View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3065-Insertion-9 (Length: 395)
Name: NF3065-Insertion-9
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3065-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 29481952 - 29481568
Alignment:
| Q |
7 |
attattgttttggtacatgggaaaagaaactaatgaaaacaaatagagagatctaagtaaacagttttaaactataattaatttcttggagttaaatttg |
106 |
Q |
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| T |
29481952 |
attattgttttggtacatgggaaaagaaactaatgaaaacaaatagagagatctaagtaaacagttttaaactataattagtttcttggagt-aaatttg |
29481854 |
T |
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| Q |
107 |
gttatgtacttaattcattttttgttttggtaatgttataggctttggctaaacatatccatggaacaatgagaaaatcaagcttactgatctcaaatgt |
206 |
Q |
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| T |
29481853 |
gttatgtacttaattaattttttgttttggtaatgttataggctttggctaaacatatccatggaacaatgagaaaatcaagcttactgatctcaaatgt |
29481754 |
T |
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| Q |
207 |
ggctggaccaatcgagcaaatggcttgggcaaatcatcctataggaggcttcttctttacgttgtccggcattcctcaggtaaacctaactcccttcctc |
306 |
Q |
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| T |
29481753 |
ggctggaccaatcgagcaaatggcttgggcaaatcatcctataggaggcttcttctttacgttgtccggcattcctcaggtaaacctaactcccttcctc |
29481654 |
T |
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| Q |
307 |
tttcatcttctaagatataccaaaatttggtttgtactagtactttataaatgcaaaataattttattgaaaagtgtaaattgcta |
392 |
Q |
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| T |
29481653 |
tttcatcttctaagatataccaaaatttggtttgtactagcactttataaatgcaaaataattttattgaaaagtgtaaattgcta |
29481568 |
T |
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