View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3063_low_35 (Length: 256)
Name: NF3063_low_35
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3063_low_35 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 33374562 - 33374800
Alignment:
| Q |
18 |
tcatatacaagaaagtgatttccatcatatcctgaagagacacctattagtttcactagatttgcatgatttaccttttgtaaaatcaccaactcttctg |
117 |
Q |
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| T |
33374562 |
tcatatacaagaaagtgatttccatcatatcctgaagagacacctactagtttcactagatttgcatgatttaccttttgtaaaatcatcaactcttctg |
33374661 |
T |
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| Q |
118 |
tgactgtgatatgtccctttacatttttcacagccaaaactaaaccatctattttagctttgtacactgatttccctatcttacacatttcactgaggtt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
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| T |
33374662 |
tgactgtgatatgtccctttacatttttcacagccaaaaccaaaccatctattttagctttgtacactgatttccctatcttacacatttcattaaggtt |
33374761 |
T |
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| Q |
218 |
cattgtagctttcataattatgccaacttcatacactgt |
256 |
Q |
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| T |
33374762 |
catggtagctttcataatcataccaacttcatacactgt |
33374800 |
T |
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