View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3065R-Insertion-19 (Length: 860)

Name: NF3065R-Insertion-19
Description: NF3065R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3065R-Insertion-19
NF3065R-Insertion-19
[»] chr2 (14 HSPs)
chr2 (9-581)||(24463006-24463583)
chr2 (648-693)||(45416358-45416403)
chr2 (648-690)||(10973019-10973061)
chr2 (648-692)||(18550063-18550107)
chr2 (648-687)||(41178543-41178582)
chr2 (648-687)||(42519522-42519561)
chr2 (648-690)||(5363150-5363192)
chr2 (648-690)||(12620884-12620926)
chr2 (648-690)||(17615493-17615535)
chr2 (648-690)||(31653913-31653955)
chr2 (648-690)||(36219187-36219229)
chr2 (648-690)||(39374576-39374618)
chr2 (648-690)||(43271312-43271354)
chr2 (648-685)||(1229484-1229521)
[»] chr8 (18 HSPs)
chr8 (648-687)||(41219501-41219540)
chr8 (648-690)||(19182456-19182498)
chr8 (648-708)||(16356567-16356627)
chr8 (648-687)||(30378025-30378064)
chr8 (648-687)||(44090715-44090754)
chr8 (648-690)||(12617033-12617075)
chr8 (648-690)||(16355895-16355937)
chr8 (648-690)||(27520200-27520242)
chr8 (648-690)||(30378736-30378778)
chr8 (648-690)||(32379387-32379429)
chr8 (648-690)||(32433342-32433384)
chr8 (648-690)||(34050097-34050139)
chr8 (648-690)||(36052473-36052515)
chr8 (648-686)||(40042186-40042224)
chr8 (648-690)||(41220219-41220261)
chr8 (648-690)||(42174677-42174719)
chr8 (649-690)||(14913482-14913523)
chr8 (648-689)||(44089972-44090013)
[»] chr5 (15 HSPs)
chr5 (648-707)||(5904897-5904956)
chr5 (648-687)||(20452864-20452903)
chr5 (648-690)||(38983956-38983998)
chr5 (648-687)||(19000818-19000857)
chr5 (648-687)||(39986158-39986197)
chr5 (648-690)||(796432-796474)
chr5 (648-690)||(4035216-4035258)
chr5 (648-690)||(4291197-4291239)
chr5 (648-690)||(6450689-6450731)
chr5 (648-686)||(6656768-6656806)
chr5 (648-690)||(14712132-14712174)
chr5 (648-690)||(18740195-18740237)
chr5 (648-690)||(27189620-27189662)
chr5 (648-686)||(27432691-27432729)
chr5 (649-690)||(8315071-8315112)
[»] chr4 (32 HSPs)
chr4 (648-687)||(13460568-13460607)
chr4 (648-687)||(52224378-52224417)
chr4 (648-690)||(47875440-47875482)
chr4 (648-687)||(6203005-6203044)
chr4 (648-687)||(10386928-10386967)
chr4 (648-687)||(13464797-13464836)
chr4 (648-687)||(15636753-15636792)
chr4 (648-687)||(23624321-23624360)
chr4 (648-687)||(29441817-29441856)
chr4 (648-687)||(29445470-29445509)
chr4 (648-687)||(31311980-31312019)
chr4 (648-687)||(42931386-42931425)
chr4 (648-687)||(47500442-47500481)
chr4 (648-690)||(4553207-4553249)
chr4 (648-690)||(4553925-4553967)
chr4 (648-686)||(5807053-5807091)
chr4 (648-690)||(11455614-11455656)
chr4 (648-690)||(11997279-11997321)
chr4 (648-690)||(15637471-15637513)
chr4 (648-690)||(22516215-22516257)
chr4 (648-690)||(28541411-28541453)
chr4 (648-690)||(28756872-28756914)
chr4 (648-690)||(29446188-29446230)
chr4 (648-690)||(29520517-29520559)
chr4 (648-690)||(31312698-31312740)
chr4 (648-690)||(34679839-34679881)
chr4 (648-690)||(39270311-39270353)
chr4 (648-690)||(39651922-39651964)
chr4 (648-690)||(50642111-50642153)
chr4 (648-690)||(53237482-53237524)
chr4 (648-690)||(55935524-55935566)
chr4 (648-689)||(11152848-11152889)
[»] chr7 (7 HSPs)
chr7 (648-690)||(24424502-24424544)
chr7 (648-690)||(28643036-28643078)
chr7 (648-687)||(45986416-45986455)
chr7 (648-690)||(7573677-7573719)
chr7 (648-690)||(9900053-9900095)
chr7 (648-690)||(30740175-30740217)
chr7 (648-693)||(23140864-23140909)
[»] chr3 (23 HSPs)
chr3 (648-690)||(31269095-31269137)
chr3 (648-690)||(50361901-50361943)
chr3 (648-690)||(51367964-51368006)
chr3 (649-690)||(52716989-52717030)
chr3 (648-687)||(1486782-1486821)
chr3 (648-687)||(7588087-7588126)
chr3 (648-690)||(868957-868999)
chr3 (648-690)||(3077885-3077927)
chr3 (648-690)||(4735296-4735338)
chr3 (648-690)||(10182781-10182823)
chr3 (648-690)||(16128043-16128085)
chr3 (648-690)||(16644136-16644178)
chr3 (648-690)||(17639476-17639518)
chr3 (648-690)||(24342897-24342939)
chr3 (648-690)||(36777380-36777422)
chr3 (648-690)||(37125494-37125536)
chr3 (648-690)||(43128234-43128276)
chr3 (648-690)||(43659923-43659965)
chr3 (648-690)||(48586422-48586464)
chr3 (648-690)||(53628499-53628541)
chr3 (648-690)||(55006706-55006748)
chr3 (648-689)||(8338867-8338908)
chr3 (649-690)||(29166546-29166587)
[»] chr1 (31 HSPs)
chr1 (648-690)||(14422084-14422126)
chr1 (648-690)||(45195007-45195049)
chr1 (648-690)||(45336966-45337008)
chr1 (648-690)||(48624488-48624530)
chr1 (648-688)||(10382593-10382633)
chr1 (648-692)||(14421582-14421626)
chr1 (648-688)||(31266469-31266509)
chr1 (648-687)||(26451015-26451054)
chr1 (648-687)||(26911395-26911434)
chr1 (648-718)||(50934230-50934300)
chr1 (648-690)||(4008314-4008356)
chr1 (648-690)||(4058355-4058397)
chr1 (648-690)||(4829128-4829170)
chr1 (648-718)||(6331901-6331971)
chr1 (648-690)||(10371089-10371131)
chr1 (648-690)||(10372264-10372306)
chr1 (648-690)||(10658122-10658164)
chr1 (648-690)||(14007261-14007303)
chr1 (648-690)||(14411452-14411494)
chr1 (648-690)||(15357837-15357879)
chr1 (648-686)||(17964672-17964710)
chr1 (648-690)||(26910670-26910712)
chr1 (648-690)||(32036766-32036808)
chr1 (648-690)||(36449016-36449058)
chr1 (648-690)||(36796585-36796627)
chr1 (648-690)||(47208813-47208855)
chr1 (648-690)||(47632158-47632200)
chr1 (648-690)||(48467735-48467777)
chr1 (648-690)||(48724077-48724119)
chr1 (648-690)||(52761344-52761386)
chr1 (649-690)||(4573580-4573621)
[»] scaffold0618 (1 HSPs)
scaffold0618 (648-687)||(9156-9195)
[»] chr6 (8 HSPs)
chr6 (648-687)||(16270120-16270159)
chr6 (648-690)||(13400827-13400869)
chr6 (648-690)||(19417239-19417281)
chr6 (648-690)||(19692664-19692706)
chr6 (648-690)||(22006655-22006697)
chr6 (648-690)||(30753293-30753335)
chr6 (648-690)||(31280209-31280251)
chr6 (648-690)||(34379273-34379315)
[»] scaffold1157 (1 HSPs)
scaffold1157 (648-690)||(2302-2344)
[»] scaffold0087 (4 HSPs)
scaffold0087 (649-690)||(161-202)
scaffold0087 (649-690)||(5000-5041)
scaffold0087 (649-690)||(15050-15091)
scaffold0087 (649-690)||(22115-22156)


Alignment Details
Target: chr2 (Bit Score: 470; Significance: 0; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 9 - 581
Target Start/End: Original strand, 24463006 - 24463583
Alignment:
Q  9 aaaacatatcagaaattatatactgaggaggtgaatgatgagagtggaaccaattgagaagtggatcgtgaagattcgagacagcgaggatgaaggtgtg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||     
T  24463006 aaaacatatcagaaattatatactgaggaggtgaatgatgagagtggaaccaattgagaagcgggtcatgaagcttcgagacagcgaggatgaaggtgtc 24463105  T
Q  109 gaatgagtttggtaagtctttggcgttttcgatgccgcgagggattgatgggtgagacgggaaagggaggattaatgggtggattgttgaagggtgagag 208  Q
    ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24463106 gaaggagtttggtaagtcttttgcgttttcgatgccgtgagggattgatgggtgagacgggaaagggaggattaaagggtggattgttgaagggtgagag 24463205  T
Q  209 ttgaggagaggggttaagagggattggttttttggggttgtgaggatggtgatggtgaggttggtgatggtggatgccagtttgtgggtgaggtcgagga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24463206 ttgaggagaggggttaagagggattggttttttggggttgtgaggatggtgatggtgaggttggtgatggtggatgccagtttgtgggtaaggtcgagga 24463305  T
Q  309 ggggtatcatgtggccttgagctgggaatgggatcaccagtgcatggggttgggggctgtttttgccaggttgaaacgtcatggtgtttaggattggaga 408  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || |||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  24463306 ggggtatcatgtggccttgagctgggaatgggatcaccagtgtatgtggatgggggttgtttttgtcaggttgaaacgtcatggtgtttaggattagaga 24463405  T
Q  409 aggtaaatggtatacaaaatggatttgaattagaataaggttgtggtatggtgtataatgaataaaatgaattgaatgagaacttgagtaggttgtattg 508  Q
    ||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24463406 agggaaatggaatacaaaatggatttgaattagaaaaaggttgtggtatggtatataatgaataaaatgaattgaatgagaacttgagtaggttgtattg 24463505  T
Q  509 tctttgact-----accacaaaacgttacattctcgtaatgtcttttgtttgtgggtcatgtcaatgggtatggttgt 581  Q
    |||||||||     ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24463506 tctttgactaccacaccacaaaacgttacgttctcgtaatgtcttttgtttgtgggtcatgttaatgggtatggttgt 24463583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 45416358 - 45416403
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtcaa 693  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  45416358 ataaaaagaaatcacactttttagtccctctaaaattttctgtcaa 45416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 10973061 - 10973019
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  10973061 ataaaaataaatcacactttttagtccttacaaaattttctgt 10973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 692
Target Start/End: Complemental strand, 18550107 - 18550063
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtca 692  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  18550107 ataaaaataaatcacactttttagtccctacaaaattttctgtca 18550063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 41178543 - 41178582
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  41178543 ataaaaataaatcacactttttagtccttacaaaattttc 41178582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 42519522 - 42519561
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  42519522 ataaaaataaatcacactttttagtccttacaaaattttc 42519561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 5363150 - 5363192
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  5363150 ataaaaataaatcacactttttagtccatacaaaattttctgt 5363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 12620926 - 12620884
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  12620926 ataaaaataaatcacactttttagtccctacaaaattttctgt 12620884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 17615535 - 17615493
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  17615535 ataaaaataaatcacactttttagtccctacaaaattttctgt 17615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 31653955 - 31653913
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  31653955 ataaaaataaatcacactttttagtccatacaaaattttctgt 31653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 36219229 - 36219187
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36219229 ataaaaataaatcacactttttagtccctacaaaattttctgt 36219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 39374576 - 39374618
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39374576 ataaaaataaatcacactttttagtccctacaaaattttctgt 39374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 43271354 - 43271312
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  43271354 ataaaaataaatcacactttttagtccctacaaaattttctgt 43271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 685
Target Start/End: Original strand, 1229484 - 1229521
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattt 685  Q
    |||||||||||||||||||||||||||||  |||||||    
T  1229484 ataaaaataaatcacactttttagtccttacaaaattt 1229521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000008; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 41219501 - 41219540
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  41219501 ataaaaataaatcacactttttagtccttataaaattttc 41219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 19182456 - 19182498
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  19182456 ataaaaataaatcacactttttagtccctataaaattttctgt 19182498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 708
Target Start/End: Complemental strand, 16356627 - 16356567
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccctg 708  Q
    |||||||||||||||||||||||||||||  ||||||||| || |  ||||||| ||||||    
T  16356627 ataaaaataaatcacactttttagtccttacaaaattttccgttagtatttttggtccctg 16356567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 30378025 - 30378064
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  30378025 ataaaaataaatcacactttttagtccctataaaattttc 30378064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 44090754 - 44090715
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  44090754 ataaaaataaatcacactttttagtccctataaaattttc 44090715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 12617075 - 12617033
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||| |||||| ||||| |||||||||||||    
T  12617075 ataaaaataaatcacattttttaatccttataaaattttctgt 12617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 16355895 - 16355937
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16355895 ataaaaataaatcacactttttagtccctacaaaattttctgt 16355937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 27520242 - 27520200
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  27520242 ataaaaataaatcacactttttagtccctacaaaattttctgt 27520200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 30378778 - 30378736
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30378778 ataaaaataaatcacactttttagtccctacaaaattttctgt 30378736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 32379429 - 32379387
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  32379429 ataaaaataaatcacagtttttagtccttacaaaattttctgt 32379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 32433384 - 32433342
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  32433384 ataaaaataaatcacagtttttagtccttacaaaattttctgt 32433342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 34050097 - 34050139
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34050097 ataaaaataaatcacactttttagtccctacaaaattttctgt 34050139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 36052515 - 36052473
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36052515 ataaaaataaatcacactttttagtccctacaaaattttctgt 36052473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 686
Target Start/End: Complemental strand, 40042224 - 40042186
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaatttt 686  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  40042224 ataaaaataaatcacactttttagtccatataaaatttt 40042186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 41220261 - 41220219
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  41220261 ataaaaataaatcacactttttagtccctacaaaattttctgt 41220219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 42174719 - 42174677
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  42174719 ataaaaataaatcacactttttagtccctacaaaattttctgt 42174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 14913482 - 14913523
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  14913482 taaaattaaatcacactttttagtccctataaaattttctgt 14913523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 44089972 - 44090013
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctg 689  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  44089972 ataaaaataaatcatactttttagtccctataaaattttctg 44090013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000008; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 707
Target Start/End: Original strand, 5904897 - 5904956
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccct 707  Q
    |||||||||||||||||||||||||||||  ||||||||| || || |||||| ||||||    
T  5904897 ataaaaataaatcacactttttagtccttacaaaattttccgttaatatttttaatccct 5904956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 20452864 - 20452903
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20452864 ataaaaataaatcacactttttagtccttataaaattttc 20452903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 38983998 - 38983956
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  38983998 ataaaaataaatcacactttttagtccttaaaaaattttctgt 38983956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 19000857 - 19000818
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  19000857 ataaaaataaatcacactttttagtccctataaaattttc 19000818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 39986197 - 39986158
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  39986197 ataaaaataaatcacactttttagtccctataaaattttc 39986158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 796474 - 796432
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  796474 ataaaaataaatcacactttttagtccctacaaaattttctgt 796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 4035258 - 4035216
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4035258 ataaaaataaatcacactttttagtccctacaaaattttctgt 4035216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 4291197 - 4291239
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4291197 ataaaaataaatcacactttttagtccctacaaaattttctgt 4291239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 6450731 - 6450689
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  6450731 ataaaaataaatcacactttttagtccctacaaaattttctgt 6450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 686
Target Start/End: Complemental strand, 6656806 - 6656768
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaatttt 686  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  6656806 ataaaaataaatcacactttttagtccctataaaatttt 6656768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 14712174 - 14712132
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14712174 ataaaaataaatcacactttttagtccctacaaaattttctgt 14712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 18740195 - 18740237
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  18740195 ataaaaataaatcacactttttagtccctacaaaattttctgt 18740237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 27189662 - 27189620
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  27189662 ataaaaataaatcacactttttagtccctacaaaattttctgt 27189620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 686
Target Start/End: Complemental strand, 27432729 - 27432691
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaatttt 686  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  27432729 ataaaaataaatcacactttttagtccttacaaaatttt 27432691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 8315071 - 8315112
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  8315071 taaaaataaatcacactttttagtccgtacaaaattttctgt 8315112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000008; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 13460568 - 13460607
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  13460568 ataaaaataaatcacactttttagtccttataaaattttc 13460607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 52224378 - 52224417
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  52224378 ataaaaataaatcacactttttagtccttataaaattttc 52224417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 47875440 - 47875482
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  47875440 ataaaaataaatcacactttttagtccttacaaaattttctgt 47875482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 6203005 - 6203044
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  6203005 ataaaaataaatcacactttttagtccttgcaaaattttc 6203044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 10386967 - 10386928
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  10386967 ataaaaataaatcacactttttagtccctataaaattttc 10386928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 13464836 - 13464797
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  13464836 ataaaaataaatcacactttttagtccctataaaattttc 13464797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 15636753 - 15636792
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  15636753 ataaaaataaatcacactttttagtccttacaaaattttc 15636792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 23624321 - 23624360
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  23624321 ataaaaataaatcacactttttagtccttacaaaattttc 23624360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 29441817 - 29441856
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  29441817 ataaaaataaatcacactttttagtccttacaaaattttc 29441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 29445470 - 29445509
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  29445470 ataaaaataaatcacactttttagtccttacaaaattttc 29445509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 31311980 - 31312019
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  31311980 ataaaaataaatcacactttttagtccctataaaattttc 31312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 42931425 - 42931386
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  42931425 ataaaaataaatcacactttttagtccctataaaattttc 42931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 47500481 - 47500442
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  47500481 ataaaaataaatcacactttttagtccctataaaattttc 47500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 4553207 - 4553249
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4553207 ataaaaataaatcacactttttagtccctagaaaattttctgt 4553249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 4553967 - 4553925
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4553967 ataaaaataaatcacactttttagtccatacaaaattttctgt 4553925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 686
Target Start/End: Original strand, 5807053 - 5807091
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaatttt 686  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  5807053 ataaaaataaatcacactttttagtccttacaaaatttt 5807091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 11455656 - 11455614
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  11455656 ataaaaataaatcacactttttagtccctacaaaattttctgt 11455614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 11997321 - 11997279
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  11997321 ataaaaataaatcacactttttagtccctacaaaattttctgt 11997279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 15637513 - 15637471
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  15637513 ataaaaataaatcacactttttagtccctacaaaattttctgt 15637471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 22516257 - 22516215
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  22516257 ataaaaataaatcacactttttagtccctacaaaattttctgt 22516215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 28541453 - 28541411
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  28541453 ataaaaataaatcacactttttagtccctataaatttttctgt 28541411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 28756914 - 28756872
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  28756914 ataaaaataaatcacactttttagtccctacaaaattttctgt 28756872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 29446230 - 29446188
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  29446230 ataaaaataaatcacactttttagtccctacaaaattttctgt 29446188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 29520517 - 29520559
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  29520517 ataaaaataaatcacactttttagtccctacaaaattttctgt 29520559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 31312740 - 31312698
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  31312740 ataaaaataaatcacactttttagtccctacaaaattttctgt 31312698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 34679839 - 34679881
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34679839 ataaaaataaatcacactttttagtccctacaaaattttctgt 34679881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 39270353 - 39270311
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39270353 ataaaaataaatcacactttttagtccctacaaaattttctgt 39270311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 39651964 - 39651922
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39651964 ataaaaataaatcacactttttagtccctacaaaattttctgt 39651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 50642111 - 50642153
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  50642111 ataaaaataaatcacactttttagtccctacaaaattttctgt 50642153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 53237482 - 53237524
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  53237482 ataaaaataaatcacactttttagtccctacaaaattttctgt 53237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 55935566 - 55935524
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  55935566 ataaaaataaatcacactttttagtccctacaaaattttctgt 55935524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Complemental strand, 11152889 - 11152848
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctg 689  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  11152889 ataaaaataaatcacactttttagtccctacaaaattttctg 11152848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 24424544 - 24424502
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  24424544 ataaaaataaatcacactttttagtccctataaaattttctgt 24424502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 28643078 - 28643036
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  28643078 ataaaaataaatcacactttttagtccctataaaattttctgt 28643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 45986455 - 45986416
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  45986455 ataaaaataaatcacactttttagtccttacaaaattttc 45986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 7573719 - 7573677
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  7573719 ataaaaataaatcacactttttagtccctacaaaattttctgt 7573677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 9900053 - 9900095
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  9900053 ataaaaataaatcacactttttagtccctacaaaattttctgt 9900095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 30740175 - 30740217
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30740175 ataaaaataaatcacactttttagtccctacaaaattttctgt 30740217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 23140864 - 23140909
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtcaa 693  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  23140864 ataaaaagaaatcacactttttaatctctctaaaattttctgtcaa 23140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 31269095 - 31269137
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  31269095 ataaaaataaatcacactttttagtccttacaaaattttctgt 31269137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 50361901 - 50361943
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  50361901 ataaaaataaatcacactttttagtccttacaaaattttctgt 50361943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 51367964 - 51368006
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  51367964 ataaaaataaatcacattttttagtccttataaaattttctgt 51368006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 690
Target Start/End: Complemental strand, 52717030 - 52716989
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  52717030 taaaattaaatcacactttttagtccttataaaattttctgt 52716989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 1486782 - 1486821
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  1486782 ataaaaataaatcacactttttagtccctataaaattttc 1486821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 7588126 - 7588087
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  7588126 ataaaaataaatcacactttttagtccttacaaaattttc 7588087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 868957 - 868999
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  868957 ataaaaataaatcacactttttagtccctacaaaattttctgt 868999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 3077885 - 3077927
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  3077885 ataaaaataaatcacactttttagtccctacaaaattttctgt 3077927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 4735296 - 4735338
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4735296 ataaaaataaatcacactttttagtccctgcaaaattttctgt 4735338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 10182823 - 10182781
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10182823 ataaaaataaatcacactttttagtccctacaaaattttctgt 10182781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 16128043 - 16128085
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16128043 ataaaaataaatcacactttttagtccctacaaaattttctgt 16128085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 16644136 - 16644178
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16644136 ataaaaataaatcacactttttagtccctacaaaattttctgt 16644178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 17639476 - 17639518
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  17639476 ataaaaataaatcacactttttagtccctacaaaattttctgt 17639518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 24342939 - 24342897
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  24342939 ataaaaataaatcacactttttagtccctacaaaattttctgt 24342897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 36777380 - 36777422
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36777380 ataaaaataaatcacactttttagtccctacaaaattttctgt 36777422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 37125494 - 37125536
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  37125494 ataaaaataaatcacactttttagtccctacaaaattttctgt 37125536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 43128276 - 43128234
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||| ||||||||||||||||  ||||||||||||    
T  43128276 ataaaaataaattacactttttagtccttacaaaattttctgt 43128234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 43659923 - 43659965
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  43659923 ataaaaataaatcacactttttagtccctacaaaattttctgt 43659965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 48586464 - 48586422
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48586464 ataaaaataaatcacactttttagtccctacaaaattttctgt 48586422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 53628499 - 53628541
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  53628499 ataaaaataaatcacactttttagtccctacaaaattttctgt 53628541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 55006748 - 55006706
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  55006748 ataaaaataaatcacactttttagtccctacaaaattttctgt 55006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 8338867 - 8338908
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctg 689  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  8338867 ataaaaataaatcacactttttagtccctacaaaattttctg 8338908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 29166546 - 29166587
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  29166546 taaaaataaatcacactttttagtccctacaaaattttctgt 29166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 14422126 - 14422084
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  14422126 ataaaaataaatcacactttttagtccttacaaaattttctgt 14422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 45195049 - 45195007
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  45195049 ataaaaataaatcacactttttagtccttacaaaattttctgt 45195007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 45337008 - 45336966
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  45337008 ataaaaataaatcacactttttagtccttacaaaattttctgt 45336966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 48624530 - 48624488
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  48624530 ataaaaataaatcacactttttagtccctataaaattttctgt 48624488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 688
Target Start/End: Original strand, 10382593 - 10382633
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttct 688  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  10382593 ataaaaataaatcacactttttagtccctataaaattttct 10382633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 692
Target Start/End: Original strand, 14421582 - 14421626
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtca 692  Q
    |||||||||||| | |||||||||||||| |||||||||||||||    
T  14421582 ataaaaataaattagactttttagtccttataaaattttctgtca 14421626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 688
Target Start/End: Original strand, 31266469 - 31266509
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttct 688  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31266469 ataaaaataaatcacactttttagtccctataaaattttct 31266509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 26451015 - 26451054
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  26451015 ataaaaataaatcacactttttagtccctataaaattttc 26451054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Complemental strand, 26911434 - 26911395
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  26911434 ataaaaataaatcacactttttagtccctataaaattttc 26911395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 718
Target Start/End: Original strand, 50934230 - 50934300
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtca-agatttttgatccctgctcttaagtg 718  Q
    |||||||||||||||| |||||||||| | ||||||||||||| | ||||||| | |||||||| |||||||    
T  50934230 ataaaaataaatcacattttttagtccctataaaattttctgttatagattttag-tccctgctgttaagtg 50934300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 4008314 - 4008356
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4008314 ataaaaataaatcacactttttagtccctacaaaattttctgt 4008356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 4058397 - 4058355
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4058397 ataaaaataaatcacactttttagtccctacaaaattttctgt 4058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 4829128 - 4829170
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  4829128 ataaaaataaatcacactttttagcccctataaaattttctgt 4829170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 718
Target Start/End: Complemental strand, 6331971 - 6331901
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccctgctcttaagtg 718  Q
    |||||||||||||||||||| |||||| | ||||||||| ||||||  |||||  ||| |||| |||||||    
T  6331971 ataaaaataaatcacactttctagtccatataaaattttttgtcaaagtttttagtccttgctgttaagtg 6331901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 10371089 - 10371131
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  10371089 ataaaaataaatcacactttttagtccctataaatttttctgt 10371131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 10372264 - 10372306
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10372264 ataaaaataaatcacactttttagtccctacaaaattttctgt 10372306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 10658122 - 10658164
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10658122 ataaaaataaatcacactttttagtccctacaaaattttctgt 10658164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 14007303 - 14007261
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14007303 ataaaaataaatcacactttttagtccctacaaaattttctgt 14007261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 14411494 - 14411452
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14411494 ataaaaataaatcacactttttagtccctacaaaattttctgt 14411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 15357837 - 15357879
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  15357837 ataaaaataaatcacactttttagtccctacaaaattttctgt 15357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 686
Target Start/End: Complemental strand, 17964710 - 17964672
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaatttt 686  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  17964710 ataaaaataaatcacactttttagtccctataaaatttt 17964672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 26910670 - 26910712
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  26910670 ataaaaataaatcacactttttagtccctacaaaattttctgt 26910712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 32036766 - 32036808
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  32036766 ataaaaataaatcacactttttagtccctacaaaattttctgt 32036808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 36449016 - 36449058
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36449016 ataaaaataaatcacactttttagtccctacaaaattttctgt 36449058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 36796627 - 36796585
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36796627 ataaaaataaatcacactttttagtccctacaaaattttctgt 36796585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 47208813 - 47208855
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  47208813 ataaaaataaatcacactttttaatccttacaaaattttctgt 47208855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 47632158 - 47632200
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  47632158 ataaaaataaatcacactttttagtccctacaaaattttctgt 47632200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 48467735 - 48467777
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48467735 ataaaaataaatcacactttttagtccctacaaaattttctgt 48467777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 48724119 - 48724077
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48724119 ataaaaataaatcacactttttagtccctacaaaattttctgt 48724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 52761386 - 52761344
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  52761386 ataaaaataaatcacactttttagtccctacaaaattttctgt 52761344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 4573580 - 4573621
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  4573580 taaaaataaatcacactttttagtccctacaaaattttctgt 4573621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 9156 - 9195
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  9156 ataaaaataaatcacactttttagtccctataaaattttc 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 687
Target Start/End: Original strand, 16270120 - 16270159
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttc 687  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  16270120 ataaaaataaatcacactttttagtccttacaaaattttc 16270159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 13400869 - 13400827
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  13400869 ataaaaataaatcacactttttagtccctacaaaattttctgt 13400827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 19417281 - 19417239
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  19417281 ataaaaataaatcacactttttagtccctacaaaattttctgt 19417239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 19692664 - 19692706
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  19692664 ataaaaataaatcacactttttagtccctacaaaattttctgt 19692706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 22006655 - 22006697
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  22006655 ataaaaataaatcacactttttagtccctacaaaattttctgt 22006697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 30753293 - 30753335
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30753293 ataaaaataaatcacactttttagtccctacaaaattttctgt 30753335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 31280251 - 31280209
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  31280251 ataaaaataaatcacactttttagtgcttacaaaattttctgt 31280209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 34379315 - 34379273
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34379315 ataaaaataaatcacactttttagtccctacaaaattttctgt 34379273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 2302 - 2344
Alignment:
Q  648 ataaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  2302 ataaaaataaatcacactttttagtccctacaaaattttctgt 2344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.0000003; HSPs: 4)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 161 - 202
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  161 taaaaataaatcatactttttagtccttacaaaattttctgt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 5000 - 5041
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  5000 taaaaataaatcacactttttagtccctacaaaattttctgt 5041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 15050 - 15091
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  15050 taaaaataaatcatactttttagtccttacaaaattttctgt 15091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 690
Target Start/End: Original strand, 22115 - 22156
Alignment:
Q  649 taaaaataaatcacactttttagtccttctaaaattttctgt 690  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  22115 taaaaataaatcacactttttagtccctacaaaattttctgt 22156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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