View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3065R-Insertion-12 (Length: 331)
Name: NF3065R-Insertion-12
Description: NF3065R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3065R-Insertion-12 |
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Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 49659811 - 49660124
Alignment:
| Q |
9 |
tttgtgtgttcttttgatctgtgttgccatcgccatcgtgttttttgctctattggaccgaatcgaagacttgttccgtgtccgatgtggataccacaca |
108 |
Q |
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| T |
49659811 |
tttgtgtgttcttttgatctgtgttgccatcgccatcgtgttttttgctctattggaccgaatcgaagacttgttccgtgtccgatgtggataccacaca |
49659910 |
T |
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| Q |
109 |
aacacatgtgattacactcaattatttcagttttctctaatttctatcggtgttggtgttagtgtcatgatcagcgtctgttccttgtgttggtgcttca |
208 |
Q |
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| T |
49659911 |
gacacatgtgattacactcaattatttcagttttctctaatttctatcggtgtcggtgttagtgtcatgatcagcgtctgttccttgtgttggtgcttca |
49660010 |
T |
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| Q |
209 |
tcatacttcataggttttcgttaatactcattttttgacaagatatgattgttttttaatagctgacaatgtcattgaaagttttcttttaactgttaat |
308 |
Q |
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| T |
49660011 |
tcatacttcataggttttcgttaatactcattttttgacaagatatgattg-tttttaatagctgacaatgtcattgaaagttttcttttaactgttaat |
49660109 |
T |
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| Q |
309 |
aattgtaagtcttgt |
323 |
Q |
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| T |
49660110 |
aattgtaagttttgt |
49660124 |
T |
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