View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3065_low_39 (Length: 234)
Name: NF3065_low_39
Description: NF3065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3065_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33300050 - 33300270
Alignment:
| Q |
1 |
cttttatgtggcatgtcattcaattggaaggtctgccatggataaagcaccagatgtgaaattcaatgccattcaagttgtttgttcatcaagttatttc |
100 |
Q |
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| T |
33300050 |
cttttatgtggcatgtcattcaattggaaggtctgccatggataaagcaccagatgtgaaattcaatgccattcaagttgtttgttcatcaagttatttc |
33300149 |
T |
|
| Q |
101 |
ttaagtggttatattgctcataaggatgcatgcctaccacaaatttggcctagaaatgaaaatccacccaaccttgtttcatcaaataggtaccatttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33300150 |
ttaagtggttatattgctcataaggatgcatgcctaccacaaatttggcctagaaatgaaaatccacccaaccttgtttcatcaaataggtaccatttct |
33300249 |
T |
|
| Q |
201 |
tcctctttctaggtactttat |
221 |
Q |
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|||||||||||||||| |||| |
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| T |
33300250 |
tcctctttctaggtacattat |
33300270 |
T |
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