ||||| ||||||||||  ||| |||||||||||||| |||  ||||||||| ||||||    
T  7796749 aggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaaatgataac-ggcagaagagttatga 7796847  T
Q  216 gaccaaattgagacactttat 236  Q
    |||||||||||||||||||||    
T  7796848 gaccaaattgagacactttat 7796868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 247
Target Start/End: Complemental strand, 10052302 - 10052148
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| ||||||| |||||||||||||| ||||| ||||  || |||| | |||| ||||||||||||||||||| ||| ||||||||||     
T  10052302 ggttaaaacttaaaaatttaataaggtttatggtggaccacctttaaatatggttcatcttagacatttaatgttaaaaactaaaggagatgaccaaaag 10052203  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     |  || |||||| ||| || | |||||| ||||||||||||||  |||||||||    
T  10052202 aggtaacggcagatgacataagggaccaatttgagacactttataattaggggac 10052148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 29738422 - 29738341
Alignment:
Q  160 ttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    |||| ||||||||| |||||| | |||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  29738422 ttaaggttaaaaacaaacggagaggaccaaaaaggtaaacggcagaagacttatgagactaaattgagacactttatagtta 29738341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 8395279 - 8395064
Alignment:
Q  7 gaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaa 106  Q
    |||||||||||||| |||||||| |  ||||| || ||||||| ||||||||||  ||   | | |||||| ||||| |||| || |||||||| | ||     
T  8395279 gaaaaaattaggtggttgtggttcaccataagctacgatagattcctccatgatcaaacgattttcatttaaaaaaacgatcaaacggttaaaattaaat 8395180  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
      |||||| | || ||||||||| |||||| ||||||| ||||   ||   |||||| |||||||||||||||| | ||||||||||||||| || ||||    
T  8395179 tttttaataaagtgtatggtggaccacctacaaagttggttcattttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaacggaagaa 8395080  T
Q  207 gacttatgagaccaaa 222  Q
    || ||||| |||||||    
T  8395079 gaattatgggaccaaa 8395064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 7770839 - 7770964
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||| ||| ||||||||| |||| | |||| |||| ||||| ||||||||||  ||| |||||||||||||| | || |||| |||| ||||||    
T  7770839 aggtctatggaggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacgaaaatgaccaaaatgat-aacggcataagagttatga 7770937  T
Q  216 gaccaaattgagacactttattgttag 242  Q
    ||||||||||| ||||||||| |||||    
T  7770938 gaccaaattgaaacactttatagttag 7770964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 29739636 - 29739714
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| |||||| ||||||||||||||||| || |||| | ||||| ||||||||||||||||||||| |||||||||    
T  29739636 aaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttagggga 29739714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 36940026 - 36940104
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||| |||||| |||||||||| ||||||||| |||||||||    
T  36940026 aaaaattaacggagatgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacactttatagttagggga 36940104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 39546660 - 39546746
Alignment:
Q  158 atttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    |||| |||||||||||||||||| |||||||||| |||||| |||| || | ||||| ||||||||||||||||||||  |||||||    
T  39546660 atttgatgttaaaaactaacggagatgaccaaaacggtaaacggcataatatttatgggaccaaattgagacactttaaagttaggg 39546746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 24068453 - 24068374
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||| | ||||| ||  ||||||||||| ||||||||||||||||||||| ||||||||||    
T  24068453 aaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggac 24068374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 37275010 - 37274931
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||||| ||||| ||||||||| ||||| || |||||||||||||||||| ||||| ||||    
T  37275010 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacactttatagttagaggac 37274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 38110 - 38029
Alignment:
Q  166 ttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||||| | ||||| ||| ||||| ||  ||||||||||||||||||||| | ||||||||| ||||||||||    
T  38110 ttaaaaactaacggagaggaccacaatagtaaacggaggaagacttatgagaccaaattcaaacactttatagttaggggac 38029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 7486287 - 7486122
Alignment:
Q  81 aaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgga 180  Q
    |||| ||| ||||| ||||| | ||| ||||||| |||| |||||||||  || | ||||  || |||||  |||| |||| ||||||||||||||||||    
T  7486287 aaaaaatcaaaaggctaaaatttaaaaatttaataaggtctatggtggacaacatttaaacatggttcactttagacatttgatgttaaaaactaacgga 7486188  T
Q  181 aatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
     | ||||||||| |||||  ||| |||| ||||| |||||||||||  |||||||| |||| ||||    
T  7486187 gaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagttaaggga 7486122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 117223 - 117092
Alignment:
Q  116 aggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatga 215  Q
    |||| ||||||||| ||||| ||||  ||| ||||| |||| |||| |||||||||||||||||| | ||||||||   |||| | ||||||| |||||     
T  117223 aggtctatggtggaccacctttaaacatgactcaccttagacatttgatgttaaaaactaacggagaggaccaaaacaataaacgacagaagatttatgg 117124  T
Q  216 gaccaaattgagacactttattgttaggggac 247  Q
    || |||||||| ||| |||||  |||||||||    
T  117123 gatcaaattgaaacattttataattaggggac 117092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 3237536 - 3237461
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||| |||||| ||||| ||||||| | ||||| ||||||||||||||| ||||  ||||||||||    
T  3237536 actaacggaaatgatcaaaattgtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaggggac 3237461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 38591016 - 38591079
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||||    
T  38591016 gaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggggac 38591079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 40250257 - 40250144
Alignment:
Q  78 taaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaac 177  Q
    ||||||||||| || |||||||| | |||  |||||| |||| ||||||||| ||| ||||| ||||||||| | |||| |||||  |||||||||||||    
T  40250257 taaaaaagatcaaagggttaaaattaaaat-tttaataaggtatatggtggaccacatataatgttgattcatcttagatatttagggttaaaaactaac 40250159  T
Q  178 ggaaatgaccaaaat 192  Q
    ||||| ||| |||||    
T  40250158 ggaaaggactaaaat 40250144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 19914901 - 19914978
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||||| ||||||||||||||||| || |||||| ||||| |  |||||||||||||||||| |||| |||||    
T  19914901 aaacaaacggatatgaccaaaatggtaaacggtagaagatttatgggtacaaattgagacactttatagttaagggac 19914978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 31625383 - 31625456
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | ||||||||| ||||| |||| |||| ||||| |||||||||||||||||||||  |||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttataattaggggac 31625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 37276161 - 37276314
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| |||||||  ||| ||| ||| | ||||| ||||  || |||||| ||||  ||| ||||||||||||||| || | |||||| ||    
T  37276161 ggttaaaattaaaaaatttaatatggtctatagtgaaccacctttaaatatggttcaccttagacttttgatgttaaaaactaacagagaggaccaatat 37276260  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
      |||| |||| |||| ||||| ||||||||||||||||||||| |||| ||||    
T  37276261 aataaacggcaaaagatttatgggaccaaattgagacactttatagttaaggga 37276314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 44103242 - 44103367
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | ||||||||  | ||| || ||||||| || |||||||    
T  44103242 tatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggaccaaaagaggaaacggaagaagacataagagacca 44103341  T
Q  221 aattgagacactttattgttagggga 246  Q
    | |||||||  ||| | |||||||||    
T  44103342 atttgagacgttttttagttagggga 44103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 34617113 - 34617253
Alignment:
Q  93 ggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaat 192  Q
    |||||||| | ||| ||||| | |||| || |||||| ||||| ||| |||| | |||| || | |||||  |||||||||| |||||||||||||||||    
T  34617113 ggttaaaattaaaaaatttagtaaggtctacggtggaccacctgtaatgttggtccaccttatacatttagggttaaaaactgacggaaatgaccaaaat 34617212  T
Q  193 ggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    | |||| || ||||||  |||| ||| ||||||| ||||||    
T  34617213 gataaacggaagaagagctatgggactaaattgacacactt 34617253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 31871612 - 31871462
Alignment:
Q  67 gtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgt 166  Q
    ||||||||||| |||||||||| || |||||||||| |||||||| || ||||||||| |||| |       | |||| | |||| ||||  ||||| ||    
T  31871612 gtctccatttaaaaaaaagatcaaacggttaaaaataaaagattttataaggtttatgatggacc-------atgttggtccaccttagacgtttaaggt 31871520  T
Q  167 taaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaatt 224  Q
    ||||||||||| |||| |||||||||  |||| | ||||||| | ||| |||||||||    
T  31871519 taaaaactaacagaaaggaccaaaataataaacgacagaagattcatgggaccaaatt 31871462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 43277922 - 43277993
Alignment:
Q  176 acggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||| ||||| |||| |||| ||| | ||||||||||||||| ||||| ||||||||||    
T  43277922 acggacatgaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttaggggac 43277993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 34616257 - 34616179
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggc-----agaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||||||||||||||||||||||||||| | |     | |||| ||||| ||||||||||||||||||||| ||||    
T  34616257 aaaaactaacggaaatgaccaaaatggtaaacgacaaaagaaaagatttatgggaccaaattgagacactttatagtta 34616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 1570203 - 1570272
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||||| ||||||||||| ||||| |||| || | |||  |||||||||||||||||||||| ||||    
T  1570203 actaacggagatgaccaaaatagtaaacggcataaaatttaatagaccaaattgagacactttatagtta 1570272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 36938819 - 36938750
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaa 222  Q
    |||| |||| |||||||||| |||| || | ||||||||| ||||| ||||||||| |||||||||||||    
T  36938819 tagatatttgatgttaaaaattaacagagaagaccaaaatagtaaacggcagaagatttatgagaccaaa 36938750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 39220824 - 39220737
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||||| |||| |||||| ||||||||||||| || || || ||||| ||||| ||||||||||||| |  | |||||||| ||||||    
T  39220824 ttcaccttagacatttaaggttaaaaactaacagagataacgaaaatagtaaacggcagaagacttaaggaatcaaattgaaacactt 39220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 41522671 - 41522746
Alignment:
Q  158 atttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||| |||||||||| | ||||||| ||| ||||  ||||| ||||||||||||||  ||||||||||| ||||||    
T  41522671 atttgatgttaaaaattgacggaaaggactaaaacagtaaacggcagaagacttataggaccaaattgacacactt 41522746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 41867013 - 41866939
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||||| || ||||||||||| |||||||||  || | ||||| ||||||||||| ||||||||| |||| ||||    
T  41867013 actaacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacactttatagttaaggga 41866939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29738561 - 29738524
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataag 38  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29738561 atggaggaaaaaattaggtgtttgtgattcattataag 29738524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 41867951 - 41867988
Alignment:
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  41867951 ttatgggaccaaattgagacactttatagttaggggac 41867988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 244
Target Start/End: Original strand, 6844614 - 6844642
Alignment:
Q  216 gaccaaattgagacactttattgttaggg 244  Q
    |||||||||||||||||||||||||||||    
T  6844614 gaccaaattgagacactttattgttaggg 6844642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 32553804 - 32553864
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacc 134  Q
    ||||||||||| |||||| |||||||  | ||||| ||||| |||||||||||||| ||||    
T  32553804 tttataaaaaaaatcgaacggttaaatttaaaagaattaataaggtttatggtggaccacc 32553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 35799670 - 35799610
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacc 134  Q
    ||||||||||| |||||| |||||||  | ||||| ||||| |||||||||||||| ||||    
T  35799670 tttataaaaaaaatcgaacggttaaatttaaaagaattaataaggtttatggtggaccacc 35799610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 43275857 - 43275797
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    |||||||||  |||| |||| |||| ||||| ||| ||||||||||||||||| |||||||    
T  43275857 gaccaaaataataaacggcataagagttatgggactaaattgagacactttatagttaggg 43275797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 43386730 - 43386774
Alignment:
Q  203 agaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  43386730 agaagagttatgggaccaaattgagacattttatagttaggggac 43386774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 31738654 - 31738407
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccattt-ataaaaaagatcgaaaggttaaa 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||  ||||||| |||||||||  ||  |||||||||| | |||||| ||| || |||||||    
T  31738654 atggaggaaaaaattaggtgtttgtggttcattataagctacaatagatctctccatgatccaacggtctccattttaaaaaaaatatcaaatggttaaa 31738555  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    |||    |||||||| |  | ||||||||| |  ||||||||||| |||||  |||| |||||| |||||||||||||||| | |||||||||||||||     
T  31738554 aatttgtgatttaataaaatctatggtggaccgtctataaagttggttcacattagacatttaaggttaaaaactaacggagaggaccaaaatggtaaac 31738455  T
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     |||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  31738454 cgcagaagacttatgggaccaaattgaaacactttatagttaggggac 31738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 293474 - 293701
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    |||||| ||||||||||||||| |||||||| ||  ||||||| |||||||||  ||   |||||||||| |||||||||| || ||||||||||         
T  293474 aaaaaaataggtgtttgtggttcattataagctacaatagatctctccatgatccaacgatctccattta-aaaaaagatcaaatggttaaaaatatgtt 293572  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| ||||||||  |||||| | ||||||||||||||| | ||||||    
T  293573 atttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaataaacggagaggaccaaaatggtaaacgacagaag 293672  T
Q  208 acttatgagaccaaattgagacactttat 236  Q
    ||||||||||||||||||| |||||||||    
T  293673 acttatgagaccaaattgaaacactttat 293701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 14328704 - 14328845
Alignment:
Q  105 aagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcag 204  Q
    |||||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||||| ||||||| | ||||||||| ||||| | ||     
T  14328704 aagatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaa 14328803  T
Q  205 aagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||| ||||||||||||||| |||||||| || |||| ||||    
T  14328804 aagaattatgagaccaaattaagacacttaatagttaaggga 14328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 14421714 - 14421855
Alignment:
Q  105 aagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcag 204  Q
    |||||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||||| ||||||| | ||||||||| ||||| | ||     
T  14421714 aagatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacgacaa 14421813  T
Q  205 aagacttatgagaccaaattgagacactttattgttagggga 246  Q
    |||| ||||||||||||||| |||||||| || |||| ||||    
T  14421814 aagaattatgagaccaaattaagacacttaatagttaaggga 14421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 235
Target Start/End: Original strand, 27440079 - 27440235
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacg 178  Q
    |||||||||| || |||||||| | ||| ||||||| | ||||||||| || |||||| |||||| ||||||| |||| |||||| |||||||| |||||    
T  27440079 aaaaaagatcaaacggttaaaattaaaaaatttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacg 27440178  T
Q  179 gaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    || | ||||||||| ||||| || |||||| ||||| ||||||||||||||| ||||    
T  27440179 gagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaattta 27440235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 22299896 - 22299975
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  22299896 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggac 22299975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 9927765 - 9927650
Alignment:
Q  131 cacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagaca 230  Q
    |||||| ||||||| |||| | |||| |||||| |||||||| ||||||| ||||||||||| ||||| |   ||||  ||||| |||||||||||||||    
T  9927765 cacctacaaagttggttcatcttagacatttaaggttaaaaattaacggagatgaccaaaatagtaaacgattgaag-tttatgggaccaaattgagaca 9927667  T
Q  231 ctttattgttaggggac 247  Q
    |||||| ||||||||||    
T  9927666 ctttatagttaggggac 9927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 18139402 - 18139554
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | ||| ||||||| | || |||||||||||| || ||||  || |||||| |||| |||| |||||||||||||| ||| | ||||||    
T  18139402 aaaggttaaaatttaaaaatttaataatgtctatggtggatcatctttaaacatggttcaccttagacatttgatgttaaaaactaatggagaggaccaa 18139501  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||   |||| |||||||||  || | |||||| |||||||||||||| |||||    
T  18139502 aacaataaacggcagaagatataagggaccaatttgagacactttatagttag 18139554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 8412313 - 8412388
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| ||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||||    
T  8412313 actaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggac 8412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 31740265 - 31740344
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| |||||| | ||||||||||||||| |||| |||| ||||| ||||||||||||||||||||| |||| |||||    
T  31740265 aaaaacaaacggataggaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagttaagggac 31740344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 22298786 - 22298660
Alignment:
Q  109 tttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaaga 208  Q
    |||||| | ||||||||| || ||||| |||||||  | |||| |||| |||||| |||||||||||||||||  |||||||||  |||| ||||||| |    
T  22298786 tttaataaagtttatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaacggcagaata 22298687  T
Q  209 cttatgagaccaaattgagacacttta 235  Q
     ||||| || |||| ||||||||||||    
T  22298686 gttatgggatcaaactgagacacttta 22298660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 8411203 - 8411130
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| | ||||||||| ||||| |||| |||| |||| |||||||||||||||||||||| ||||||||||    
T  8411203 taacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagttaggggac 8411130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 33801995 - 33802089
Alignment:
Q  153 tagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||| |||| |||||||||||||||||| | |||||| | ||||||   ||||||| ||||| || |||||| ||||||||||| ||||||||||    
T  33801995 tagatatttgatgttaaaaactaacggagaggaccaatacggtaaactacagaagatttatgggatcaaattaagacactttatagttaggggac 33802089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 16268824 - 16268655
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    ||||||||||||| |||||||| |||||||| ||  |||||||||||||||||  || | ||| |||| | | |||| ||| || || ||||| | |||     
T  16268824 aaaaaattaggtggttgtggttcattataagctaaaatagatccctccatgatccaacaatcttcattcaaagaaaaaatcaaacggataaaattaaaaa 16268725  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaac 177  Q
    ||||||| | || |||||| || ||| || ||||||| |||||  |||| |||||| ||||| |||||||    
T  16268724 atttaataaagtctatggtagaccacatacaaagttggttcacgttagacatttaaggttaataactaac 16268655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 34084148 - 34084195
Alignment:
Q  189 aaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||||    
T  34084148 aaatggtaaacgacagaagatttatgagaccaaattgagacactttat 34084195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 27438913 - 27438840
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||| ||||||| ||||||||||  ||||| ||||||| | ||||| || |||||||||||||||||| ||||    
T  27438913 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagtta 27438840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 5311386 - 5311323
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||| | || |||| ||||  ||||||||||||||||||||| ||||||||||    
T  5311386 gaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggac 5311323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 33807812 - 33807733
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||| | |||||||| |||||| ||||||| | |||||  | |||||||||||||||||| |||| |||||    
T  33807812 aaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagttaagggac 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 2130970 - 2130877
Alignment:
Q  103 gaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaa 197  Q
    |||||||||| |||| | ||||||| | ||||||||||| || |||||| |||| |||||| |||||| ||||| ||| | ||||||||| ||||    
T  2130970 gaaagattta-tgagatctatggtgaaccacctataaaggtggttcaccttagatatttaaggttaaatactaagggagaggaccaaaatagtaa 2130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 13173114 - 13173081
Alignment:
Q  214 gagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||||||||||||| ||||||||||    
T  13173114 gagaccaaattgagacactttatagttaggggac 13173081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 19368545 - 19368590
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || ||||||||||||||||||||||| ||||| ||||    
T  19368545 cagaagacataagagaccaaattgagacactttatagttagaggac 19368590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 13930506 - 13930747
Alignment:
Q  6 ggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaa 105  Q
    |||||||||||||||||||||||| | |||||| ||  ||||| |||||||||||  ||  || | |||||  | ||| |||| || ||||||||||  |    
T  13930506 ggaaaaaattaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcattttaagaaatgatcaaacggttaaaaatata 13930605  T
Q  106 agatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcaga 205  Q
     |||||||| |||| |||||| || ||| |||||||||| ||||| ||||| |||||| ||||||||| |||||||| ||||||||||||||| | || |    
T  13930606 tgatttaataaggtctatggtagaccacatataaagttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacgacata 13930705  T
Q  206 agacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||    
T  13930706 agacttatgggaccaaattgagacactttatagttagaggac 13930747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 14071035 - 14071275
Alignment:
Q  6 ggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaa 105  Q
    |||||||||||||||||||||||| | |||||| ||  ||||| |||||||||||  ||  || | |||||  | ||| |||| || ||||||||||  |    
T  14071035 ggaaaaaattaggtgtttgtggttcaatataagctacaatagacccctccatgatccaacggttttcattttaagaaatgatcaaacggttaaaaatata 14071134  T
Q  106 agatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcaga 205  Q
     |||||||| |||| |||||| || ||| |||||| ||| ||||| ||||| |||||| ||||||||| |||||||| ||||||||||||||| | ||||    
T  14071135 tgatttaataaggtctatggtagaccacatataaa-ttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaacgacaga 14071233  T
Q  206 agacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||    
T  14071234 agacttatgggaccaaattgagacactttatagttagaggac 14071275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 51726676 - 51726910
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaa-tgaaa 106  Q
    ||||||||||||||| ||||||  ||||||| ||| ||||||| |||| ||||  ||  ||||| ||||| ||| |  ||| || ||||||||| | |||    
T  51726676 aaaaaattaggtgttcgtggttctttataagctataatagatctctccttgatccaacggtctctatttaaaaagagtatcaaacggttaaaaaataaaa 51726775  T
Q  107 gatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaa 206  Q
    |||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||||||||||||  | ||| ||||| ||||| | |||||    
T  51726776 gatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggtgaggactaaaatagtaaacgacagaa 51726875  T
Q  207 gacttatgagaccaaattgagacactttattgtta 241  Q
    || |||||  |||||||||||||||||||| ||||    
T  51726876 gatttatggaaccaaattgagacactttatagtta 51726910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 21277188 - 21277042
Alignment:
Q  97 aaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggta 196  Q
    |||||| ||||||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| || ||||||||| ||| | || |||||| |||    
T  21277188 aaaaataaaagatttaataaggtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaaaactaatggagaggatcaaaatagta 21277089  T
Q  197 aatggcagaagacttatgagaccaaattgagacactttattgttagg 243  Q
    || ||||||||| ||||| ||||||||||||| ||||||| ||||||    
T  21277088 aacggcagaagatttatgggaccaaattgagatactttatagttagg 21277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22168064 - 22167837
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaa-gatcgaaaggttaaa 99  Q
    ||||||||||| ||||||||||||||||| |||||||  ||  ||||||| |||  ||||  ||| ||||||||||| |||||| |||| ||  ||||||    
T  22168064 atggaggaaaatattaggtgtttgtggttcattataaactacaatagatctctcattgatccaatggtctccatttaaaaaaaaagatcaaaccgttaaa 22167965  T
Q  100 aatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaat 199  Q
    ||| ||||||||||| |||| ||||||||| || ||||||||||  ||||||      |||||| ||||||||||||| || |  ||||||||  ||||     
T  22167964 aataaaagatttaataaggtctatggtggaccatctataaagtttgttcacc------atttaaggttaaaaactaacagagagaaccaaaataataaac 22167871  T
Q  200 ggcagaagacttatgagaccaaattgagacactt 233  Q
    ||||||||| ||||| ||||||||||| ||||||    
T  22167870 ggcagaagatttatgggaccaaattgaaacactt 22167837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 14169806 - 14169669
Alignment:
Q  104 aaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggca 203  Q
    ||||||| ||| |||| ||||||||  |||||||||||||| |||||| |||| |||||| ||||||||||||| || | ||||||||| ||||| | ||    
T  14169806 aaagattcaataaggtctatggtgggccacctataaagttggttcaccttagacatttaaggttaaaaactaacagataagaccaaaatagtaaacgaca 14169707  T
Q  204 gaagacttatgagaccaaattgagacactttattgtta 241  Q
     |||| ||||| ||||||||||||||| ||||| ||||    
T  14169706 aaagatttatgggaccaaattgagacattttatagtta 14169669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 8092781 - 8092642
Alignment:
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| |||| ||||||||| |||||||||||||| |||||| |||| |||||| |||||| ||||||||||| |||||||   ||||| ||  ||||    
T  8092781 atttaataaggtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaaggaccaaatcagtaaacggaggaag 8092682  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    | |||||  |||||||||| |||||| || |||| |||||    
T  8092681 atttatggaaccaaattgatacacttaatagttaagggac 8092642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 13641380 - 13641301
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  13641380 aaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggac 13641301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 25787161 - 25787236
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  25787161 actaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagttaggggac 25787236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 49141411 - 49141567
Alignment:
Q  90 aaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaa 189  Q
    ||||||||||| | || || || || |||| ||||||||| || || ||||  || |||||| |||| |||| |||||||||||||||||| ||||| ||    
T  49141411 aaaggttaaaattaaatgaatttataaggtctatggtggaacaactttaaatatggttcaccttagacatttgatgttaaaaactaacggagatgactaa 49141510  T
Q  190 aatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| ||||||| | ||||| |||||| |||| |||||| || |||| ||||    
T  49141511 aatggtaaacggcagaaaaattatgggaccaatttgaaacacttaatagttaaggga 49141567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40811541 - 40811403
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    |||||||||||||||||| ||| ||  || |||||||||||  ||||||| |||| ||||  ||  |||| |||||| |||||| ||| || ||||||||    
T  40811541 atggaggaaaaaattaggggtt-gttattcattataagttacaatagatctctccttgatccaacggtcttcatttaaaaaaaatatcaaacggttaaaa 40811443  T
Q  101 atgaaagatttaatgaggtttatggtggatcacctataaa 140  Q
    || ||||||||||| |||| ||||||||| ||||||||||    
T  40811442 ataaaagatttaataaggtctatggtggaccacctataaa 40811403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 36511325 - 36511403
Alignment:
Q  169 aaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||| ||||||||||| ||||| | ||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  36511325 aaaactaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaagggac 36511403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 47411103 - 47411029
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| ||||||||||| ||||| | || |||| ||||||||||||||||||||||||||| |||||||||    
T  47411103 actaacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttagggga 47411029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 36509992 - 36509855
Alignment:
Q  110 ttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagac 209  Q
    ||||| |||| |||||||||  | |||||| |||  | ||||||||| |||| | |||||||||||||||| |  |||||||| ||||| |||||||||     
T  36509992 ttaataaggtctatggtggaatatctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaacggcagaagat 36509893  T
Q  210 ttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||  |||||||||| ||||||||| |||| |||||    
T  36509892 ttatggaaccaaattgaaacactttatagttaagggac 36509855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 26056135 - 26056219
Alignment:
Q  163 atgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| |||||||| | ||||||||| ||||| | || |||| ||||| ||||||||||||||||||||| ||||||||||    
T  26056135 atgttaaaatctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagttaggggac 26056219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 9633958 - 9633819
Alignment:
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| |||| ||||||||| ||||| ||||  || |||||| |||| |||| |||||||||||||||||| | || |||||  ||||| ||  ||||    
T  9633958 atttaataaggtctatggtggaccacctttaaacatggttcaccttagacatttgatgttaaaaactaacggagaggatcaaaactgtaaacggttgaag 9633859  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    | ||||   |||||||||||||||||||| |||| |||||    
T  9633858 atttatataaccaaattgagacactttatagttaagggac 9633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 19466140 - 19466271
Alignment:
Q  110 ttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagac 209  Q
    ||||| |||| |||||||||  | |||||| |||  | ||||||||| |||| | |||||||||||||||| |  |||| ||| ||||| | |||||||     
T  19466140 ttaataaggtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacggagagaaccacaatagtaaacgacagaagat 19466239  T
Q  210 ttatgagaccaaattgagacactttattgtta 241  Q
    ||||| ||||||||||||||||||||| ||||    
T  19466240 ttatgggaccaaattgagacactttatagtta 19466271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21277338 - 21277255
Alignment:
Q  1 atggaggaaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaa 84  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| ||| ||  ||||| ||||| ||||||    
T  21277338 atggaggaaaaaattaggtgtttgtggttcattataagttacaatagattcctccataattcaacggtctctatttaaaaaaaa 21277255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 47136684 - 47136759
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| ||||| |||| |||| |||||| |||||||||||||||||||| ||||||||||    
T  47136684 actaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggac 47136759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 49139924 - 49139845
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| || |||||||| |||||  || ||||| ||||||||||||||||||||||||||| |||| |||||    
T  49139924 aaaaactaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacactttatagttatgggac 49139845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 3979311 - 3979385
Alignment:
Q  173 ctaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| | ||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  3979311 ctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaagggac 3979385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 13642491 - 13642617
Alignment:
Q  109 tttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaaga 208  Q
    |||||| | ||||||||| || ||||| |||||||  | |||| |||| |||||| |||||||||||||||||  |||||||||  |||| ||||||| |    
T  13642491 tttaataaagtttatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaacggcagaata 13642590  T
Q  209 cttatgagaccaaattgagacacttta 235  Q
     ||||| || |||| ||||||||||||    
T  13642591 gttatgggatcaaactgagacacttta 13642617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 14764399 - 14764287
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||| ||||   | |||||| || | |||||||||||||||||||| || ||||| ||||  ||||| | |||||||||||||||||||    
T  14764399 tatggtggaccacctttaaataaggttcaccttaaacatttaatgttaaaaactaacagagatgactaaaacagtaaacgacagaagacttatgagacca 14764300  T
Q  221 aattgagacactt 233  Q
    |||| | ||||||    
T  14764299 aattaacacactt 14764287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 40812604 - 40812683
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||   ||||||||||||||||| || |||| |||||    
T  40812604 aaaaactaacagaaaagaccaaaatagtaaatggcagaagagttatataaccaaattgagacacttaatagttaagggac 40812683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 44977404 - 44977265
Alignment:
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaag 207  Q
    ||||||| ||||||| |||||| ||||| ||||  || |||||| |||| |||| ||||||||||||||| || |||||||||   |  || ||||||||    
T  44977404 atttaataaggtttacggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagatgaccaaatgaggtaacggcagaag 44977305  T
Q  208 acttatgagaccaaattgagacactttattgttaggggac 247  Q
    || || | |||||  || ||||||||||| ||||||||||    
T  44977304 acataagggaccagtttaagacactttatagttaggggac 44977265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 16217559 - 16217489
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||||||| ||||||||||| ||||||| || |||| ||||  ||||||||||||||||||||| |||||    
T  16217559 actaacggagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacactttatagttag 16217489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 52742882 - 52743048
Alignment:
Q  81 aaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgga 180  Q
    |||| ||| ||||||||||| | ||| || |||| |||| ||||||| | ||||| ||||  || |||||| || | |||| ||||||||||||||||||    
T  52742882 aaaaaatcaaaaggttaaaatttaaaaatgtaattaggtctatggtgtaccacctttaaacatggttcaccttaaacatttgatgttaaaaactaacgga 52742981  T
Q  181 aatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
     | ||||| ||  ||||| | || || || || | |||||| |||||||||||||| ||||||||||    
T  52742982 gaggaccataacagtaaacgacataaaacctaagggaccaatttgagacactttatagttaggggac 52743048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 48935105 - 48935182
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| ||||||||||  |  || |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  48935105 aaactaacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggac 48935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 2972942 - 2973069
Alignment:
Q  109 tttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaaga 208  Q
    |||||| | |||||| || || || ||| ||||||| | |||| |||| |||||| ||||||||||||| |||| ||||| | | ||||| ||   ||||    
T  2972942 tttaataaagtttatagtagaccatctacaaagttggtacaccttagacatttaaagttaaaaactaacagaaaggaccacactagtaaacggggtaaga 2973041  T
Q  209 cttatgagaccaaattgagacactttat 236  Q
    |||||  |||||||||||||||||||||    
T  2973042 cttataggaccaaattgagacactttat 2973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 9592361 - 9592282
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| |||||||||||| |||||| ||||| | || |||| ||||| || |||||||| ||||||||| ||||||||||    
T  9592361 aaaaattaacggaaatgatcaaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagttaggggac 9592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 50679814 - 50679893
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||| | | ||||| ||  ||||||||||| ||||||||||||||||||||| |||| |||||    
T  50679814 aaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaagggac 50679893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 16218475 - 16218549
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||| |||||||||||  |||| | || |||| ||||| ||||||||||||| ||||||| |||||||||    
T  16218475 actaacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagttagggga 16218549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 14390379 - 14390302
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| | ||||||||||||||| |  |||||| |||||  |||||||||||||| ||||| ||||| ||||    
T  14390379 aaactaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagttagaggac 14390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 40811321 - 40811256
Alignment:
Q  165 gttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagaca 230  Q
    |||||||||||||||| |||||||||||  |||| |||| |||| ||||| || ||||||||||||    
T  40811321 gttaaaaactaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagaca 40811256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 47411460 - 47411517
Alignment:
Q  187 caaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggg 244  Q
    |||||| ||||| |||| |||| ||||| ||||||||||||||||||||| |||||||    
T  47411460 caaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggg 47411517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 52181304 - 52181377
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||| ||||||||||| |||||   || |||| ||||||||| ||||||||||||||||| ||||| ||||    
T  52181304 taacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagttagaggac 52181377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 38281115 - 38281023
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaa 100  Q
    ||||||||||||| |||||||| |||||||  ||  |||||||||||||||||  || | ||| |||||| | |||||||| || ||||||||    
T  38281115 aaaaaattaggtggttgtggttcattataatctacaatagatccctccatgatccaacaatcttcatttaaataaaagatcaaacggttaaaa 38281023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 3978161 - 3978094
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||||| | ||||||||| ||||| | ||||||| ||||| || |||||||||||||||||| ||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagtta 3978094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 25786075 - 25786012
Alignment:
Q  184 gaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||  |||| | || |||| ||||| ||||||||||||||||||||| ||||||||||    
T  25786075 gaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggac 25786012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 26055020 - 26054941
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||| |   ||||||||| ||||| | ||||||| |||||  |||||||||| ||||||||| ||||||||||    
T  26055020 aaaaactaacgaaggagaccaaaatagtaaacgacagaagatttatggaaccaaattgaaacactttatagttaggggac 26054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 35683146 - 35683099
Alignment:
Q  200 ggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||||| || | ||||||||||||||||||||| ||||||||||    
T  35683146 ggcagaagacataagggaccaaattgagacactttatagttaggggac 35683099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 19464721 - 19464655
Alignment:
Q  170 aaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||| ||| ||||||||||| ||||| ||||||||| || ||  |||||||||| |||||||||    
T  19464721 aaactaatggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacactttat 19464655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 21278217 - 21278275
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacact 232  Q
    ||||||| ||||| |||||||||||||  |||||| |||||||||||| |||| |||||    
T  21278217 taacggagatgactaaaatggtaaatgatagaagagttatgagaccaatttgaaacact 21278275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 2236902 - 2236857
Alignment:
Q  202 cagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||    
T  2236902 cagaagacataagggaccaaattgagacactttatagttaggggac 2236857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 20953411 - 20953338
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    |||| |||||||| | ||| ||||||||||||| |  |||| ||||  ||||||||||||||||||||| ||||    
T  20953411 aaaatctaacggagaggactaaaatggtaaatgacttaagatttataggaccaaattgagacactttatagtta 20953338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 23082025 - 23082142
Alignment:
Q  74 tttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaac 173  Q
    |||| |||||| ||| ||| ||||||| | ||| ||||| | ||||  |||||||| ||||| ||||  || |||||  |||| ||||  ||||||||||    
T  23082025 tttaaaaaaaaaatcaaaatgttaaaattaaaaaatttattaaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaac 23082124  T
Q  174 taacggaaatgaccaaaa 191  Q
    ||||||||| ||||||||    
T  23082125 taacggaaaggaccaaaa 23082142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 13929411 - 13929339
Alignment:
Q  175 aacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| | |||||| ||| |||| || |||||| ||| | ||||||||||||||||||||| |||| |||||    
T  13929411 aacggacaggaccaagatgataaacggaagaagatttacgggaccaaattgagacactttatagttaagggac 13929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 14171261 - 14171329
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||| ||| |||||||| |||||| ||||||| |||| || ||||| ||||||||||| ||| |||||    
T  14171261 aaaaattaaaggaaatgatcaaaatagtaaatgacagatgatttatgggaccaaattgaaacattttat 14171329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 191
Target Start/End: Original strand, 22766724 - 22766836
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacg 178  Q
    |||||| ||| ||||||||||| | ||| |||||   ||||  |||||||| ||||| ||||  || |||||  |||| ||||  |||||||||||||||    
T  22766724 aaaaaaaatcaaaaggttaaaattaaaaaatttatgaaggtccatggtggaccacctttaaatatggttcactttagatatttggtgttaaaaactaacg 22766823  T
Q  179 gaaatgaccaaaa 191  Q
    |||| ||||||||    
T  22766824 gaaaggaccaaaa 22766836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 40109515 - 40109419
Alignment:
Q  137 taaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    |||||||  |||||| |||| ||||||  |||||||||||| |||| ||||| | | ||||| ||  ||||| ||||| ||||||||||| ||||||    
T  40109515 taaagttacttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaacggatgaagatttatgggaccaaattgacacactt 40109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 45570475 - 45570379
Alignment:
Q  134 ctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagaca 230  Q
    |||||| |||| |||||| |||| |||||  |||||||| ||||  |   ||||||||| |  |||||||||||| |||||||||||| ||||||||    
T  45570475 ctataatgttggttcaccttagacatttagggttaaaaattaacaaagtggaccaaaataggtaatggcagaagagttatgagaccaagttgagaca 45570379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 47282 - 47126
Alignment:
Q  79 aaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacg 178  Q
    |||||||||| || |||||||| | ||| ||||||| | ||||||||| || |||||| |||||| ||||||| |||| |||||| |||||||| |||||    
T  47282 aaaaaagatcaaacggttaaaattaaaaaatttaataaagtttatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacg 47183  T
Q  179 gaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacacttta 235  Q
    || | ||||||||| ||||| || |||||| ||||| ||||||||||||||| ||||    
T  47182 gagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaattta 47126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 48449 - 48522
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgtta 241  Q
    ||||| ||||||| ||||||||||  ||||| ||||||| | ||||| || |||||||||||||||||| ||||    
T  48449 aaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagtta 48522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 16228 - 16033
Alignment:
Q  8 aaaaaattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaag 107  Q
    |||||||||||||||||||||| |||| ||| ||  ||||||| || | ||||  || |||||||| ||  |||||| ||| || |||||||||| ||||    
T  16228 aaaaaattaggtgtttgtggttcattacaagctacaatagatctctacttgatccaacagtctccaatttaaaaaaatatcaaacggttaaaaataaaag 16129  T
Q  108 atttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggca 203  Q
     |||||| |||| ||||||||| || ||||||||||| |||| | |||| |||||| |||||||||||||||| | ||| ||||| ||||| ||||    
T  16128 gtttaataaggtctatggtggaccatctataaagttggttcatcttagacatttaaggttaaaaactaacggagaggactaaaatagtaaacggca 16033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 599 - 700
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| ||||  ||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  599 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttagggg 698  T
Q  246 ac 247  Q
    ||    
T  699 ac 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 675 - 574
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| ||||  ||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  675 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttagggg 576  T
Q  246 ac 247  Q
    ||    
T  575 ac 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 9449 - 9550
Alignment:
Q  146 ttcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggg 245  Q
    |||||| ||||  ||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  9449 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttagggg 9548  T
Q  246 ac 247  Q
    ||    
T  9549 ac 9550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 8502 - 8424
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||||||||| |||||| |||| ||||||| | ||||| ||||| |||||| |||||||| ||||| |||||||||    
T  8502 aaaaactaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagacagtttatagttagggga 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 247
Target Start/End: Complemental strand, 1488 - 1255
Alignment:
Q  12 aattaggtgtttgtggtttattataagttatgatagatccctccatgatttaatagtctccatttataaaaaagatcgaaaggttaaaaatgaaagattt 111  Q
    ||||||||| |||| ||| |||||||| ||  |||||||||||| ||||| || | ||| |||||  |||||||||| || |||||||| | ||| |||     
T  1488 aattaggtggttgttgttcattataagctacaatagatccctccgtgattgaacaatcttcattttaaaaaaagatcaaacggttaaaattaaaaaatt- 1390  T
Q  112 aatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagactt 211  Q
    ||| | || |||||| |||| | |||||||||| |||||| || | |||||| |||||||| ||||||| | ||||| ||| ||||| || |||||  ||    
T  1389 aataaagtctatggtagatc-cttataaagttggttcaccttaaacatttaaggttaaaaaataacggagaggaccacaattgtaaacggtagaagggtt 1291  T
Q  212 atgagaccaaattgagacactttattgttaggggac 247  Q
    ||  ||||||||||||| |||||||  |||||||||    
T  1290 atatgaccaaattgagagactttataattaggggac 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 2258 - 2337
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||||| ||||||||| |||||  | |||||| ||||| ||||||||||| |||||||||  |||||||||    
T  2258 aaaaactaacggaaaggaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacactttataattaggggac 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 4200 - 4117
Alignment:
Q  67 gtctccatttataaaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcac 150  Q
    ||||||||||| |||||||||| ||  ||||||||| |||||||||||  ||||||||||||| |||||||||||||| |||||    
T  4200 gtctccatttaaaaaaaagatcaaacagttaaaaataaaagatttaatacggtttatggtggaccacctataaagttggttcac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 4217 - 4276
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactt 233  Q
    ||||||| | || |||||||||||| |||||| || |||||||| |||||||||||||||    
T  4217 taacggagaggaacaaaatggtaaacggcagacgagttatgagatcaaattgagacactt 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 512 - 587
Alignment:
Q  172 actaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||| | ||||||||| ||||| |||| |||| |||||| |||||||||||||||||||| ||||||||||    
T  512 actaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggac 587  T

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Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 96275 - 96204
Alignment:
Q  176 acggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||| ||||||||||||||||| || |||||| ||||  || |||||||||||||||||| ||||||||||    
T  96275 acggacatgaccaaaatggtaaacggaagaagatttatcggatcaaattgagacactttatagttaggggac 96204  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 22250 - 22176
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttag 242  Q
    ||||| ||||||| ||||||||||| ||||| | ||||||| ||||| || |||||||||||| ||||| |||||    
T  22250 aaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagttag 22176  T

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Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 41078 - 40977
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| ||||| ||||  || |||||| |||| |||| ||||||||||||||| || |  || ||||  ||||| | |||||||||||||||||||    
T  41078 tatggtggaccacctttaaatatggttcaccttagacatttgatgttaaaaactaacagagagaactaaaacagtaaacgacagaagacttatgagacca 40979  T
Q  221 aa 222  Q
    ||    
T  40978 aa 40977  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 145868 - 145940
Alignment:
Q  174 taacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttagggga 246  Q
    ||||||| ||||||||||| ||||| |||| |||| ||||  ||||||||| ||||| ||||| |||||||||    
T  145868 taacggagatgaccaaaatagtaaacggcataagatttattggaccaaattaagacattttatagttagggga 145940  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 56605 - 56772
Alignment:
Q  80 aaaaagatcgaaaggttaaaaatgaaagatttaatgaggtttatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacgg 179  Q
    ||||| ||| ||||||||||| | ||| ||||||| |||| | ||||||| || || ||||  |  ||  || |||| |||| ||||||||||||||  |    
T  56605 aaaaaaatcaaaaggttaaaatttaaaaatttaataaggtctttggtggaccatctttaaacatagtttcccttagatatttgatgttaaaaactaatag 56704  T
Q  180 aaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    | | || | |||  ||||| ||||||||| ||||  |||||||||||||||||||||  |||||||||    
T  56705 agaggatctaaacagtaaacggcagaagatttataggaccaaattgagacactttataattaggggac 56772  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 54714 - 54646
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttat 236  Q
    ||||||||||||| | ||||| | |||||||  |  ||||| ||||| |||||||||||||||||||||    
T  54714 aaaaactaacggagaggaccacattggtaaacagaggaagatttatgggaccaaattgagacactttat 54646  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 72979 - 73058
Alignment:
Q  168 aaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||||  |  || | |||||||| || |||||||| ||| |||||||||||||||||||||    
T  72979 aaaaactaacggagaggaccaaaagaggtaacgacagaagacataagagaccaatttgtgacactttattgttaggggac 73058  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 13150 - 13276
Alignment:
Q  121 tatggtggatcacctataaagttgattcaccatagagatttaatgttaaaaactaacggaaatgaccaaaatggtaaatggcagaagacttatgagacca 220  Q
    ||||||||| || || ||||  || |||||| |||| |||| ||||||||| |||| ||| | ||||||||  |  || || |||||| ||||| ||| |    
T  13150 tatggtggaccatctttaaatatggttcaccttagacatttgatgttaaaacctaatggataggaccaaaagaggtaacggaagaagagttatgggacga 13249  T
Q  221 aattgagacactttattgttaggggac 247  Q
    |||||||||| ||||| ||||||||||    
T  13250 aattgagacattttatagttaggggac 13276  T

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Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 11829 - 11750
Alignment:
Q  168 aaaaactaacggaaatgaccaaaat-ggtaaatggcagaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    ||||||||||||| | ||||||||| ||||| ||| ||||||| || | ||||||||||| |||||||||  |||||||||    
T  11829 aaaaactaacggagaggaccaaaataggtaactgg-agaagacataagggaccaaattgaaacactttataattaggggac 11750  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 5245 - 5213
Alignment:
Q  215 agaccaaattgagacactttattgttaggggac 247  Q
    |||||||||||||||||||||| ||||||||||    
T  5245 agaccaaattgagacactttatagttaggggac 5213  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 23494 - 23450
Alignment:
Q  203 agaagacttatgagaccaaattgagacactttattgttaggggac 247  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  23494 agaagagttatgggaccaaattgagacattttatagttaggggac 23450  T

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