View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3069_high_53 (Length: 306)
Name: NF3069_high_53
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3069_high_53 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 1505025 - 1505289
Alignment:
| Q |
21 |
gaatttagctactcatactcattgtagctttacaaacaggatgcaaggaagattagtttgcatcaaatgaagatgattcaatcttgaagaaccccgatat |
120 |
Q |
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| T |
1505025 |
gaatttagctactcatactcattgtagctttacaaacaggatgcaagaaagattagtttgcatcaaatgaagatgattcaatcttgaagaaccccgatat |
1505124 |
T |
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| Q |
121 |
cattcaagaatgagttctacttcctttttaacataaaatcaaaggagatgtcaaagtacctaaattcttaataaaacctggatattcaatatttacggta |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
1505125 |
cattcaagaatgagttctacttcctttttaacataaaatcaaaggagatgtcaaagtacctaaattcttaataaaacctggatattctatatttacggta |
1505224 |
T |
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| Q |
221 |
aattggggggaatttcctatgttttctatccaatgcaagttaataagtcccttctaattatattg |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1505225 |
aattggggggaatttcctatgttttctatccaatgcaagttaataagtcccttctaattatattg |
1505289 |
T |
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