View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3068_high_8 (Length: 238)
Name: NF3068_high_8
Description: NF3068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3068_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 19095194 - 19095404
Alignment:
| Q |
17 |
aaaacaactatatgacaaactattatctaatctccatagttgaactttttccttgtctttaagcaacgaacttgtaaaatagaattctacaacaaaataa |
116 |
Q |
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| T |
19095194 |
aaaacaactatatgacaaactatcatctaagctccatagttgaaatttttccttgtctttaagcaacgaacttgtaaaatagaattctacaacaaaataa |
19095293 |
T |
|
| Q |
117 |
caagtctcactgaaatataagaacaataaaaattctttacctgatctggtaatggatcatcgacatttgatgcattcttttacttaaagactctgattct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
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| T |
19095294 |
caagtctcactgaaatataagaacaataaaaattctttacctgatctggtaatggaccaccgacatttgatgcattcttttacttaaagactctgattct |
19095393 |
T |
|
| Q |
217 |
ccagacttcat |
227 |
Q |
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||||||||||| |
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| T |
19095394 |
ccagacttcat |
19095404 |
T |
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