View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3064_low_2 (Length: 645)

Name: NF3064_low_2
Description: NF3064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3064_low_2
NF3064_low_2
[»] chr5 (26 HSPs)
chr5 (20-617)||(6938505-6939082)
chr5 (470-521)||(37611188-37611239)
chr5 (470-521)||(37787918-37787969)
chr5 (476-514)||(5531086-5531124)
chr5 (198-252)||(7097343-7097397)
chr5 (411-452)||(16937800-16937841)
chr5 (468-524)||(8089980-8090036)
chr5 (199-259)||(26516180-26516240)
chr5 (478-541)||(10152388-10152451)
chr5 (468-519)||(14295550-14295601)
chr5 (407-454)||(30585764-30585811)
chr5 (407-454)||(42034168-42034215)
chr5 (198-252)||(6738542-6738596)
chr5 (198-252)||(13244616-13244670)
chr5 (407-453)||(25705575-25705621)
chr5 (196-246)||(41052769-41052819)
chr5 (407-448)||(10771809-10771850)
chr5 (407-452)||(25720334-25720379)
chr5 (407-452)||(26004914-26004959)
chr5 (476-517)||(26516459-26516500)
chr5 (198-259)||(29115341-29115402)
chr5 (471-516)||(29363055-29363100)
chr5 (468-516)||(6109527-6109575)
chr5 (407-451)||(11153364-11153408)
chr5 (407-454)||(17258797-17258845)
chr5 (476-516)||(34690925-34690965)
[»] chr4 (21 HSPs)
chr4 (480-542)||(2996629-2996691)
chr4 (468-523)||(33534140-33534195)
chr4 (406-447)||(30585659-30585700)
chr4 (198-259)||(47771876-47771937)
chr4 (477-521)||(6428071-6428115)
chr4 (411-451)||(35571549-35571589)
chr4 (405-453)||(38478818-38478866)
chr4 (406-454)||(45104311-45104359)
chr4 (411-454)||(18815135-18815178)
chr4 (198-257)||(33640989-33641048)
chr4 (196-250)||(17823017-17823071)
chr4 (411-453)||(54426155-54426197)
chr4 (413-454)||(23319965-23320006)
chr4 (410-454)||(26780-26824)
chr4 (468-540)||(4071922-4071994)
chr4 (198-257)||(4243221-4243281)
chr4 (197-252)||(24193465-24193520)
chr4 (150-178)||(27970043-27970071)
chr4 (198-246)||(39886715-39886763)
chr4 (496-524)||(52428737-52428765)
chr4 (480-540)||(53315382-53315442)
[»] chr3 (21 HSPs)
chr3 (471-521)||(24281094-24281144)
chr3 (407-454)||(19679243-19679290)
chr3 (471-521)||(34707469-34707519)
chr3 (471-540)||(34382989-34383058)
chr3 (476-544)||(1810029-1810097)
chr3 (496-544)||(50211807-50211855)
chr3 (407-454)||(44014713-44014760)
chr3 (471-521)||(37273181-37273231)
chr3 (412-454)||(53762309-53762351)
chr3 (480-521)||(25182960-25183001)
chr3 (407-444)||(27795938-27795975)
chr3 (407-452)||(40240738-40240783)
chr3 (476-521)||(40880921-40880966)
chr3 (468-521)||(42817195-42817248)
chr3 (497-542)||(47584523-47584568)
chr3 (487-539)||(2175804-2175856)
chr3 (501-541)||(2413632-2413672)
chr3 (471-515)||(3015822-3015866)
chr3 (407-451)||(25459548-25459592)
chr3 (411-451)||(39980841-39980881)
chr3 (411-451)||(49605769-49605809)
[»] chr2 (15 HSPs)
chr2 (476-542)||(37474817-37474883)
chr2 (198-247)||(41702326-41702375)
chr2 (407-451)||(30990357-30990401)
chr2 (409-453)||(33503108-33503152)
chr2 (468-516)||(43065428-43065476)
chr2 (407-450)||(11514004-11514047)
chr2 (407-450)||(43259943-43259986)
chr2 (468-511)||(44606093-44606136)
chr2 (471-521)||(16398444-16398494)
chr2 (198-259)||(4550658-4550719)
chr2 (409-454)||(15370238-15370283)
chr2 (196-249)||(42974231-42974284)
chr2 (481-521)||(1494419-1494459)
chr2 (403-451)||(33942010-33942058)
chr2 (199-247)||(39567784-39567832)
[»] chr6 (22 HSPs)
chr6 (464-541)||(1669751-1669828)
chr6 (468-543)||(9027622-9027697)
chr6 (198-252)||(33828527-33828581)
chr6 (455-524)||(10616511-10616580)
chr6 (407-454)||(12111075-12111122)
chr6 (468-515)||(30863290-30863337)
chr6 (225-259)||(2767796-2767830)
chr6 (197-259)||(2785796-2785858)
chr6 (407-453)||(32861650-32861696)
chr6 (468-542)||(2167108-2167184)
chr6 (468-542)||(2178741-2178817)
chr6 (198-259)||(9027458-9027519)
chr6 (480-521)||(31338032-31338073)
chr6 (408-437)||(31338086-31338115)
chr6 (468-521)||(32577959-32578012)
chr6 (468-521)||(34939557-34939610)
chr6 (411-451)||(835179-835219)
chr6 (204-259)||(6654501-6654557)
chr6 (411-451)||(7490251-7490291)
chr6 (192-252)||(14340938-14340998)
chr6 (487-539)||(19752761-19752813)
chr6 (476-516)||(20377898-20377938)
[»] chr1 (14 HSPs)
chr1 (407-447)||(2832080-2832120)
chr1 (476-524)||(6262790-6262838)
chr1 (464-541)||(6659720-6659797)
chr1 (200-252)||(24263274-24263326)
chr1 (407-454)||(32515356-32515403)
chr1 (411-454)||(38247439-38247482)
chr1 (468-542)||(27140522-27140596)
chr1 (198-252)||(48133074-48133128)
chr1 (409-451)||(51957314-51957356)
chr1 (198-247)||(10744188-10744237)
chr1 (476-521)||(38867804-38867849)
chr1 (468-504)||(15064825-15064861)
chr1 (223-251)||(19389808-19389836)
chr1 (468-516)||(38170668-38170716)
[»] chr8 (19 HSPs)
chr8 (407-454)||(9700109-9700156)
chr8 (407-454)||(31884855-31884902)
chr8 (198-252)||(2482742-2482796)
chr8 (470-524)||(30259160-30259214)
chr8 (199-252)||(12833260-12833313)
chr8 (468-521)||(30918157-30918209)
chr8 (410-454)||(31891922-31891966)
chr8 (197-252)||(6950216-6950271)
chr8 (411-450)||(9130238-9130277)
chr8 (407-454)||(16162868-16162915)
chr8 (480-527)||(30987958-30988005)
chr8 (201-247)||(41442576-41442622)
chr8 (411-453)||(43045641-43045683)
chr8 (407-453)||(44236739-44236785)
chr8 (468-517)||(11183589-11183638)
chr8 (468-541)||(28769292-28769365)
chr8 (468-516)||(14949910-14949958)
chr8 (496-524)||(27412852-27412880)
chr8 (409-453)||(38874757-38874801)
[»] chr7 (16 HSPs)
chr7 (468-542)||(33894671-33894745)
chr7 (468-516)||(46082080-46082128)
chr7 (198-241)||(6824815-6824858)
chr7 (198-245)||(34672892-34672939)
chr7 (411-454)||(40252038-40252081)
chr7 (407-437)||(8094414-8094444)
chr7 (200-246)||(32156891-32156937)
chr7 (403-449)||(32791665-32791711)
chr7 (199-248)||(22204392-22204441)
chr7 (199-248)||(22230298-22230347)
chr7 (407-452)||(24363517-24363562)
chr7 (228-260)||(19624137-19624169)
chr7 (405-437)||(22759267-22759299)
chr7 (480-516)||(28340398-28340434)
chr7 (407-451)||(29363616-29363660)
chr7 (196-252)||(46945773-46945829)
[»] scaffold0254 (1 HSPs)
scaffold0254 (468-542)||(3517-3593)
[»] scaffold0147 (1 HSPs)
scaffold0147 (468-516)||(12682-12730)
[»] scaffold0020 (1 HSPs)
scaffold0020 (418-454)||(159888-159924)


Alignment Details
Target: chr5 (Bit Score: 477; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 20 - 617
Target Start/End: Complemental strand, 6939082 - 6938505
Alignment:
Q  20 ctattgtttctactttagcagctttgggacttttcgtatttgctagattggattttggtgtttctctgaaggatctctctgctgttgcattgccttatga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6939082 ctattgtttctactttagcagctttgggacttttcgtatttgctagattggattttggtgtttctttgaaggatctctctgctgttgcattgccttatga 6938983  T
Q  120 acaggttccctcccactcttaacttaacactattttcatataagttataacttgttttcgtcaagaagatcttgaacttgtttggataaacagtttaatt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6938982 acaggttccctcccactcttaacttaacactattttcatataagttataacttgttttcgtcatgaagatcttgaacttgtttggataaacagtttaatt 6938883  T
Q  220 atcagcttatagcataaacgcttatcatataagggcttatacattatgtacaagtcgataaaataaagtcaaattggtttcaatataaatagactattag 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6938882 atcagcttatagcataaacgcttatcatataagggcttatacattatgtacaagtcgataaaataaagtcaaatttgtttcaatataaatagactattag 6938783  T
Q  320 ttttttagtaagctgttctcaagagtttaatgatataagctgaaaataactataagttgtttccataagcacccccacaattgcactagtgcttatgcta 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6938782 ttttttagtaagctgttctcaagagtttaatgatataagctgaaaataattataagttgtttccataagcacccccacaattgcactagtgcttatgcta 6938683  T
Q  420 gtagataagctcaaataacctaatccaaacaggccgcttatatcaatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctca 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    ||||||| |||||    
T  6938682 gtagataagctcaaataacctaatccaaacaggccgcttatatcaatgagctgaagacaacttatgg--------------------ataagctttctca 6938603  T
Q  520 aatagacttaaaagtgcttatgttattgttagaacaacaaccgatatacaagtataagnnnnnnnnnnnnttgaaagacaatgagacacagttttgtt 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  6938602 aatagacttaaaagtgcttatgttattgttagaacaacaaccgatatacaagtataagaaaaaacaaaaattgaaagacaatgagacacagttttgtt 6938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 521
Target Start/End: Complemental strand, 37611239 - 37611188
Alignment:
Q  470 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||| ||| |||||| |||| ||||||||||||||||||||||||||||||    
T  37611239 ctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 521
Target Start/End: Complemental strand, 37787969 - 37787918
Alignment:
Q  470 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||| ||| |||||| |||| ||||||||||||||||||||||||||||||    
T  37787969 ctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37787918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 5531086 - 5531124
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctc 514  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5531086 acaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 7097343 - 7097397
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    ||||||| ||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  7097343 tgtttggctaaacagcttaattatatgcttatagcataaatgcttatcatataag 7097397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 16937841 - 16937800
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacagg 452  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  16937841 cttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 524
Target Start/End: Original strand, 8089980 - 8090036
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 524  Q
    ||||||| ||| |||| | | |||||| |||||||||||||||||||||||||||||    
T  8089980 agctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaatag 8090036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 26516180 - 26516240
Alignment:
Q  199 gtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    |||||||||||||  |||||||   ||||||||||||| ||||||||||||||| ||||||    
T  26516180 gtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttat 26516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 541
Target Start/End: Original strand, 10152388 - 10152451
Alignment:
Q  478 aacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 541  Q
    ||||||||||||| ||| |||||||||||||||||||||  |||||| || | | |||||||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaatagtctcacatgtgcttatg 10152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 14295550 - 14295601
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctca 519  Q
    ||||||| ||| ||||| ||||||||| ||| ||||||||||||||||||||    
T  14295550 agctgaaaacagcttatcgacatatcataagctgttttcataagctctctca 14295601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 30585764 - 30585811
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||| |||||||||||| ||||||||| ||||||| ||||||    
T  30585764 agtgcttatgttagtagataagcacaaataaccaaatccaatcaggcc 30585811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 42034168 - 42034215
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  42034168 agtgcttatgtcagtaggtaagctcaaataagctaatccaaacaggcc 42034215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 6738596 - 6738542
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||||| |||||| |||||||||  || ||||||||||||| |||||||||||||    
T  6738596 tgtttgcataaaccgtttaattaagagtttatagcataaacacttatcatataag 6738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 13244670 - 13244616
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    ||||||||||||||||| ||||    | |||||||||||||||||||||||||||    
T  13244670 tgtttggataaacagttaaattgagcgtttatagcataaacgcttatcatataag 13244616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 25705621 - 25705575
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    |||||||||| ||||||||||| ||||||||  ||||||||||||||    
T  25705621 agtgcttatgttagtagataagttcaaataatttaatccaaacaggc 25705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 41052769 - 41052819
Alignment:
Q  196 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatca 246  Q
    |||||||||||||||| ||||||||   |||| ||||||||||||||||||    
T  41052769 cttgtttggataaacaatttaattaagtgcttgtagcataaacgcttatca 41052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 10771850 - 10771809
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaa 448  Q
    ||||||||||| ||||||||||||||||||| | ||||||||    
T  10771850 agtgcttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 25720379 - 25720334
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 452  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||||||||    
T  25720379 agtgcttatgccagtagataacctcaaataagctaattcaaacagg 25720334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 26004959 - 26004914
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 452  Q
    |||||||||||||||||||||||| ||||||   ||||||||||||    
T  26004959 agtgcttatgctagtagataagctaaaataagtcaatccaaacagg 26004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 26516459 - 26516500
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctct 517  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    
T  26516459 acaactaatggacatatcataagctgttttcataagctctct 26516500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 29115402 - 29115341
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    |||||||||||||| ||||||||   |||||||||||||||  |||||||| ||| ||||||    
T  29115402 tgtttggataaacactttaattacgcgcttatagcataaacatttatcataaaagtgcttat 29115341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 29363055 - 29363100
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    |||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  29363055 tgaaaacaacttatgggcatgtcataagttgttttcataagctctc 29363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 6109527 - 6109575
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| ||||||||||||||||||| || || ||| |||||||||||    
T  6109527 agctgaaaacaacttatggacatatcataatttttttccataagctctc 6109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 11153408 - 11153364
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||| ||||||||||||||||||||||| || | |||||||||||    
T  11153408 agtgtttatgctagtagataagctcaaacaagccaatccaaacag 11153364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 17258845 - 17258797
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataa-cctaatccaaacaggcc 454  Q
    |||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  17258845 agtgcttatgttagttgataagctcaaataagccaaatccaaacaggcc 17258797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 34690925 - 34690965
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  34690925 acaacttatggacatgtcacaatttgtttttataagctctc 34690965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 542
Target Start/End: Original strand, 2996629 - 2996691
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || || ||||||||||||||    
T  2996629 cttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgt 2996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 523
Target Start/End: Complemental strand, 33534195 - 33534140
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaata 523  Q
    ||||||| |||||||||||| || |||||| |||||||||||||||||||||||||    
T  33534195 agctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaata 33534140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 30585659 - 30585700
Alignment:
Q  406 tagtgcttatgctagtagataagctcaaataacctaatccaa 447  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  30585659 tagtgcttatgcaagtagataagctcaaataaactaatccaa 30585700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 47771876 - 47771937
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    ||||||||||||||| ||| ||   |||||||||||||| ||||||||||||||| ||||||    
T  47771876 tgtttggataaacagcttattttggagcttatagcataagcgcttatcatataagcgcttat 47771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 521
Target Start/End: Original strand, 6428071 - 6428115
Alignment:
Q  477 caacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  6428071 caacttatggacatgtcataagttgttttcataatctctctcaaa 6428115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 35571589 - 35571549
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  35571589 cttatgctagtagataagctcaaataagccaatccaaacag 35571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 38478818 - 38478866
Alignment:
Q  405 ctagtgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||||||||| |||||||| |||||||||| | |||||||||||||    
T  38478818 ctagtgcttatgccagtagatatgctcaaataagccaatccaaacaggc 38478866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 454
Target Start/End: Complemental strand, 45104359 - 45104311
Alignment:
Q  406 tagtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  45104359 tagtgcttatgccaatagatatgctcaaataagctaatccaaacaggcc 45104311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 454
Target Start/End: Original strand, 18815135 - 18815178
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||    
T  18815135 cttatgctagtaggtaagctcaaataagccaatccaaacaggcc 18815178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 33640989 - 33641048
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggctt 257  Q
    ||||||||||||||| |||||||   |||||||| |||| ||||||||||||||| ||||    
T  33640989 tgtttggataaacagcttaattaagtgcttatagaataatcgcttatcatataagtgctt 33641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 17823017 - 17823071
Alignment:
Q  196 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatata 250  Q
    ||||||||||||||||| ||||||  ||||| |||||||||  ||||||||||||    
T  17823017 cttgtttggataaacagcttaatttgcagctcatagcataagggcttatcatata 17823071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 54426155 - 54426197
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||| ||||||||||||||||||| | |||||||||||||    
T  54426155 cttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 454
Target Start/End: Original strand, 23319965 - 23320006
Alignment:
Q  413 tatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||||||| ||||||||| | ||||||||||||||    
T  23319965 tatgctagtagataatctcaaataagccaatccaaacaggcc 23320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 454
Target Start/End: Complemental strand, 26824 - 26780
Alignment:
Q  410 gcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||| ||| ||||||||||||||| | ||||||||||||||    
T  26824 gcttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 540
Target Start/End: Original strand, 4071922 - 4071994
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 540  Q
    ||||||| ||||||||   ||| |||| ||| |||||||||||||||||||||| || || | ||||||||||    
T  4071922 agctgaaaacaacttaccaacaaatcataagctgttttcataagctctctcaaacagtctcacaagtgcttat 4071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 4243221 - 4243281
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttat-agcataaacgcttatcatataagggctt 257  Q
    ||||||||||||||| |||||||   |||||| ||||||| ||||||||||||||| ||||    
T  4243221 tgtttggataaacagcttaattaagtgcttattagcataagcgcttatcatataagtgctt 4243281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 24193465 - 24193520
Alignment:
Q  197 ttgtttggataaacagtttaatt-atcagcttatagcataaacgcttatcatataag 252  Q
    |||||||||||||||  |||||| | || ||||||||||||||||||||||||||||    
T  24193465 ttgtttggataaacaacttaattgagca-cttatagcataaacgcttatcatataag 24193520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 27970043 - 27970071
Alignment:
Q  150 tattttcatataagttataacttgttttc 178  Q
    |||||||||||||||||||||||||||||    
T  27970043 tattttcatataagttataacttgttttc 27970071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 39886763 - 39886715
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatca 246  Q
    ||||||||||||||  ||| ||  |||||||||||||||||||||||||    
T  39886763 tgtttggataaacaaattattttgcagcttatagcataaacgcttatca 39886715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 524
Target Start/End: Original strand, 52428737 - 52428765
Alignment:
Q  496 aagttgttttcataagctctctcaaatag 524  Q
    |||||||||||||||||||||||||||||    
T  52428737 aagttgttttcataagctctctcaaatag 52428765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 540
Target Start/End: Original strand, 53315382 - 53315442
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 540  Q
    ||||||||||| | | | ||||||||||||||||||| ||||||| |||| | ||||||||    
T  53315382 cttatggacatgtgatatgttgttttcataagctctcacaaatagtcttatatgtgcttat 53315442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 521
Target Start/End: Original strand, 24281094 - 24281144
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  24281094 tgaaaacaacttatggagatatcataagttgttttcataagctctctcaaa 24281144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 19679290 - 19679243
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  19679290 agtgcttatgctagtagataaactcaaataacccaatccaaataggcc 19679243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 34707519 - 34707469
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||| ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  34707519 tgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaa 34707469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 540
Target Start/End: Original strand, 34382989 - 34383058
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 540  Q
    |||| ||||||||| ||||||||| ||  ||||| |||||||| ||||||| ||||||||||||| ||||    
T  34382989 tgaaaacaacttatagacatatcataatctgtttccataagctatctcaaacagacttaaaagtgtttat 34383058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 544
Target Start/End: Original strand, 1810029 - 1810097
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgtta 544  Q
    |||||| |||||||| ||| ||||||||| | ||||||||||||||||| || | ||||| ||||||||    
T  1810029 acaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatgtta 1810097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 544
Target Start/End: Original strand, 50211807 - 50211855
Alignment:
Q  496 aagttgttttcataagctctctcaaatagacttaaaagtgcttatgtta 544  Q
    |||||||||||||||| ||||||||| || |||| ||||||||||||||    
T  50211807 aagttgttttcataagttctctcaaacagtcttacaagtgcttatgtta 50211855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 44014760 - 44014713
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  44014760 agtgtttatgctagtagataaactcaaataagccaatccaaacaggcc 44014713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 521
Target Start/End: Original strand, 37273181 - 37273231
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||    
T  37273181 tgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaa 37273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 53762351 - 53762309
Alignment:
Q  412 ttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||||||||||||||||||| | ||||||| ||||||    
T  53762351 ttatgctagtagataagctcaaataaaccaatccaagcaggcc 53762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 521
Target Start/End: Complemental strand, 25183001 - 25182960
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||||| || ||| ||||||||||||||||||||||||||    
T  25183001 cttatggatatgtcataagttgttttcataagctctctcaaa 25182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 444
Target Start/End: Complemental strand, 27795975 - 27795938
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatc 444  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  27795975 agtgcttatgccagtagataagctcaaataagctaatc 27795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 40240783 - 40240738
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 452  Q
    |||| ||||||||||| ||||||||||||||  |||||||||||||    
T  40240783 agtgtttatgctagtatataagctcaaataagttaatccaaacagg 40240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 40880966 - 40880921
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||||| || ||| ||| ||||||||||||||||||||||||||    
T  40880966 acaacttacggtcatgtcataagttgttttcataagctctctcaaa 40880921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 42817248 - 42817195
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||||| ||||||||||||||| ||| | | ||||| ||||||||||||||||    
T  42817248 agctgaaaacaacttatggacatgtcatatgctgtttccataagctctctcaaa 42817195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 542
Target Start/End: Original strand, 47584523 - 47584568
Alignment:
Q  497 agttgttttcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    |||| ||||||||||||||||||||||| || | ||||||||||||    
T  47584523 agttcttttcataagctctctcaaatagtctcacaagtgcttatgt 47584568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 2175856 - 2175804
Alignment:
Q  487 acatatcacaagttgttttcataagctctctcaaatagacttaaaagtgctta 539  Q
    |||| ||| ||||||||||||||| || |||||||||| |||| |||||||||    
T  2175856 acatgtcataagttgttttcataaactatctcaaatagtcttacaagtgctta 2175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 541
Target Start/End: Complemental strand, 2413672 - 2413632
Alignment:
Q  501 gttttcataagctctctcaaatagacttaaaagtgcttatg 541  Q
    ||||||||||||||||||||| ||||||| ||||| |||||    
T  2413672 gttttcataagctctctcaaacagacttacaagtgattatg 2413632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 3015866 - 3015822
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctct 515  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  3015866 tgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 25459592 - 25459548
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    ||||||||||||||| |||||||||||||||   |||||||||||    
T  25459592 agtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 451
Target Start/End: Original strand, 39980841 - 39980881
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  39980841 cttatgctagtagataagctcaaacaagccaatccaaacag 39980881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 49605809 - 49605769
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||| |||||| ||||||||| |||||||||||||    
T  49605809 cttatgctagaagataaactcaaataaactaatccaaacag 49605769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 542
Target Start/End: Original strand, 37474817 - 37474883
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| || || | ||||| ||||||    
T  37474817 acaactaatggacatatcacaagtagttttcataagctctctcaaagagtctcataagtgtttatgt 37474883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 41702375 - 41702326
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcat 247  Q
    ||||||||||||||| |||||| ||||||||||||| |||| ||||||||    
T  41702375 tgtttggataaacagcttaattttcagcttatagcaaaaacacttatcat 41702326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 30990401 - 30990357
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||| |||||||||||||||||||| | |||||||||||    
T  30990401 agtgcttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 33503108 - 33503152
Alignment:
Q  409 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||    
T  33503108 tgcttatgctagtagataagctcaaataagccaatacaaacaggc 33503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 43065476 - 43065428
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| |||| |||||||||| ||| |||||||||||||||||||||    
T  43065476 agctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 450
Target Start/End: Original strand, 11514004 - 11514047
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaaca 450  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||    
T  11514004 agtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 450
Target Start/End: Original strand, 43259943 - 43259986
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaaca 450  Q
    |||||||||||||||||||||| |||||||| | ||||||||||    
T  43259943 agtgcttatgctagtagataagttcaaataagccaatccaaaca 43259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 44606136 - 44606093
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataag 511  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  44606136 agctgaaaacaacttatggacatgtcataagttgttttcataag 44606093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 16398494 - 16398444
Alignment:
Q  471 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||||| ||||||||||| ||| |||||||||||||| | |||||||||    
T  16398494 tgaagacagcttatggacatgtcataagttgttttcatatgttctctcaaa 16398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 4550658 - 4550719
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    ||||||||||||||  ||||||| || |||||||||||| | ||||||| ||||| ||||||    
T  4550658 tgtttggataaacaacttaattaacaacttatagcataatctcttatcacataagtgcttat 4550719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 454
Target Start/End: Complemental strand, 15370283 - 15370238
Alignment:
Q  409 tgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||| |||||||||||||||||||   ||||||||||||||    
T  15370283 tgcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 42974231 - 42974284
Alignment:
Q  196 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatat 249  Q
    ||||||||||||| ||  |||||||  |||||||||||||||| ||||||||||    
T  42974231 cttgtttggataagcaacttaattaagagcttatagcataaacacttatcatat 42974284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 1494459 - 1494419
Alignment:
Q  481 ttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  1494459 ttatggacatgtcataagctgttttcataagctctctcaaa 1494419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 451
Target Start/End: Original strand, 33942010 - 33942058
Alignment:
Q  403 cactagtgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    ||||||| ||||||| ||||||||| ||||||||| | |||||||||||    
T  33942010 cactagtacttatgccagtagataacctcaaataagccaatccaaacag 33942058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 39567784 - 39567832
Alignment:
Q  199 gtttggataaacagtttaattatcagcttatagcataaacgcttatcat 247  Q
    |||||||||||||| ||||||  |||||||| |||||| ||||||||||    
T  39567784 gtttggataaacagcttaattcacagcttattgcataagcgcttatcat 39567832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 541
Target Start/End: Complemental strand, 1669828 - 1669751
Alignment:
Q  464 aatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 541  Q
    ||||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||| ||| ||| |||| |||||| ||||    
T  1669828 aatgagctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaattagtcttacaagtgcatatg 1669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 543
Target Start/End: Original strand, 9027622 - 9027697
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgtt 543  Q
    ||||||| ||||||||||||||| ||| ||||| ||| |||||||||| ||||| ||||||  | |||||||||||    
T  9027622 agctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacagacttgcacgtgcttatgtt 9027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 33828527 - 33828581
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||||||||||||||||||| ||   |||||||||||||||||||||||| ||||    
T  33828527 tgtttggataaacagtttaactaagtgcttatagcataaacgcttatcatttaag 33828581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 524
Target Start/End: Complemental strand, 10616580 - 10616511
Alignment:
Q  455 gcttatatcaatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 524  Q
    |||||||  ||| ||||||| |||||||| |||||| ||| ||||||||| ||||||||||| |||||||    
T  10616580 gcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaatag 10616511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 12111075 - 12111122
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||    
T  12111075 agtgcttatgctagtagataagctcaaataagtcaatccaaataggcc 12111122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 515
Target Start/End: Original strand, 30863290 - 30863337
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctct 515  Q
    ||||||| |||||||||| |||| ||| ||||||||||||||||||||    
T  30863290 agctgaaaacaacttatgtacatgtcataagttgttttcataagctct 30863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 2767830 - 2767796
Alignment:
Q  225 cttatagcataaacgcttatcatataagggcttat 259  Q
    |||||||||||||||||| ||||||||||||||||    
T  2767830 cttatagcataaacgcttctcatataagggcttat 2767796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 2785858 - 2785796
Alignment:
Q  197 ttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    |||||||||||||||  |||||||   ||||||||||||||||||| ||||||| | ||||||    
T  2785858 ttgtttggataaacaacttaattaatcgcttatagcataaacgcttgtcatatatgtgcttat 2785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 32861650 - 32861696
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||||| ||||||||||||||||||||| | |||||||| ||||    
T  32861650 agtgcttattctagtagataagctcaaataagcaaatccaaaaaggc 32861696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 542
Target Start/End: Complemental strand, 2167184 - 2167108
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  2167184 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 2167108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 542
Target Start/End: Complemental strand, 2178817 - 2178741
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  2178817 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 2178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 9027458 - 9027519
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 259  Q
    |||||||||||||||||||| ||   ||||||||||| ||| ||||| ||||||| ||||||    
T  9027458 tgtttggataaacagtttaagtaagcgcttatagcatgaacacttattatataagtgcttat 9027519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 521
Target Start/End: Original strand, 31338032 - 31338073
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||    
T  31338032 cttatggacatgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Original strand, 31338086 - 31338115
Alignment:
Q  408 gtgcttatgctagtagataagctcaaataa 437  Q
    ||||||||||||||||||||||||||||||    
T  31338086 gtgcttatgctagtagataagctcaaataa 31338115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 32578012 - 32577959
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||||| ||| || | |||||| ||| ||||||||||||||||||||||||||    
T  32578012 agctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 521
Target Start/End: Original strand, 34939557 - 34939610
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||||| |||||||| |||| | ||| ||||||||| ||||||||||||||||    
T  34939557 agctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 835219 - 835179
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  835219 cttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 6654501 - 6654557
Alignment:
Q  204 gataaacagtttaattatcagcttatagcataaacgcttatc-atataagggcttat 259  Q
    ||||| ||| ||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  6654501 gataaccagcttaatttgcagcttatagcattaacgcttatcaatataagggcttat 6654557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 7490291 - 7490251
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||| |||||||||||||||||||||| |||||| ||||||    
T  7490291 cttaagctagtagataagctcaaataaactaatcaaaacag 7490251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 14340998 - 14340938
Alignment:
Q  192 tgaacttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    ||||| ||||||||||||||  |||||||   ||||||| ||||||| |||||||||||||    
T  14340998 tgaacatgtttggataaacaacttaattaagtgcttataacataaacacttatcatataag 14340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 19752813 - 19752761
Alignment:
Q  487 acatatcacaagttgttttcataagctctctcaaatagacttaaaagtgctta 539  Q
    |||||||| | |||||||| |||||||||||||||||| || | |||||||||    
T  19752813 acatatcatacgttgtttttataagctctctcaaatagtctcacaagtgctta 19752761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 516
Target Start/End: Complemental strand, 20377938 - 20377898
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  20377938 acaacttatagacatgtcataagttgttttcataagctctc 20377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 2832080 - 2832120
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaa 447  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  2832080 agtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 524
Target Start/End: Original strand, 6262790 - 6262838
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctctcaaatag 524  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  6262790 acaacttatggacatatcataagttattttcataagctctcccaaatag 6262838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 541
Target Start/End: Original strand, 6659720 - 6659797
Alignment:
Q  464 aatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 541  Q
    ||||||||||| |||||||||||||||  || | |||||| ||||||||| || ||||||| || | |||||||||||    
T  6659720 aatgagctgaaaacaacttatggacatgccaaatgttgttatcataagctatcccaaatagtctcacaagtgcttatg 6659797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 24263326 - 24263274
Alignment:
Q  200 tttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||||||||||||||||||||   |||||||||||||||| ||| ||||||||    
T  24263326 tttggataaacagtttaattaagtgcttatagcataaacgtttagcatataag 24263274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 32515403 - 32515356
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||| |||||||||| ||||||||  ||||||||||||||||    
T  32515403 agtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 454
Target Start/End: Original strand, 38247439 - 38247482
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||    
T  38247439 cttatgccagtagataagttcaaataacccaatccaaacaggcc 38247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 542
Target Start/End: Original strand, 27140522 - 27140596
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||| ||||||||||||||| ||| ||| ||||| | ||| |||||||||| ||||||| || || ||||||    
T  27140522 agctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttacaattgtttatgt 27140596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 48133128 - 48133074
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||||||||| |||  |||||||   |||||||||||||||||||||||||||||    
T  48133128 tgtttggatagacaacttaattaagcgcttatagcataaacgcttatcatataag 48133074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 451
Target Start/End: Complemental strand, 51957356 - 51957314
Alignment:
Q  409 tgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||||||||||||| |||||||| ||||| |||||||    
T  51957356 tgcttatgctagtagataagttcaaataagctaatacaaacag 51957314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 10744188 - 10744237
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcat 247  Q
    |||||| |||||||  |||||| |||||||||||||||| ||||||||||    
T  10744188 tgtttgtataaacaacttaattctcagcttatagcataagcgcttatcat 10744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 38867849 - 38867804
Alignment:
Q  476 acaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    |||||| |||||||||||| ||||| ||| ||||||||||||||||    
T  38867849 acaactgatggacatatcataagttatttccataagctctctcaaa 38867804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 504
Target Start/End: Complemental strand, 15064861 - 15064825
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttt 504  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  15064861 agctgaaaacaacttatggacatatcataagttgttt 15064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 19389808 - 19389836
Alignment:
Q  223 agcttatagcataaacgcttatcatataa 251  Q
    |||||||||||||||||||||||||||||    
T  19389808 agcttatagcataaacgcttatcatataa 19389836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 38170716 - 38170668
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| |||||||||| |||| ||| ||| |||||||||||||||||    
T  38170716 agctgaaaacaacttatgaacatgtcataagctgttttcataagctctc 38170668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 9700109 - 9700156
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  9700109 agtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 9700156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 31884902 - 31884855
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  31884902 agtgcttatgctagtagataagctcaaataacgcaatccaagcaggcc 31884855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 2482742 - 2482796
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    ||||||||||||||| ||||||   |||||||||||||||| |||||||||||||    
T  2482742 tgtttggataaacagcttaatttgaagcttatagcataaacacttatcatataag 2482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 524
Target Start/End: Original strand, 30259160 - 30259214
Alignment:
Q  470 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 524  Q
    ||||| ||||||||| ||||||||| ||| ||||| |||||||||||||||||||    
T  30259160 ctgaaaacaacttatagacatatcataagctgtttccataagctctctcaaatag 30259214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 12833260 - 12833313
Alignment:
Q  199 gtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||| ||||||||||||||||  |||||||||||||||  ||||||||||||||    
T  12833260 gttttgataaacagtttaattcacagcttatagcataagggcttatcatataag 12833313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 521
Target Start/End: Original strand, 30918157 - 30918209
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 521  Q
    ||||||| |||||||||| | || ||||||||||||||||||||||||||||||    
T  30918157 agctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaa 30918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 31891922 - 31891966
Alignment:
Q  410 gcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||||||||||| |||||||||  |||||||||||||||    
T  31891922 gcttatgctagtagataaactcaaataaattaatccaaacaggcc 31891966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 6950216 - 6950271
Alignment:
Q  197 ttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    |||||| ||||||||  |||||||   |||||||||||||||||||||||||||||    
T  6950216 ttgtttagataaacaacttaattaagtgcttatagcataaacgcttatcatataag 6950271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 9130277 - 9130238
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaaca 450  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  9130277 cttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 16162868 - 16162915
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  16162868 agtgtttatgctagtagataaactcaaataagccaatccaaacaggcc 16162915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 527
Target Start/End: Complemental strand, 30988005 - 30987958
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctctcaaatagact 527  Q
    ||||||||||| ||| ||||||||| |||||||||||||||| |||||    
T  30988005 cttatggacatgtcataagttgtttccataagctctctcaaacagact 30987958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 41442622 - 41442576
Alignment:
Q  201 ttggataaacagtttaattatcagcttatagcataaacgcttatcat 247  Q
    |||||||||||| |||||| | |||||||||||||||| ||||||||    
T  41442622 ttggataaacagcttaatttttagcttatagcataaacacttatcat 41442576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 43045683 - 43045641
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    |||||||||||||||||||| |||||| | |||||||||||||    
T  43045683 cttatgctagtagataagcttaaataagccaatccaaacaggc 43045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 44236785 - 44236739
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||||||| ||||||||| |||||||||  ||||||||||||||    
T  44236785 agtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 517
Target Start/End: Original strand, 11183589 - 11183638
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctct 517  Q
    ||||||| ||| ||||| ||||||||| |||||||||| |||||||||||    
T  11183589 agctgaaaacagcttatagacatatcataagttgtttttataagctctct 11183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 28769365 - 28769292
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 541  Q
    ||||||| ||||||||||||||||||| | | | ||| || |||||||||||||||  || | |||||||||||    
T  28769365 agctgaaaacaacttatggacatatcatatgctatttacacaagctctctcaaataatctcacaagtgcttatg 28769292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 14949910 - 14949958
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| ||| ||||||||||| ||| ||||| |||||||||||||||    
T  14949910 agctgaaaacagcttatggacatgtcataagttattttcataagctctc 14949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 524
Target Start/End: Complemental strand, 27412880 - 27412852
Alignment:
Q  496 aagttgttttcataagctctctcaaatag 524  Q
    |||||||||||||||||||||||||||||    
T  27412880 aagttgttttcataagctctctcaaatag 27412852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 38874757 - 38874801
Alignment:
Q  409 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 453  Q
    ||||||||||| |||||||||||||||||   |||||||||||||    
T  38874757 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 38874801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 542
Target Start/End: Original strand, 33894671 - 33894745
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||| ||||||||||||||| ||| | | ||||||||||||||||| |||| || || | ||||||||||||    
T  33894671 agctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgt 33894745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 46082080 - 46082128
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  46082080 agctgaaaacaacttatggtcatgtcataagttgttttcataagctctc 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 6824815 - 6824858
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgct 241  Q
    ||||||||||||||||||||||  || |||||||||||||||||    
T  6824815 tgtttggataaacagtttaatttgcaccttatagcataaacgct 6824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 34672939 - 34672892
Alignment:
Q  198 tgtttggataaacagtttaattatcagcttatagcataaacgcttatc 245  Q
    ||||||||||||||| |||||| |||||||||||||||| | ||||||    
T  34672939 tgtttggataaacagcttaattttcagcttatagcataagcacttatc 34672892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 454
Target Start/End: Complemental strand, 40252081 - 40252038
Alignment:
Q  411 cttatgctagtagataagctcaaataacctaatccaaacaggcc 454  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||    
T  40252081 cttatgctagtagataagctcaaataagccaattcaaacaggcc 40252038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 437
Target Start/End: Original strand, 8094414 - 8094444
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataa 437  Q
    |||||||||||||||||||||||||||||||    
T  8094414 agtgcttatgctagtagataagctcaaataa 8094444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 32156891 - 32156937
Alignment:
Q  200 tttggataaacagtttaattatcagcttatagcataaacgcttatca 246  Q
    ||||||||||||  ||||||  |||||||||||||||||||||||||    
T  32156891 tttggataaacaacttaatttgcagcttatagcataaacgcttatca 32156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 449
Target Start/End: Complemental strand, 32791711 - 32791665
Alignment:
Q  403 cactagtgcttatgctagtagataagctcaaataacctaatccaaac 449  Q
    |||||||||||||||||||||||||||||  |||| | |||||||||    
T  32791711 cactagtgcttatgctagtagataagctctgataagccaatccaaac 32791665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 22204392 - 22204441
Alignment:
Q  199 gtttggataaacagtttaattatcagcttatagcataaacgcttatcata 248  Q
    ||||||||||||  |||||||||  |||||||||||||| ||||||||||    
T  22204392 gtttggataaactatttaattatatgcttatagcataaatgcttatcata 22204441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 22230347 - 22230298
Alignment:
Q  199 gtttggataaacagtttaattatcagcttatagcataaacgcttatcata 248  Q
    ||||||||||||  |||||||||  |||||||||||||| ||||||||||    
T  22230347 gtttggataaactatttaattatatgcttatagcataaatgcttatcata 22230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 24363562 - 24363517
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 452  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||    
T  24363562 agtgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 19624137 - 19624169
Alignment:
Q  228 atagcataaacgcttatcatataagggcttata 260  Q
    ||||||||||| |||||||||||||||||||||    
T  19624137 atagcataaacacttatcatataagggcttata 19624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 22759267 - 22759299
Alignment:
Q  405 ctagtgcttatgctagtagataagctcaaataa 437  Q
    ||||||||||||| |||||||||||||||||||    
T  22759267 ctagtgcttatgccagtagataagctcaaataa 22759299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 516
Target Start/End: Complemental strand, 28340434 - 28340398
Alignment:
Q  480 cttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  28340434 cttatggacatgtcataagttgttttcataagctctc 28340398  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 451
Target Start/End: Original strand, 29363616 - 29363660
Alignment:
Q  407 agtgcttatgctagtagataagctcaaataacctaatccaaacag 451  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||    
T  29363616 agtgcttatgttagtagataagttcaaataagccaatccaaacag 29363660  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 46945773 - 46945829
Alignment:
Q  196 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 252  Q
    ||||||||||||||||  ||| ||  ||||||||||| ||| |||||||||||||||    
T  46945773 cttgtttggataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 46945829  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 542
Target Start/End: Original strand, 3517 - 3593
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 542  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  3517 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 3593  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 12730 - 12682
Alignment:
Q  468 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 516  Q
    ||||||| ||||||||||||||| ||| ||||||||| |||||| ||||    
T  12730 agctgaaaacaacttatggacatgtcataagttgtttccataaggtctc 12682  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 454
Target Start/End: Complemental strand, 159924 - 159888
Alignment:
Q  418 tagtagataagctcaaataacctaatccaaacaggcc 454  Q
    |||||||||||||||||||| | ||||||||||||||    
T  159924 tagtagataagctcaaataagccaatccaaacaggcc 159888  T

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