View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3065_low_1 (Length: 2194)

Name: NF3065_low_1
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3065_low_1
NF3065_low_1
[»] chr3 (58 HSPs)
chr3 (1401-2178)||(46770016-46770793)
chr3 (575-1368)||(46769179-46769982)
chr3 (22-509)||(46768615-46769113)
chr3 (1727-1831)||(46762478-46762582)
chr3 (1899-1973)||(27418768-27418840)
chr3 (1899-1973)||(34673348-34673422)
chr3 (1899-1946)||(36227873-36227920)
chr3 (1867-1973)||(46969902-46970008)
chr3 (1899-1959)||(6125852-6125913)
chr3 (1878-1926)||(27027333-27027381)
chr3 (1899-1986)||(39328494-39328581)
chr3 (1867-1926)||(3283385-3283444)
chr3 (1899-1973)||(8674618-8674692)
chr3 (1899-1973)||(52089124-52089199)
chr3 (1899-1973)||(54253799-54253873)
chr3 (1880-1926)||(42092808-42092854)
chr3 (1880-1926)||(50090943-50090989)
chr3 (1880-1926)||(54160389-54160435)
chr3 (1877-1926)||(8674534-8674583)
chr3 (1869-1926)||(39328402-39328459)
chr3 (1882-1926)||(34673581-34673625)
chr3 (1899-1973)||(3283276-3283350)
chr3 (1899-1973)||(41355495-41355569)
chr3 (1899-1973)||(52945651-52945725)
chr3 (1880-1926)||(6125771-6125817)
chr3 (1880-1926)||(21395974-21396020)
chr3 (1880-1926)||(36418714-36418760)
chr3 (1899-1971)||(35280490-35280562)
chr3 (1899-1971)||(38101195-38101267)
chr3 (1054-1122)||(46774086-46774154)
chr3 (1866-1926)||(54253908-54253968)
chr3 (1899-1982)||(54411787-54411870)
chr3 (1899-1973)||(4126055-4126129)
chr3 (1867-1926)||(5232730-5232789)
chr3 (1899-1973)||(11238748-11238822)
chr3 (1899-1973)||(13700254-13700328)
chr3 (1867-1926)||(45408234-45408293)
chr3 (1899-1973)||(45408328-45408402)
chr3 (1899-1973)||(50090834-50090908)
chr3 (1899-1984)||(54160470-54160553)
chr3 (1867-1922)||(54411909-54411963)
chr3 (1880-1926)||(37702683-37702729)
chr3 (2116-2158)||(46762865-46762907)
chr3 (1899-1973)||(19855546-19855617)
chr3 (1899-1970)||(37702577-37702648)
chr3 (1887-1926)||(8351060-8351099)
chr3 (1899-1973)||(20513035-20513109)
chr3 (1904-1935)||(26103748-26103779)
chr3 (1899-1973)||(27037987-27038061)
chr3 (2030-2105)||(46762702-46762777)
chr3 (1899-1973)||(51614613-51614687)
chr3 (1904-1971)||(53581551-53581618)
chr3 (1880-1926)||(19855465-19855511)
chr3 (1880-1926)||(35711941-35711987)
chr3 (1899-1971)||(36418795-36418867)
chr3 (1904-1937)||(50801600-50801633)
chr3 (1904-1937)||(50874247-50874280)
chr3 (1904-1937)||(53467484-53467517)
[»] chr7 (67 HSPs)
chr7 (1899-1973)||(27131078-27131152)
chr7 (1880-1973)||(32392237-32392331)
chr7 (1867-1973)||(7596879-7596984)
chr7 (1899-1973)||(48709035-48709109)
chr7 (1899-1970)||(20568340-20568411)
chr7 (1881-1973)||(28333763-28333855)
chr7 (1899-1982)||(3875220-3875302)
chr7 (1899-1973)||(21993551-21993625)
chr7 (1867-1926)||(27130984-27131043)
chr7 (1899-1973)||(41378371-41378445)
chr7 (1901-1971)||(8953290-8953360)
chr7 (1867-1926)||(5995162-5995221)
chr7 (1899-1973)||(26927965-26928039)
chr7 (1899-1973)||(41585879-41585953)
chr7 (1899-1957)||(24251910-24251968)
chr7 (1899-1973)||(27946823-27946897)
chr7 (1899-1973)||(38368241-38368315)
chr7 (1899-1960)||(42373471-42373532)
chr7 (1878-1926)||(27946932-27946980)
chr7 (1880-1935)||(48624983-48625039)
chr7 (1899-1973)||(5995052-5995127)
chr7 (1899-1973)||(35221665-35221739)
chr7 (1899-1973)||(35983188-35983262)
chr7 (1899-1973)||(36004600-36004674)
chr7 (1899-1973)||(41037206-41037280)
chr7 (1899-1973)||(48227231-48227305)
chr7 (1880-1926)||(3203400-3203446)
chr7 (1881-1931)||(20417976-20418026)
chr7 (1905-1969)||(9522470-9522534)
chr7 (1881-1973)||(20009181-20009273)
chr7 (1881-1926)||(21993471-21993516)
chr7 (1880-1925)||(31953159-31953204)
chr7 (1899-1971)||(3407148-3407220)
chr7 (1878-1926)||(35221779-35221827)
chr7 (1880-1924)||(43077604-43077648)
chr7 (1899-1973)||(3203287-3203365)
chr7 (1865-1926)||(3961165-3961223)
chr7 (1899-1982)||(12362823-12362906)
chr7 (1867-1926)||(14313939-14313998)
chr7 (1867-1926)||(20568246-20568304)
chr7 (1899-1973)||(24611497-24611571)
chr7 (1867-1921)||(31853805-31853857)
chr7 (1899-1973)||(31953240-31953314)
chr7 (1867-1926)||(35983094-35983153)
chr7 (1867-1926)||(36004506-36004565)
chr7 (1867-1926)||(45099958-45100017)
chr7 (1899-1973)||(45100052-45100126)
chr7 (1902-1971)||(3350016-3350085)
chr7 (1867-1925)||(9522573-9522630)
chr7 (1927-1973)||(31853769-31853815)
chr7 (1880-1926)||(42373567-42373613)
chr7 (1880-1925)||(46003843-46003888)
chr7 (1878-1926)||(12362941-12362989)
chr7 (1899-1973)||(3961258-3961332)
chr7 (1899-1973)||(14656535-14656609)
chr7 (1904-1971)||(15957340-15957407)
chr7 (1904-1971)||(27168379-27168446)
chr7 (1905-1971)||(938898-938964)
chr7 (1880-1926)||(3875109-3875155)
chr7 (1884-1922)||(38368164-38368202)
chr7 (1880-1926)||(41378480-41378526)
chr7 (1880-1922)||(48227344-48227386)
chr7 (1904-1937)||(2509446-2509479)
chr7 (1904-1937)||(2936677-2936710)
chr7 (1904-1937)||(11766158-11766191)
chr7 (1877-1926)||(28059334-28059382)
chr7 (1904-1937)||(28912119-28912152)
[»] scaffold0112 (2 HSPs)
scaffold0112 (1867-1975)||(24582-24690)
scaffold0112 (1879-1971)||(35902-35994)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1880-1959)||(88185-88264)
scaffold0003 (1899-1971)||(103249-103321)
scaffold0003 (1883-1926)||(103356-103399)
[»] chr2 (49 HSPs)
chr2 (1883-1973)||(27175470-27175560)
chr2 (1880-1973)||(10862577-10862670)
chr2 (1899-1973)||(34125546-34125620)
chr2 (1899-1971)||(5601711-5601783)
chr2 (1867-1937)||(6231208-6231279)
chr2 (1867-1973)||(29511835-29511942)
chr2 (1867-1973)||(34450304-34450409)
chr2 (1899-1973)||(4206514-4206588)
chr2 (1899-1973)||(25880661-25880735)
chr2 (1863-1926)||(4206413-4206476)
chr2 (1867-1926)||(18924646-18924705)
chr2 (1867-1973)||(27097021-27097127)
chr2 (1867-1973)||(36779802-36779910)
chr2 (1904-1973)||(39961536-39961605)
chr2 (1899-1973)||(9548208-9548282)
chr2 (1899-1973)||(29471632-29471706)
chr2 (1899-1973)||(12895410-12895484)
chr2 (1867-1973)||(14747356-14747462)
chr2 (1899-1973)||(24314296-24314370)
chr2 (1867-1926)||(29471741-29471800)
chr2 (1867-1926)||(33740222-33740281)
chr2 (1899-1982)||(21950721-21950804)
chr2 (1867-1926)||(9548317-9548376)
chr2 (1899-1973)||(10664689-10664763)
chr2 (1867-1926)||(10664798-10664857)
chr2 (1899-1973)||(12725715-12725789)
chr2 (1899-1973)||(18924537-18924611)
chr2 (1867-1926)||(25810512-25810570)
chr2 (1880-1926)||(16719834-16719880)
chr2 (1867-1929)||(33471418-33471480)
chr2 (1899-1971)||(5534289-5534361)
chr2 (1899-1971)||(39089103-39089175)
chr2 (1899-1982)||(42090496-42090579)
chr2 (1879-1926)||(12725824-12725871)
chr2 (1877-1924)||(39435040-39435087)
chr2 (1871-1926)||(42090406-42090461)
chr2 (1880-1926)||(1750025-1750071)
chr2 (1880-1926)||(25880576-25880622)
chr2 (1899-1971)||(44539843-44539915)
chr2 (1878-1926)||(39961645-39961693)
chr2 (1904-1971)||(11675278-11675345)
chr2 (1867-1926)||(24314202-24314261)
chr2 (1904-1971)||(34082692-34082759)
chr2 (598-637)||(38126973-38127012)
chr2 (1867-1926)||(39089210-39089269)
chr2 (1899-1960)||(1749929-1749990)
chr2 (1899-1943)||(2969675-2969720)
chr2 (1904-1937)||(29512111-29512144)
chr2 (1881-1926)||(44539951-44539996)
[»] chr5 (50 HSPs)
chr5 (1880-1973)||(23129600-23129693)
chr5 (1899-1971)||(27365797-27365869)
chr5 (1867-1973)||(19863111-19863217)
chr5 (1900-1973)||(19995358-19995431)
chr5 (1899-1971)||(13960382-13960455)
chr5 (1899-1971)||(16490924-16490996)
chr5 (1899-1962)||(5497757-5497820)
chr5 (1899-1973)||(17689342-17689416)
chr5 (1880-1926)||(16273677-16273723)
chr5 (1880-1926)||(21913858-21913904)
chr5 (1899-1982)||(18015724-18015807)
chr5 (1867-1973)||(16490721-16490826)
chr5 (1867-1926)||(19323812-19323871)
chr5 (1899-1973)||(23204458-23204532)
chr5 (1875-1926)||(27365711-27365762)
chr5 (1909-1973)||(25593283-25593347)
chr5 (1899-1973)||(9741807-9741881)
chr5 (1867-1926)||(20269221-20269280)
chr5 (1867-1926)||(23204364-23204423)
chr5 (1867-1926)||(28038316-28038375)
chr5 (1899-1973)||(28813061-28813135)
chr5 (1867-1926)||(37172504-37172563)
chr5 (1867-1925)||(31056485-31056543)
chr5 (1880-1926)||(38758732-38758778)
chr5 (1867-1931)||(15388217-15388281)
chr5 (1899-1982)||(38293472-38293555)
chr5 (1867-1926)||(18015631-18015689)
chr5 (1899-1973)||(19323703-19323777)
chr5 (1887-1926)||(31042635-31042674)
chr5 (1867-1926)||(33429254-33429313)
chr5 (1899-1973)||(37172395-37172469)
chr5 (1899-1973)||(38758624-38758698)
chr5 (1880-1926)||(13960489-13960535)
chr5 (1899-1945)||(31042554-31042600)
chr5 (1899-1945)||(31056403-31056449)
chr5 (1904-1971)||(2695223-2695290)
chr5 (1899-1946)||(19858480-19858527)
chr5 (1880-1926)||(9741726-9741772)
chr5 (1905-1971)||(14369754-14369820)
chr5 (1880-1926)||(16994251-16994297)
chr5 (1899-1958)||(19325055-19325115)
chr5 (1899-1971)||(26730310-26730381)
chr5 (1913-1943)||(37468700-37468730)
chr5 (1904-1937)||(17421715-17421748)
chr5 (1904-1937)||(22701871-22701904)
chr5 (1904-1937)||(25912170-25912203)
chr5 (1904-1937)||(31240372-31240405)
chr5 (1904-1937)||(31752137-31752170)
chr5 (1904-1937)||(33832737-33832770)
chr5 (1904-1937)||(39548968-39549001)
[»] chr8 (60 HSPs)
chr8 (1867-1973)||(3210868-3210974)
chr8 (1899-1973)||(12176207-12176281)
chr8 (1899-1973)||(12420635-12420709)
chr8 (1867-1973)||(16645481-16645587)
chr8 (1899-1982)||(42806293-42806376)
chr8 (1899-1971)||(1271025-1271097)
chr8 (1867-1926)||(10078292-10078351)
chr8 (1880-1937)||(39589974-39590032)
chr8 (1899-1948)||(40301373-40301422)
chr8 (1867-1926)||(1271136-1271195)
chr8 (1879-1926)||(16784330-16784377)
chr8 (1899-1973)||(16930805-16930879)
chr8 (1899-1973)||(19922592-19922666)
chr8 (1899-1973)||(23472595-23472669)
chr8 (1867-1926)||(30774113-30774172)
chr8 (1867-1926)||(42806197-42806256)
chr8 (1899-1972)||(22812324-22812397)
chr8 (1880-1926)||(38498360-38498406)
chr8 (1899-1971)||(26912325-26912397)
chr8 (1899-1971)||(33568071-33568143)
chr8 (1899-1982)||(9478793-9478876)
chr8 (1882-1926)||(14371614-14371658)
chr8 (1867-1926)||(9479402-9479461)
chr8 (1899-1961)||(12295179-12295241)
chr8 (1871-1926)||(44873904-44873959)
chr8 (1880-1926)||(12176316-12176362)
chr8 (1880-1926)||(12420744-12420790)
chr8 (1899-1959)||(38498265-38498325)
chr8 (1880-1920)||(23472515-23472555)
chr8 (1899-1973)||(253951-254025)
chr8 (1899-1973)||(661833-661907)
chr8 (1899-1973)||(10078386-10078457)
chr8 (1904-1971)||(27545888-27545955)
chr8 (1899-1973)||(28539245-28539319)
chr8 (1880-1931)||(38071134-38071185)
chr8 (1887-1926)||(39077393-39077432)
chr8 (1880-1926)||(16930914-16930960)
chr8 (1881-1926)||(12295276-12295321)
chr8 (1881-1926)||(13327039-13327084)
chr8 (1899-1982)||(41624643-41624726)
chr8 (1879-1926)||(5224299-5224346)
chr8 (1899-1946)||(13326958-13327005)
chr8 (1867-1926)||(26912432-26912491)
chr8 (1904-1971)||(29125711-29125778)
chr8 (1899-1937)||(39077319-39077358)
chr8 (1879-1926)||(40067662-40067709)
chr8 (1879-1926)||(44473747-44473794)
chr8 (1908-1973)||(847640-847705)
chr8 (1899-1960)||(5224381-5224441)
chr8 (1913-1959)||(14819297-14819343)
chr8 (1905-1971)||(26042942-26043008)
chr8 (1869-1926)||(1983588-1983645)
chr8 (1904-1937)||(13269269-13269302)
chr8 (1904-1937)||(13290624-13290657)
chr8 (1899-1955)||(14041412-14041468)
chr8 (1904-1937)||(25127999-25128032)
chr8 (1899-1971)||(28969103-28969175)
chr8 (1904-1937)||(30633100-30633133)
chr8 (1899-1971)||(38092183-38092255)
chr8 (1899-1971)||(40067555-40067627)
[»] chr4 (61 HSPs)
chr4 (1899-1973)||(43837694-43837768)
chr4 (1899-1982)||(47960290-47960373)
chr4 (1899-1973)||(53773689-53773764)
chr4 (1899-1947)||(26889493-26889541)
chr4 (1902-1973)||(34041196-34041267)
chr4 (1899-1982)||(42434224-42434307)
chr4 (1867-1973)||(7645886-7645991)
chr4 (1899-1973)||(34728224-34728298)
chr4 (1867-1973)||(42560130-42560235)
chr4 (1899-1975)||(19329441-19329517)
chr4 (1865-1926)||(20835692-20835753)
chr4 (1899-1973)||(11020352-11020426)
chr4 (1899-1973)||(27907071-27907145)
chr4 (1899-1973)||(32626066-32626140)
chr4 (1899-1973)||(32868066-32868140)
chr4 (1867-1922)||(33117501-33117556)
chr4 (1899-1973)||(51682563-51682637)
chr4 (1899-1973)||(51702538-51702612)
chr4 (1880-1927)||(54158117-54158164)
chr4 (1901-1971)||(7603629-7603699)
chr4 (1880-1926)||(34728333-34728379)
chr4 (1867-1926)||(5975643-5975702)
chr4 (1899-1973)||(6137341-6137415)
chr4 (1899-1969)||(6944568-6944638)
chr4 (1867-1926)||(32090076-32090135)
chr4 (1867-1926)||(38427182-38427241)
chr4 (1899-1973)||(40875293-40875367)
chr4 (1899-1973)||(52344575-52344650)
chr4 (1899-1973)||(849241-849315)
chr4 (1880-1926)||(6137260-6137306)
chr4 (1880-1926)||(43837803-43837849)
chr4 (1880-1926)||(48860836-48860882)
chr4 (1899-1971)||(20503514-20503586)
chr4 (1881-1926)||(38963355-38963400)
chr4 (1899-1982)||(32089958-32090041)
chr4 (1899-1973)||(13387065-13387139)
chr4 (1899-1973)||(20835788-20835862)
chr4 (1899-1973)||(28589241-28589315)
chr4 (1878-1925)||(34041306-34041353)
chr4 (1899-1961)||(38427085-38427147)
chr4 (1899-1973)||(40479928-40480002)
chr4 (1887-1926)||(47960408-47960447)
chr4 (1867-1926)||(51682672-51682731)
chr4 (1880-1926)||(13386984-13387030)
chr4 (1880-1926)||(22254223-22254269)
chr4 (1880-1926)||(51702457-51702503)
chr4 (1899-1963)||(16467171-16467235)
chr4 (1890-1926)||(32626175-32626211)
chr4 (1899-1937)||(5975737-5975776)
chr4 (1899-1973)||(13372453-13372527)
chr4 (1899-1973)||(13382654-13382728)
chr4 (1904-1971)||(26335745-26335812)
chr4 (1904-1971)||(52437566-52437633)
chr4 (1880-1926)||(11020461-11020507)
chr4 (1913-1959)||(17181135-17181181)
chr4 (1880-1922)||(20503433-20503475)
chr4 (1880-1926)||(42434342-42434388)
chr4 (1899-1937)||(50677980-50678018)
chr4 (1867-1921)||(53773645-53773699)
chr4 (1904-1937)||(4712695-4712728)
chr4 (1867-1923)||(13388006-13388060)
[»] chr1 (62 HSPs)
chr1 (1881-1973)||(2752657-2752749)
chr1 (1867-1973)||(1469696-1469802)
chr1 (1899-1973)||(17168237-17168311)
chr1 (1867-1982)||(26284499-26284613)
chr1 (1867-1926)||(9005416-9005475)
chr1 (1899-1971)||(8549565-8549637)
chr1 (1905-1973)||(38509645-38509713)
chr1 (1899-1973)||(1627676-1627750)
chr1 (1899-1973)||(24992866-24992940)
chr1 (1867-1973)||(26842799-26842904)
chr1 (1899-1973)||(43939453-43939527)
chr1 (1899-1973)||(49660369-49660443)
chr1 (1899-1973)||(1838661-1838736)
chr1 (1867-1926)||(2964972-2965030)
chr1 (1875-1926)||(9679712-9679763)
chr1 (1880-1926)||(25825408-25825454)
chr1 (1880-1926)||(44720066-44720112)
chr1 (1881-1926)||(14463321-14463366)
chr1 (1920-1973)||(48875107-48875159)
chr1 (1865-1973)||(22675114-22675221)
chr1 (1878-1926)||(26213809-26213857)
chr1 (1879-1926)||(1627784-1627831)
chr1 (1867-1926)||(1838771-1838830)
chr1 (1899-1973)||(2964863-2964937)
chr1 (1908-1982)||(9005517-9005591)
chr1 (1899-1973)||(25825299-25825373)
chr1 (1899-1973)||(30414103-30414177)
chr1 (1899-1973)||(42470582-42470656)
chr1 (1880-1926)||(1406710-1406756)
chr1 (1901-1982)||(4105587-4105668)
chr1 (1899-1968)||(10769775-10769844)
chr1 (1880-1926)||(30414212-30414258)
chr1 (1881-1926)||(17168157-17168202)
chr1 (1881-1926)||(30819623-30819668)
chr1 (1881-1926)||(40460983-40461028)
chr1 (1899-1942)||(47921642-47921686)
chr1 (1904-1971)||(158541-158608)
chr1 (1904-1971)||(463439-463506)
chr1 (1899-1937)||(7336094-7336133)
chr1 (1904-1971)||(13157686-13157753)
chr1 (1867-1922)||(17453010-17453065)
chr1 (1879-1926)||(25671087-25671134)
chr1 (1904-1971)||(27787927-27787994)
chr1 (1904-1971)||(33675823-33675890)
chr1 (1903-1937)||(24770755-24770789)
chr1 (1899-1972)||(26897335-26897407)
chr1 (1905-1971)||(34515258-34515324)
chr1 (1913-1955)||(36630440-36630482)
chr1 (1880-1926)||(38509730-38509776)
chr1 (1903-1937)||(41146286-41146320)
chr1 (1880-1926)||(49659892-49659938)
chr1 (1903-1937)||(50559375-50559409)
chr1 (1881-1926)||(5226801-5226846)
chr1 (1904-1937)||(5491728-5491761)
chr1 (1880-1921)||(7336173-7336214)
chr1 (1904-1937)||(13264567-13264600)
chr1 (1904-1937)||(16005600-16005633)
chr1 (1904-1937)||(26843124-26843157)
chr1 (593-634)||(38230939-38230980)
chr1 (1904-1937)||(42199889-42199922)
chr1 (1904-1937)||(42208757-42208790)
chr1 (1881-1926)||(47921562-47921607)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1867-1973)||(8529-8634)
[»] chr6 (23 HSPs)
chr6 (1867-1973)||(19143617-19143721)
chr6 (1886-1971)||(22423901-22423986)
chr6 (1899-1973)||(12159449-12159523)
chr6 (1900-1973)||(15081203-15081276)
chr6 (1904-1971)||(29427237-29427304)
chr6 (1899-1973)||(6322571-6322645)
chr6 (1880-1973)||(28295551-28295647)
chr6 (1880-1973)||(28516426-28516522)
chr6 (1882-1926)||(17347156-17347200)
chr6 (1899-1973)||(10075074-10075148)
chr6 (1867-1926)||(12159558-12159623)
chr6 (1899-1973)||(14975407-14975480)
chr6 (1880-1926)||(18096331-18096377)
chr6 (1881-1926)||(10074994-10075039)
chr6 (1899-1971)||(17347049-17347121)
chr6 (1921-1973)||(18096429-18096480)
chr6 (1921-1973)||(18102549-18102600)
chr6 (1899-1969)||(9533450-9533519)
chr6 (1913-1943)||(9406756-9406786)
chr6 (1880-1926)||(9891373-9891419)
chr6 (1904-1937)||(14488331-14488364)
chr6 (1867-1924)||(30416495-30416552)
chr6 (1904-1937)||(33730554-33730587)
[»] scaffold0168 (2 HSPs)
scaffold0168 (1899-1970)||(35135-35206)
scaffold0168 (1880-1926)||(35054-35100)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1899-1973)||(94810-94884)
scaffold0002 (1881-1922)||(95051-95092)
scaffold0002 (1885-1926)||(478315-478356)
[»] scaffold0093 (2 HSPs)
scaffold0093 (1899-1973)||(9232-9306)
scaffold0093 (1883-1926)||(9155-9198)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1880-1926)||(392406-392452)
scaffold0001 (1900-1973)||(392488-392561)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1880-1971)||(74985-75076)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1899-1973)||(17867-17941)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1877-1926)||(49818-49867)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1882-1926)||(77027-77071)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1904-1971)||(9860-9927)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1867-1926)||(231239-231297)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1904-1937)||(6575-6608)


Alignment Details
Target: chr3 (Bit Score: 702; Significance: 0; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 702; E-Value: 0
Query Start/End: Original strand, 1401 - 2178
Target Start/End: Original strand, 46770016 - 46770793
Alignment:
Q  1401 tatgcctacgatcaataagaattgaatcaaaatatgacacatcatcttgaggattgtgaaaatcatccacctttcttcgctatccggctcaaaatcaata 1500  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46770016 tatgcctacaattaataagaattgaatcaaaatatgacacatcatcttgaggattgtgaaaatcatccacctttctttgctatccggctcaaaatcaata 46770115  T
Q  1501 tcacaactcttgctagccgataacaattagatttaaaggctctaaccattcaatttttgcaaaaacgaaacatcattgttcatctcgcagacatccccaa 1600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||     
T  46770116 tcacaactcttgctagccgataacaattagatttaaaggctctaaccattcaattttagcaaaaacgaaacatcattgttcatctcgcagacatcctcag 46770215  T
Q  1601 taccaacacaattatttcttatggaaaaagaggcatcaacgttgcattttagccgcaaccataggattagtccatttatcactaggagtagccacagcac 1700  Q
    |||||||||||||||| ||   | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  46770216 taccaacacaattattcctcgggaagaaagaggcatcaacgttgcattttagccgcaaccataggattagtccacttatcactaggagtagccacaacac 46770315  T
Q  1701 gcggcttcaatatgactagctaaatgtcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaa 1800  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770316 gtagcttcaatatgactagctaaatgtcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaa 46770415  T
Q  1801 attagtaatttgttttcaatatcaacaatgtaccataaaattagtaatttgttttcatatttattttatatatatgtgagttttgctagaagacaccctt 1900  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770416 attagtaatttgttttcaatatcaacaatgtaccataaaattagtaatttgttttcatatttattttatatatatgtgagttttgctagaagacaccctt 46770515  T
Q  1901 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattgatattaattgcaggac 2000  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  46770516 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagactttcattggtattaattgcaggac 46770615  T
Q  2001 ggaaaagttttacaagagggtcctgtttcccctctttataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttct 2100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770616 ggaaaagttttacaagagggtcctgtttcccctctctataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttct 46770715  T
Q  2101 tctatcttgagatgctttcttataggattcattggccgtttaattgatgtatcagtgaggtttgatactctaaggatt 2178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770716 tctatcttgagatgctttcttataggattcattggccgtttaattgatgtatcagtgaggtttgatactctaaggatt 46770793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 575 - 1368
Target Start/End: Original strand, 46769179 - 46769982
Alignment:
Q  575 attgacccgtaacaccacaattgatgacaaaattcttcctcaagagatctaacattgttacatgcctaggttagatgcgaacttgaatcctccggttaat 674  Q
    |||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46769179 attgaccgataacaccacaattgataacaaagttcttcctcaagagatctaacattgttacatgcctaggttagatgcgaacttgaatcctccggttaat 46769278  T
Q  675 ctcaaagagatctttaccaaatgttttgggtttacaaaagagatcccttactaaatgttacactagtggaagaannnnnnnncttaaaaaacaaatgaat 774  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  46769279 ctgaaagagatctttaccaaatgttttgggtttacaaaagagatcccttactaaatgttacactagtggaagaattttttt-cttaaaaaacaaatgaat 46769377  T
Q  775 aaatagattaaaccacatgcgcgctgttgtgcgttgagtcnnnnnnnagttcaatcttgttgtgcgttgagtattttatttttgtatattagtagcatgt 874  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46769378 aaatagattaaaccacatgcgcgctgttgtgcgttgagtctttttttagttcaatcttgttgtgcgttgagtattttatttttgtatattagtagtatgt 46769477  T
Q  875 tgtttaagcataaacgatgctgtctttatttattctctttgcaagttggacatgcataacacctatagcaactaattatnnnnnnn--------tatacg 966  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||    
T  46769478 tgtttaagcataaacgatgctgtctttatttattctctttgcaagttggacatgcataacacctatagcaactaattaattataaaaaaaaaaatatacg 46769577  T
Q  967 tgcttatctttcatctactttaggatcaagaattaatctgaaatttatcaacaa---taatcaagaatctggactataagctatatgatcgatctatctc 1063  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  46769578 tgcttatctttcatctactttaggatcaagaattaatctgaaatttatcaacaacaataatcaagaatctggactataagctatatgatcgatctatctc 46769677  T
Q  1064 caatcggcaggtgttggaaaaagatgagaagtgttgttcaatttaaaggcgtgttgttaaattacttaataagtatgat----tgtaatatcctctnnnn 1159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||        
T  46769678 caatcggcaggtgttggaaaaagatgagaagtgttgttcaatttaaaggcgtgttgttaaattacttaataagtatgatatattataatatcctctaaaa 46769777  T
Q  1160 nnnngactaattaaaatatataaaagcatggcctaagtacaactaaatcattccatcagtaataaacgatttaataaagaatcaacattaattaataagc 1259  Q
        ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46769778 aaaagactaa----aatatataaaagcatggcctaagtacaactaaatcattccatcagtaataaacgatttaataaagaatcaacattaattaataagc 46769873  T
Q  1260 agaatgaatctagttggagatgtaggtgtcacttaagctaaggcatgaacaacttaaaactctattagtttgtcttctaataaactcaatcttagagctt 1359  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  46769874 agaatgaatctagttggagatgtagtagtcacttaagctaaggcatgaacaacttaaaactctattaatttgtcttctaataaactcaatcttggagctt 46769973  T
Q  1360 ttgaagaag 1368  Q
    |||||||||    
T  46769974 ttgaagaag 46769982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 22 - 509
Target Start/End: Original strand, 46768615 - 46769113
Alignment:
Q  22 ggattgtacacatctcataaaattatggaaaatgatattgatatgatctgatatgaagagatatagattgatagacaccaaaagcccatctcttgagaga 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46768615 ggattgtacacatttcataaaattatggaaaatgatattgatatgatctgatatgaagagatatagattgatagacaccaaaagcccatctcttgagaga 46768714  T
Q  122 gagatagagtgagtgatctaaaagatgtgatatgttgttggtgtaataggaaaatatatagaga----------aaataaggtgttaaataaatgtagga 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |          ||||||||||||||||||||||||||    
T  46768715 gagatagagtgagtgatctaaaagatgtgatatgttgttggtgtaataggaagatatatatatatatatatataaaataaggtgttaaataaatgtagga 46768814  T
Q  212 aatttaagagtgtttaaatataaaagttgtaaaattacct-ccnnnnnnnggaaatgactcagtttactgaagtcaaataatttactaccatgtgcgggt 310  Q
    |||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  46768815 aatttaagagtgtttaaatataaaagttgtaaaattaccttcccttttttggaaatgactcagtttactgaagccaaataatttactaccatgtgcgagt 46768914  T
Q  311 cacagttccacgacttcactcacccaaccatattatgtccgtttgattggccatctaaaactcaaactagattttaatttctttttaaatttaaaatacg 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  46768915 cacagttccacgacttcactcacccaaccatattatgtccgtttgattggccatctgaaactcaatctagattttaatttctttttaaatttaaaatacg 46769014  T
Q  411 atttaaaatttgggtcgtgtttggtcttgattgagcaaccaatataatcttatcgtgttcggtaattgaaccctaatccaaaatttacaccctcaaata 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  46769015 atttaaaatttgggtcgtgtttggtcttgattgagcaaccaatataatcttatcgtgttcaataattgaaccttaatccaaaatttacaccctcaaata 46769113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1727 - 1831
Target Start/End: Original strand, 46762478 - 46762582
Alignment:
Q  1727 tcagtgctcgttcaatttcttaggcttatcttacacgacgattcctacttaatcttaaaaaggtgatctataaaattagtaatttgttttcaatatcaac 1826  Q
    |||||||||||||||||||| | || ||| ||||||||| ||||||||| ||||||||| |||||||  |||||||  | ||| ||||||||||||||||    
T  46762478 tcagtgctcgttcaatttctcaagcctatattacacgacaattcctactgaatcttaaacaggtgatgcataaaatgcgcaatctgttttcaatatcaac 46762577  T
Q  1827 aatgt 1831  Q
    |||||    
T  46762578 aatgt 46762582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 27418840 - 27418768
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||  |||||||||||    
T  27418840 tttatgaaggtgtcttttagcaagttataactaaaaagtagataattac--cttgaggtgtgagttgctaaaaga 27418768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 34673422 - 34673348
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  34673422 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 34673348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1946
Target Start/End: Original strand, 36227873 - 36227920
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1946  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36227873 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 36227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 46970008 - 46969902
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| |  |||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| || ||||| | ||||| |||||| |||    
T  46970008 tatatatatatatgttttgctagaagacacattttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcataccttgatgtgtgggttg 46969910  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  46969909 ctaaaaga 46969902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1899 - 1959
Target Start/End: Original strand, 6125852 - 6125913
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataact-aaaaagttgataatcacaacttgaggtgt 1959  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  6125852 tttatgaaggtgtcttttagcaagttataactaaaaaagtggataatcacaccttgaggtgt 6125913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 27027381 - 27027333
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27027381 gagttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 27027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 1899 - 1986
Target Start/End: Original strand, 39328494 - 39328581
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattgat 1986  Q
    |||||||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||| ||||||| |  |||||||||    
T  39328494 tttatgaaagtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgttaaaagacaccttcattgat 39328581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 3283444 - 3283385
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||    
T  3283444 tatatatatatgggttttgctagaagacacattttatgaaggtgtcttttagcaagttat 3283385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 8674618 - 8674692
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||| || ||||||||||||    
T  8674618 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtatgaattgctaaaaga 8674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 52089124 - 52089199
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||  || |||||| ||||| |||||||||||    
T  52089124 tttatgaaggtgtcttttagcaagtttataactaaaaagtggataatatcaccttgagatgtgggttgctaaaaga 52089199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 54253873 - 54253799
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  54253873 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 54253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 42092808 - 42092854
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  42092808 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 42092854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 50090989 - 50090943
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  50090989 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 50090943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 54160389 - 54160435
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  54160389 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 54160435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1877 - 1926
Target Start/End: Original strand, 8674534 - 8674583
Alignment:
Q  1877 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8674534 tgagttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 8674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1869 - 1926
Target Start/End: Original strand, 39328402 - 39328459
Alignment:
Q  1869 tatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||    
T  39328402 tatatatatggggtttgctagaagacaccttttatgaaggtgtcttttagcaagttat 39328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1882 - 1926
Target Start/End: Complemental strand, 34673625 - 34673581
Alignment:
Q  1882 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  34673625 tttgctagaagacaccttttatgaaggtgtcttttagcaagttat 34673581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 3283350 - 3283276
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| | ||||||||||||||  | ||||||| |||||||||||| |||||||||||    
T  3283350 tttatgaaggtgtcttttagcaaagctataactaaaaagtaaa-aatcacaccttgaggtgtgggttgctaaaaga 3283276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 41355495 - 41355569
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||| |||||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  41355495 tttatgaaggtgtcttatagcaaagttataactaaaaagtgga-aatcacaccttgagttgtgggttgctaaaaga 41355569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 52945651 - 52945725
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||  |||||||||||    
T  52945651 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacactttgaggtgtgagttgctaaaaga 52945725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 6125771 - 6125817
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  6125771 gttttgctagaagacacattttatgaaggtgtcttttagcaagttat 6125817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 21396020 - 21395974
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21396020 gttttgctagaagacaccttttatgaaggtgttttttagcaagttat 21395974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 36418714 - 36418760
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  36418714 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 36418760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 35280490 - 35280562
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||    
T  35280490 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgagttgtgggttgctaaaa 35280562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 38101267 - 38101195
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||| | |||||||||    
T  38101267 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtaggttgctaaaa 38101195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1054 - 1122
Target Start/End: Original strand, 46774086 - 46774154
Alignment:
Q  1054 gatctatctccaatcggcaggtgttggaaaaagatgagaagtgttgttcaatttaaaggcgtgttgtta 1122  Q
    ||||||| |||||| | || ||||||||||||||||||||||||| || |||||||||| | |||||||    
T  46774086 gatctatttccaatagacatgtgttggaaaaagatgagaagtgttattaaatttaaaggtgggttgtta 46774154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1866 - 1926
Target Start/End: Complemental strand, 54253968 - 54253908
Alignment:
Q  1866 ttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||| || ||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  54253968 ttatatatatatgggttttgctagaagacgcattttatgaaggtgtattttagcaagttat 54253908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 54411870 - 54411787
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||| ||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||| | ||||||||||| | ||||||    
T  54411870 tttataaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtaggttgctaaaagacactttcat 54411787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 4126055 - 4126129
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| || ||||||||||| ||||||| |||||||| || ||||||| ||||||||||||||| ||||||||    
T  4126055 tttatgaatgtatcttttagcaaagttataattaaaaagtgga-aatcacaccttgaggtgtggattactaaaaga 4126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 5232789 - 5232730
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || ||||||||| |||||||  |||||||||||||| |||||||||||||    
T  5232789 tatatatatatgggttttgctacaagacacattttatgaaggtgtcatttagcaagttat 5232730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 11238748 - 11238822
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||| ||| ||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  11238748 tttatgaagatgtattttaacaaagttataactaaaaagtaga-aatcacaccttgaggtgtgggttgctaaaaga 11238822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 13700328 - 13700254
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||| ||||||| ||| |||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  13700328 tttatgaaggtatcttttaacaaagttataactaaaaagtgga-aatcacacattgaggtgtgggttgctaaaaga 13700254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 45408234 - 45408293
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  45408234 tatatatatatatgttttgctagaaaacaccttttatgaaagtgtcttttagcaagttat 45408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 45408328 - 45408402
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| |||  ||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  45408328 tttatgaaggtgtcttttaccaaaattataactaaaaagtgga-aatcacaccttgaggtgtgcgttgctaaaaga 45408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 50090908 - 50090834
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||| |||||||||  ||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  50090908 tttatgaaagtgttttttagcaaaattataactaaaaagtgga-aatcacaccttaaggtgtggattgctaaaaga 50090834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1984
Target Start/End: Original strand, 54160470 - 54160553
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcattg 1984  Q
    ||||||||||||||||||| ||| |||||||| ||||||| || ||||||  ||||||||||||||| |||||||| || |||||||    
T  54160470 tttatgaaggtgtcttttaacaaagttataacaaaaaagt-gaaaatcac--cttgaggtgtggattactaaaagacatcttcattg 54160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1922
Target Start/End: Complemental strand, 54411963 - 54411909
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||    
T  54411963 tatatatatatg-gttttgctagaagacaccttttatgaaggtgttttttagcaag 54411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 37702729 - 37702683
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||    
T  37702729 gttttgctagaagacaccttttttgaaagtgtcttttagcaagttat 37702683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 2116 - 2158
Target Start/End: Original strand, 46762865 - 46762907
Alignment:
Q  2116 tttcttataggattcattggccgtttaattgatgtatcagtga 2158  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  46762865 tttcttatatgattcattggccatttaattgatgtatcagtga 46762907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 19855546 - 19855617
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| || ||||||||||||||| || |||||||    |||||||||||||||||||||    
T  19855546 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcaca---cgaggtgtggattgctaaaaga 19855617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1899 - 1970
Target Start/End: Complemental strand, 37702648 - 37702577
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1970  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||| |||||| |||||  ||||| ||||||||    
T  37702648 tttatgaaggtgttttttagcaaagttataactaaaaagtggat-atcacaccttgatttgtggcttgctaaa 37702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1887 - 1926
Target Start/End: Original strand, 8351060 - 8351099
Alignment:
Q  1887 tagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  8351060 tagaagacactttttatgaaggtgtcttttagcaagttat 8351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 20513109 - 20513035
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||| ||| |||||||||||||||| || ||||||| ||||  |||||| |||||||||||    
T  20513109 tttatgaaggtgttttttaacaaagttataactaaaaagtgga-aatcacaccttggagtgtgggttgctaaaaga 20513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1935
Target Start/End: Original strand, 26103748 - 26103779
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaa 1935  Q
    ||||||||||||||||||||||||||||||||    
T  26103748 gaaggtgtcttttagcaagttataactaaaaa 26103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 27038061 - 27037987
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||||||  ||||||||| || || ||||||||    
T  27038061 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacgccttgaggtgggggtttctaaaaga 27037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 2030 - 2105
Target Start/End: Original strand, 46762702 - 46762777
Alignment:
Q  2030 ccctctttataccgcgaaggtaataagtctgcttacctttgttttctgtttctttttactgttccctttcttctat 2105  Q
    |||||| ||||||| ||||| ||||| |||  ||| ||| |||||||| |||| |||||||||| |||||||||||    
T  46762702 ccctctctataccgtgaaggcaataaatcttattatcttcgttttctgcttctatttactgttctctttcttctat 46762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 51614687 - 51614613
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| |||||||||||||| ||  |||||||||||||||  | |||||||  |||||||||||||||||||||||    
T  51614687 tttataaaggtgtcttttagtaaaattataactaaaaagtcca-aatcacacattgaggtgtggattgctaaaaga 51614613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Complemental strand, 53581618 - 53581551
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  53581618 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 53581551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 19855465 - 19855511
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||| |||||| ||| ||||||||||||||| ||||||||||||    
T  19855465 gttttgcgagaagaaaccttttatgaaggtgtctattagcaagttat 19855511  T

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Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 35711987 - 35711941
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  |||| || ||||||||||||||||||||    
T  35711987 gttttgctagaagacacattttacgagggtgtcttttagcaagttat 35711941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 36418795 - 36418867
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||| ||||||||||||||| ||||||||| |||||||| ||| |||||| ||| |||||||  |||||||||    
T  36418795 tttatcaaggtgtcttttagcaaagttataattaaaaagtggat-atcacaccttaaggtgtgacttgctaaaa 36418867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 50801633 - 50801600
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  50801633 gaaggtgtgttttagcaagttataactaaaaagt 50801600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 50874247 - 50874280
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  50874247 gaaggtgtgttttagcaagttataactaaaaagt 50874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 53467484 - 53467517
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  53467484 gaaggtgtgttttagcaagttataactaaaaagt 53467517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-31; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-31
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 27131078 - 27131152
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27131078 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 27131152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-29
Query Start/End: Original strand, 1880 - 1973
Target Start/End: Complemental strand, 32392331 - 32392237
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||| |||||||||||    
T  32392331 gttttgctagaagacaccttttatgaaggtgtcttttagcaagtttataactaaaaagtggataatctcaccttgaggtgtgggttgctaaaaga 32392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 7596984 - 7596879
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1966  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||  |||||||||| ||||     
T  7596984 tatatatatatga-ttttgctaaaagacactctttatgaaggtgtcttttaacaaattataactaaaaagtggataatcacacattgaggtgtgaattgt 7596886  T
Q  1967 taaaaga 1973  Q
    |||||||    
T  7596885 taaaaga 7596879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 48709109 - 48709035
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||| |||||    
T  48709109 tttatgaaggtgtcttttagcaagttattactaaaaagtggatagtcacaccttgaggtgtggattgctgaaaga 48709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1899 - 1970
Target Start/End: Original strand, 20568340 - 20568411
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1970  Q
    ||||| |||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20568340 tttatcaaggtgtcttgtagcaaattataactaaaaagtggataatcacaccttgaggtgtggattgctaaa 20568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 1881 - 1973
Target Start/End: Complemental strand, 28333855 - 28333763
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||| |||| | |||||||||||    
T  28333855 ttttgctagaagacaccttgtatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttgacgtgttggttgctaaaaga 28333763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 3875220 - 3875302
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| | ||||||    
T  3875220 tttatgaaggtttcttttaacaagttataa-taaaaagttgataatcacaccttgaggtatggattgttaaaagacactttcat 3875302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 21993551 - 21993625
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  21993551 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 21993625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 27130984 - 27131043
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  27130984 tatatatatatgggttttgctagaagacaccctttatgaaggtgttttttagcaagttat 27131043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 41378445 - 41378371
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  41378445 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 41378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1901 - 1971
Target Start/End: Complemental strand, 8953360 - 8953290
Alignment:
Q  1901 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  8953360 tatgaagatgtcttttaataagttataactaaaaagttgataatcacaccttgatgtgtgaattgctaaaa 8953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 5995221 - 5995162
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||    
T  5995221 tatatatatatgggttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 5995162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 26928039 - 26927965
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  26928039 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgagttgctaaaaga 26927965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 41585953 - 41585879
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  41585953 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 41585879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1899 - 1957
Target Start/End: Original strand, 24251910 - 24251968
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggt 1957  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||    
T  24251910 tttatgaaggtgtcttttaacaagttataactaaaaagttgattatcacatcttaaggt 24251968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 27946897 - 27946823
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||| | ||| || |||| ||||||||||||    
T  27946897 tttatgaaggtgtcttttaacaaattataactaaaaaattgataatcatatcttaagatgtgaattgctaaaaga 27946823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 38368241 - 38368315
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||| || | |||||||||||  |||||||||||    
T  38368241 tttatgaaggtgtattttagcaagttataactaaaaattggataaacataccttgaggtgtgacttgctaaaaga 38368315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1899 - 1960
Target Start/End: Complemental strand, 42373532 - 42373471
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtg 1960  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||  ||||||||||    
T  42373532 tttatgaagatgtcttttagcaagttctaactaaaaagtggataatcacatattgaggtgtg 42373471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 27946980 - 27946932
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27946980 gagttttgctagaagacactctttatggaggtgtcttttagcaagttat 27946932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1880 - 1935
Target Start/End: Complemental strand, 48625039 - 48624983
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaa 1935  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  48625039 gttttgctataagacaccttttatgaaggtgtcttttagcaaagttataactaaaaa 48624983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 5995127 - 5995052
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||  |||||||||||||  ||  ||||||| |||||||||| |||||||||||||    
T  5995127 tttatgaaggtgtcttttagcaaaattataactaaaaaagtgtaaatcacaccttgaggtgtagattgctaaaaga 5995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 35221739 - 35221665
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||  || |||||||||||| |||||||||||    
T  35221739 tttatgaaggtgtcttttagctaagttataactaaaaagtaga-aatttcaccttgaggtgtgggttgctaaaaga 35221665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 35983188 - 35983262
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||| ||||||||||| |||||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  35983188 tttatgaaggtatcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtgggttgctaaaaga 35983262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 36004600 - 36004674
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||| ||||||||||| |||||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  36004600 tttatgaaggtatcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtgggttgctaaaaga 36004674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 41037206 - 41037280
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| ||| |||||||    
T  41037206 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgttaaaaga 41037280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 48227305 - 48227231
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| ||||||||||||||||| |||||||||||||||| || ||||||| ||||| |||||| |||||||||||    
T  48227305 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaagtgtgggttgctaaaaga 48227231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 3203446 - 3203400
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  3203446 gttttgctagaagataccttttatgaaggtgtcttttagcaagttat 3203400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1881 - 1931
Target Start/End: Complemental strand, 20418026 - 20417976
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1931  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  20418026 ttttgctagaagacaccttttatgaatgtgtcttttagcaaattataacta 20417976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1905 - 1969
Target Start/End: Complemental strand, 9522534 - 9522470
Alignment:
Q  1905 aaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1969  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||| ||||||||||||||||||||    
T  9522534 aaggtgtcttttatcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaa 9522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1881 - 1973
Target Start/End: Complemental strand, 20009273 - 20009181
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||||||  ||||||||||||||||||| | ||||||||||||||||| | | ||||||| |||||||| ||  |||||||||||    
T  20009273 ttttgctataagacacattttatgaaggtgtcttttaacaaagttataactaaaaag-taaaaatcacatcttgaggtatgagttgctaaaaga 20009181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 21993471 - 21993516
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  21993471 ttttgctagaagacacattttatgaaggtgtcttttagcaagttat 21993516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1880 - 1925
Target Start/End: Original strand, 31953159 - 31953204
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1925  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  31953159 gttttgctagaacacaccttttatgaaggtgtcttttagcaagtta 31953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 3407220 - 3407148
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||  |||||||||    
T  3407220 tttatgaagctgtcttttagcaagttataactaaaaagtgaataaatacaccttgaagtgtgtgttgctaaaa 3407148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 35221827 - 35221779
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  35221827 gagttttgctagaagatactttttatgaaggtgtcttttagcaagttat 35221779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1880 - 1924
Target Start/End: Complemental strand, 43077648 - 43077604
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1924  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  43077648 gttttgctagaagacaccttttatgaaggtgttttttagcaagtt 43077604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 3203365 - 3203287
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-----ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| ||     ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  3203365 tttatgaaggtgtcttttagctagcaaatttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 3203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1865 - 1926
Target Start/End: Original strand, 3961165 - 3961223
Alignment:
Q  1865 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||   ||||||||||||||||  |||||||| |||||||||||||||||||    
T  3961165 tttatatatatgt---ttttgctagaagacacattttatgaaagtgtcttttagcaagttat 3961223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 12362906 - 12362823
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||| ||||||||| ||| |||||| |||||||||||||| || | ||| ||||||| |||||||| ||| || |||||    
T  12362906 tttatgaagatgtcttttaacaaattataattaaaaagttgataaacataccttaaggtgtgaattgctaacagacatattcat 12362823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 14313939 - 14313998
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  14313939 tatatatatatatgttttgttagaagataccttttatgaaggtgtcttttagcaagttat 14313998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 20568246 - 20568304
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||| |||| |||||| |||||||||||||| |||||||||||||||||||    
T  20568246 tatatatatatgattttt-ctagaaaacaccctttatgaatgtgtcttttagcaagttat 20568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 24611497 - 24611571
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||||||||| ||| |||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  24611497 tttatgaaagtgtcttttaacaaagttataactaaaaagt-gaaaatcacacattgaggtgtgggttgctaaaaga 24611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1921
Target Start/End: Complemental strand, 31853857 - 31853805
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaa 1921  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||||||||||||    
T  31853857 tatatatatatgagttttgctagaagaca--ctttttgaaggtgtcttttagcaa 31853805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 31953240 - 31953314
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||| ||| |||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  31953240 tttatgaaggtgttttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgtgttgctaaaaga 31953314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 35983094 - 35983153
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  35983094 tatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttat 35983153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 36004506 - 36004565
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  36004506 tatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttat 36004565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 45099958 - 45100017
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  45099958 tatatatatatgggttttgctagaagacacattttatgaaggtgttttttaacaagttat 45100017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 45100052 - 45100126
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||| |||||||||| ||  ||||||| ||||||| |||| |||||||||||    
T  45100052 tttatgaaggtgtcttttagcaaagttacaactaaaaag-tgtaaatcacatcttgaggcgtgggttgctaaaaga 45100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1902 - 1971
Target Start/End: Complemental strand, 3350085 - 3350016
Alignment:
Q  1902 atgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||||||||||||| || ||||||||||||||| || ||||||| |||||| ||||| |||||||||    
T  3350085 atgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaa 3350016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1867 - 1925
Target Start/End: Complemental strand, 9522630 - 9522573
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1925  Q
    ||||||||| || |||||||||||||||||  ||||||||| |||||||||||||||||    
T  9522630 tatatatatatg-gttttgctagaagacacattttatgaagatgtcttttagcaagtta 9522573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1927 - 1973
Target Start/End: Original strand, 31853769 - 31853815
Alignment:
Q  1927 aactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  31853769 aactaaaaagtggataatcacaccttgaagtgtggattgctaaaaga 31853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 42373613 - 42373567
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||    
T  42373613 gttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 42373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1880 - 1925
Target Start/End: Complemental strand, 46003888 - 46003843
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1925  Q
    |||||||||||||||||  || ||||||||||||||||||||||||    
T  46003888 gttttgctagaagacacatttcatgaaggtgtcttttagcaagtta 46003843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 12362989 - 12362941
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||| || |||||||||||||||||||| |||||||||| ||||||||    
T  12362989 gagttctgttagaagacaccctttatgaatgtgtcttttaacaagttat 12362941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 3961258 - 3961332
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| ||||||| |||||||||  ||||||||||||| |||| ||| ||| |||||||||||| |||||||||||    
T  3961258 tttattaaggtgttttttagcaaaattataactaaaaa-ttgaaaatgacatcttgaggtgtgggttgctaaaaga 3961332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 14656535 - 14656609
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||| |||||||  ||||||||||| || ||||||||    
T  14656535 tttatgaaggtgtcttttaacaaagttataact-aaaaggtgaaaatcacacattgaggtgtgggtttctaaaaga 14656609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 15957340 - 15957407
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  15957340 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 15957407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 27168379 - 27168446
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  27168379 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 27168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1905 - 1971
Target Start/End: Complemental strand, 938964 - 938898
Alignment:
Q  1905 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  938964 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 938898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 3875109 - 3875155
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  |||||||| |||| ||||||||||||||    
T  3875109 gttttgctagaagacacattttatgaaagtgtattttagcaagttat 3875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1884 - 1922
Target Start/End: Original strand, 38368164 - 38368202
Alignment:
Q  1884 tgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  38368164 tgctagaagacaccttttatgaatgtgtcttttagcaag 38368202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 41378526 - 41378480
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  41378526 gttttgctagaagacactttttattaaggtgttttttagcaagttat 41378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1922
Target Start/End: Complemental strand, 48227386 - 48227344
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||    
T  48227386 gttttgctggaagacaccttttatgaaggtgtattttagcaag 48227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 2509446 - 2509479
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  2509446 gaaggtgtgttttagcaagttataactaaaaagt 2509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 2936710 - 2936677
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  2936710 gaaggtgtgttttagcaagttataactaaaaagt 2936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 11766191 - 11766158
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  11766191 gaaggtgtgttttagcaagttataactaaaaagt 11766158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1877 - 1926
Target Start/End: Complemental strand, 28059382 - 28059334
Alignment:
Q  1877 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  28059382 tgagttttgctagaagacaccttttatgaagg-atcttttaggaagttat 28059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 28912152 - 28912119
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  28912152 gaaggtgtgttttagcaagttataactaaaaagt 28912119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 69; Significance: 4e-30; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 69; E-Value: 4e-30
Query Start/End: Original strand, 1867 - 1975
Target Start/End: Complemental strand, 24690 - 24582
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1966  Q
    ||||||||| |||||||||||||||||||   |||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||  ||||    
T  24690 tatatatatatgagttttgctagaagacattttttatgaaggtgtcttgtagcaagttataaataaaaagttgataatcaaatcttgaggtgtgacttgc 24591  T
Q  1967 taaaagaga 1975  Q
    |||||||||    
T  24590 taaaagaga 24582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1879 - 1971
Target Start/End: Complemental strand, 35994 - 35902
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||| || || |||| || |||||||  ||||||||||    
T  35994 agttttgctagaagacaacttttatgaaggtgtcttttagcaaaattataactaaaaagtaga-aaacacacctggaggtgttaattgctaaaa 35902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 2e-29; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 2e-29
Query Start/End: Original strand, 1880 - 1959
Target Start/End: Complemental strand, 88264 - 88185
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1959  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  88264 gttttgctagaagataccctttatgaaggtgtcttttaggaagttataactaaaaagttgataatcacaccttgaggtgt 88185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 103321 - 103249
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  103321 tttatgaaggtgttttttaggaagttataactaaaaagttgataatcacaacttgaggtgtggtttactaaaa 103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1883 - 1926
Target Start/End: Complemental strand, 103399 - 103356
Alignment:
Q  1883 ttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  103399 ttgctagaagacaccctttatgaaggtgttttttagtaagttat 103356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-29; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-29
Query Start/End: Original strand, 1883 - 1973
Target Start/End: Complemental strand, 27175560 - 27175470
Alignment:
Q  1883 ttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||||||||    
T  27175560 ttgctagaagacacattttatgaaggtgtcttttagcaagttataactaaaaagtggataatcacaccttgaggtgttgcttgctaaaaga 27175470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 1880 - 1973
Target Start/End: Original strand, 10862577 - 10862670
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  10862577 gttttgctagaagacaccttttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 10862670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 34125620 - 34125546
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34125620 tttatgaatgtgtcttttagcaacctataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 34125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 5601711 - 5601783
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  5601711 tttatgaaggtgtcttttagcaaattataactaaaaagttgataatcacaccttgagccgtggattgctaaaa 5601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1867 - 1937
Target Start/End: Original strand, 6231208 - 6231279
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagt 1937  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  6231208 tatatatatatgagttttgctagaagacaccatttatgaaggtgtcttttagcaaagttataactaaaaagt 6231279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 29511942 - 29511835
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||||||| ||||  ||||||||||||||||||||| || ||||||||||||||| ||||| |||| |||||||||||  |||    
T  29511942 tatatatatatgggttttgctagaaaacacattttatgaaggtgtcttttagcaaaattataactaaaaagtggataagcacaccttgaggtgtgacttg 29511843  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  29511842 ctaaaaga 29511835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Original strand, 34450304 - 34450409
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| ||| ||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||| || ||||||| |||||||||||| |||    
T  34450304 tatatatatatga-ttttgctagaagacacattttatgaaggtgtcttttagcaaagttataaataaaaagtgga-aatcacaccttgaggtgtgggttg 34450401  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  34450402 ctaaaaga 34450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 4206514 - 4206588
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||||    
T  4206514 tttatgaatgtgtcttttagcaagttataactaaaaagtggataatcacaccttaaggtgtggcttgctaaaaga 4206588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 25880661 - 25880735
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  25880661 tttatgaaggtgttttttaacaagttataactaaaaagttgataatcacactttgaggtgtggattgctgaaaga 25880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1863 - 1926
Target Start/End: Original strand, 4206413 - 4206476
Alignment:
Q  1863 attttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4206413 attttatatatatatgagttttgctagaagacacattttatgaaggtgtcttttagcaagttat 4206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 18924705 - 18924646
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18924705 tatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 18924646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Original strand, 27097021 - 27097127
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtctttta-gcaagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||||||||||||| |||||||||||||  |||| | |||||||||||||||||| || ||||||| |||||||||||| |||    
T  27097021 tatatatatatgggttttgctagaagacaccttttatgaaggtgttatttaggaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttg 27097119  T
Q  1966 ctaaaaga 1973  Q
    | ||||||    
T  27097120 ccaaaaga 27097127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 36779910 - 36779802
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataact--aaaaagttgataatcacaacttgaggtgtggat 1963  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||| || |||||||  ||||||||| |||    
T  36779910 tatatatatatgagttttcctagaagacaccttttatgaaggtgtcttttagcaaagttttaactaaaaaaagtgga-aatcacacattgaggtgtagat 36779812  T
Q  1964 tgctaaaaga 1973  Q
    ||||||||||    
T  36779811 tgctaaaaga 36779802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 1904 - 1973
Target Start/End: Complemental strand, 39961605 - 39961536
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  39961605 gaaggtgtcttttatcaaattataactaaaaagttgataatcatactttgaggtgtggattgctaaaaga 39961536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 9548282 - 9548208
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  9548282 tttatgaaggtgtcttttagcgaagttataactaaaaagtgga-aatcacatcttgaggtgtgggttgctaaaaga 9548208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 29471706 - 29471632
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||  ||||||||||||||||||||||||    
T  29471706 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcactccttgaggtgtggattgctaaaaga 29471632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 12895410 - 12895484
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| | |||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  12895410 tttatgaaggtgtcttttaacaatgctataactaaaaagt-gaaaatcacatcttgaggtgtggattgctaaaaga 12895484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 14747462 - 14747356
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||||||||||| | |||||||||||||||||| || || |||||| ||||||  ||| ||||||| ||| |||||||| |||    
T  14747462 tatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttggcaaaattataattaaaaa-atgaaaatcacaccttaaggtgtgggttg 14747364  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  14747363 ctaaaaga 14747356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 24314296 - 24314370
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| ||||||||||||| || || ||||||| ||||||||||| ||||||||||||    
T  24314296 tttatgaaggtgtcttttagcaaagttataactaaaatgtgga-aatcacaccttgaggtgtgaattgctaaaaga 24314370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 29471800 - 29471741
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29471800 tatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 29471741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 33740222 - 33740281
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  33740222 tatatatatatgggttttactagaagacaccttttatgaaggtgtcttttagcaagttat 33740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 21950721 - 21950804
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    |||||||| |||||||||||||| |||||||||||||||| || ||||| | |||||||||||| ||||||||||| | ||||||    
T  21950721 tttatgaatgtgtcttttagcaaagttataactaaaaagt-gaaaatcataccttgaggtgtgggttgctaaaagacactttcat 21950804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 9548376 - 9548317
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  9548376 tatatatatatgggttttgctataagacatcttttatgaaggtgtcttttagcaagttat 9548317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 10664763 - 10664689
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||| |||||||||||| |||||||||||||||| || ||||||| |||||||||||| || ||||||||    
T  10664763 tttatgaaggcgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttactaaaaga 10664689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 10664857 - 10664798
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  10664857 tatatatatatgaattttgctataagacacattttatgaaggtgtcttttagcaagttat 10664798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 12725789 - 12725715
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  |||||||||||  ||||||||||    
T  12725789 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacactttgaggtgtggcctgctaaaaga 12725715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 18924611 - 18924537
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||| |||||||| |||||||||||||||| || ||||||| |||||||| ||| |||||||||||    
T  18924611 tttatgaaggtgtcctttagcaaagttataactaaaaagtgga-aatcacaccttgaggtatgggttgctaaaaga 18924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 25810570 - 25810512
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  25810570 tatatatatgtg-gttttgctagaagataccttttatgaaggtgttttttagcaagttat 25810512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 16719880 - 16719834
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  16719880 gttttgctagaagacaccttttatgaaggtgtcttttagctagttat 16719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1867 - 1929
Target Start/End: Original strand, 33471418 - 33471480
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataac 1929  Q
    ||||||||| | ||||||||||||||||  | |||||||| ||||||||||||||||||||||    
T  33471418 tatatatatataagttttgctagaagacgtcttttatgaatgtgtcttttagcaagttataac 33471480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 5534361 - 5534289
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||| | ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||    
T  5534361 tttatgaaggtattttttagcaaagttataattaaaaagttga-aatcacatcttgaggtgtggattactaaaa 5534289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 39089175 - 39089103
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||| ||||||||||||| |||||||||||||| | || ||||| | ||||||||||||||||||||||    
T  39089175 tttatgaagatgtcttttagcaaagttataactaaaaaatgga-aatcataccttgaggtgtggattgctaaaa 39089103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 42090496 - 42090579
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||||| ||||||||||||||||  ||| ||||||| ||| ||||||||||||  |||||| | ||||||    
T  42090496 tttatgaaggtgtcttttagcaaagttataactaaaaa-atgaaaatcacatcttaaggtgtggattgtgaaaagacactttcat 42090579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Complemental strand, 12725871 - 12725824
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  12725871 agttttgctagaagacaccttttataaagatgtcttttagcaagttat 12725824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1877 - 1924
Target Start/End: Complemental strand, 39435087 - 39435040
Alignment:
Q  1877 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1924  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  39435087 tgagttttgctagaagacaccttttatgaaagtgtcttttaacaagtt 39435040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1871 - 1926
Target Start/End: Original strand, 42090406 - 42090461
Alignment:
Q  1871 tatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||| ||||||||||| ||||||||| |||||||| |||||||||||||| ||||    
T  42090406 tatatatgagttttgctggaagacaccttttatgaaagtgtcttttagcaaattat 42090461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 1750071 - 1750025
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  1750071 gttttgctagaagacacattttatgaaggtgtcttttagcaggttat 1750025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 25880576 - 25880622
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  25880576 gttttgctagaagacactttttatgaaggtgttttttagcaagttat 25880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 44539915 - 44539843
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||| ||||||| |||||||||||||||| | ||| |||||| ||| |||||||| |||||||||    
T  44539915 tttatgaaggtgtattttagcaaagttataactaaaaaatggat-atcacaccttaaggtgtggcttgctaaaa 44539843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 39961693 - 39961645
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  39961693 gagttttgctagaagatacattttatgaaggtgtcttttaacaagttat 39961645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 11675278 - 11675345
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  11675278 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 11675345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 24314202 - 24314261
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || ||||||||| || ||||| ||||| ||||||||||||||||| ||||    
T  24314202 tatatatatatgggttttgctaaaatacaccttttataaaggtgtcttttagcaaattat 24314261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 34082692 - 34082759
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  34082692 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 34082759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 38127012 - 38126973
Alignment:
Q  598 atgacaaaattcttcctcaagagatctaacattgttacat 637  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  38127012 atgacaaaattcttcctcaaaagatttaacattgttacat 38126973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 39089269 - 39089210
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||| ||||||||||| |||||||| |||||||||| ||||||||    
T  39089269 tatatatatataggttttgttagaagacaccttttatgaatgtgtcttttaacaagttat 39089210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1960
Target Start/End: Complemental strand, 1749990 - 1749929
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtg 1960  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||| ||| |||||||||||    
T  1749990 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aattacaccttgaggtgtg 1749929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1943
Target Start/End: Complemental strand, 2969720 - 2969675
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataa 1943  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||    
T  2969720 tttatgaaggtgtcttttagcaaagttataactaaaaggtggataa 2969675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 29512144 - 29512111
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  29512144 gaaggtgtgttttagcaagttataactaaaaagt 29512111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Complemental strand, 44539996 - 44539951
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||| ||||||||| | |||||||||||||| |||||||||||||    
T  44539996 ttttgttagaagacatcttttatgaaggtgtcatttagcaagttat 44539951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-28; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-28
Query Start/End: Original strand, 1880 - 1973
Target Start/End: Complemental strand, 23129693 - 23129600
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||| ||||| ||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23129693 gttttgttagaatacacattttatgaaggtgtcttttaacaagttataactaaaaggttgataatcacatcttgaggtgtggattgctaaaaga 23129600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 27365797 - 27365869
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27365797 tttataaaggtgtcttttagcaagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaa 27365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 19863217 - 19863111
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1966  Q
    ||||||||| || |||||||| ||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||||||||  ||||| ||||||||||    
T  19863217 tatatatatatgggttttgctggaagacactttttgtgaaggtgtcttttaacaagttaaaactaaaaagtggataatcacactttgagatgtggattgc 19863118  T
Q  1967 taaaaga 1973  Q
    |||||||    
T  19863117 taaaaga 19863111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1900 - 1973
Target Start/End: Original strand, 19995358 - 19995431
Alignment:
Q  1900 ttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  19995358 ttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaaga 19995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 13960455 - 13960382
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||| |||||||||||    
T  13960455 tttatgaaggtgtcttttagcaagtttatgactaaaaagtggataatcacatcttgaggtgttgattgctaaaa 13960382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 16490996 - 16490924
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  16490996 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaa 16490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1962
Target Start/End: Complemental strand, 5497820 - 5497757
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtgga 1962  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  5497820 tttatgaaagtgtctttcagcaagttataactaaaaagttgataatcacaccttgaagtgtgga 5497757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 17689416 - 17689342
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  17689416 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttaaggtgtggattgctaaaaga 17689342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 16273723 - 16273677
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16273723 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 16273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 21913904 - 21913858
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21913904 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 21913858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 18015724 - 18015807
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||||| ||||||||||| || |||||    
T  18015724 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaagacatcttcat 18015807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 16490826 - 16490721
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| |  |||||||||||||||||| ||||||||| ||||||||| | ||||||| |||||||||| || ||||||| ||| |||||||| |||    
T  16490826 tatatatatataggttttgctagaagacaccttttatgaagatgtcttttaccaaagttat-actaaaaagtgga-aatcacaccttaaggtgtgggttg 16490729  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  16490728 ctaaaaga 16490721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 19323871 - 19323812
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19323871 tatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 19323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 23204458 - 23204532
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||  |||||||||||    
T  23204458 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgacttgctaaaaga 23204532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1875 - 1926
Target Start/End: Original strand, 27365711 - 27365762
Alignment:
Q  1875 tgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  27365711 tgtgtgttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 27365762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1909 - 1973
Target Start/End: Original strand, 25593283 - 25593347
Alignment:
Q  1909 tgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||| |||||||  |||||||||||    
T  25593283 tgtcttttagcaagttataactaaaaagtggataattacaccttaaggtgtgagttgctaaaaga 25593347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 9741807 - 9741881
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  9741807 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaaga 9741881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 20269221 - 20269280
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||  ||||||||||||||| | ||||||||||||||||||||||||||||    
T  20269221 tatatatatatggattttgctagaagacagcttttatgaaggtgtcttttagcaagttat 20269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 23204364 - 23204423
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  23204364 tatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttaacaagttat 23204423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 28038375 - 28038316
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||  |||||||| |||||||||||||||||||    
T  28038375 tatatatatatgggttttgctagaagacacattttatgaaagtgtcttttagcaagttat 28038316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 28813135 - 28813061
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| |||| |||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  28813135 tttataaaggcgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 28813061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 37172563 - 37172504
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  37172563 tatatatatgtgggtttggctagaagtcaccttttatgaaggtgtcttttaacaagttat 37172504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1867 - 1925
Target Start/End: Complemental strand, 31056543 - 31056485
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1925  Q
    |||||||| | | |||||||||||||||||| ||||||||||||| |||||||||||||    
T  31056543 tatatataggggggttttgctagaagacaccttttatgaaggtgtattttagcaagtta 31056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 38758778 - 38758732
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  38758778 gttttgctagaagacacattttatgaaggtgtcttttagcaagttat 38758732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1867 - 1931
Target Start/End: Complemental strand, 15388281 - 15388217
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1931  Q
    ||||||||| |  |||||||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  15388281 tatatatatataggttttgctagaacacaccttttataaatgtgtcttttagcaagttataacta 15388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 38293555 - 38293472
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    |||||||| |||||||||| ||| |||||||||||||||| || ||||||| | |||||||||||||| ||||||| || |||||    
T  38293555 tttatgaacgtgtcttttaacaaagttataactaaaaagtgga-aatcacaccatgaggtgtggattgttaaaagacatcttcat 38293472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 18015631 - 18015689
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  18015631 tatatatatatgggttttgctaga-gacaccttatatgaaggtgtcttttagcaagttat 18015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 19323777 - 19323703
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||||||||||||| |||||||||||||||| ||| |||||| ||| |||||||  |||||||||||    
T  19323777 tttatgaaagtgtcttttagcaaagttataactaaaaagtggat-atcacaccttaaggtgtgccttgctaaaaga 19323703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1887 - 1926
Target Start/End: Complemental strand, 31042674 - 31042635
Alignment:
Q  1887 tagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  31042674 tagaagacaccctttatgaaggtgtattttagcaagttat 31042635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 33429313 - 33429254
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||  | |||||||||||||||||  |||||||||||| |||||||||||||||    
T  33429313 tatatatattagggttttgctagaagacacattttatgaaggtgccttttagcaagttat 33429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 37172469 - 37172395
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||| ||  ||||||||||||||| || ||||||| ||| |||| |||||||||||||||    
T  37172469 tttatgaaggtgtcttttagaaaaattataactaaaaagt-gaaaatcacaccttaaggtatggattgctaaaaga 37172395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 38758698 - 38758624
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| ||||||||||||| ||| |||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  38758698 tttataaaggtgtcttttaacaaagttataactaaaaagt-gaaaatcacaccttgagatgtgggttgctaaaaga 38758624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 13960535 - 13960489
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||    
T  13960535 gtttcgctagaagacactttttatgaaggtgtcttttagcaagttat 13960489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1899 - 1945
Target Start/End: Complemental strand, 31042600 - 31042554
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatc 1945  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||    
T  31042600 tttattaaagtgtcttttagcaagttataacaaaaaagttgataatc 31042554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1899 - 1945
Target Start/End: Complemental strand, 31056449 - 31056403
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatc 1945  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||    
T  31056449 tttattaaagtgtcttttagcaagttataattaaaaagttgataatc 31056403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 2695223 - 2695290
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  2695223 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 2695290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1946
Target Start/End: Original strand, 19858480 - 19858527
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1946  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  19858480 tttatgaaaatgtcttttaacaagttataactaaaaagtggataatca 19858527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 9741726 - 9741772
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  9741726 gttttgctagaagacacattttatgaaggtgtcttttaacaaattat 9741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1905 - 1971
Target Start/End: Complemental strand, 14369820 - 14369754
Alignment:
Q  1905 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  14369820 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 14369754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 16994297 - 16994251
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  |||||||||||||  |||||||||||||    
T  16994297 gttttgctagaagacacattttatgaaggtgttgtttagcaagttat 16994251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1958
Target Start/End: Complemental strand, 19325115 - 19325055
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa--gttataactaaaaagttgataatcacaacttgaggtg 1958  Q
    |||||||||||||||||||||||   ||||||||||||||| || ||||||| |||||||||    
T  19325115 tttatgaaggtgtcttttagcaaagtttataactaaaaagtgga-aatcacaccttgaggtg 19325055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 26730381 - 26730310
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||||| |||||||||||||||   ||| ||||| | |||||||||| | |||||||||    
T  26730381 tttatgaaggtgtcttttagcaaagttataactaaaa--gtgaaaatcaaaccttgaggtgtaggttgctaaaa 26730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1913 - 1943
Target Start/End: Complemental strand, 37468730 - 37468700
Alignment:
Q  1913 ttttagcaagttataactaaaaagttgataa 1943  Q
    |||||||||||||||||||||||||||||||    
T  37468730 ttttagcaagttataactaaaaagttgataa 37468700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 17421748 - 17421715
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  17421748 gaaggtgtgttttagcaagttataactaaaaagt 17421715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 22701871 - 22701904
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  22701871 gaaggtgtgttttagcaagttataactaaaaagt 22701904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 25912170 - 25912203
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  25912170 gaaggtgtgttttagcaagttataactaaaaagt 25912203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 31240372 - 31240405
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  31240372 gaaggtgtgttttagcaagttataactaaaaagt 31240405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 31752170 - 31752137
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  31752170 gaaggtgtgttttagcaagttataactaaaaagt 31752137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 33832770 - 33832737
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  33832770 gaaggtgtgttttagcaagttataactaaaaagt 33832737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 39548968 - 39549001
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  39548968 gaaggtgtgttttagcaagttataactaaaaagt 39549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-27; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-27
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 3210974 - 3210868
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| || ||| ||| |||||||||||| |||    
T  3210974 tatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaaagttataattaaaaagtgga-aataacaccttgaggtgtgggttg 3210876  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  3210875 ctaaaaga 3210868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 12176281 - 12176207
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12176281 tttatcaaggtgtcttttagcaggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 12176207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 12420709 - 12420635
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12420709 tttatcaaggtgtcttttagcaggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaga 12420635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-24
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 16645587 - 16645481
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| || ||||||| |||||||| ||| |||    
T  16645587 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagtaaagttataactaaaaagtgga-aatcacaccttgaggtatgggttg 16645489  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  16645488 ctaaaaga 16645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 42806293 - 42806376
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||| | ||||||    
T  42806293 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaagacactttcat 42806376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 1271097 - 1271025
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||| ||||| ||||||||||    
T  1271097 tttatgaaggtgtcttttaacaagttataattaaaaagtggataatcacaccttgaagtgtgaattgctaaaa 1271025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 10078292 - 10078351
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  10078292 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 10078351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1880 - 1937
Target Start/End: Complemental strand, 39590032 - 39589974
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagt 1937  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  39590032 gttttgctagaagacaccttttatgaaggtgtcttttagcaaagttataactaaaaagt 39589974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1899 - 1948
Target Start/End: Original strand, 40301373 - 40301422
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcaca 1948  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40301373 tttatgaaggtgtcttttagcaagttataactaaaaagtggataatcaca 40301422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 1271195 - 1271136
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  1271195 tatatatatatgagttttgctagaagacaccctttataaaggtgttttttaacaagttat 1271136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Original strand, 16784330 - 16784377
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16784330 agttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 16784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 16930879 - 16930805
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| |||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  16930879 tttatgaaagtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaaga 16930805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 19922592 - 19922666
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||||||||| |||||||||||    
T  19922592 tttatgaaggtgtcttttagcaaagttataactaaaaggtgga-aatcacaccttgaggtgtgggttgctaaaaga 19922666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 23472595 - 23472669
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||| |||||||||||||    
T  23472595 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagttgtagattgctaaaaga 23472669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 30774113 - 30774172
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  30774113 tatatatatatgggttttgctagaagacaccttttatgaaggtgttttttagcaagttat 30774172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 42806197 - 42806256
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42806197 tatatatatatgagttttgctagaagacaccttttatgaagatgtcttttagcaaattat 42806256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1899 - 1972
Target Start/End: Complemental strand, 22812397 - 22812324
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaag 1972  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| ||||||||||    
T  22812397 tttatgaaggtgtcttttaacaaagttataactaaaaagt-gaaaatcacatcttgaggtgtgggttgctaaaag 22812324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 38498406 - 38498360
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38498406 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 38498360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 26912397 - 26912325
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||    
T  26912397 tttatgaaggtgtcttttagcaaagttataactgaaaag-tgaaaatcacaccttgaggtgtgggttgctaaaa 26912325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 33568143 - 33568071
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||||||||||| |||||||||||||| |  | ||||||| ||||||||||||||||||||||    
T  33568143 tttatgaaggtgtcttttagcaaagttataactaaaaaataaa-aatcacaccttgaggtgtggattgctaaaa 33568071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Original strand, 9478793 - 9478876
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||||  ||||||||||| ||||||||||| || |||||    
T  9478793 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacactttgaggtgtgggttgctaaaagatatcttcat 9478876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1882 - 1926
Target Start/End: Complemental strand, 14371658 - 14371614
Alignment:
Q  1882 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14371658 tttgctagaagacaccttttatgaaggtgtcttttagcaagttat 14371614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 9479402 - 9479461
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||    
T  9479402 tatatatatatgggttttgttagaagacacattttatgaaggtgtcttttagcaagttat 9479461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1961
Target Start/End: Complemental strand, 12295241 - 12295179
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtgg 1961  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  12295241 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgg 12295179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1871 - 1926
Target Start/End: Original strand, 44873904 - 44873959
Alignment:
Q  1871 tatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  44873904 tatatatgagttttgttagaagacaccttttatgaaggtgttttttagcaagttat 44873959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 12176362 - 12176316
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12176362 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 12420790 - 12420744
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12420790 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1959
Target Start/End: Complemental strand, 38498325 - 38498265
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgt 1959  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||    
T  38498325 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgt 38498265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1880 - 1920
Target Start/End: Original strand, 23472515 - 23472555
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagca 1920  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23472515 gttttgctagaagacaccttttatgaaggtgtcttttagca 23472555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 254025 - 253951
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||| ||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||| | |||||||||||    
T  254025 tttaggaaagtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 253951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 661833 - 661907
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||| ||| |||||||||||||| |||||||||||||||| || ||||||| |||||||||| | |||||||||||    
T  661833 tttaggaaagtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 661907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 10078386 - 10078457
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||  ||  |||||||||| || ||||||| |||||||||||| |||||||||||    
T  10078386 tttatgaaggtgtcttttagcaaagta--actaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 10078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 27545888 - 27545955
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| |||||||||||    
T  27545888 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagattgctaaaa 27545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 28539245 - 28539319
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| |  ||||| ||||| |||||||||||    
T  28539245 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcaaacattgagatgtgggttgctaaaaga 28539319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1880 - 1931
Target Start/End: Original strand, 38071134 - 38071185
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttataacta 1931  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  38071134 gttttgctaaaagacacattttatgaatgtgtcttttagcaagttataacta 38071185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1887 - 1926
Target Start/End: Complemental strand, 39077432 - 39077393
Alignment:
Q  1887 tagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  39077432 tagaagacaccttttatgaaggtgtcttttagcaagttat 39077393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 16930960 - 16930914
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  16930960 gttttgatagaagataccttttatgaaggtgtcttttagcaagttat 16930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Complemental strand, 12295321 - 12295276
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||    
T  12295321 ttttgctataagacaccttttatgaatgtgtcttttagcaagttat 12295276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Complemental strand, 13327084 - 13327039
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||    
T  13327084 ttttgctagaagacacattttatgaaggtatcttttagcaagttat 13327039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 41624726 - 41624643
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    |||| |||||||||||||| ||| ||||||||||||||||  | ||||||| |||||||||||  ||||||||||| | ||||||    
T  41624726 tttacgaaggtgtcttttaacaaagttataactaaaaagtaaa-aatcacaccttgaggtgtgagttgctaaaagacactttcat 41624643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Original strand, 5224299 - 5224346
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  5224299 agttttgctataagacactttttatgaaggtgtcttttaacaagttat 5224346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1946
Target Start/End: Complemental strand, 13327005 - 13326958
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatca 1946  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||    
T  13327005 tttatgaagttgtcttttatcaagttataactaaaaagtgaataatca 13326958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 26912491 - 26912432
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||| | || |||||||||||||||||  |||||||| |||||||||| ||||||||    
T  26912491 tatatatgtatgggttttgctagaagacacattttatgaatgtgtcttttaacaagttat 26912432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Complemental strand, 29125778 - 29125711
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  29125778 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 29125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1937
Target Start/End: Complemental strand, 39077358 - 39077319
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1937  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  39077358 tttatgaaggtgtcttttagcaaagttataactaaaaagt 39077319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Complemental strand, 40067709 - 40067662
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||||    
T  40067709 agtttttctagaagacatcatttatgaatgtgtcttttagcaagttat 40067662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Original strand, 44473747 - 44473794
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||| ||||||||| | || |||||||||||||||||||||||||    
T  44473747 agttttgttagaagacatctttcatgaaggtgtcttttagcaagttat 44473794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1908 - 1973
Target Start/End: Original strand, 847640 - 847705
Alignment:
Q  1908 gtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||| |||| ||||||||||| || ||||||| |||||||||| | |||||||||||    
T  847640 gtgtcttttagcaaagttaaaactaaaaagt-gaaaatcacaccttgaggtgtaggttgctaaaaga 847705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1960
Target Start/End: Original strand, 5224381 - 5224441
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtg 1960  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  5224381 tttatgaaggtgt-ttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtg 5224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1913 - 1959
Target Start/End: Original strand, 14819297 - 14819343
Alignment:
Q  1913 ttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1959  Q
    |||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  14819297 ttttagcaagttataactaaaaagttaataaacacaccttaaggtgt 14819343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1905 - 1971
Target Start/End: Complemental strand, 26043008 - 26042942
Alignment:
Q  1905 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  26043008 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 26042942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1869 - 1926
Target Start/End: Complemental strand, 1983645 - 1983588
Alignment:
Q  1869 tatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||| |||||||| || ||||||||  ||||||||||||||||||| ||| ||||    
T  1983645 tatatatatgagttttactggaagacacattttatgaaggtgtcttttaacaaattat 1983588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 13269302 - 13269269
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  13269302 gaaggtgtgttttagcaagttataactaaaaagt 13269269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 13290624 - 13290657
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  13290624 gaaggtgtgttttagcaagttataactaaaaagt 13290657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1955
Target Start/End: Original strand, 14041412 - 14041468
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgag 1955  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| |||||| ||||||    
T  14041412 tttatgaaggtgtcttttaacaaagttataactaaaaagtggat-atcacaccttgag 14041468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 25127999 - 25128032
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  25127999 gaaggtgtgttttagcaagttataactaaaaagt 25128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 28969175 - 28969103
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| || ||||||| ||| |||||||||||||||| || ||||||| ||||| |||||| |||||||||    
T  28969175 tttatgaaagtatcttttaacaaagttataactaaaaagtgga-aatcacaccttgaagtgtgggttgctaaaa 28969103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 30633133 - 30633100
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  30633133 gaaggtgtgttttagcaagttataactaaaaagt 30633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 38092183 - 38092255
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||| |||| ||| |||||||||||||||| || ||||||| ||||| ||||||||| ||||||    
T  38092183 tttatgaacgtgtcatttaacaaagttataactaaaaagtgga-aatcacaccttgatgtgtggattactaaaa 38092255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 40067627 - 40067555
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||| ||||| |||  ||||||||||||||| || ||||||| |||||||||||  |||||||||    
T  40067627 tttatgaaggtgtattttaacaaaattataactaaaaagtgga-aatcacatcttgaggtgtgagttgctaaaa 40067555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-26; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 43837768 - 43837694
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  43837768 tttatgaaggtgtcctttagcaagttataactaaaaagtggataatcacaccttgaggtgtggattgctaaaaga 43837694  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 47960373 - 47960290
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||| |||||||||||| | ||||||    
T  47960373 tttatgaaggtgtcttttagcaagttataactaaaaaatggataatctcaccttgaggtgtgaattgctaaaagacactttcat 47960290  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 53773764 - 53773689
Alignment:
Q  1899 tttatgaaggtgtctttt-agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  53773764 tttatgatggtgtctttttagcaagttataactaaaaagttgataatcacaccttgaagtgttgattgctaaaaga 53773689  T

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Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 1899 - 1947
Target Start/End: Original strand, 26889493 - 26889541
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcac 1947  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26889493 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcac 26889541  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 1902 - 1973
Target Start/End: Complemental strand, 34041267 - 34041196
Alignment:
Q  1902 atgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  34041267 atgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaacttgaggtgtgggttgctaaaaga 34041196  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 42434307 - 42434224
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||| |||||||||| | ||||||    
T  42434307 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggaatgctaaaagacactttcat 42434224  T

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Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 7645991 - 7645886
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| ||||||  |||| |||    
T  7645991 tatatatatatg-gttttgcttgaagacaccttttatgaaggtatcttttagcaaagttataactaaaaag-tgaaaatcacaccttgagccgtgggttg 7645894  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  7645893 ctaaaaga 7645886  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 34728298 - 34728224
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  34728298 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 34728224  T

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Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 42560235 - 42560130
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1966  Q
    ||||||||| || ||||| |||||| ||||  ||||||||| ||| ||||| ||||||||||||||||||| ||||||||||  || || ||||||||||    
T  42560235 tatatatatatg-gttttactagaacacacattttatgaagatgtattttaacaagttataactaaaaagtggataatcacactttaagctgtggattgc 42560137  T
Q  1967 taaaaga 1973  Q
    |||||||    
T  42560136 taaaaga 42560130  T

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Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1899 - 1975
Target Start/End: Original strand, 19329441 - 19329517
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagaga 1975  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||||||    
T  19329441 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaagaga 19329517  T

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Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1865 - 1926
Target Start/End: Original strand, 20835692 - 20835753
Alignment:
Q  1865 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20835692 tttatatatatatgggttttgctataagacaccttttatgaaggtgtcttttagcaagttat 20835753  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 11020426 - 11020352
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||||    
T  11020426 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgagatgtgggttgctaaaaga 11020352  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 27907071 - 27907145
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||  ||||||||||    
T  27907071 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggctgctaaaaga 27907145  T

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Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 32626140 - 32626066
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  32626140 tttatgaagttgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 32626066  T

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Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 32868066 - 32868140
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  32868066 tttatgaaggtgtgttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattactaaaaga 32868140  T

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Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1922
Target Start/End: Original strand, 33117501 - 33117556
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  33117501 tatatatatgtgagttttgctagaagataccttttatgaaggtgtattttagcaag 33117556  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 51682637 - 51682563
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  51682637 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 51682563  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 51702538 - 51702612
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  51702538 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 51702612  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1880 - 1927
Target Start/End: Original strand, 54158117 - 54158164
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttata 1927  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  54158117 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttata 54158164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1901 - 1971
Target Start/End: Original strand, 7603629 - 7603699
Alignment:
Q  1901 tatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||| ||||  ||||||||||    
T  7603629 tatgaagatgtcttttagcaatttataactaaaaagtttataatcacaccttgatgtgtaaattgctaaaa 7603699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 34728379 - 34728333
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34728379 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 34728333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 5975643 - 5975702
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||  ||||||||||||||||  ||||||||||||||||||||||||||||    
T  5975643 tatatatatatggattttgctagaagacacattttatgaaggtgtcttttagcaagttat 5975702  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 6137341 - 6137415
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||  ||||||||||  |||||||||||    
T  6137341 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacacattgaggtgtgagttgctaaaaga 6137415  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1969
Target Start/End: Complemental strand, 6944638 - 6944568
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1969  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||| ||||||| ||||||||    
T  6944638 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttaaggtgtgaattgctaa 6944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 32090135 - 32090076
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||| | ||||||||||||||||||||||||||||    
T  32090135 tatatatatataggttttgctagaagacatcttttatgaaggtgtcttttagcaagttat 32090076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 38427241 - 38427182
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  38427241 tatatatatatatgttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 38427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 40875293 - 40875367
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| | ||| |||||||| |||||||||||    
T  40875293 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcaaaccttaaggtgtgggttgctaaaaga 40875367  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 52344575 - 52344650
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagtt-ataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| ||||||||||||||||| |||| |||||||| ||| ||| || |||||||||||| |||||||||||    
T  52344575 tttatgaatgtgtcttttagcaagtttataattaaaaagtggatgatctcaccttgaggtgtgggttgctaaaaga 52344650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 849315 - 849241
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||| ||||||||||||||||||||||||||||||||||   |||| ||| ||||| |||| | |||||||||||    
T  849315 tttaggaaggtgtcttttagcaagttataactaaaaagtgagtaattacatcttgaagtgtaggttgctaaaaga 849241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 6137260 - 6137306
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  6137260 gttttgctagaagacaccttttatgaatgtgtcttttagcaagttat 6137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 43837849 - 43837803
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  43837849 gttttgctagaagacaccttttatgaaggtgtcgtttagcaagttat 43837803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 48860882 - 48860836
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  48860882 gttttgctagaagacaccttttataaaggtgtcttttagcaagttat 48860836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Original strand, 20503514 - 20503586
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||| ||||||| |||| |||||||||    
T  20503514 tttataaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgggttgctaaaa 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Complemental strand, 38963400 - 38963355
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  38963400 ttttgctagaagacaccttttatgaatgtgtcttttagcaagttat 38963355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1899 - 1982
Target Start/End: Complemental strand, 32090041 - 32089958
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    |||||||| |||||||||| ||| |||||||||||||||| || ||||||| || ||||||||| ||||||||||| || |||||    
T  32090041 tttatgaatgtgtcttttaacaaagttataactaaaaagt-gaaaatcacacctcgaggtgtgggttgctaaaagacatcttcat 32089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 13387065 - 13387139
Alignment:
Q  1899 tttatgaaggtgtcttttagca-agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||| |||||||||||||| | ||| ||||||| |||||||||||  ||| |||||||    
T  13387065 tttatgaaggtgtcttttagcatagttataactaaaatg-tgaaaatcacaccttgaggtgtgtgttgttaaaaga 13387139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 20835788 - 20835862
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||| |||||||||||||||||| |||||||||||||| | || ||||||  |||||||||||| |||||||||||    
T  20835788 tttacgaaggtgtcttttagcaaagttataactaaaaaatgga-aatcaccccttgaggtgtgggttgctaaaaga 20835862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 28589315 - 28589241
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||| ||| ||||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||| |||||||    
T  28589315 tttatgaagatgttttttagcaaagttataactaaaaag-tgaaaatcacaccttgaggtatggattgttaaaaga 28589241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1878 - 1925
Target Start/End: Complemental strand, 34041353 - 34041306
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagtta 1925  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||    
T  34041353 gagttttgctagaagacacattttatgaatgtgtcttttagcaagtta 34041306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1961
Target Start/End: Complemental strand, 38427147 - 38427085
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtgg 1961  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||||||||    
T  38427147 tttatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttaaggtgtgg 38427085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 40479928 - 40480002
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| ||||||| |||  |||||||||||    
T  40479928 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgagttgctaaaaga 40480002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1887 - 1926
Target Start/End: Complemental strand, 47960447 - 47960408
Alignment:
Q  1887 tagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47960447 tagaagacaccttttatgaaggtgtcttttagcaagttat 47960408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 51682731 - 51682672
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| |  |||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  51682731 tatatatatataggttttgctagaaaacaccttttatgaaggtgttttttagcaagttat 51682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 13386984 - 13387030
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||    
T  13386984 gttttgctagaagacacattttataaaggtgtcttttagcaagttat 13387030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 22254223 - 22254269
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||    
T  22254223 gttttgctagaagacattttttatgaaggtgtcttttagcaagttat 22254269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 51702457 - 51702503
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  51702457 gttttgctagaagacacctcttatgaaagtgtcttttagcaagttat 51702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1899 - 1963
Target Start/End: Complemental strand, 16467235 - 16467171
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggat 1963  Q
    ||||||||||| ||||||| ||| |||||||||||||||| || ||||||| ||||||||||||||    
T  16467235 tttatgaaggtatcttttaacaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggat 16467171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1890 - 1926
Target Start/End: Complemental strand, 32626211 - 32626175
Alignment:
Q  1890 aagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32626211 aagacaccttttatgaaggtgtcttttagcaagttat 32626175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1937
Target Start/End: Original strand, 5975737 - 5975776
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1937  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5975737 tttatgaaggtgtcttttagcaaagttataactaaaaagt 5975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 13372453 - 13372527
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||| | |||||||||| | ||| |||||||    
T  13372453 tttatgaaggtgtcttttagcaaagttataacaaaaaagtgga-aatcataccttgaggtgtaggttgttaaaaga 13372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 13382654 - 13382728
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||| | |||||||||| | ||| |||||||    
T  13382654 tttatgaaggtgtcttttagcaaagttataacaaaaaagtgga-aatcataccttgaggtgtaggttgttaaaaga 13382728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Complemental strand, 26335812 - 26335745
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  26335812 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 26335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 52437566 - 52437633
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  52437566 gaaggtgtgttttagcaagttataactaaaaagtggttaaatacaccttaaggtgtagtttgctaaaa 52437633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 11020507 - 11020461
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| || |||||||| ||||||||||||| ||||||||||||||    
T  11020507 gttttgttaaaagacaccttttatgaaggtgtgttttagcaagttat 11020461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1913 - 1959
Target Start/End: Complemental strand, 17181181 - 17181135
Alignment:
Q  1913 ttttagcaagttataactaaaaagttgataatcacaacttgaggtgt 1959  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||    
T  17181181 ttttagcaagttataactaaaaagttaataaatacaacttaaggtgt 17181135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1922
Target Start/End: Original strand, 20503433 - 20503475
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||    
T  20503433 gttttgctagaaggcaccttttatgaaggtgttttttagcaag 20503475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 42434388 - 42434342
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||    
T  42434388 gttttgttagaagacaccttttaggaaggtgttttttagcaagttat 42434342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1937
Target Start/End: Complemental strand, 50678018 - 50677980
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  50678018 tttattaaggtgtgttttagcaagttataactaaaaagt 50677980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1867 - 1921
Target Start/End: Original strand, 53773645 - 53773699
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaa 1921  Q
    ||||||||| |  ||||||||| |||||||||||  |||||||||||||||||||    
T  53773645 tatatatatataggttttgctaaaagacacccttcgtgaaggtgtcttttagcaa 53773699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 4712728 - 4712695
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  4712728 gaaggtgtgttttagcaagttataactaaaaagt 4712695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1867 - 1923
Target Start/End: Complemental strand, 13388060 - 13388006
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagt 1923  Q
    ||||||||| || |||||||||||||||| | ||||  |||||||||||||||||||    
T  13388060 tatatatatatgggttttgctagaagacatcattta--aaggtgtcttttagcaagt 13388006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-25; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 1881 - 1973
Target Start/End: Complemental strand, 2752749 - 2752657
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||    
T  2752749 ttttgctagaaaacaccttttatgaggctgtcttttagcaagttataactaaaaaactgataattacaccttgaggtgtggattgctaaaaga 2752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-24
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 1469802 - 1469696
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||| || ||||||| |||||||||||| |||    
T  1469802 tatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagaaaagctataactaaaaagtgga-aatcacaccttgaggtgtgggttg 1469704  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  1469703 ctaaaaga 1469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 17168237 - 17168311
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||    
T  17168237 tttatgaaggtgtcttttagcaagttataactaaaaaattgataatcacattttgaggtgtggattgttaaaaga 17168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-23
Query Start/End: Original strand, 1867 - 1982
Target Start/End: Complemental strand, 26284613 - 26284499
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || ||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  26284613 tatatatatatg-gttttgcaagaagacacctttcatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacaccttgaggtgtggattg 26284516  T
Q  1966 ctaaaagagattttcat 1982  Q
     ||||||| || |||||    
T  26284515 ttaaaagacatcttcat 26284499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Original strand, 9005416 - 9005475
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9005416 tatatatatatgaattttgctagaagacaccttttatgaaggtgtcttttagcaagttat 9005475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 8549637 - 8549565
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  8549637 tttatgaaggtgttttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaa 8549565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 1905 - 1973
Target Start/End: Complemental strand, 38509713 - 38509645
Alignment:
Q  1905 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| || |||||||||||||||| ||||||||||  ||||||||| |||||||||||||    
T  38509713 aaggtgtcttttatcatgttataactaaaaagtggataatcacacattgaggtgtagattgctaaaaga 38509645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 1627750 - 1627676
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||| || ||||||||    
T  1627750 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttactaaaaga 1627676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 24992940 - 24992866
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  24992940 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 24992866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Original strand, 26842799 - 26842904
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || ||||||||| |||||||  |||||||| |||||||||||| |||||||||||||||| | || |||||||  ||||||||||| |||    
T  26842799 tatatatatatg-gttttgctataagacacattttatgaaagtgtcttttagcaaagttataactaaaaaatgga-aatcacacattgaggtgtgggttg 26842896  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  26842897 ctaaaaga 26842904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 43939527 - 43939453
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| |||  ||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  43939527 tttatgaaggtgtcttttaacaaaattataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaaaga 43939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 49660369 - 49660443
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||  |||||||||||    
T  49660369 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacaacttgaggtgtgagttgctaaaaga 49660443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 1838736 - 1838661
Alignment:
Q  1899 tttatgaaggtgtcttttagc--aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||  |||||||||||||||||| || |||||||  ||||||||||| |||||||||||    
T  1838736 tttatgaaggtgtcttttagcaaaagttataactaaaaagtgga-aatcacacattgaggtgtgggttgctaaaaga 1838661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 2965030 - 2964972
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  2965030 tatatatatatg-gttttgctagaagacaccgtttatgaaggtgtcttctagcaagttat 2964972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 1875 - 1926
Target Start/End: Original strand, 9679712 - 9679763
Alignment:
Q  1875 tgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  9679712 tgtgggttttgctagaagacatcctttttgaaggtgtcttttagcaagttat 9679763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 25825454 - 25825408
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25825454 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttat 25825408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 44720066 - 44720112
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  44720066 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttat 44720112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 14463321 - 14463366
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  14463321 ttttgctagaagacaccttttatgaaggtgttttttagcaagttat 14463366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1920 - 1973
Target Start/End: Complemental strand, 48875159 - 48875107
Alignment:
Q  1920 aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  48875159 aagttataactaaaaagtaga-aatcacaacttgaggtgtgggttgctaaaaga 48875107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1865 - 1973
Target Start/End: Original strand, 22675114 - 22675221
Alignment:
Q  1865 tttatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggatt 1964  Q
    ||||||||| | ||| ||||||||||||||||| |||||  | ||||||||  | ||||||||||||||||   |||||||||| ||||||| |||| ||    
T  22675114 tttatatatgtatgaattttgctagaagacaccttttatagaagtgtctttatgtaagttataactaaaaa-aggataatcacaccttgaggcgtggctt 22675212  T
Q  1965 gctaaaaga 1973  Q
     ||||||||    
T  22675213 actaaaaga 22675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1878 - 1926
Target Start/End: Complemental strand, 26213857 - 26213809
Alignment:
Q  1878 gagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||    
T  26213857 gagttttgctagaagacacattttacgaaggtgtcttttagcaagttat 26213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Complemental strand, 1627831 - 1627784
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  1627831 agttttgctagaagacaccttttataaagatgtcttttagcaagttat 1627784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 1838830 - 1838771
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||||||||| ||||||||||  |||||||| ||||||||||| |||||||    
T  1838830 tatatatatatgagttttgttagaagacacattttatgaaagtgtcttttagtaagttat 1838771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 2964937 - 2964863
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||| |||||  ||||||||||||||| || ||| ||| |||||| |||||||||||||||||    
T  2964937 tttatgaaggtgtctttaagcaaaattataactaaaaagtgga-aatgacaccttgagatgtggattgctaaaaga 2964863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1908 - 1982
Target Start/End: Original strand, 9005517 - 9005591
Alignment:
Q  1908 gtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||  ||||||||||||||| || ||||||| ||||||||| |||||||||||||| || |||||    
T  9005517 gtgtcttttagcaaaattataactaaaaagt-gaaaatcacaccttgaggtgcggattgctaaaagacatattcat 9005591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 25825373 - 25825299
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||| ||||| |||| ||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  25825373 tttatggaggtgcctttcagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 25825299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 30414177 - 30414103
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||| | || ||| ||| |||||| ||||| |||||||||||    
T  30414177 tttatgaaggtgtcttttagcaaagttataactaaaaaatgga-aataacaccttgagatgtgggttgctaaaaga 30414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 42470582 - 42470656
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||| || ||||||| ||| |||||||||||||||| || ||||||| ||||||||||| ||||||||||||    
T  42470582 tttatgaatgtatcttttaacaaagttataactaaaaagtgga-aatcacaccttgaggtgtgaattgctaaaaga 42470656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 1406710 - 1406756
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||    
T  1406710 gttttgctagaagacacattttatgaaggtgtcttttagcaaattat 1406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1901 - 1982
Target Start/End: Original strand, 4105587 - 4105668
Alignment:
Q  1901 tatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagattttcat 1982  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||  || |||| || |||||||||||| | ||||||    
T  4105587 tatgaaggtgtcttttagcaaagttataactaaaaag-tgaaaatcacacattaaggtatgaattgctaaaagacactttcat 4105668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1899 - 1968
Target Start/End: Complemental strand, 10769844 - 10769775
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgcta 1968  Q
    |||||||||||| |||||| | |||||||||||||||||| || ||||||| ||| |||||||||||||||    
T  10769844 tttatgaaggtgccttttatccaagttataactaaaaagtgga-aatcacaccttcaggtgtggattgcta 10769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 30414258 - 30414212
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  30414258 gttttgctagaatacaccttttatgaaggtgttttttagcaagttat 30414212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 17168157 - 17168202
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||    
T  17168157 ttttgctagaagacaccaattatgaaggtgtcttttaacaagttat 17168202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Complemental strand, 30819668 - 30819623
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  30819668 ttttgctagaagacaccttttatgaaggtgttttttagcaaattat 30819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 40460983 - 40461028
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||    
T  40460983 ttttgatagaagacactttttatgaaggtgtcttttagcaagttat 40461028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1899 - 1942
Target Start/End: Original strand, 47921642 - 47921686
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgata 1942  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  47921642 tttatgaaggtgtcttttagcaaagttataactaaaaagtggata 47921686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 158541 - 158608
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  158541 gaaggtgtgttttagcaagttataactaaaaagtagctaaatacaccttaaggtgttgcttgctaaaa 158608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 463439 - 463506
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  463439 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 463506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1937
Target Start/End: Complemental strand, 7336133 - 7336094
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagt 1937  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7336133 tttatgaaggtgtcttttagcaaagttataactaaaaagt 7336094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 13157686 - 13157753
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  13157686 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 13157753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1867 - 1922
Target Start/End: Complemental strand, 17453065 - 17453010
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    ||||||||| || ||||| || ||||||||  ||||||||||||||||||||||||    
T  17453065 tatatatatatgggttttactcgaagacactttttatgaaggtgtcttttagcaag 17453010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1879 - 1926
Target Start/End: Complemental strand, 25671134 - 25671087
Alignment:
Q  1879 agttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||| ||||||   ||||||||||||||||||||||||||||    
T  25671134 agttttgctaaaagacatattttatgaaggtgtcttttagcaagttat 25671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 27787927 - 27787994
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  27787927 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 27787994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Complemental strand, 33675890 - 33675823
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  33675890 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacatcttaaggtgtagcttgctaaaa 33675823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1903 - 1937
Target Start/End: Original strand, 24770755 - 24770789
Alignment:
Q  1903 tgaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    ||||||||| |||||||||||||||||||||||||    
T  24770755 tgaaggtgtgttttagcaagttataactaaaaagt 24770789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1899 - 1972
Target Start/End: Original strand, 26897335 - 26897407
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaag 1972  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||| ||| |||||||| ||||||||||    
T  26897335 tttatgaagatgttttttagcaaagttataactaaaaagtgga-aatcacaccttaaggtgtgg-ttgctaaaag 26897407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1905 - 1971
Target Start/End: Original strand, 34515258 - 34515324
Alignment:
Q  1905 aaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  34515258 aaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 34515324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1913 - 1955
Target Start/End: Original strand, 36630440 - 36630482
Alignment:
Q  1913 ttttagcaagttataactaaaaagttgataatcacaacttgag 1955  Q
    |||||||||||||||| |||||||| |||||||||| ||||||    
T  36630440 ttttagcaagttataattaaaaagtggataatcacatcttgag 36630482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Complemental strand, 38509776 - 38509730
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||||||  ||||||||||||||||||||||| ||||    
T  38509776 gttttgttagaagacacattttatgaaggtgtcttttagcaaattat 38509730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1903 - 1937
Target Start/End: Complemental strand, 41146320 - 41146286
Alignment:
Q  1903 tgaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    ||||||||| |||||||||||||||||||||||||    
T  41146320 tgaaggtgtgttttagcaagttataactaaaaagt 41146286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 49659892 - 49659938
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||| ||||||||||| || |||||||||| ||||||||||||||    
T  49659892 gttttgttagaagacacctttcatgaaggtgttttttagcaagttat 49659938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1903 - 1937
Target Start/End: Original strand, 50559375 - 50559409
Alignment:
Q  1903 tgaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    ||||||||| |||||||||||||||||||||||||    
T  50559375 tgaaggtgtgttttagcaagttataactaaaaagt 50559409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 5226801 - 5226846
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||| |||||||  ||||||||||||||||||| ||||||||    
T  5226801 ttttgctaaaagacacattttatgaaggtgtcttttaacaagttat 5226846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 5491728 - 5491761
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  5491728 gaaggtgtgttttagcaagttataactaaaaagt 5491761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1880 - 1921
Target Start/End: Complemental strand, 7336214 - 7336173
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaa 1921  Q
    |||||||||||||||||  ||||| |||||||||||||||||    
T  7336214 gttttgctagaagacacattttattaaggtgtcttttagcaa 7336173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 13264600 - 13264567
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  13264600 gaaggtgtgttttagcaagttataactaaaaagt 13264567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 16005633 - 16005600
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  16005633 gaaggtgtgttttagcaagttataactaaaaagt 16005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Original strand, 26843124 - 26843157
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  26843124 gaaggtgtgttttagcaagttataactaaaaagt 26843157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 593 - 634
Target Start/End: Complemental strand, 38230980 - 38230939
Alignment:
Q  593 aattgatgacaaaattcttcctcaagagatctaacattgtta 634  Q
    |||||||| |||||||||| |||||||||| |||||||||||    
T  38230980 aattgatggcaaaattctttctcaagagatttaacattgtta 38230939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 42199922 - 42199889
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  42199922 gaaggtgtattttagcaagttataactaaaaagt 42199889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 42208790 - 42208757
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  42208790 gaaggtgtattttagcaagttataactaaaaagt 42208757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 47921562 - 47921607
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||| || ||||||||||||| ||||| ||||||||    
T  47921562 ttttgctagaagacgccttttatgaaggtgttttttaacaagttat 47921607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 52; Significance: 6e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 52; E-Value: 6e-20
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Complemental strand, 8634 - 8529
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattg 1965  Q
    ||||||||| || ||||||||||||||| || ||||||||| ||||||||| | |||||||||||||||||| || ||||||| ||| ||||||||||||    
T  8634 tatatatatatg-gttttgctagaagacgccttttatgaagttgtcttttaacaaagttataactaaaaagtgga-aatcacaccttcaggtgtggattg 8537  T
Q  1966 ctaaaaga 1973  Q
    ||||||||    
T  8536 ctaaaaga 8529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1867 - 1973
Target Start/End: Original strand, 19143617 - 19143721
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgc 1966  Q
    ||||||||| |  |||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| || ||||||| |||||||| |||||| |    
T  19143617 tatatatatataggttttgctagaagataccttttatgaaggtgtcttttagcaa-atataactaaaaagtgga-aatcacaccttgaggtatggatttc 19143714  T
Q  1967 taaaaga 1973  Q
    |||||||    
T  19143715 taaaaga 19143721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-19
Query Start/End: Original strand, 1886 - 1971
Target Start/End: Complemental strand, 22423986 - 22423901
Alignment:
Q  1886 ctagaagacaccctttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||||||  |||||||| ||||  ||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||    
T  22423986 ctagaagacactttttatgaatgtgttctttagcaagttataattaaaaagttgataatcacacgttgaagtgtggattgctaaaa 22423901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 12159523 - 12159449
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  12159523 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtgggttgctaaaaga 12159449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-17
Query Start/End: Original strand, 1900 - 1973
Target Start/End: Original strand, 15081203 - 15081276
Alignment:
Q  1900 ttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  15081203 ttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 15081276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Complemental strand, 29427304 - 29427237
Alignment:
Q  1904 gaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  29427304 gaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtggattgctaaaa 29427237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 6322571 - 6322645
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||| |||||||||||||||||| || || |||| ||| ||||||||||||||||||||    
T  6322571 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aaccacaccttaaggtgtggattgctaaaaga 6322645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1880 - 1973
Target Start/End: Original strand, 28295551 - 28295647
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtctttt----agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||| | ||||||||||||||||||    |  |||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||    
T  28295551 gttttgctagaagacatcttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggata-tcacaccttgaggtgtggcttgctaaaaga 28295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1880 - 1973
Target Start/End: Complemental strand, 28516522 - 28516426
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtctttt----agcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||| | ||||||||||||||||||    |  |||||||||| ||||||| |||| ||||| |||||||||||| |||||||||||    
T  28516522 gttttgctagaagacatcttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggata-tcacaccttgaggtgtggcttgctaaaaga 28516426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1882 - 1926
Target Start/End: Complemental strand, 17347200 - 17347156
Alignment:
Q  1882 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  17347200 tttgctagaagacacattttatgaaggtgtcttttagcaagttat 17347156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 10075074 - 10075148
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||| ||| ||||||| |||||||| || ||||||| |||||||||||  |||||||||||    
T  10075074 tttatgaaggtgtcttttaacaaagttataattaaaaagtgga-aatcacaccttgaggtgtgagttgctaaaaga 10075148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 12159623 - 12159558
Alignment:
Q  1867 tatatatatgtgagttttgctagaag------acaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| ||||||||||||||||      ||||| ||||||||||||||||||||||||||||    
T  12159623 tatatatatatgagttttgctagaagtcgaagacaccttttatgaaggtgtcttttagcaagttat 12159558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 14975480 - 14975407
Alignment:
Q  1899 tttatgaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||||| |||||||| ||||| ||| ||||| | ||| |||||||| |||||||||||    
T  14975480 tttatgaaggtgttttttagcaaattataact-aaaaggtgaaaatcataccttaaggtgtgggttgctaaaaga 14975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 18096331 - 18096377
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  18096331 gttttgctagaagacatcttttgtgaaggtgtcttttagcaagttat 18096377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1881 - 1926
Target Start/End: Original strand, 10074994 - 10075039
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||    
T  10074994 ttttgctagaagacaccttttatgaaagtgtcttttaacaagttat 10075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1899 - 1971
Target Start/End: Complemental strand, 17347121 - 17347049
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||| ||||||||||| |||||||||||||||||| || ||||||| ||| | || |||||||||||||    
T  17347121 tttatgaagatgtcttttagcaaagttataactaaaaagtgga-aatcacaccttaaagtatggattgctaaaa 17347049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1921 - 1973
Target Start/End: Original strand, 18096429 - 18096480
Alignment:
Q  1921 agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  18096429 agttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 18096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1921 - 1973
Target Start/End: Original strand, 18102549 - 18102600
Alignment:
Q  1921 agttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  18102549 agttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 18102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1899 - 1969
Target Start/End: Original strand, 9533450 - 9533519
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaa 1969  Q
    ||||||||||||||||||| ||| ||||||| ||||| || || ||||||| ||||||||||||||||||||    
T  9533450 tttatgaaggtgtcttttaacaaagttataattaaaa-gtgga-aatcacaccttgaggtgtggattgctaa 9533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1913 - 1943
Target Start/End: Complemental strand, 9406786 - 9406756
Alignment:
Q  1913 ttttagcaagttataactaaaaagttgataa 1943  Q
    |||||||||||||||||||||||||||||||    
T  9406786 ttttagcaagttataactaaaaagttgataa 9406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 9891373 - 9891419
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  9891373 gttttgctagaagataccttttataaaggtgtcttttagcaaattat 9891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 14488364 - 14488331
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  14488364 gaaggtgtgttttagcaagttataactaaaaagt 14488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1867 - 1924
Target Start/End: Complemental strand, 30416552 - 30416495
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagtt 1924  Q
    ||||||||| | ||||||||||||||| || |||||||||||||  ||||| ||||||    
T  30416552 tatatatatatcagttttgctagaagatactctttatgaaggtgctttttaacaagtt 30416495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 33730587 - 33730554
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  33730587 gaaggtgtgttttagcaagttataactaaaaagt 33730554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 4e-18; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 1899 - 1970
Target Start/End: Original strand, 35135 - 35206
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaa 1970  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||    
T  35135 tttatgaaggtgtcttttagcaaagttataactaaaaagt-gaaaatcacaccttgaggtgtggattgctaaa 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 35054 - 35100
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  35054 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 35100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 1e-17; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Complemental strand, 94884 - 94810
Alignment:
Q  1899 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  94884 tttatgaaggtgtcttttagcaaagttataactaaaaagtgga-aatcacaccttgaggtgtgggttgctaaaaga 94810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1881 - 1922
Target Start/End: Complemental strand, 95092 - 95051
Alignment:
Q  1881 ttttgctagaagacaccctttatgaaggtgtcttttagcaag 1922  Q
    ||||||||||||||||| |||| ||| |||||||||||||||    
T  95092 ttttgctagaagacaccttttaagaatgtgtcttttagcaag 95051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1885 - 1926
Target Start/End: Original strand, 478315 - 478356
Alignment:
Q  1885 gctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||  ||||||||||||| ||||||||||||||    
T  478315 gctagaagacactttttatgaaggtgttttttagcaagttat 478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 9232 - 9306
Alignment:
Q  1899 tttatgaaggtgtcttttagcaag-ttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||||||| ||||||||||||||||| ||||||    
T  9232 tttatgaaggtgtcttttagcaaaattataactaaaaagtgga-aatcacaccttgaggtgtggattgcgaaaaga 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1883 - 1926
Target Start/End: Original strand, 9155 - 9198
Alignment:
Q  1883 ttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  9155 ttgctagaagacaccttttatgaaggtgtattttagcaagttat 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1880 - 1926
Target Start/End: Original strand, 392406 - 392452
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  392406 gttttgctagaagacaccttttatgaagatgtcttttagcaagttat 392452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1900 - 1973
Target Start/End: Original strand, 392488 - 392561
Alignment:
Q  1900 ttatgaaggtgtcttttagcaagt-tataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    |||||||||||||||||||||| | |||||||||||||| || ||||||| ||| |||||||| |||||||||||    
T  392488 ttatgaaggtgtcttttagcaaatgtataactaaaaagtgga-aatcacaccttaaggtgtgggttgctaaaaga 392561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 1880 - 1971
Target Start/End: Original strand, 74985 - 75076
Alignment:
Q  1880 gttttgctagaagacaccctttatgaaggtgtcttttag-caagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    ||||||||||||||| |  ||||| ||||||||||||||  |||||||||||||||||| || ||||||| |||| ||| ||| |||||||||    
T  74985 gttttgctagaagacgctttttattaaggtgtcttttagtaaagttataactaaaaagtgga-aatcacaccttggggtatgggttgctaaaa 75076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1899 - 1973
Target Start/End: Original strand, 17867 - 17941
Alignment:
Q  1899 tttatgaaggtgtcttttagc-aagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaaga 1973  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||||| ||||||| |||  |||||||||||    
T  17867 tttatgaaggtgttttttagcaaagttataactaaaaagtgga-aatcacaccttgaggcgtgagttgctaaaaga 17941  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1877 - 1926
Target Start/End: Original strand, 49818 - 49867
Alignment:
Q  1877 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||| |||| |||||||| || ||||||||||||||||    
T  49818 tgagttttgctagaagccaccttttatgaatgtatcttttagcaagttat 49867  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1882 - 1926
Target Start/End: Original strand, 77027 - 77071
Alignment:
Q  1882 tttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  77027 tttgctagaagacactatttatgaaggtgttttttagcaagttat 77071  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1904 - 1971
Target Start/End: Original strand, 9860 - 9927
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaa 1971  Q
    |||||||| ||||||||||||||||||||||||| | |||  ||| ||| |||||| | |||||||||    
T  9860 gaaggtgtgttttagcaagttataactaaaaagtagttaaatacaccttaaggtgtagcttgctaaaa 9927  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 1867 - 1926
Target Start/End: Complemental strand, 231297 - 231239
Alignment:
Q  1867 tatatatatgtgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 1926  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  231297 tatatatatatg-gttttgctagaagacacattttatgaaggtgtcttttaacaaattat 231239  T

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Target: scaffold0325 (Bit Score: 30; Significance: 0.0000008; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1904 - 1937
Target Start/End: Complemental strand, 6608 - 6575
Alignment:
Q  1904 gaaggtgtcttttagcaagttataactaaaaagt 1937  Q
    |||||||| |||||||||||||||||||||||||    
T  6608 gaaggtgtattttagcaagttataactaaaaagt 6575  T

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