View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3063_high_8 (Length: 452)
Name: NF3063_high_8
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3063_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 19 - 439
Target Start/End: Original strand, 36207007 - 36207427
Alignment:
| Q |
19 |
ggtgatgttgtagcatgagtgactgtcttatcattgttcttttcattttgggcgtgttgctgactatattgaagggactctaggagagaaacgatcaagt |
118 |
Q |
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| T |
36207007 |
ggtgatgttgtagcatgagtgactgtcttatcattgttcttttcattttgggcgtgttgctgactatattgaagggactctaggagagaaacgatcaagt |
36207106 |
T |
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| Q |
119 |
acaaataggtggagccatagaacagaactgaccaatagaaacccaaaatagtataaatcacaataaccagaaccttcccagtgaagatgaactttaccgg |
218 |
Q |
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| T |
36207107 |
acaaataggtggagccatagaacagaactgaccaatagaaacccaaaatagtataaatcacaataaccagaaccttcccagtgaagatgaactttaccgg |
36207206 |
T |
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| Q |
219 |
agaaaaaagatcgatatcgaaagttccaagtagaacccagcaaaaaacaatgtaactgcagctgagagagggctgagagcacaaagtgagagaaccccag |
318 |
Q |
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| T |
36207207 |
agaaaaaagatcgatatcgaaagttccaagtagaacccagcaaaaaacaatgtaactgcagctgagagagggctgagagcacaaagtgagagaaccccag |
36207306 |
T |
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| Q |
319 |
caacacacaaggggaaccctcgcctgactctcaccggaaaggggttaagtcgcctaaagatgtagagatctgtttctttttcgtgaaagaggtagaggaa |
418 |
Q |
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| T |
36207307 |
caacacacaaggggaaccctcgcctgactctcaccggaaaggggttaagtcgcctaaagatgtagagatctgtttctttttcgtgaaagaggtagaggaa |
36207406 |
T |
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| Q |
419 |
tgaatagatcgaagttgagag |
439 |
Q |
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| T |
36207407 |
tgaatagatcgaagttgagag |
36207427 |
T |
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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 10989280 - 10989228
Alignment:
| Q |
22 |
gatgttgtagcatgagtgactgtcttatcattgttcttttcattttgggcgtg |
74 |
Q |
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| T |
10989280 |
gatgttgtagcataagtgactaccttatcattgttcttttcagtttgggcgtg |
10989228 |
T |
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