View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3065-Insertion-6 (Length: 427)

Name: NF3065-Insertion-6
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3065-Insertion-6
NF3065-Insertion-6
[»] chr3 (20 HSPs)
chr3 (8-424)||(41423130-41423547)
chr3 (8-85)||(17030598-17030673)
chr3 (8-72)||(2985728-2985791)
chr3 (17-85)||(18359431-18359498)
chr3 (8-72)||(28298187-28298251)
chr3 (8-74)||(7060134-7060200)
chr3 (8-69)||(25124987-25125047)
chr3 (8-72)||(13041594-13041657)
chr3 (8-72)||(13049671-13049734)
chr3 (8-72)||(30226181-30226245)
chr3 (8-72)||(31293683-31293746)
chr3 (8-72)||(52839530-52839593)
chr3 (8-45)||(34314778-34314815)
chr3 (8-73)||(52962311-52962375)
chr3 (8-72)||(5572184-5572247)
chr3 (8-72)||(7272641-7272704)
chr3 (8-72)||(13439795-13439858)
chr3 (8-72)||(19111171-19111234)
chr3 (8-72)||(22817963-22818026)
chr3 (8-72)||(32721738-32721801)
[»] chr8 (25 HSPs)
chr8 (7-72)||(11311408-11311473)
chr8 (21-71)||(31343803-31343853)
chr8 (8-68)||(28786491-28786551)
chr8 (17-72)||(34227408-34227462)
chr8 (10-69)||(41168946-41169005)
chr8 (8-72)||(15568934-15568997)
chr8 (8-72)||(29346086-29346149)
chr8 (8-72)||(32684793-32684856)
chr8 (8-71)||(2873531-2873593)
chr8 (8-55)||(9235384-9235431)
chr8 (8-55)||(15935617-15935664)
chr8 (17-72)||(15959611-15959666)
chr8 (8-71)||(24375877-24375940)
chr8 (17-72)||(37545131-37545185)
chr8 (8-72)||(5566714-5566777)
chr8 (8-72)||(9305637-9305700)
chr8 (8-72)||(13572621-13572684)
chr8 (8-72)||(23389100-23389163)
chr8 (8-72)||(24331559-24331622)
chr8 (7-55)||(24528836-24528884)
chr8 (8-72)||(29211951-29212014)
chr8 (8-72)||(30872626-30872689)
chr8 (8-72)||(31974921-31974984)
chr8 (8-72)||(38703828-38703891)
chr8 (8-72)||(41509612-41509675)
[»] chr4 (27 HSPs)
chr4 (8-71)||(9780518-9780581)
chr4 (8-72)||(18165120-18165183)
chr4 (8-72)||(29104241-29104305)
chr4 (17-69)||(38926067-38926119)
chr4 (8-69)||(21744814-21744875)
chr4 (16-85)||(23298249-23298318)
chr4 (8-85)||(49277851-49277927)
chr4 (8-72)||(3652352-3652415)
chr4 (8-64)||(5931727-5931783)
chr4 (8-72)||(25244590-25244653)
chr4 (8-84)||(29172725-29172800)
chr4 (8-72)||(30918999-30919062)
chr4 (8-72)||(31856975-31857038)
chr4 (8-72)||(32681928-32681991)
chr4 (8-72)||(32682402-32682465)
chr4 (8-72)||(42056060-42056123)
chr4 (8-55)||(2032646-2032693)
chr4 (8-55)||(46088145-46088192)
chr4 (8-72)||(7913343-7913406)
chr4 (8-72)||(14121477-14121540)
chr4 (32-72)||(17251499-17251539)
chr4 (8-72)||(17696295-17696358)
chr4 (8-72)||(18510064-18510127)
chr4 (8-72)||(21507907-21507970)
chr4 (8-72)||(22854045-22854108)
chr4 (8-72)||(49296232-49296295)
chr4 (8-72)||(50773370-50773433)
[»] chr2 (29 HSPs)
chr2 (18-85)||(30602573-30602639)
chr2 (18-83)||(32928695-32928759)
chr2 (8-72)||(15580598-15580662)
chr2 (8-72)||(18756580-18756643)
chr2 (8-72)||(29878910-29878974)
chr2 (8-72)||(30497232-30497295)
chr2 (8-85)||(16590517-16590593)
chr2 (8-85)||(35791064-35791140)
chr2 (33-74)||(36795233-36795274)
chr2 (8-72)||(874435-874498)
chr2 (8-72)||(29096828-29096891)
chr2 (8-72)||(29949637-29949700)
chr2 (8-72)||(36525357-36525420)
chr2 (8-72)||(38127844-38127907)
chr2 (33-72)||(2526604-2526643)
chr2 (33-72)||(29097000-29097039)
chr2 (8-71)||(41906073-41906135)
chr2 (8-69)||(19272746-19272806)
chr2 (8-85)||(31989423-31989499)
chr2 (8-72)||(1975713-1975776)
chr2 (8-72)||(2526433-2526496)
chr2 (36-72)||(7007856-7007892)
chr2 (8-72)||(7008004-7008067)
chr2 (8-72)||(7318173-7318236)
chr2 (8-72)||(16138911-16138975)
chr2 (8-72)||(17886646-17886709)
chr2 (8-72)||(18048898-18048961)
chr2 (8-72)||(42794093-42794156)
chr2 (8-72)||(43830733-43830796)
[»] chr5 (25 HSPs)
chr5 (10-84)||(40995308-40995381)
chr5 (11-72)||(23108867-23108927)
chr5 (8-72)||(31312684-31312747)
chr5 (8-50)||(21125183-21125225)
chr5 (8-72)||(8855479-8855542)
chr5 (8-72)||(11721347-11721410)
chr5 (8-72)||(12148139-12148202)
chr5 (8-48)||(17190792-17190832)
chr5 (17-72)||(4414008-4414062)
chr5 (17-72)||(7577932-7577986)
chr5 (8-55)||(8861437-8861484)
chr5 (8-71)||(18231990-18232053)
chr5 (8-71)||(20355097-20355159)
chr5 (11-69)||(6527402-6527460)
chr5 (7-69)||(23159551-23159612)
chr5 (8-50)||(34309541-34309583)
chr5 (7-72)||(43287758-43287823)
chr5 (8-72)||(21039946-21040009)
chr5 (8-72)||(22756295-22756358)
chr5 (8-72)||(25233857-25233920)
chr5 (8-72)||(25298017-25298080)
chr5 (8-72)||(30916564-30916627)
chr5 (8-72)||(31567714-31567777)
chr5 (8-72)||(31920141-31920204)
chr5 (8-72)||(41123375-41123438)
[»] chr7 (31 HSPs)
chr7 (8-69)||(45687812-45687873)
chr7 (8-72)||(8391044-8391107)
chr7 (8-71)||(1853184-1853246)
chr7 (8-71)||(2936310-2936373)
chr7 (8-74)||(13263948-13264013)
chr7 (8-72)||(2300903-2300966)
chr7 (8-72)||(2514143-2514206)
chr7 (8-72)||(5864676-5864739)
chr7 (8-72)||(17051897-17051961)
chr7 (8-72)||(26254788-26254851)
chr7 (25-85)||(27082734-27082793)
chr7 (25-85)||(27195508-27195567)
chr7 (8-72)||(31307932-31307995)
chr7 (8-72)||(33441095-33441158)
chr7 (17-69)||(40938200-40938251)
chr7 (10-85)||(21074385-21074458)
chr7 (8-50)||(32199992-32200034)
chr7 (8-50)||(34258337-34258379)
chr7 (8-72)||(442616-442679)
chr7 (8-72)||(3401883-3401946)
chr7 (8-72)||(11576801-11576864)
chr7 (8-72)||(14187824-14187887)
chr7 (8-68)||(17155693-17155752)
chr7 (8-72)||(18828681-18828744)
chr7 (8-72)||(20055051-20055114)
chr7 (8-72)||(21522000-21522063)
chr7 (8-72)||(30632079-30632142)
chr7 (8-72)||(31749401-31749464)
chr7 (8-72)||(31863941-31864004)
chr7 (8-72)||(32946367-32946430)
chr7 (8-72)||(35158264-35158327)
[»] chr1 (12 HSPs)
chr1 (8-72)||(13436931-13436994)
chr1 (8-71)||(44228357-44228420)
chr1 (8-85)||(33864120-33864196)
chr1 (8-85)||(33916726-33916802)
chr1 (8-72)||(14909989-14910052)
chr1 (8-72)||(22387406-22387469)
chr1 (8-72)||(26190812-26190875)
chr1 (8-72)||(5932043-5932106)
chr1 (8-72)||(9209656-9209719)
chr1 (8-72)||(23161907-23161970)
chr1 (8-72)||(26399087-26399150)
chr1 (8-72)||(41189918-41189981)
[»] chr6 (7 HSPs)
chr6 (8-74)||(25166931-25166997)
chr6 (8-72)||(9222558-9222621)
chr6 (8-72)||(12292944-12293007)
chr6 (17-72)||(2270534-2270588)
chr6 (17-74)||(32603724-32603779)
chr6 (8-72)||(8237720-8237783)
chr6 (8-72)||(9676451-9676514)
[»] scaffold0010 (1 HSPs)
scaffold0010 (8-69)||(145121-145181)
[»] scaffold0004 (2 HSPs)
scaffold0004 (8-72)||(212594-212657)
scaffold0004 (8-50)||(82250-82292)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-72)||(332145-332208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-71)||(316515-316576)
[»] scaffold0430 (1 HSPs)
scaffold0430 (8-72)||(12714-12777)
[»] scaffold0258 (1 HSPs)
scaffold0258 (8-72)||(18831-18894)


Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 424
Target Start/End: Original strand, 41423130 - 41423547
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatctannnnnnn-caggggtaaacaag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  41423130 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatctattttttttcaggggtaaacaag 41423229  T
Q  107 aattcgctcaaatggcatagcgcgaatgtgcatttaattctattttctaacttcttgtttttactctgataaatctcctttaaaaaagaggatagagtaa 206  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41423230 aattcgctcaaatggcatagcgcgaaagtgcatttaatcctattttctaacttcttgtttttactctgataaatctcctttaaaaaagaggatagagtaa 41423329  T
Q  207 acgcaaagataggcagtctctctagtccttttggtaaattatagttaccgcttactgtcattatcacttcgaacaccttttccctctcttaattagtccc 306  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41423330 acgcaaagatagacagtctctctagtccttttggtaaattatagtttccgcttactgtcattatcacttcgaacaccttttccctctcttaattagtccc 41423429  T
Q  307 ctctgatttgcttactgctccttttctgattaacatctctaacgcagttgtgttttgaaaccgaagagaaagcgcggagacttctacaaaatgtgtcctc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41423430 ctctgatttgcttactgctccttttctgattaacatctctaacgcagttgtgttttgaaaccgaagagaaagcgcggagacttctacaaaatgtgtcatc 41423529  T
Q  407 tctactgaagccaggggg 424  Q
    ||||||||||||||||||    
T  41423530 tctactgaagccaggggg 41423547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 17030673 - 17030598
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||  |||||||||||||||| |||||||||||| |||| |||| |||||| ||||||| ||||||||||||||    
T  17030673 atatcattgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattac-aaggttggaatcta 17030598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 2985728 - 2985791
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| ||||||||||||||||| |||| || ||| |||||||||    
T  2985728 atatcatcgattttgtacagtcaaaattcatgaaggtctaaaaccaaa-aaacttcaaattacaa 2985791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 18359431 - 18359498
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    ||||| |||||||||| ||||||||||||||||  |||| |||||||||||||| ||||||| ||||||    
T  18359431 attttttacagtcaaaattcatgaaggtctaaatccaaagaatctttaaattac-aaggttgaaatcta 18359498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 28298187 - 28298251
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| ||||||||| |||||||  |||||||| | |||||||||    
T  28298187 atatcatcgattttgtacagtcaaaattcatgaagatctaaaactaaataatcatcaaattacaa 28298251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 7060200 - 7060134
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaag 74  Q
    |||||||||||||| |||| ||||| |||||| |||| ||||| ||||  |||||||||||||||||    
T  7060200 atatcatctattttatacaatcaaaattcatgtaggtttaaaatcaaaatatctttaaattacaaag 7060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 25124987 - 25125047
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| |||||| ||||||    
T  25124987 atatcatcgattttgtacagtcaaaattcatgaaggtcaaaaaccaaa-aatcttcaaatta 25125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 13041594 - 13041657
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  13041594 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 13041657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 13049671 - 13049734
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  13049671 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 13049734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30226245 - 30226181
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| ||||||||| |||||| ||||| ||| || |||| ||||||||||| |||||||||    
T  30226245 atatcatcaattttgtaccgtcaaaattcataaagatccaaaaccaaataatcttcaaattacaa 30226181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 31293683 - 31293746
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  31293683 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 31293746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 52839530 - 52839593
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  52839530 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 52839593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 34314815 - 34314778
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtc 45  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  34314815 atatcatcgattttgtacagtcaaaattcatgaaggtc 34314778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 52962375 - 52962311
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaa 73  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || ||||||||||    
T  52962375 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaat-ttcaaattacaaa 52962311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 5572184 - 5572247
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  5572184 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaatcaaa-aatcttcaaattacaa 5572247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 7272704 - 7272641
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||| | ||||||||| ||||||| |||| || ||| |||||||||    
T  7272704 atatcatcgattttgtacagtcacaattcatgaagatctaaaaccaaa-aaacttcaaattacaa 7272641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 13439795 - 13439858
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||| ||||| |||||||||||| |||| |||| |||||| |||||||||    
T  13439795 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 13439858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 19111171 - 19111234
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||| |||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  19111171 atatcttcgattttatacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 19111234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 22818026 - 22817963
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||| ||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  22818026 atatcttcgattttgtatagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 22817963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 32721738 - 32721801
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| || ||||||    
T  32721738 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttacaa 32721801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 11311408 - 11311473
Alignment:
Q  7 aatatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||||| ||||||| |||| ||| ||| |||| |||||||||||||||||||||    
T  11311408 aatatcatctattttgtatagtcaaaattcacgaacgtcaaaaatcaaataatctttaaattacaa 11311473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 31343803 - 31343853
Alignment:
Q  21 tgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  31343803 tgtacagtcaaaattcatgaaggtcaaaaaccaaataatctttaaattaca 31343853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 28786491 - 28786551
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatt 68  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| |||||| |||||    
T  28786491 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaatcaaagaatcttcaaatt 28786551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 34227462 - 34227408
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||    
T  34227462 attttgtacagtcaaaattcatgaaggtctaaaaccaaa-aatcttcaaattacaa 34227408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 41169005 - 41168946
Alignment:
Q  10 atcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||| |||||||| |||| ||||||||  ||||||||||| ||||||||||||||||||    
T  41169005 atcatatattttgtgcagttaaatttcacaaaggtctaaaatcaaataatctttaaatta 41168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15568934 - 15568997
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||| ||| ||||||||| || ||||||||||||||||||||| |||| |||||| |||||||||    
T  15568934 atattatcgattttgtactgttaaatttcatgaaggtctaaaaccaaa-aatcttcaaattacaa 15568997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29346149 - 29346086
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  29346149 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 29346086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 32684793 - 32684856
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  32684793 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 32684856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 2873593 - 2873531
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| ||||||||    
T  2873593 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattaca 2873531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 9235431 - 9235384
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    |||||||| |||||||||||||||| |||||||||||| |||| ||||    
T  9235431 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa 9235384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 15935617 - 15935664
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    ||||| || |||||||||||||||| ||||||||||||||||| ||||    
T  15935617 atatcttcaattttgtacagtcaaaattcatgaaggtctaaaaccaaa 15935664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 15959611 - 15959666
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||| |||| ||||||||| | |||||||||||| |||||||||| ||||||||||    
T  15959611 atttcgtacggtcaaattttacgaaggtctaaaaacaaataatctataaattacaa 15959666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24375877 - 24375940
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| ||||||||||||| || |||||||||||| ||||  ||| |||||| ||||||||    
T  24375877 atatcatcaattttgtacagtcgaaattcatgaaggtccaaaatgaaaaaatcttcaaattaca 24375940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 37545131 - 37545185
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  37545131 attttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 37545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 5566714 - 5566777
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| || | |||||| |||||||||    
T  5566714 atatcgtcgattttgtacagtcaaaattcatgaaggtccaaaaccaga-aatcttcaaattacaa 5566777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 9305637 - 9305700
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||  |||| |||| |||||| |||||||||    
T  9305637 atatcttcgattttgtacagtcaaaattcatgaaggttcaaaaccaaa-aatcttcaaattacaa 9305700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 13572684 - 13572621
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||| ||| |||||| |||||||||||| |||| |||| ||||||||||||||||    
T  13572684 atatcgtcgattttttactgtcaaaattcatgaaggtccaaaaccaaa-aatctttaaattacaa 13572621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 23389163 - 23389100
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| || ||||||||| |||| |||| |||||| |||||||||    
T  23389163 atatcttcgattttgtacagtcaaaatttatgaaggtccaaaaccaaa-aatcttcaaattacaa 23389100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 24331559 - 24331622
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||| ||||| |||||||||||| |||| |||| |||||| |||||||||    
T  24331559 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 24331622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 24528884 - 24528836
Alignment:
Q  7 aatatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    ||||||||| |||||||||||||||| ||||||||  ||||||| ||||    
T  24528884 aatatcatcgattttgtacagtcaaaattcatgaaaatctaaaaccaaa 24528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29212014 - 29211951
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||| ||||||||| ||||||| |||||||||||| |||| || | |||||| |||||||||    
T  29212014 atatcatatattttgtatagtcaaaattcatgaaggtccaaaaccaga-aatcttcaaattacaa 29211951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 30872626 - 30872689
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||| ||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  30872626 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 30872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 31974921 - 31974984
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||  |||| |||| ||||||| ||||||||    
T  31974921 atatcttcaattttgtacagtcaaaattcatgaaggttcaaaaccaaa-aatctttgaattacaa 31974984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 38703828 - 38703891
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||| ||| |||||||||||| |||| |||| |||||| |||||||||    
T  38703828 atatcttcgattttgtacagtaaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 38703891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 41509612 - 41509675
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||| ||||| |||||||||||| |||| |||| |||||| |||||||||    
T  41509612 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 41509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 9780518 - 9780581
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||| ||||||||    
T  9780518 atatcatcgattttctacagtcaaaattcatgaaggtccaaaaccaaataatcttcaaattaca 9780581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18165120 - 18165183
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||||||||| |||||||||||| |||| || | |||||| |||||||||    
T  18165120 atatcatctattttgtacagtcaaaattcatgaaggtccaaaaccaga-aatcttcaaattacaa 18165183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29104305 - 29104241
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||| ||| ||||||||||||||||| |||| |||||| |||||||||    
T  29104305 atatcttcgattttgtacagttaaaattcatgaaggtctaaaaccaaaaaatcttcaaattacaa 29104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 38926119 - 38926067
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||||||||||||||||||||||| ||| |||| |||| |||||||||||||    
T  38926119 attttgtacagtcaaatttcatgaatgtccaaaatcaaaaaatctttaaatta 38926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 21744875 - 21744814
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    |||||||| ||||||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  21744875 atatcatcgattttgtacggtcaaaattgaagaaggtccaaaaccaaataatctttaaatta 21744814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 23298249 - 23298318
Alignment:
Q  16 tattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    ||||||||| ||| |||||||   |||||||||||||||  |||| ||||| ||||||||||||||||||    
T  23298249 tattttgtatagttaaatttcgcaaaggtctaaaagcaacaaatcattaaactacaaaggttggaatcta 23298318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 49277851 - 49277927
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| ||||||||  |||||| || ||||||||  |||| ||||||||||| ||||||| ||||||||||||||    
T  49277851 atatcatcaattttgtatcgtcaaaatttatgaaggttcaaaaccaaataatcttcaaattac-aaggttggaatcta 49277927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 3652415 - 3652352
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  3652415 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 3652352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 5931727 - 5931783
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatcttta 64  Q
    |||||||||||||||||||||| |||||||  ||||||||||| |||| | ||||||    
T  5931727 atatcatctattttgtacagtccaatttcaccaaggtctaaaaacaaagagtcttta 5931783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25244590 - 25244653
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  25244590 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 25244653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 29172725 - 29172800
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatct 84  Q
    |||||||||||||||||||| ||||  ||| ||||||  |||| |||| |||||| ||||||| |||||||||||||    
T  29172725 atatcatctattttgtacagccaaaagtcacgaaggttcaaaaccaaagaatcttcaaattac-aaggttggaatct 29172800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30919062 - 30918999
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  30919062 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 30918999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31857038 - 31856975
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| ||||||||||||||||| || | |||||| |||||||||    
T  31857038 atatcttcaattttgtacagtcaaagttcatgaaggtctaaaaccaga-aatcttcaaattacaa 31856975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 32681928 - 32681991
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||    
T  32681928 atatcttcgattttgtactgtcaaaattcatgaaggtttaaaaccaaa-aatctttaaattacaa 32681991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 32682402 - 32682465
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  32682402 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 32682465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 42056123 - 42056060
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  42056123 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 42056060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 2032646 - 2032693
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    |||||||| |||||||||||||||| |||||||||||| |||| ||||    
T  2032646 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa 2032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 46088192 - 46088145
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    |||||||| |||||||||||||||| |||||||||||| |||| ||||    
T  46088192 atatcatcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaa 46088145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 7913343 - 7913406
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  7913343 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 7913406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 14121477 - 14121540
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||| ||| |||| |||| || ||| |||||||||    
T  14121477 atatcatcgattttgtacagtcaaaattcatgaaagtccaaaaccaaa-aaacttcaaattacaa 14121540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 17251499 - 17251539
Alignment:
Q  32 atttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||| |||| |||||| |||||||||    
T  17251499 atttcatgaaggtctaaaaccaaaaaatcttcaaattacaa 17251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 17696295 - 17696358
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  17696295 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 17696358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 18510127 - 18510064
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| || ||||||    
T  18510127 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttacaa 18510064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 21507970 - 21507907
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  21507970 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 21507907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 22854108 - 22854045
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  22854108 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 22854045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 49296232 - 49296295
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| || ||||||    
T  49296232 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttacaa 49296295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 50773433 - 50773370
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  50773433 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 50773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 30602573 - 30602639
Alignment:
Q  18 ttttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||||||   |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  30602573 ttttgtacagtttgatttcacgaaggtctaaaagcaaagaatctttaaattac-aaggttggaatcta 30602639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32928759 - 32928695
Alignment:
Q  18 ttttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatc 83  Q
    ||||||||||||||||   ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  32928759 ttttgtacagtcaaatgctatgaaggtctaaaagcaaagattctttaaattac-aaggttggaatc 32928695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15580598 - 15580662
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  15580598 atatcatcgattttgtacggtcaaaattcatgaaggtccaaaatcaaaaaatcttcaaattacaa 15580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18756580 - 18756643
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||    
T  18756580 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatctttaaattacaa 18756643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 29878910 - 29878974
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||| ||||| ||||| ||||||||||| |||| |||||| |||||||||    
T  29878910 atatcatcaattttgtacaatcaaaattcataaaggtctaaaaccaaagaatcttcaaattacaa 29878974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30497295 - 30497232
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| || | |||||| |||||||||    
T  30497295 atatcatctattttgtacattcaaaattcatgaaggtctaaaaccaga-aatcttcaaattacaa 30497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 16590593 - 16590517
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| |||||||||| ||||| |||||||||||  |||| |||| |||||| |||||||| | |||||||||||    
T  16590593 atatcatcgattttgtacaatcaaaattcatgaaggtgcaaaaccaaaaaatcttcaaattacaga-gttggaatcta 16590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 35791140 - 35791064
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| |||||||||||||||| |||||||||||| |||| || | ||| || ||||||| | ||||||||||||    
T  35791140 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaacagagaatattcaaattac-agggttggaatcta 35791064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 36795274 - 36795233
Alignment:
Q  33 tttcatgaaggtctaaaagcaaataatctttaaattacaaag 74  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  36795274 tttcatgaaggtctaaaaccaaaaaatctttaaattacaaag 36795233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 874498 - 874435
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| ||||||||||||||||| |||| ||| || |||||||||    
T  874498 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaaccaaa-aatattcaaattacaa 874435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29096891 - 29096828
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| |||| || ||| |||||||||    
T  29096891 atatcatctattttgtacaatcaaaattcatgaaggtccaaaatcaaa-aaacttcaaattacaa 29096828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29949700 - 29949637
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  29949700 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 29949637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 36525420 - 36525357
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  36525420 atatcatcaattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 36525357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 38127907 - 38127844
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  38127907 atatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 38127844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 2526604 - 2526643
Alignment:
Q  33 tttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  2526604 tttcatgaaggtctaaaaccaaaaaatctttaaattacaa 2526643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 29097000 - 29097039
Alignment:
Q  33 tttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  29097000 tttcatgaaggtctaaaaccaaaaaatctttaaattacaa 29097039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 41906135 - 41906073
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    ||||| || |||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||    
T  41906135 atatcgtcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaat-atcttcaaattaca 41906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 19272806 - 19272746
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||| || ||||| |||||||||| ||||||||||||||||| |||| |||||| ||||||    
T  19272806 atatcttcaattttttacagtcaaaattcatgaaggtctaaaaccaaa-aatcttcaaatta 19272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 31989499 - 31989423
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| ||||||||| |||| | |||||||||||| |||| |||| | |||| ||||||| |||| |||||||||    
T  31989499 atatcatcgattttgtacggtcataattcatgaaggtcgaaaaccaaagattcttcaaattac-aaggatggaatcta 31989423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 1975713 - 1975776
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  1975713 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 1975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 2526496 - 2526433
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||| ||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  2526496 atatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 2526433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 7007892 - 7007856
Alignment:
Q  36 catgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||||||| |||||| |||||||||    
T  7007892 catgaaggtctaaaagcaaaaaatcttcaaattacaa 7007856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 7008004 - 7008067
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  7008004 atatcatcgattttatacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 7008067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 7318236 - 7318173
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  7318236 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 7318173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 16138975 - 16138911
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||| ||||||| |||||||||||| ||||  ||| ||||||| ||||||||    
T  16138975 atatcttcgattttgtagagtcaaaattcatgaaggtccaaaataaaaaaatctttgaattacaa 16138911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 17886646 - 17886709
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| ||||||||| || |||| |||| || ||| |||||||||    
T  17886646 atatcatcgattttgtacagtcaaagttcatgaagatccaaaaccaaa-aaacttcaaattacaa 17886709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 18048961 - 18048898
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  18048961 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 18048898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 42794156 - 42794093
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  42794156 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 42794093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 43830733 - 43830796
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  43830733 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 43830796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 40995308 - 40995381
Alignment:
Q  10 atcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatct 84  Q
    ||||| ||||||||||||| ||||  || ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  40995308 atcatttattttgtacagttaaataacacgaaagtctaaaagcaaagaatctttaaatta-aaaggttggaatct 40995381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 23108867 - 23108927
Alignment:
Q  11 tcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||||||||| ||||||||||||||||| || | |||||| |||||||||    
T  23108867 tcatctattttgtacagtcaaaattcatgaaggtctaaaaccata-aatcttcaaattacaa 23108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 31312684 - 31312747
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||    
T  31312684 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaaccaaa-aatcttcaaattacaa 31312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 21125225 - 21125183
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaa 50  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  21125225 atatcatctattttgtacagtcaaaattcatgaaggtccaaaa 21125183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 8855542 - 8855479
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  8855542 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 8855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 11721410 - 11721347
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  11721410 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 11721347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 12148139 - 12148202
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  12148139 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattacaa 12148202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 17190832 - 17190792
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaa 48  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  17190832 atatcatcgattttgtacagtcaaaattcatgaaggtctaa 17190792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 4414062 - 4414008
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  4414062 attttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 4414008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 7577932 - 7577986
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||| |||||| |||||||||||| |||| |||| ||||||||||||||||    
T  7577932 attttgtaccgtcaaaattcatgaaggtccaaaaccaaa-aatctttaaattacaa 7577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 8861437 - 8861484
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaa 55  Q
    ||||| || |||||||||||||||| ||||||||||||||||| ||||    
T  8861437 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaatcaaa 8861484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 18231990 - 18232053
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||| ||| |||||||| ||||||| |||||||||||  |||| |||| |||||||||||||||    
T  18231990 atattatcgattttgtagagtcaaaattcatgaaggttcaaaaccaaagaatctttaaattaca 18232053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 20355159 - 20355097
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| |||||||||||||||| |||||||||||  |||| |||| |||||| ||||||||    
T  20355159 atatcatcgattttgtacagtcaaaattcatgaaggttcaaaaccaaa-aatcttcaaattaca 20355097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 6527402 - 6527460
Alignment:
Q  11 tcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||| |||||||||||||||| || ||||||||| |||| ||||||| ||| ||||||    
T  6527402 tcatcgattttgtacagtcaaaatttatgaaggtccaaaatcaaataaccttcaaatta 6527460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 23159612 - 23159551
Alignment:
Q  7 aatatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    |||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||||||||||    
T  23159612 aatatcttcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaa-aatctttaaatta 23159551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 34309541 - 34309583
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaa 50  Q
    |||||||| |||||||||||||||| |||||||||||| ||||    
T  34309541 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaa 34309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 43287823 - 43287758
Alignment:
Q  7 aatatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| ||||||||| |||| ||||||||||  |||||  |||| ||||||||||| |||||||||    
T  43287823 aatattatctattttatacaatcaaatttcacaaaggttcaaaaccaaataatcttcaaattacaa 43287758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 21040009 - 21039946
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  21040009 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatattcaaattacaa 21039946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 22756295 - 22756358
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||| ||||| |||||||||||| |||| |||| |||||| |||||||||    
T  22756295 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 22756358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25233857 - 25233920
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  25233857 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 25233920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25298017 - 25298080
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  25298017 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 25298080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30916627 - 30916564
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||| ||||| ||||||||||| ||||| |||| |||||| |||||||||    
T  30916627 atatcttcgattttgtacaatcaaaattcatgaaggtataaaaccaaa-aatcttcaaattacaa 30916564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31567777 - 31567714
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||  |||||||||||||||| ||| |||||||| |||| |||| |||||| |||||||||    
T  31567777 atatcattgattttgtacagtcaaaattcttgaaggtccaaaaccaaa-aatcttcaaattacaa 31567714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31920204 - 31920141
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||| ||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  31920204 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 31920141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 41123375 - 41123438
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||||||| || |||||||||||| |||| |||| |||||| |||||||||    
T  41123375 atatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 41123438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 45687812 - 45687873
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    |||||||| ||||||||| |||||| |||||||||||||||||  |||||||||| ||||||    
T  45687812 atatcatcgattttgtacggtcaaaattcatgaaggtctaaaacgaaataatcttcaaatta 45687873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 8391107 - 8391044
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||| |||||  |||||||||    
T  8391107 atatcatctattttgtacagtcaaaattcatgaaggtccaaaatcaaa-aatctacaaattacaa 8391044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 1853246 - 1853184
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| |||||| ||||||||    
T  1853246 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattaca 1853184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 2936310 - 2936373
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| |||||||||||||||| || ||||||||| |||| |||| |||||| ||||||||    
T  2936310 atatcatcgattttgtacagtcaaaatttatgaaggtcgaaaaccaaagaatcttcaaattaca 2936373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 13264013 - 13263948
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaag 74  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||||    
T  13264013 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaaag 13263948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 2300966 - 2300903
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| | || |||||| |||||||||    
T  2300966 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaatc-aagaatcttcaaattacaa 2300903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 2514143 - 2514206
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||| ||||||| |||| |||| |||||| |||||||||    
T  2514143 atatcatcgattttgtacagtcaaaattcacgaaggtccaaaatcaaa-aatcttcaaattacaa 2514206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 5864676 - 5864739
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  5864676 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 5864739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 17051961 - 17051897
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  17051961 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaatcaaaaaatattcaaattacaa 17051897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 26254788 - 26254851
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  26254788 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 26254851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 27082734 - 27082793
Alignment:
Q  25 cagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| ||||| ||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  27082734 cagtcaaaattcataaaggtctaaaaccaaataatcttcaaattac-agggttggaatcta 27082793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 27195567 - 27195508
Alignment:
Q  25 cagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| ||||| ||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  27195567 cagtcaaaattcataaaggtctaaaaccaaataatcttcaaattac-agggttggaatcta 27195508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31307995 - 31307932
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  31307995 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattacaa 31307932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 33441095 - 33441158
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| || | |||||| |||||||||    
T  33441095 atatcatctattttgtacaatcaaaattcatgaaggtccaaaaccaga-aatcttcaaattacaa 33441158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 40938251 - 40938200
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||    
T  40938251 attttgtactgtcaaaattcatgaaggtctaaaaccaaa-aatctttaaatta 40938200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 21074385 - 21074458
Alignment:
Q  10 atcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||||||| | ||||||||| || |||||||||||||||||| || | ||||||||| |||||| |||||||    
T  21074385 atcatctattttatgcagtcaaatgtcgtgaaggtctaaaagcaaagaa-ccttaaattac-aaggttagaatcta 21074458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 32199992 - 32200034
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaa 50  Q
    |||||||| |||||||||||||||| |||||||||||| ||||    
T  32199992 atatcatcgattttgtacagtcaaagttcatgaaggtccaaaa 32200034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 34258337 - 34258379
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaa 50  Q
    |||||||| |||||||||||||||| ||||||||| |||||||    
T  34258337 atatcatcgattttgtacagtcaaaattcatgaagatctaaaa 34258379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 442679 - 442616
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| || ||||||    
T  442679 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttacaa 442616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 3401946 - 3401883
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  3401946 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 3401883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 11576801 - 11576864
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||| ||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  11576801 atatcttcgatttcgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattacaa 11576864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 14187824 - 14187887
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| ||||| ||||||||||| |||| ||| || |||||||||    
T  14187824 atatcttcaattttgtacagtcaaaattcattaaggtctaaaaccaaa-aatattcaaattacaa 14187887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 17155752 - 17155693
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatt 68  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||    
T  17155752 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaatt 17155693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 18828744 - 18828681
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||||||||||||||| ||| ||| || ||||||||| |||| || | ||||||||||||||||    
T  18828744 atatcatctattttgtatagtgaaaatttatgaaggtccaaaaccaga-aatctttaaattacaa 18828681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 20055051 - 20055114
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||| ||| |||| |||| |||||| |||||||||    
T  20055051 atatcttcaattttgtacagtcaaaattcatgaaagtccaaaaccaaa-aatcttcaaattacaa 20055114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 21522000 - 21522063
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| || ||||||    
T  21522000 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttacaa 21522063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30632142 - 30632079
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||| |||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  30632142 atatcttcaattttgtgcagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 30632079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31749464 - 31749401
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||| ||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  31749464 atatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 31749401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 31863941 - 31864004
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||  |||||||||||| |||| |||| || ||| |||||||||    
T  31863941 atatcatcgattttgtacagtcaagattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 31864004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 32946430 - 32946367
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||| ||| |||||||||||| |||| |||| || ||| |||||||||    
T  32946430 atatcatcgattttgtacagttaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 32946367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 35158327 - 35158264
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||| ||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  35158327 atatcttcgattttgtatagtcaaaattcatgaaggtccaaaatcaaa-aatcttcaaattacaa 35158264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 13436994 - 13436931
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||| ||||| ||||||||||||||||| |||| |||||| |||||||||    
T  13436994 atatcatcgattttgtacaatcaaaattcatgaaggtctaaaa-caaaaaatcttcaaattacaa 13436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 44228420 - 44228357
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| ||||||  |||||||| |||||||||||| |||| |||| |||||||||||||||    
T  44228420 atatcatcaattttgcccagtcaaaattcatgaaggtccaaaaccaaagaatctttaaattaca 44228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 33864196 - 33864120
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| |||||||||||||||| ||||||||| |  |||| |||| |||||| ||||||| | ||||||||||||    
T  33864196 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattac-agggttggaatcta 33864120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 33916726 - 33916802
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaaggttggaatcta 85  Q
    |||||||| |||||||||||||||| ||||||||| |  |||| |||| |||||| ||||||| | ||||||||||||    
T  33916726 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattac-agggttggaatcta 33916802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 14909989 - 14910052
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||| ||| |||||||||||| ||||||||| || ||| |||||||||    
T  14909989 atatcatcgattttgtacagttaaaattcatgaaggtccaaaagcaaa-aaacttcaaattacaa 14910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 22387406 - 22387469
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| ||| |||||||| |||| |||| ||||||||||||||||    
T  22387406 atatcttcgattttgtacagtcaaaattcttgaaggtccaaaaccaaa-aatctttaaattacaa 22387469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 26190875 - 26190812
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  26190875 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 26190812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 5932106 - 5932043
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||||||| || |||||||||||| |||| |||| |||||| |||||||||    
T  5932106 atatcttcgattttgtacagtcgaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 5932043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 9209719 - 9209656
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  9209719 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 9209656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 23161970 - 23161907
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| |||||| |||||||||    
T  23161970 atatcttcgattttgtaccgtcaaaattcatgaaggtccaaaatcaaa-aatcttcaaattacaa 23161907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 26399087 - 26399150
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| ||| || |||||||||    
T  26399087 atatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatattcaaattacaa 26399150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 41189981 - 41189918
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| ||||||||| |||||| | ||||||||||||||| || | |||||| |||||||||    
T  41189981 atatcatcgattttgtaccgtcaaaatccatgaaggtctaaaaccata-aatcttcaaattacaa 41189918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 25166997 - 25166931
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaag 74  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||  ||| ||||||||||||||||||    
T  25166997 atatcatcgattttgtatagtcaaaattcataaaggtccaaaataaaaaaatctttaaattacaaag 25166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 9222558 - 9222621
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||||| |||| |||| || ||| |||||||||    
T  9222558 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aaacttcaaattacaa 9222621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 12293007 - 12292944
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  12293007 atatcttcaattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 12292944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 2270588 - 2270534
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||||||||||| |||||||||||| |||| |||| ||||||| ||||||||    
T  2270588 attttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatctttgaattacaa 2270534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 32603724 - 32603779
Alignment:
Q  17 attttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaaag 74  Q
    |||||||||||||||| |||||||||||| |||| |||  |||||| |||||||||||    
T  32603724 attttgtacagtcaaaattcatgaaggtccaaaaccaa--aatcttcaaattacaaag 32603779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 8237783 - 8237720
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    |||||||| |||||||||||||||| |||||||||| | |||| |||| || ||| |||||||||    
T  8237783 atatcatcgattttgtacagtcaaaattcatgaaggaccaaaaccaaa-aaacttcaaattacaa 8237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 9676451 - 9676514
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||| |||||||||| ||||||||| || |||| |||| ||||||||||||||||    
T  9676451 atatcttcgattttatacagtcaaaattcatgaagatccaaaaccaaa-aatctttaaattacaa 9676514  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 145121 - 145181
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaatta 69  Q
    ||||||||||||||||||||||| | |||||||||||| |||| |||| |||||| ||||||    
T  145121 atatcatctattttgtacagtcacaattcatgaaggtccaaaatcaaa-aatcttcaaatta 145181  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 212657 - 212594
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  212657 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 212594  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 82292 - 82250
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaa 50  Q
    |||| ||| |||||||||||||||| |||||||||||||||||    
T  82292 atattatcaattttgtacagtcaaaattcatgaaggtctaaaa 82250  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 332208 - 332145
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| |||||||||    
T  332208 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaattacaa 332145  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 316576 - 316515
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattaca 71  Q
    |||||||| |||||||||||||||| ||||||||| || |||| ||||||||||| ||||||||    
T  316576 atatcatcgattttgtacagtcaaa-ttcatgaagttc-aaaaccaaataatcttcaaattaca 316515  T

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Target: scaffold0430 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 12714 - 12777
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || ||||||||| |||||| |||||||||||| |||| |||| ||||||| ||||||||    
T  12714 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaaccaaa-aatctttgaattacaa 12777  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18831 - 18894
Alignment:
Q  8 atatcatctattttgtacagtcaaatttcatgaaggtctaaaagcaaataatctttaaattacaa 72  Q
    ||||| || |||||||||||||||| |||||||||||| |||| |||| |||||| ||| |||||    
T  18831 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaa-aatcttcaaaatacaa 18894  T

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