View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3069_high_70 (Length: 259)
Name: NF3069_high_70
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3069_high_70 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 41918437 - 41918668
Alignment:
| Q |
13 |
aaaatcattacagagaatgtgttatttcaggtgatgttaaatatttcaacacctttattttatatttttt-ctgaatacatctattttgtttggtttctt |
111 |
Q |
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| T |
41918437 |
aaaatcattacagagaatgtgttatttcaggtgatgttaaatatttcaacacctttattttatatttttttcttaatacatctattttgtttggtttctt |
41918536 |
T |
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| Q |
112 |
atgttccatgttggaaaaagggttgaaatggcatattcgtaaacctataaaatatatattttgcggacagcctgtcacgaaaagttgtgaacgaaactga |
211 |
Q |
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| T |
41918537 |
atgttccatgttggaaaaagggttgaaatggcatattcgtaaacctataaaatatatattttgcggacagcctgtcacgaaaagttgtgaacgaaactga |
41918636 |
T |
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| Q |
212 |
tgatagatgactaaccatgaggcccatgatat |
243 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
41918637 |
tgatagatgactaaccatgaggcccatgatat |
41918668 |
T |
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