View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3069_high_79 (Length: 249)
Name: NF3069_high_79
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3069_high_79 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 32261261 - 32261502
Alignment:
| Q |
1 |
tggttacaactgcaatcatcatacccctcattaaattgttatacaagcatcgtcctcgagtcttaagttcatcaagcatatttgatgaagaaatgagaac |
100 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32261261 |
tggttacaactgcaatcatcacacccctcattaaattgttatacaagcatcgtcctcgagtattaagttcatcaagcatatttgatgaagaaatgagaac |
32261360 |
T |
|
| Q |
101 |
aatccaaaacactccaagaaattcagagtttcgcattgttacttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32261361 |
aatccaaaacactccaagaaattcagagtttcgcattgttacttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaac |
32261460 |
T |
|
| Q |
201 |
ccaattcaagaaagtcccttatgtgtctttgtgattcatctc |
242 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32261461 |
ccaattcaagaaagtcccttatgtgtctttgtgattcatctc |
32261502 |
T |
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