View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3064_high_3 (Length: 608)
Name: NF3064_high_3
Description: NF3064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3064_high_3 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
| [»] scaffold0734 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 348; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 11170801 - 11171240
Alignment:
| Q |
19 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170801 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggc |
11170900 |
T |
|
| Q |
119 |
gttgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccat |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | | ||| ||||||||| |||||| |||||||||| |
|
|
| T |
11170901 |
gttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactattgatccaaggaaggtttctgctatctcgcgcattttcaccaataccat |
11171000 |
T |
|
| Q |
219 |
cgatgatatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccac |
318 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11171001 |
ggatgagatttcttcagcagcaaaatgtttttcctcgtcattatagttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccac |
11171100 |
T |
|
| Q |
319 |
aacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatgnnnnnnn |
418 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11171101 |
aacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatgaaaaaca |
11171200 |
T |
|
| Q |
419 |
nttggatcgctttatgaattaatcattctatgtggatttg |
458 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11171201 |
attggatcgctttatgaattaatcattctatgtggatttg |
11171240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 30 - 408
Target Start/End: Original strand, 11209634 - 11210012
Alignment:
| Q |
30 |
gccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtca |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209634 |
gccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtca |
11209733 |
T |
|
| Q |
130 |
ttaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgatattt |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||||||||||||| | ||||| ||| |||| |||||| ||||||||||| ||||| |||| |
|
|
| T |
11209734 |
ttaaagtatgcaggcacagttataacaacatcatccactgttgatccaaggaaggcttctgctgtctctcgcattttcgccaataccatggatgagattt |
11209833 |
T |
|
| Q |
230 |
cttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatc |
329 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11209834 |
cttcagcagcaaaatgcttttcctcgtctttatagttaacaacaatcatgggtttgtcatttaggtcgccaattactttgaatggccacaacttcacatc |
11209933 |
T |
|
| Q |
330 |
actttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacact |
408 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209934 |
actttctactatggggtcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacact |
11210012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 391
Target Start/End: Original strand, 11196954 - 11197326
Alignment:
| Q |
19 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggc |
118 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
11196954 |
ttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatctcgagtggactggc |
11197053 |
T |
|
| Q |
119 |
gttgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccat |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11197054 |
gttgtgagtcattaaagtaagcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccat |
11197153 |
T |
|
| Q |
219 |
cgatgatatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccac |
318 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
11197154 |
cgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcattgaggtcgccaattactttgaagggccac |
11197253 |
T |
|
| Q |
319 |
aacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaa |
391 |
Q |
| |
|
|||||| |||||||||||| || | |||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11197254 |
gacttcatatcactttgtacgattgagtcgcaaaacttcctaccaattagcctctttgcatctacaaaacaaa |
11197326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 30 - 396
Target Start/End: Original strand, 11276196 - 11276562
Alignment:
| Q |
30 |
gccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtca |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11276196 |
gccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatctcgagtagactggcgctgtgagtca |
11276295 |
T |
|
| Q |
130 |
ttaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgatattt |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||||||| |||||| ||||||||||| ||||| |||| |
|
|
| T |
11276296 |
ttaaagtatgcaggcacagttataacaacatcctccactgttaatccaaggaaggcttctgctatctcgcgcattttcgccaataccatggatgagattt |
11276395 |
T |
|
| Q |
230 |
cttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatc |
329 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11276396 |
cttcagcagtaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatc |
11276495 |
T |
|
| Q |
330 |
actttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagaga |
396 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11276496 |
actttgtactatgggatcactaaatttccgaccaattagcctctttgcatctacaaaacaaaagaga |
11276562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 19 - 411
Target Start/End: Original strand, 11156501 - 11156895
Alignment:
| Q |
19 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggc |
118 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| | || ||||||| |
|
|
| T |
11156501 |
ttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggc |
11156600 |
T |
|
| Q |
119 |
gttgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccat |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11156601 |
gttgtgagtcattaaagtaagcaggcacagttataacaacatccttcactgttgatccaaggtaaacttcagctatctcggccatttttgccaataccat |
11156700 |
T |
|
| Q |
219 |
cgatgatatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccac |
318 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||| |
|
|
| T |
11156701 |
cgatgagatttcttcagcagcaaaatgcttttcctcgtctttatagttaacaacaatcatgggtttgtcattgaggttgccaattactttgaagggccac |
11156800 |
T |
|
| Q |
319 |
aacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaa--aagagagttgtgtacactatg |
411 |
Q |
| |
|
|||||| |||||||||||| || | |||||||| |||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
11156801 |
gacttcatatcactttgtacgattgagtcgcaaaacttcctaccaattagcctctttgcatctacaaaacaaacaaaagagttgagtacactatg |
11156895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 27 - 391
Target Start/End: Complemental strand, 11241375 - 11241005
Alignment:
| Q |
27 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgag |
126 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||| ||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11241375 |
aaggccatatgcaattgcaactgcagtaggctcagtgattattcacaaaactttgaggccagcaatagcacccgcatctcgaatagactggcgttgtgag |
11241276 |
T |
|
| Q |
127 |
tcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgata |
226 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
11241275 |
tcattaaagtaagcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatcttggccatttttgccaataccatcgatgaga |
11241176 |
T |
|
| Q |
227 |
tttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaacttcac |
326 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
11241175 |
tttcttcagcagcgaaatgcttttcctcgtcattatagttaacaatagtcatgtgtttgtcattcaggtcgccaattactttgaagggccacaacttcat |
11241076 |
T |
|
| Q |
327 |
atcactttgtactatgggatcgca------aaatttccgaccaattagcctctttgcatctacaaaacaaa |
391 |
Q |
| |
|
||||||||||| ||||| || || ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11241075 |
atcactttgtatgatggggtcacaaaacttaaacttcctaccaattagcctctttgcatctacaaaacaaa |
11241005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 290
Target Start/End: Original strand, 11200119 - 11200394
Alignment:
| Q |
19 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggc |
118 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11200119 |
ttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatctcaagtagactggc |
11200218 |
T |
|
| Q |
119 |
gt----tgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaata |
214 |
Q |
| |
|
|| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |
|
|
| T |
11200219 |
gtacgttgtgaatcattaaagtatgtaggcacaattataacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaata |
11200318 |
T |
|
| Q |
215 |
ccatcgatgatatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcatt |
290 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11200319 |
ccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcatt |
11200394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 19 - 290
Target Start/End: Original strand, 11161368 - 11161651
Alignment:
| Q |
19 |
ttcaagtcaaggccatatgcaattgcagctgcagtaggct--------cattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagt |
110 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||||||||| |||||| || |||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
11161368 |
ttcatgtcaagaccatatgcaattgcatctgcagtaggctagtagagtcattgattactcgcataacattaaggccaacaatagcacccgcatctcgagt |
11161467 |
T |
|
| Q |
111 |
agactggcgt----tgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttt |
206 |
Q |
| |
|
|||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
11161468 |
agactggcgtacgttgtgaaacattaaagtatgtaggcacaattataacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttt |
11161567 |
T |
|
| Q |
207 |
tgccaataccatcgatgatatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcatt |
290 |
Q |
| |
|
|| ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11161568 |
tgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcatt |
11161651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 24 - 387
Target Start/End: Original strand, 11133230 - 11133593
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgt |
123 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||| |||| |||||||||||| ||||| || |||||| |||| ||||||| ||||| |||||||| |
|
|
| T |
11133230 |
gtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatctctagtagcttggcgttgc |
11133329 |
T |
|
| Q |
124 |
gagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatg |
223 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||| || ||||| ||||||| ||||||||| |||| |
|
|
| T |
11133330 |
gagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatctcacgaatttttgtcaataccattgatg |
11133429 |
T |
|
| Q |
224 |
atatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaactt |
323 |
Q |
| |
|
||||||| |||||||||||||| |||||||| |||| || || |||||||| | ||||||||||| | | ||||||||||||| ||||||||||| || |
|
|
| T |
11133430 |
atatttcctcagcagcaaaatgtttttcctctccattgtaattgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaattt |
11133529 |
T |
|
| Q |
324 |
cacatcactttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaa |
387 |
Q |
| |
|
|| |||||| || ||||| || || | ||||| | |||||| |||||||| |||||||||||| |
|
|
| T |
11133530 |
catatcactctgaactatagggtcactaaattctctaccaatgagcctcttcgcatctacaaaa |
11133593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 528 - 598
Target Start/End: Original strand, 11171312 - 11171382
Alignment:
| Q |
528 |
ttaaccccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagctcctatg |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11171312 |
ttaaccccgtaagtaatacaatcttgggattttggtcccttataaaaaacaataacaaatcagctcctatg |
11171382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 590
Target Start/End: Original strand, 8382104 - 8382149
Alignment:
| Q |
545 |
acaatcttgggattttggtcccttgtaaaaaacaataacaaatcag |
590 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||||||||||||| |
|
|
| T |
8382104 |
acaatcttgcaattttgatcccttataaaaaacaataacaaatcag |
8382149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 250; Significance: 1e-138; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 24 - 457
Target Start/End: Original strand, 1121 - 1538
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgt |
123 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
1121 |
gtcaaagccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatctcgagtagattggcgttgt |
1220 |
T |
|
| Q |
124 |
gagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatg |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||| ||||| |||||| ||||||||||| |||| |
|
|
| T |
1221 |
gagtcattaaagtatgcaggcacagttataacaacatcctccactgttgatccaaggaaggcttctgctgtctcgcgcattttcgccaataccatggatg |
1320 |
T |
|
| Q |
224 |
atatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaactt |
323 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||| |
|
|
| T |
1321 |
agatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttat------------------gtatgaatggccacaactt |
1402 |
T |
|
| Q |
324 |
cacatcactttgtactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatg--nnnnnnnntt |
421 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1403 |
cacatcactttctactatgggatcgcaaaatttccgaccaattagcctctttgcatctacaaaacaaaagagagttgtgtacactatgaaaaaaacaatt |
1502 |
T |
|
| Q |
422 |
ggatcgctttatgaattaatcattctatgtggattt |
457 |
Q |
| |
|
| ||||||||||| |||||||||| ||||||||||| |
|
|
| T |
1503 |
gtatcgctttatgtattaatcattttatgtggattt |
1538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 8382805 - 8382727
Alignment:
| Q |
27 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||| ||| ||||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
8382805 |
aaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatct |
8382727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 8602213 - 8602291
Alignment:
| Q |
27 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| |||||||| ||||| |||||| |
|
|
| T |
8602213 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatct |
8602291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 13333388 - 13333307
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| |||||| || | ||| ||||||||||||||||| |||||| |
|
|
| T |
13333388 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatct |
13333307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 10494306 - 10494226
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| ||||||||||||||||| ||||| |
|
|
| T |
10494306 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatc |
10494226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 8585638 - 8585558
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | ||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
8585638 |
gtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatc |
8585558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 591
Target Start/End: Original strand, 2407345 - 2407404
Alignment:
| Q |
532 |
ccccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||||| | |||||||||||||||||||||| |
|
|
| T |
2407345 |
ccccctaagtatcacaatcttgcgattttggtcccctataaaaaacaataacaaatcagc |
2407404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 8628768 - 8628847
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcat |
103 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | ||||||||| ||||||||||| ||||| |||| |
|
|
| T |
8628768 |
gtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcat |
8628847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 545 - 591
Target Start/End: Original strand, 7875716 - 7875762
Alignment:
| Q |
545 |
acaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
||||||||| |||||||||||| | |||||||||||||||||||||| |
|
|
| T |
7875716 |
acaatcttgcgattttggtcccctataaaaaacaataacaaatcagc |
7875762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 27830807 - 27830733
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
98 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||| | | ||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
27830807 |
gtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc |
27830733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 29577594 - 29577532
Alignment:
| Q |
31 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaata |
93 |
Q |
| |
|
|||||||||| |||||| ||||| || ||||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
29577594 |
ccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaata |
29577532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 8654686 - 8654767
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||||||| || || || || || |||||||| ||||| |||||| |
|
|
| T |
8654686 |
gtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatct |
8654767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 8667655 - 8667736
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| || |||||||||| ||| |||||| |
|
|
| T |
8667655 |
gtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatct |
8667736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 6789749 - 6789829
Alignment:
| Q |
25 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||||| ||||| || || || ||||||| |||||| |||||||| || |||||||| ||||| |||||| |
|
|
| T |
6789749 |
tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatct |
6789829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 8671562 - 8671482
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| || |||||||||| ||| ||||| |
|
|
| T |
8671562 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatc |
8671482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 591
Target Start/End: Original strand, 40352657 - 40352717
Alignment:
| Q |
531 |
accccgtaagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||| | | |||||||||||||||||||||| |
|
|
| T |
40352657 |
accccctaagtatcacaatcttgcgattttggtcgcctataaaaaacaataacaaatcagc |
40352717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 3147515 - 3147589
Alignment:
| Q |
31 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
||||| ||||| || || |||||||| ||||||| ||| ||||||| ||| |||||||||||| |||| |||||| |
|
|
| T |
3147515 |
ccatacgcaatagctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatct |
3147589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 7877662 - 7877584
Alignment:
| Q |
27 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||||| | ||| ||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
7877662 |
aaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatct |
7877584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 8538275 - 8538353
Alignment:
| Q |
27 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||| ||||||| ||||| || ||||| ||||||| ||| ||||| ||||||||||||||||| |||| |||||| |
|
|
| T |
8538275 |
aaggccgtatgcaagagcagcagctgtaggttcattgattatccgcattacattgaggccagcaatgacaccagcatct |
8538353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 587
Target Start/End: Original strand, 41415672 - 41415714
Alignment:
| Q |
545 |
acaatcttgggattttggtcccttgtaaaaaacaataacaaat |
587 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
41415672 |
acaatcttgcgattttggccccttataaaaaacaataacaaat |
41415714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0734 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0734
Description:
Target: scaffold0734; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 1908 - 1962
Alignment:
| Q |
537 |
taagtaatacaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
||||||| ||||||||| |||||||||||| | |||||||||||||||||||||| |
|
|
| T |
1908 |
taagtaacacaatcttgagattttggtcccctataaaaaacaataacaaatcagc |
1962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0734; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 6714 - 6770
Alignment:
| Q |
354 |
tttccgaccaattagcctctttgcatctacaaaacaaa-ag-agagttgtgtacact |
408 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
6714 |
tttccaaccaattagcctctttgcatctacaaaacaaacagaagagttgtgtacact |
6770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 9335822 - 9335742
Alignment:
| Q |
25 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| ||||||||||||| ||| |||||| |
|
|
| T |
9335822 |
tcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatct |
9335742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 30775489 - 30775568
Alignment:
| Q |
25 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||||| | ||||| ||||||||| || |||||||| ||||| ||||| |
|
|
| T |
30775489 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
30775568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 35132684 - 35132765
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | || || |||||||||| | |||||||||||||| |||||| |
|
|
| T |
35132684 |
gtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcaccagcatct |
35132765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000009; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 7542462 - 7542543
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | | | ||||||||||||||||||||| |||||||||||| |
|
|
| T |
7542462 |
gtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatct |
7542543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 16661924 - 16661844
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||||||||||||||| || |||||||| || ||||||| ||| | || ||| || ||||||||||| ||||| ||||| |
|
|
| T |
16661924 |
gtcaaggccatatgcaatagctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatc |
16661844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 16657449 - 16657368
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatct |
105 |
Q |
| |
|
|||||| ||||||||||| || || |||||||| ||||||| ||||| || ||||| |||||||| || ||||| |||||| |
|
|
| T |
16657449 |
gtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatct |
16657368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 14703644 - 14703724
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||||||||||||||| || || || ||||| ||||| | || | ||||||||||||||| |||||| |||| ||||| |
|
|
| T |
14703644 |
gtcaaggccatatgcaatagctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagcatc |
14703724 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 545 - 589
Target Start/End: Original strand, 5003527 - 5003571
Alignment:
| Q |
545 |
acaatcttgggattttggtcccttgtaaaaaacaataacaaatca |
589 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||||||||||||||| |
|
|
| T |
5003527 |
acaatcttgcgattttgatcccttataaaaaacaataacaaatca |
5003571 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 34466725 - 34466645
Alignment:
| Q |
24 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcatc |
104 |
Q |
| |
|
|||||| ||||||||||| || || ||||| || ||||||| |||| ||| |||||| ||||||||||||| ||| ||||| |
|
|
| T |
34466725 |
gtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatc |
34466645 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 591
Target Start/End: Original strand, 33096059 - 33096104
Alignment:
| Q |
546 |
caatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
33096059 |
caatcttgcaattttggtcccttataaaaaataataacaaatcagc |
33096104 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 15595516 - 15595571
Alignment:
| Q |
265 |
ttaacaacaatcataggtttgtcattcaggtcaccaattactttgaatggccacaactt |
323 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||| || ||||||||||||||||| |
|
|
| T |
15595516 |
ttaacaataatcatgggtttgtcattca---caccaatgaccttgaatggccacaactt |
15595571 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 591
Target Start/End: Original strand, 18896459 - 18896505
Alignment:
| Q |
545 |
acaatcttgggattttggtcccttgtaaaaaacaataacaaatcagc |
591 |
Q |
| |
|
||||||||| |||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
18896459 |
acaatcttgcgattttggtcccctataaaaaacaataataaatcagc |
18896505 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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