View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3065_low_37 (Length: 236)
Name: NF3065_low_37
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3065_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 23 - 210
Target Start/End: Original strand, 42701560 - 42701747
Alignment:
| Q |
23 |
gtcaacatgagcgtggaaaaaatattgagaagcaaaagacagaaagactaacgttaaaaaatttgaaacttgtgactcgtgagctgtgagacatagcagc |
122 |
Q |
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| T |
42701560 |
gtcaacatgagcgtggaaaaaatattgagaaccaaaagacagaaagactaacgttaaaaaatttgaaacttgtgactcgtgagctgtgagacatagcagc |
42701659 |
T |
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| Q |
123 |
agcacacaacactgatattgtcacataaacattagtagtgattttaaaaggaaaaaagtgataggttataaccagcaagtgtttgtgt |
210 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42701660 |
agcacacaacactgatattggcacataaacattagtagtgattttaaaaggaaaaaagtgataggttataaccagcaagtgtttgtgt |
42701747 |
T |
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