View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3065_high_28 (Length: 253)

Name: NF3065_high_28
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3065_high_28
NF3065_high_28
[»] chr8 (22 HSPs)
chr8 (15-253)||(11461182-11461424)
chr8 (15-253)||(18396781-18397023)
chr8 (143-226)||(11460723-11460807)
chr8 (143-195)||(28879035-28879087)
chr8 (141-193)||(35168356-35168408)
chr8 (142-195)||(34286620-34286673)
chr8 (148-195)||(35453392-35453439)
chr8 (142-195)||(10213701-10213754)
chr8 (145-194)||(32975666-32975715)
chr8 (143-175)||(10298833-10298865)
chr8 (144-195)||(9130938-9130989)
chr8 (152-195)||(32213079-32213122)
chr8 (145-175)||(10480026-10480056)
chr8 (145-179)||(30973954-30973988)
chr8 (147-188)||(9781196-9781237)
chr8 (142-183)||(10298995-10299036)
chr8 (142-191)||(35286046-35286095)
chr8 (142-179)||(36907735-36907772)
chr8 (145-194)||(41145456-41145505)
chr8 (143-175)||(11460796-11460828)
chr8 (147-195)||(13265465-13265513)
chr8 (147-183)||(28280690-28280726)
[»] chr4 (31 HSPs)
chr4 (140-195)||(7148746-7148801)
chr4 (133-195)||(9319162-9319224)
chr4 (142-192)||(825658-825708)
chr4 (145-195)||(28663407-28663457)
chr4 (148-194)||(36740886-36740932)
chr4 (141-195)||(52274177-52274231)
chr4 (142-195)||(825796-825849)
chr4 (148-195)||(488441-488488)
chr4 (145-195)||(2141620-2141670)
chr4 (142-179)||(23297400-23297437)
chr4 (142-195)||(28074341-28074394)
chr4 (142-179)||(29877601-29877638)
chr4 (142-179)||(34633361-34633398)
chr4 (147-195)||(34633504-34633552)
chr4 (143-175)||(43699574-43699606)
chr4 (146-194)||(48591482-48591530)
chr4 (148-179)||(1374450-1374481)
chr4 (142-173)||(42153067-42153098)
chr4 (142-192)||(42697288-42697339)
chr4 (145-183)||(29615492-29615530)
chr4 (144-174)||(38345730-38345760)
chr4 (146-192)||(42697413-42697459)
chr4 (145-183)||(54412116-54412154)
chr4 (146-179)||(32628747-32628780)
chr4 (142-179)||(35124349-35124386)
chr4 (142-179)||(40699318-40699355)
chr4 (139-175)||(1617079-1617114)
chr4 (147-179)||(2702802-2702834)
chr4 (147-175)||(17222977-17223005)
chr4 (147-179)||(42611955-42611987)
chr4 (147-183)||(43136686-43136722)
[»] chr5 (29 HSPs)
chr5 (142-193)||(42706772-42706823)
chr5 (143-195)||(28357255-28357307)
chr5 (142-193)||(28625456-28625507)
chr5 (146-195)||(1942990-1943039)
chr5 (147-195)||(41534604-41534652)
chr5 (142-197)||(40452533-40452588)
chr5 (142-175)||(1576779-1576812)
chr5 (142-175)||(1608003-1608036)
chr5 (142-195)||(12986930-12986983)
chr5 (146-195)||(40696981-40697030)
chr5 (147-179)||(28970165-28970197)
chr5 (147-179)||(41125671-41125703)
chr5 (144-179)||(341954-341989)
chr5 (144-195)||(41419615-41419666)
chr5 (156-194)||(35083235-35083273)
chr5 (157-195)||(43268570-43268608)
chr5 (138-175)||(1868989-1869026)
chr5 (142-179)||(2577502-2577539)
chr5 (142-179)||(11163356-11163393)
chr5 (142-195)||(13060521-13060574)
chr5 (142-175)||(22573787-22573820)
chr5 (145-182)||(31637160-31637197)
chr5 (146-195)||(41059846-41059895)
chr5 (142-179)||(42851984-42852021)
chr5 (147-179)||(1372080-1372112)
chr5 (139-179)||(1576590-1576630)
chr5 (139-179)||(1608185-1608225)
chr5 (142-197)||(3977453-3977506)
chr5 (147-175)||(40697154-40697182)
[»] chr6 (12 HSPs)
chr6 (142-195)||(2034286-2034339)
chr6 (142-195)||(21025284-21025337)
chr6 (142-197)||(2027231-2027286)
chr6 (142-193)||(10755339-10755390)
chr6 (142-195)||(10874098-10874151)
chr6 (142-195)||(12817228-12817281)
chr6 (147-183)||(13429443-13429479)
chr6 (142-193)||(25430685-25430736)
chr6 (142-192)||(9202463-9202513)
chr6 (142-195)||(10054357-10054410)
chr6 (145-194)||(30534067-30534116)
chr6 (155-195)||(991340-991380)
[»] chr7 (17 HSPs)
chr7 (147-195)||(47511024-47511072)
chr7 (147-195)||(29378626-29378674)
chr7 (143-194)||(17944504-17944555)
chr7 (142-196)||(35713559-35713613)
chr7 (142-179)||(40629503-40629540)
chr7 (142-195)||(46743926-46743979)
chr7 (147-179)||(18837189-18837221)
chr7 (142-194)||(33204861-33204913)
chr7 (160-195)||(33288156-33288191)
chr7 (145-195)||(1054125-1054175)
chr7 (142-175)||(25908442-25908475)
chr7 (142-175)||(40629338-40629371)
chr7 (146-178)||(30181516-30181548)
chr7 (147-175)||(33287985-33288013)
chr7 (147-179)||(38372525-38372557)
chr7 (143-175)||(38372706-38372738)
chr7 (147-183)||(43818946-43818982)
[»] chr3 (17 HSPs)
chr3 (147-195)||(29270464-29270512)
chr3 (148-193)||(23555523-23555568)
chr3 (148-195)||(43079991-43080038)
chr3 (144-195)||(45331352-45331403)
chr3 (142-195)||(3870283-3870336)
chr3 (142-194)||(48597925-48597977)
chr3 (147-195)||(52021227-52021275)
chr3 (140-179)||(34707800-34707839)
chr3 (140-175)||(53261838-53261873)
chr3 (145-179)||(4974276-4974310)
chr3 (142-180)||(50540517-50540555)
chr3 (145-174)||(23555449-23555478)
chr3 (142-179)||(29270323-29270360)
chr3 (150-195)||(40240634-40240679)
chr3 (142-178)||(15444056-15444092)
chr3 (163-195)||(27769763-27769795)
chr3 (142-182)||(35480307-35480347)
[»] chr1 (18 HSPs)
chr1 (142-193)||(1005316-1005367)
chr1 (142-195)||(37329469-37329522)
chr1 (146-191)||(37431146-37431191)
chr1 (147-192)||(45267446-45267491)
chr1 (142-183)||(48819275-48819316)
chr1 (145-193)||(36178515-36178563)
chr1 (149-195)||(26936842-26936888)
chr1 (142-179)||(391130-391167)
chr1 (146-183)||(28870204-28870241)
chr1 (143-183)||(38781050-38781090)
chr1 (147-195)||(38781192-38781239)
chr1 (152-194)||(31378809-31378851)
chr1 (146-175)||(1565284-1565313)
chr1 (142-195)||(6337813-6337866)
chr1 (142-195)||(16889022-16889075)
chr1 (142-179)||(26946192-26946229)
chr1 (142-175)||(41196615-41196648)
chr1 (147-175)||(47413520-47413548)
[»] chr2 (19 HSPs)
chr2 (142-195)||(9140649-9140702)
chr2 (142-195)||(37419893-37419946)
chr2 (145-192)||(17317158-17317205)
chr2 (147-192)||(887393-887438)
chr2 (146-179)||(12223980-12224013)
chr2 (142-179)||(13097878-13097915)
chr2 (142-183)||(18276907-18276948)
chr2 (142-194)||(7028150-7028202)
chr2 (143-179)||(38215986-38216022)
chr2 (139-194)||(7041367-7041422)
chr2 (145-188)||(12238547-12238590)
chr2 (143-194)||(45163944-45163995)
chr2 (168-202)||(5903722-5903756)
chr2 (142-175)||(33321217-33321250)
chr2 (146-183)||(43796910-43796947)
chr2 (147-179)||(2790158-2790190)
chr2 (147-195)||(4004800-4004848)
chr2 (143-179)||(4090452-4090488)
chr2 (143-175)||(37409791-37409823)
[»] scaffold0332 (1 HSPs)
scaffold0332 (156-195)||(14803-14842)
[»] scaffold0022 (1 HSPs)
scaffold0022 (148-187)||(89318-89357)
[»] scaffold0071 (1 HSPs)
scaffold0071 (142-178)||(18099-18135)
[»] scaffold0004 (1 HSPs)
scaffold0004 (148-188)||(227688-227728)


Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 11461424 - 11461182
Alignment:
Q  15 atgaatgatgattaagttatatagcattatagctactactgtccaatttgatatgtatgataatttcattttcatcctagcttgaactttagcttgttcg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11461424 atgaatgatgattaagttatatagcattatagctactactgtccaatttgatatgtatgataatttcattttcatcctagcttgaactttagcttgttcg 11461325  T
Q  115 tgactgaatcctgattcctggacac----aaggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgcaaataataagctat 210  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11461324 tgactgaatcctgattcctggacacgagaaaggcccgtttggattggcttatttttgaccttatgcaaataaaaaagcttttatgcaaataataagctat 11461225  T
Q  211 tttttataagctcaaacggacatataactcagagaaaacttta 253  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  11461224 tttttataagctcaaacgggcatataactcggagaaaacttta 11461182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 18396781 - 18397023
Alignment:
Q  15 atgaatgatgattaagttatatagcattatagctactactgtccaatttgatatgtatgataatttcattttcatcctagcttgaactttagcttgttcg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18396781 atgaatgatgattaagttatatagcattatagctactactgtccaatttgatatgtatgataatttcattttcatcctagcttgaactttagcttgttcg 18396880  T
Q  115 tgactgaatcctgattcctggacac----aaggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgcaaataataagctat 210  Q
    |||| |||| ||||||||| |||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18396881 tgaccgaattctgattcctagacacgagataggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgcaaataataagctat 18396980  T
Q  211 tttttataagctcaaacggacatataactcagagaaaacttta 253  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  18396981 tttttataagctcaaacgggcatataacttggagaaaacttta 18397023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 11460723 - 11460807
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgcaaat-aataagctattttttataagctcaaa 226  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  11460723 gcccgtttggattcacttatttttgatcttatgcaaataaaaaagcttttatgcaaataaataagctatttttcataagctcaaa 11460807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 28879035 - 28879087
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  28879035 gcccgtttgaattggcttatttttgagcttatgcaaataaataagcttttatg 28879087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 35168356 - 35168408
Alignment:
Q  141 aggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  35168356 aggcccgtttggattggcttatttttgagcttatgtaaataaatcagctttta 35168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 34286673 - 34286620
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| |||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  34286673 ggcctgtttggattgacttatttttgagcttatgtaaataaataagcttttatg 34286620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 35453392 - 35453439
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||    
T  35453392 tttgaattggcttattttttagcttatgcaaataaataagcttttatg 35453439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 10213701 - 10213754
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||||||||||||||||| | |||||||||||||||| ||| |||||||    
T  10213701 ggcccatttggattggcttatttctaagcttatgcaaataaataagtttttatg 10213754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 32975666 - 32975715
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||||| | ||| ||||||||||||||||||||| ||||||||||    
T  32975666 ccgtttggatttgtttacttttgagcttatgcaaataaataagcttttat 32975715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 10298833 - 10298865
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||||||    
T  10298833 gcccgtttggattggcttatttttgagcttatg 10298865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 9130938 - 9130989
Alignment:
Q  144 cccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||| |||  ||||||||||||||||||||| || ||||||||    
T  9130938 cccgtttggattgacttgattttgagcttatgcaaataaataaacttttatg 9130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 32213122 - 32213079
Alignment:
Q  152 gattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||    
T  32213122 gattgacttatttttaagcttatgcaaataaataagcttttatg 32213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 10480026 - 10480056
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||||    
T  10480026 ccgtttggattggcttatttttgagcttatg 10480056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 30973954 - 30973988
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||| |||||||||||||    
T  30973954 ccgtttggattggcttattttagagcttatgcaaa 30973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 9781196 - 9781237
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagc 188  Q
    |||||||||| |||||||| ||||||||||||||||| ||||    
T  9781196 gtttggattgacttattttagagcttatgcaaataaataagc 9781237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 10299036 - 10298995
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||||||||||||||||| || ||||| |||||||||||||    
T  10299036 ggcccgtttggattggcttcttgttgagtttatgcaaataaa 10298995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 35286095 - 35286046
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttt 191  Q
    |||| |||| ||||||||||||||| ||||||| |||||||| |||||||    
T  35286095 ggcctgtttagattggcttattttttagcttatacaaataaataagcttt 35286046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 36907772 - 36907735
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  36907772 ggcccatttggattggcttattttagagcttatgcaaa 36907735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 41145505 - 41145456
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    |||||||||||| | |  ||||||||||||||||||||| ||||||||||    
T  41145505 ccgtttggattgacatcattttgagcttatgcaaataaataagcttttat 41145456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 11460828 - 11460796
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||| ||||||||||||||||||    
T  11460828 gcccgtttggattgacttatttttgagcttatg 11460796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 13265465 - 13265513
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||| ||| |||| ||| ||||||||||||| |||||||||||    
T  13265465 gtttggattgacttgttttcgagtttatgcaaataaataagcttttatg 13265513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 28280690 - 28280726
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  28280690 gtttggattagcttattttagagcttatgcaaataaa 28280726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 7148746 - 7148801
Alignment:
Q  140 aaggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7148746 aaggcccgtttggattggcttatttttgagcttatgcaaataaataagcttttatg 7148801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 9319224 - 9319162
Alignment:
Q  133 tggacacaaggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||    
T  9319224 tggacacagggcccgtttggtttggcttattttttagcttatgtaaataaataagcttttatg 9319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 825658 - 825708
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  825658 ggcctgtttggattggcttctttttgagcttatgcaaataaataagctttt 825708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 28663407 - 28663457
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  28663407 ccgtttggattgacttatttttgagcttatgcaaataaatgagcttttatg 28663457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 36740886 - 36740932
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  36740886 tttggattgacttatttttgagcttatgcaaataaataagcttttat 36740932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 52274231 - 52274177
Alignment:
Q  141 aggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  52274231 aggcctgtttgaattggcttatttttgagcttatgcaaataaataaacttttatg 52274177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 825849 - 825796
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||    
T  825849 ggcccgtttggattggctaattttttagcttatgcaaataaataagattttatg 825796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 488488 - 488441
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||    
T  488488 tttggattgacttatttttgagcttatgcaaataagtaagcttttatg 488441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 2141620 - 2141670
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||    
T  2141620 ccgtttgaattagcttattttagagcttatgcaaataaataagcttttatg 2141670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 23297400 - 23297437
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||| |||||||||||||||||||||||||||||||||    
T  23297400 ggcctgtttggattggcttatttttgagcttatgcaaa 23297437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 28074341 - 28074394
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||||||||| |||||||||  ||||||||||||||| |||||||||||    
T  28074341 ggcccatttggattgacttattttttcgcttatgcaaataaataagcttttatg 28074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 29877601 - 29877638
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||| |||||||||||||||||||||||||||||||||    
T  29877601 ggcctgtttggattggcttatttttgagcttatgcaaa 29877638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 34633361 - 34633398
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  34633361 ggcccgtttggattggcttattttttagcttatgcaaa 34633398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 34633552 - 34633504
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  34633552 gtttggattgacttatttttaagcttacgcaaataaataagcttttatg 34633504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 43699606 - 43699574
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||||||    
T  43699606 gcccgtttggattggcttatttttgagcttatg 43699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 48591530 - 48591482
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    |||| |||||||||||||| |||||||||||||||||| ||| ||||||    
T  48591530 cgttaggattggcttatttctgagcttatgcaaataaataagtttttat 48591482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 1374481 - 1374450
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||||||||||||||    
T  1374481 tttggattggcttatttttgagcttatgcaaa 1374450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 42153067 - 42153098
Alignment:
Q  142 ggcccgtttggattggcttatttttgagctta 173  Q
    ||||||||||||||||||||||||||||||||    
T  42153067 ggcccgtttggattggcttatttttgagctta 42153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 42697288 - 42697339
Alignment:
Q  142 ggcccgtttggattggcttatttttg-agcttatgcaaataaaaaagctttt 192  Q
    |||| ||||||||||||||||||||  |||||||||||||||| ||||||||    
T  42697288 ggcctgtttggattggcttatttttttagcttatgcaaataaataagctttt 42697339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 29615530 - 29615492
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  29615530 ccgtttggattcgcttatttttcagcttatgcaaataaa 29615492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 174
Target Start/End: Original strand, 38345730 - 38345760
Alignment:
Q  144 cccgtttggattggcttatttttgagcttat 174  Q
    |||||||||||||||||||||||||||||||    
T  38345730 cccgtttggattggcttatttttgagcttat 38345760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 42697459 - 42697413
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    |||||||||||| |||| |||||||||||||||||||| || |||||    
T  42697459 cgtttggattggtttatgtttgagcttatgcaaataaataacctttt 42697413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 54412154 - 54412116
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  54412154 ccgtttggattggcttattttttaacttatgcaaataaa 54412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 32628747 - 32628780
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||| ||||||||||||||||||||||    
T  32628747 cgtttggattgtcttatttttgagcttatgcaaa 32628780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 35124349 - 35124386
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  35124349 ggcccatttggattgacttatttttgagcttatgcaaa 35124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 40699318 - 40699355
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  40699318 ggcccgtctggattggcttattattgagcttatgcaaa 40699355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 1617079 - 1617114
Alignment:
Q  139 caaggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1617079 caaggcccgtttggattggctta-ttttgagcttatg 1617114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 2702834 - 2702802
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||| |||||||||||||    
T  2702834 gtttggattggcttattttagagcttatgcaaa 2702802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 17223005 - 17222977
Alignment:
Q  147 gtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||    
T  17223005 gtttggattggcttatttttgagcttatg 17222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 42611987 - 42611955
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||||||||| ||||||||||||    
T  42611987 gtttggattggcttattttttagcttatgcaaa 42611955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 43136722 - 43136686
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  43136722 gtttggattgacttatttttgagcttatgcgaataaa 43136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 42706772 - 42706823
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42706772 ggcccgtttggattggcttatttttgagcttatgcaaataaataagctttta 42706823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 28357307 - 28357255
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||||||    
T  28357307 gcccgtttgtattggcttattttttagcttatgcaaataaataagcttttatg 28357255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 28625456 - 28625507
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  28625456 ggcccgtttggattgacttattttttagcttatgcaaataaataagctttta 28625507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 1942990 - 1943039
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  1942990 cgtttggattggcttatttttgagcttatgcaagtaaataagtttttatg 1943039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 41534604 - 41534652
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||    
T  41534604 gtttggattggcttatttttcagattatgcaaataaataagcttttatg 41534652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 40452588 - 40452533
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgca 197  Q
    ||||||||| |||||||||||||| |||||||||||||  || |||||||||||||    
T  40452588 ggcccgtttcgattggcttattttcgagcttatgcaaaggaataagcttttatgca 40452533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 1576812 - 1576779
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||||||||||||||||||||||||||    
T  1576812 ggcccgtttggattggcttatttttgagcttatg 1576779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 1608003 - 1608036
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||||||||||||||||||||||||||    
T  1608003 ggcccgtttggattggcttatttttgagcttatg 1608036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 12986930 - 12986983
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||| |||| |||||| |||| ||||||||||| |||||||||||    
T  12986930 ggcccgtttggataggctaattttttagctaatgcaaataaataagcttttatg 12986983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 40696981 - 40697030
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||| |||| |||||||||||||||||||||||||| ||| |||||||    
T  40696981 cgtttgaattgacttatttttgagcttatgcaaataaataagtttttatg 40697030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 28970197 - 28970165
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||||||||||||||||||||||    
T  28970197 gtttggattggcttatttttgagcttatgcaaa 28970165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 41125671 - 41125703
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||||||||||||||||||||||    
T  41125671 gtttggattggcttatttttgagcttatgcaaa 41125703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 341954 - 341989
Alignment:
Q  144 cccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||| ||||||||||||||||||||||||    
T  341954 cccgtttggatcggcttatttttgagcttatgcaaa 341989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 41419666 - 41419615
Alignment:
Q  144 cccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||| |||| ||||||||||||| ||||||| ||| |||||||    
T  41419666 cccgtttggattgacttacttttgagcttatgaaaataaataagtttttatg 41419615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 35083235 - 35083273
Alignment:
Q  156 ggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    |||||||||||||||||||||||||||| || |||||||    
T  35083235 ggcttatttttgagcttatgcaaataaataaacttttat 35083273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 43268570 - 43268608
Alignment:
Q  157 gcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  43268570 gcttatttttgagcttatgaaaataaataagcttttatg 43268608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 1869026 - 1868989
Alignment:
Q  138 acaaggcccgtttggattggcttatttttgagcttatg 175  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  1869026 acaacgcccgtttggattggcttattttcgagcttatg 1868989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 2577539 - 2577502
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  2577539 ggcccgtttggattggcttattttttagcttatccaaa 2577502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 11163393 - 11163356
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  11163393 ggcccgtttggattgacttattttttagcttatgcaaa 11163356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 13060521 - 13060574
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| |||||||| |||| |||||| |||| ||||||||||| |||||||||||    
T  13060521 ggcctgtttggataggctaattttttagctaatgcaaataaataagcttttatg 13060574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 22573820 - 22573787
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||| ||||||||||||||||||||||||||||    
T  22573820 ggcccatttggattggcttatttttgagcttatg 22573787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 31637197 - 31637160
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataa 182  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  31637197 ccgtttggattgacttatttatgagcttatgcaaataa 31637160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 41059895 - 41059846
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||| ||||||||| |||| |||||||||||| ||| |||||||||||    
T  41059895 cgtttgtattggcttactttttagcttatgcaaacaaataagcttttatg 41059846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 42851984 - 42852021
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  42851984 ggcccgttcggattggcttatttttgggcttatgcaaa 42852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 1372112 - 1372080
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||| ||||||||||||||||||||||    
T  1372112 gtttggattgacttatttttgagcttatgcaaa 1372080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 1576590 - 1576630
Alignment:
Q  139 caaggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  1576590 caaggtccgtttggattggcttattcttgggcttatgcaaa 1576630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 1608225 - 1608185
Alignment:
Q  139 caaggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  1608225 caaggtccgtttggattggcttattcttgggcttatgcaaa 1608185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 3977453 - 3977506
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgca 197  Q
    |||||||||||| |||||||||||||||||  |||||||||| || ||||| ||||    
T  3977453 ggcccgtttggactggcttatttttgagct--tgcaaataaataaacttttgtgca 3977506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 40697182 - 40697154
Alignment:
Q  147 gtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||    
T  40697182 gtttggattggcttatttttgagcttatg 40697154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 2034339 - 2034286
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  2034339 ggcccgtttggattggcttgtttttgagcttatgcaaataaataagcttttatg 2034286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 21025337 - 21025284
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  21025337 ggcccgtttggattggctaattttttagcttatgcaaataaataagcttttatg 21025284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 2027286 - 2027231
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgca 197  Q
    ||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||    
T  2027286 ggcccgtttggattggcttgttttccagcttatgcaaataaataagcttttatgca 2027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 10755390 - 10755339
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  10755390 ggcctgtttggattggcttattttttagcttatgcaaataaataagctttta 10755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 10874151 - 10874098
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| ||||||| || ||||||||| |||||||||||||||| |||||||||||    
T  10874151 ggcctgtttggaatgacttattttttagcttatgcaaataaataagcttttatg 10874098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 12817281 - 12817228
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||| |||||||||||| ||||||| |||||||| | |||||||||    
T  12817281 ggcccgtttggactggcttatttttaagcttatacaaataaatatgcttttatg 12817228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 13429443 - 13429479
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13429443 gtttggattggcatatttttgagcttatgcaaataaa 13429479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 25430685 - 25430736
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    ||||||||||||||||||||||||  |||||||||||| ||| || ||||||    
T  25430685 ggcccgtttggattggcttattttgtagcttatgcaaagaaataaactttta 25430736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 9202513 - 9202463
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    |||| |||||| |||||||| |||||||||||||||||| || ||||||||    
T  9202513 ggcctgtttggtttggcttaattttgagcttatgcaaatgaataagctttt 9202463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 10054357 - 10054410
Alignment:
Q  142 ggcccgtttggatt-ggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  10054357 ggcccgtttggatcaggcttatttt-gagcttatgcaaataaataagcttttatg 10054410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 30534116 - 30534067
Alignment:
Q  145 ccgtttggatt-ggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  30534116 ccgtttggattaggcttatttt-gagcttatgcaaataaataagcttttat 30534067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 991380 - 991340
Alignment:
Q  155 tggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||| |||||| |||| |||||||||||    
T  991380 tggcttatttttgagctcatgcaagtaaataagcttttatg 991340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 47511024 - 47511072
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47511024 gtttggattggcttatttttgagcttatgcaaataaataagcttttatg 47511072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 29378626 - 29378674
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  29378626 gtttggattggcttatctttgagcttatgcaaataaataagcttttatg 29378674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 17944504 - 17944555
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17944504 gcccatttggattggctaatttttgagcttatgcaaataaataagcttttat 17944555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 35713559 - 35713613
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatgc 196  Q
    |||| ||||||||||||||||| || |||||||||||||||| || |||||||||    
T  35713559 ggcctgtttggattggcttattcttaagcttatgcaaataaataaccttttatgc 35713613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 40629540 - 40629503
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40629540 ggcctgtttggattggcttatttttgagcttatgcaaa 40629503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 46743926 - 46743979
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| ||||||||||||||| ||||||||| ||||||||||| ||| |||||||    
T  46743926 ggcctgtttggattggcttacttttgagctcatgcaaataaataagattttatg 46743979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 18837189 - 18837221
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||||||||||||||||||||||    
T  18837189 gtttggattggcttatttttgagcttatgcaaa 18837221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 33204861 - 33204913
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||| ||| |  ||||||||||||||||||||||||| ||||||||||    
T  33204861 ggcccgtttcgatcgatttatttttgagcttatgcaaataaataagcttttat 33204913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 33288191 - 33288156
Alignment:
Q  160 tatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||||||||| |||||||||||    
T  33288191 tatttttgagcttatgcaaataaataagcttttatg 33288156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 1054175 - 1054125
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||| |||  |||| ||||||||||||||||||||| |||||||||||    
T  1054175 ccgtttgtattcacttagttttgagcttatgcaaataaataagcttttatg 1054125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 25908475 - 25908442
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||| |||||    
T  25908475 ggcccgtttggattggcttatttttgaggttatg 25908442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 40629338 - 40629371
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    |||| |||||||||||||||||||||||||||||    
T  40629338 ggcctgtttggattggcttatttttgagcttatg 40629371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 30181516 - 30181548
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaa 178  Q
    ||||||||||| |||||||||||||||||||||    
T  30181516 cgtttggattgacttatttttgagcttatgcaa 30181548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 33287985 - 33288013
Alignment:
Q  147 gtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||    
T  33287985 gtttggattggcttatttttgagcttatg 33288013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 38372525 - 38372557
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||| ||||||||||||||||||||||    
T  38372525 gtttggattgacttatttttgagcttatgcaaa 38372557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 38372738 - 38372706
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||||||| |||||||||||||||||    
T  38372738 gcccgtttggattgggttatttttgagcttatg 38372706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 43818982 - 43818946
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  43818982 gtttggattagcttattttagagcttatgcaaataaa 43818946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 29270512 - 29270464
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  29270512 gtttggattggcttattttttagcttatgcaaataaataagcttttatg 29270464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 23555568 - 23555523
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  23555568 tttgtattggcttatttttgagcttatgcaaataaataagctttta 23555523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 43080038 - 43079991
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  43080038 tttggattgtcttattttttagcttatgcaaataaataagcttttatg 43079991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 45331403 - 45331352
Alignment:
Q  144 cccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||||||| |||||||| ||||||| || ||||||||    
T  45331403 cccgtttggattggcttattttttagcttatgtaaataaataaccttttatg 45331352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 3870336 - 3870283
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||    
T  3870336 ggcccatttggattggcttattatcgagcttatgcaaaaaaataagcttttatg 3870283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48597977 - 48597925
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||||||||||||||||||| ||| |||||||||| | || |||||||    
T  48597977 ggcccgtttggattggcttattttttagcctatgcaaatacataaacttttat 48597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 52021227 - 52021275
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||| |||||| |||||||||||||||| | |||||||||    
T  52021227 gtttggattggctcattttttagcttatgcaaataaatatgcttttatg 52021275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 34707839 - 34707800
Alignment:
Q  140 aaggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  34707839 aaggcctgtttggattgacttatttttgagcttatgcaaa 34707800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 53261873 - 53261838
Alignment:
Q  140 aaggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||| ||||||||||||||||||||||||||||    
T  53261873 aaggcccatttggattggcttatttttgagcttatg 53261838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 4974276 - 4974310
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||| |||||||||||||    
T  4974276 ccgtttggattggcttattttagagcttatgcaaa 4974310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 50540517 - 50540555
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaat 180  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  50540517 ggcccctttggattgtcttatttttgagcttatgcaaat 50540555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 23555449 - 23555478
Alignment:
Q  145 ccgtttggattggcttatttttgagcttat 174  Q
    ||||||||||||||||||||||||||||||    
T  23555449 ccgtttggattggcttatttttgagcttat 23555478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 29270323 - 29270360
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  29270323 ggcctgtttggattgacttatttttgagcttatgcaaa 29270360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 40240679 - 40240634
Alignment:
Q  150 tggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||  ||||| |||||||||||||||| |||||||||||    
T  40240679 tggattggctggttttttagcttatgcaaataaagaagcttttatg 40240634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 15444092 - 15444056
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaa 178  Q
    |||||| |||||||| |||||||||||||||||||||    
T  15444092 ggcccgattggattgacttatttttgagcttatgcaa 15444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 27769795 - 27769763
Alignment:
Q  163 ttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||||| |||||||||||    
T  27769795 ttttgagcttatgcaaataaataagcttttatg 27769763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 35480307 - 35480347
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataa 182  Q
    |||| |||||||||| |||||||||||||||||| ||||||    
T  35480307 ggcctgtttggattgacttatttttgagcttatgaaaataa 35480347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 1005316 - 1005367
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  1005316 ggcccgtttgaattggcttatttttaagcttatgcaaataaataagctttta 1005367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 37329522 - 37329469
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||| |||||||||||||| |||||||||||||  ||||||||||    
T  37329522 ggcccgtttggataggcttatttttgagattatgcaaataaatgagcttttatg 37329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 37431146 - 37431191
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaaaaagcttt 191  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  37431146 cgtttggattggcttatttttgagcttgtgcaaataaataagcttt 37431191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 45267446 - 45267491
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  45267446 gtttggattgacttatttttgagcttatgcaaataaataagctttt 45267491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 48819275 - 48819316
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  48819275 ggcccatttggattggcttatttttgagcttatgcaaataaa 48819316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 36178515 - 36178563
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagctttta 193  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  36178515 ccgtttggattgacttacttttgagcttatgcaaataaataagctttta 36178563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 26936842 - 26936888
Alignment:
Q  149 ttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||    
T  26936842 ttggattggcttattttttagcttatgcaaataaataagcttctatg 26936888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 391130 - 391167
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||||||||||||||||| |||||||||    
T  391130 ggcccgtttggattggcttatttttgaggttatgcaaa 391167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 28870204 - 28870241
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  28870204 cgtttagattggcttatttttgagcttatgcaaataaa 28870241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 38781050 - 38781090
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  38781050 gcccattttgattggcttatttttgagcttatgcaaataaa 38781090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 38781239 - 38781192
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  38781239 gtttggattggcttatttttgag-ttatgcaaataaatatgcttttatg 38781192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 31378851 - 31378809
Alignment:
Q  152 gattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||    
T  31378851 gattgacttatttttaagcttatgcaaataaataagcttttat 31378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 175
Target Start/End: Original strand, 1565284 - 1565313
Alignment:
Q  146 cgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||||||||||||||||||||||    
T  1565284 cgtttggattggcttatttttgagcttatg 1565313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 6337866 - 6337813
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||| ||||| |||||||| ||||||||| ||||||| |||||||||||    
T  6337866 ggcccatttcgattgacttattttagagcttatgtaaataaataagcttttatg 6337813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 16889075 - 16889022
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| ||||||||||||||||| || |||||  ||||||||| |||||||||||    
T  16889075 ggcctgtttggattggcttattgtttagcttgcgcaaataaataagcttttatg 16889022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 26946229 - 26946192
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  26946229 ggcccatttggattgacttatttttgagcttatgcaaa 26946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 41196615 - 41196648
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||| ||||||||||||||||||||||||||||    
T  41196615 ggcccatttggattggcttatttttgagcttatg 41196648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 47413548 - 47413520
Alignment:
Q  147 gtttggattggcttatttttgagcttatg 175  Q
    |||||||||||||||||||||||||||||    
T  47413548 gtttggattggcttatttttgagcttatg 47413520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 9140649 - 9140702
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||| |||||||||||||||||||| ||||| || ||||||||    
T  9140649 ggcccgtttggattgacttatttttgagcttatgcatataaataaacttttatg 9140702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 37419893 - 37419946
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  37419893 ggcccatttggattgacttaattttgagcttatgcaaataaataagcttttatg 37419946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 17317158 - 17317205
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  17317158 ccgtttggattgacttatttttgagcttatgtaaataaataagctttt 17317205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 887393 - 887438
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagctttt 192  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||    
T  887393 gtttggattggattatttctgagcttatgcaaataaataagctttt 887438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 12224013 - 12223980
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaa 179  Q
    ||||||||||||||||||||||||||||||||||    
T  12224013 cgtttggattggcttatttttgagcttatgcaaa 12223980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 13097878 - 13097915
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13097878 ggcctgtttggattggcttatttttgagcttatgcaaa 13097915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 18276907 - 18276948
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  18276907 ggcccgcttggattgacttatttttgagcttatgcaaataaa 18276948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7028150 - 7028202
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    |||||||||| ||||  ||||||||||||||||||||||||| || |||||||    
T  7028150 ggcccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttat 7028202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 38215986 - 38216022
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||||||||||| ||||||||||||||||||||||    
T  38215986 gcccgtttggattgacttatttttgagcttatgcaaa 38216022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 7041367 - 7041422
Alignment:
Q  139 caaggcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||| ||||||| ||||  ||||||||||||||||||||||||| || |||||||    
T  7041367 caagggccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttat 7041422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 12238590 - 12238547
Alignment:
Q  145 ccgtttggattggcttatttttgagcttatgcaaataaaaaagc 188  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||    
T  12238590 ccgttgggattggcttattttagagcttatgcaaataaataagc 12238547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 45163995 - 45163944
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaataaaaaagcttttat 194  Q
    ||||||||||||||  |||||||| |||||||||||| ||| ||||||||||    
T  45163995 gcccgtttggattgagttattttttagcttatgcaaacaaataagcttttat 45163944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 5903756 - 5903722
Alignment:
Q  168 agcttatgcaaataaaaaagcttttatgcaaataa 202  Q
    |||||||||||||||| ||||||||||||||||||    
T  5903756 agcttatgcaaataaataagcttttatgcaaataa 5903722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 33321217 - 33321250
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatg 175  Q
    ||||| ||||||||||||||||||||||||||||    
T  33321217 ggcccatttggattggcttatttttgagcttatg 33321250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 43796910 - 43796947
Alignment:
Q  146 cgtttggattggcttatttttgagcttatgcaaataaa 183  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  43796910 cgtttggattggcttattttagagcttatgtaaataaa 43796947  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 2790190 - 2790158
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||| ||||||||||||||||||||||||||    
T  2790190 gtttgggttggcttatttttgagcttatgcaaa 2790158  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 4004800 - 4004848
Alignment:
Q  147 gtttggattggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    |||| ||||| ||||||||||| |||||||||||||| || ||||||||    
T  4004800 gtttagattgccttatttttgaacttatgcaaataaataatcttttatg 4004848  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 4090452 - 4090488
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatgcaaa 179  Q
    |||||| || |||||||||||||||||||||||||||    
T  4090452 gcccgtctgaattggcttatttttgagcttatgcaaa 4090488  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 37409823 - 37409791
Alignment:
Q  143 gcccgtttggattggcttatttttgagcttatg 175  Q
    ||||||||||| |||||||||||||||||||||    
T  37409823 gcccgtttggactggcttatttttgagcttatg 37409791  T

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Target: scaffold0332 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 14842 - 14803
Alignment:
Q  156 ggcttatttttgagcttatgcaaataaaaaagcttttatg 195  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  14842 ggcttatttttgagcttatacaaataaataagcttttatg 14803  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 89357 - 89318
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaag 187  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  89357 tttggattgacttatttttaagcttatgcaaataaaaaag 89318  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 18099 - 18135
Alignment:
Q  142 ggcccgtttggattggcttatttttgagcttatgcaa 178  Q
    |||||| |||||||| |||||||||||||||||||||    
T  18099 ggcccgattggattgacttatttttgagcttatgcaa 18135  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 227688 - 227728
Alignment:
Q  148 tttggattggcttatttttgagcttatgcaaataaaaaagc 188  Q
    |||||||||||||||||| |||||||||| |||||| ||||    
T  227688 tttggattggcttattttagagcttatgcgaataaataagc 227728  T

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