View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3063_low_41 (Length: 248)
Name: NF3063_low_41
Description: NF3063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3063_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44631519 - 44631758
Alignment:
| Q |
1 |
ccaccatgattatgaggctctatgacaacacctataaacgcgacccttcgttgtcccatcagttacacaatcttcctatcttaaaatctctcattttttg |
100 |
Q |
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| T |
44631519 |
ccaccatgattatgaggctctatgacaacacctataaacgcaacccttcgttgttccatcagttacgcaatcttcctatcttaaaatctctcattttttg |
44631618 |
T |
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| Q |
101 |
ctttcttattaacttaaacatcagagtgcttgcatgtaccctaaactcgtaatcaacgttgttgatgcttgttgcatactgttctcctgatcaaaacaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44631619 |
ctttcttattaacttaaacatcagagtgcttgcatgtaccctaaactcgtaatcaacgtcgttgatgcttgttgcatactgttctcctgatcaaaacaga |
44631718 |
T |
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| Q |
201 |
tcaactatgtaatggttgcaatttatttatcctccctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
44631719 |
tcaactatgtaatggttgcaatttatttatcctccctttg |
44631758 |
T |
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