View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3069_high_83 (Length: 246)

Name: NF3069_high_83
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3069_high_83
NF3069_high_83
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-118)||(9502-9619)
[»] chr6 (32 HSPs)
chr6 (1-118)||(15364731-15364848)
chr6 (1-118)||(15328561-15328678)
chr6 (9-114)||(25924750-25924855)
chr6 (8-114)||(34413170-34413276)
chr6 (1-114)||(32784810-32784923)
chr6 (1-109)||(28965731-28965839)
chr6 (22-113)||(2881426-2881517)
chr6 (2-112)||(237286-237396)
chr6 (2-103)||(6435109-6435210)
chr6 (2-109)||(3660244-3660351)
chr6 (14-111)||(3339388-3339485)
chr6 (22-110)||(2862165-2862253)
chr6 (22-117)||(1803962-1804057)
chr6 (22-104)||(27334957-27335039)
chr6 (22-104)||(27395697-27395779)
chr6 (2-116)||(2056856-2056970)
chr6 (2-104)||(12441600-12441702)
chr6 (8-113)||(11017461-11017566)
chr6 (2-111)||(17902581-17902690)
chr6 (14-94)||(17835697-17835777)
chr6 (19-115)||(21210346-21210442)
chr6 (8-51)||(2886694-2886737)
chr6 (8-118)||(9954627-9954737)
chr6 (19-97)||(11635707-11635783)
chr6 (1-68)||(26668568-26668635)
chr6 (19-109)||(29376607-29376697)
chr6 (58-111)||(31368501-31368557)
chr6 (19-104)||(1688269-1688354)
chr6 (63-104)||(2689086-2689127)
chr6 (19-91)||(4923036-4923108)
chr6 (8-56)||(16533204-16533252)
chr6 (14-78)||(24437529-24437592)
[»] chr4 (79 HSPs)
chr4 (113-190)||(11645873-11645950)
chr4 (1-112)||(4550406-4550517)
chr4 (1-114)||(51224724-51224837)
chr4 (2-114)||(56025329-56025441)
chr4 (2-113)||(8026651-8026762)
chr4 (2-104)||(55642501-55642603)
chr4 (2-115)||(5208212-5208325)
chr4 (2-112)||(1796438-1796547)
chr4 (1-112)||(24019859-24019972)
chr4 (2-112)||(27001297-27001407)
chr4 (19-112)||(9032870-9032963)
chr4 (2-114)||(37022334-37022446)
chr4 (2-114)||(44368088-44368200)
chr4 (2-114)||(51377179-51377291)
chr4 (2-112)||(24235393-24235503)
chr4 (2-112)||(31221486-31221596)
chr4 (2-96)||(46844145-46844239)
chr4 (2-112)||(47105984-47106094)
chr4 (19-104)||(32901419-32901504)
chr4 (19-96)||(36728526-36728603)
chr4 (2-114)||(7037370-7037482)
chr4 (8-104)||(41495092-41495188)
chr4 (23-115)||(53384227-53384318)
chr4 (8-115)||(3223068-3223175)
chr4 (19-104)||(15638220-15638305)
chr4 (1-115)||(43434412-43434514)
chr4 (20-104)||(20632544-20632628)
chr4 (1-113)||(45548671-45548783)
chr4 (8-112)||(49424708-49424812)
chr4 (8-68)||(54165091-54165151)
chr4 (14-65)||(29406972-29407023)
chr4 (74-117)||(45779186-45779229)
chr4 (2-113)||(55267888-55267999)
chr4 (19-104)||(610896-610982)
chr4 (21-115)||(4971898-4971992)
chr4 (2-68)||(5466427-5466493)
chr4 (2-116)||(42177934-42178048)
chr4 (22-112)||(53662330-53662420)
chr4 (19-104)||(2193705-2193790)
chr4 (8-113)||(19910889-19910994)
chr4 (19-104)||(32365563-32365648)
chr4 (19-116)||(36512932-36513028)
chr4 (2-111)||(52669498-52669607)
chr4 (74-114)||(31049021-31049061)
chr4 (21-73)||(35580202-35580254)
chr4 (8-64)||(40721900-40721956)
chr4 (24-68)||(45176665-45176709)
chr4 (1-68)||(31048960-31049027)
chr4 (19-82)||(43358703-43358766)
chr4 (19-66)||(45923469-45923515)
chr4 (8-82)||(9162145-9162219)
chr4 (19-113)||(33483993-33484087)
chr4 (19-113)||(47519607-47519701)
chr4 (79-113)||(54165058-54165092)
chr4 (75-108)||(439294-439327)
chr4 (19-68)||(1562468-1562517)
chr4 (67-112)||(12694316-12694361)
chr4 (24-113)||(13182426-13182515)
chr4 (19-104)||(13267375-13267459)
chr4 (19-104)||(18568711-18568796)
chr4 (19-104)||(20056472-20056557)
chr4 (19-68)||(20956514-20956563)
chr4 (21-113)||(24154704-24154794)
chr4 (19-68)||(36812335-36812384)
chr4 (8-61)||(39844197-39844250)
chr4 (19-68)||(39880962-39881011)
chr4 (80-113)||(45923517-45923550)
chr4 (19-68)||(48743800-48743849)
chr4 (8-104)||(8681020-8681116)
chr4 (8-68)||(12241137-12241196)
chr4 (8-72)||(19245967-19246031)
chr4 (24-112)||(30866445-30866533)
chr4 (14-82)||(31413704-31413772)
chr4 (8-68)||(33820269-33820328)
chr4 (14-78)||(36792417-36792481)
chr4 (14-82)||(38952774-38952842)
chr4 (8-68)||(40756000-40756060)
chr4 (20-68)||(41119458-41119506)
chr4 (7-51)||(46173615-46173659)
[»] chr3 (55 HSPs)
chr3 (1-112)||(40478175-40478286)
chr3 (1-112)||(41877760-41877871)
chr3 (1-115)||(45295624-45295738)
chr3 (1-104)||(25542867-25542970)
chr3 (1-116)||(31007233-31007351)
chr3 (1-111)||(42718193-42718301)
chr3 (2-112)||(35756053-35756163)
chr3 (2-112)||(52453980-52454090)
chr3 (2-115)||(34021348-34021461)
chr3 (2-118)||(11327181-11327297)
chr3 (2-113)||(13159734-13159845)
chr3 (19-114)||(43900862-43900957)
chr3 (1-83)||(25142700-25142782)
chr3 (2-116)||(50279971-50280085)
chr3 (2-116)||(50879668-50879782)
chr3 (2-115)||(30400041-30400154)
chr3 (41-113)||(14992187-14992259)
chr3 (2-114)||(28263618-28263730)
chr3 (19-104)||(54233397-54233482)
chr3 (2-114)||(36819029-36819141)
chr3 (2-113)||(8254100-8254211)
chr3 (19-105)||(2009744-2009829)
chr3 (2-116)||(23163029-23163143)
chr3 (19-104)||(23906883-23906968)
chr3 (19-104)||(51717531-51717616)
chr3 (8-116)||(53102786-53102894)
chr3 (2-109)||(20714316-20714423)
chr3 (2-113)||(46344487-46344598)
chr3 (2-112)||(3957906-3958016)
chr3 (19-104)||(43441760-43441845)
chr3 (14-111)||(44855336-44855433)
chr3 (2-113)||(3069462-3069573)
chr3 (60-111)||(7039123-7039174)
chr3 (19-78)||(32687882-32687941)
chr3 (22-109)||(32931809-32931896)
chr3 (2-61)||(37303013-37303072)
chr3 (2-104)||(47056421-47056524)
chr3 (19-82)||(47484369-47484432)
chr3 (1-104)||(50652460-50652563)
chr3 (19-73)||(3483209-3483263)
chr3 (14-68)||(7949873-7949927)
chr3 (19-104)||(9027963-9028047)
chr3 (8-61)||(26279963-26280016)
chr3 (8-109)||(27162358-27162459)
chr3 (8-61)||(32457694-32457747)
chr3 (17-114)||(38957402-38957499)
chr3 (8-104)||(1208025-1208120)
chr3 (19-51)||(1765483-1765515)
chr3 (8-116)||(11173529-11173636)
chr3 (63-103)||(20080082-20080122)
chr3 (33-113)||(23183606-23183686)
chr3 (8-83)||(33007439-33007515)
chr3 (70-114)||(42864202-42864246)
chr3 (8-104)||(49130933-49131028)
chr3 (36-72)||(52678521-52678557)
[»] chr8 (59 HSPs)
chr8 (17-115)||(11089664-11089763)
chr8 (8-116)||(43587720-43587828)
chr8 (19-112)||(38504260-38504353)
chr8 (1-112)||(34972139-34972248)
chr8 (8-112)||(43602311-43602415)
chr8 (2-109)||(23952567-23952673)
chr8 (2-116)||(1065490-1065604)
chr8 (2-112)||(30927819-30927929)
chr8 (2-116)||(41273588-41273702)
chr8 (19-112)||(6105323-6105416)
chr8 (8-116)||(6825161-6825269)
chr8 (2-109)||(41293613-41293719)
chr8 (2-112)||(39258943-39259053)
chr8 (19-104)||(11138986-11139071)
chr8 (20-104)||(30129500-30129584)
chr8 (2-113)||(19723093-19723204)
chr8 (14-104)||(2597056-2597146)
chr8 (19-109)||(33817247-33817337)
chr8 (19-104)||(5925145-5925230)
chr8 (22-115)||(14228786-14228879)
chr8 (8-104)||(37562037-37562133)
chr8 (1-68)||(29509338-29509405)
chr8 (2-60)||(6849408-6849466)
chr8 (8-78)||(11879412-11879482)
chr8 (8-78)||(11896828-11896898)
chr8 (2-104)||(36064103-36064205)
chr8 (2-104)||(36497734-36497836)
chr8 (19-104)||(43186386-43186469)
chr8 (19-104)||(5924900-5924985)
chr8 (63-116)||(12783762-12783815)
chr8 (19-104)||(34765746-34765831)
chr8 (8-113)||(36593673-36593778)
chr8 (8-73)||(37033029-37033093)
chr8 (19-72)||(39153612-39153665)
chr8 (19-112)||(40211635-40211728)
chr8 (2-78)||(30925577-30925652)
chr8 (8-68)||(40719576-40719636)
chr8 (2-116)||(6745926-6746041)
chr8 (22-80)||(41519951-41520010)
chr8 (9-72)||(44086440-44086503)
chr8 (2-112)||(6656227-6656337)
chr8 (2-112)||(6736629-6736739)
chr8 (14-104)||(7129618-7129707)
chr8 (3-104)||(8888326-8888428)
chr8 (2-112)||(20288606-20288716)
chr8 (2-112)||(21075235-21075345)
chr8 (8-82)||(22836057-22836131)
chr8 (8-116)||(34474028-34474137)
chr8 (19-109)||(35595300-35595390)
chr8 (64-113)||(9208065-9208114)
chr8 (35-116)||(13565402-13565483)
chr8 (75-116)||(27630893-27630934)
chr8 (8-61)||(28473484-28473537)
chr8 (19-68)||(30608642-30608691)
chr8 (24-113)||(34970300-34970389)
chr8 (2-51)||(39027557-39027606)
chr8 (7-83)||(22767208-22767284)
chr8 (22-114)||(37568498-37568590)
chr8 (8-56)||(40102102-40102150)
[»] chr5 (42 HSPs)
chr5 (14-112)||(7077227-7077325)
chr5 (2-116)||(30574261-30574375)
chr5 (1-115)||(36548265-36548379)
chr5 (14-114)||(19271944-19272044)
chr5 (2-117)||(12512866-12512981)
chr5 (1-112)||(26685763-26685874)
chr5 (1-112)||(26955494-26955605)
chr5 (2-109)||(32634781-32634888)
chr5 (2-112)||(3263396-3263506)
chr5 (2-112)||(15622117-15622227)
chr5 (2-116)||(38010945-38011059)
chr5 (2-115)||(11464008-11464121)
chr5 (19-114)||(30776709-30776804)
chr5 (19-113)||(4292873-4292967)
chr5 (2-115)||(3154528-3154641)
chr5 (19-104)||(8959250-8959335)
chr5 (2-118)||(9594551-9594667)
chr5 (2-114)||(12417699-12417811)
chr5 (19-115)||(35972662-35972756)
chr5 (2-109)||(33823585-33823692)
chr5 (2-112)||(9596702-9596812)
chr5 (19-104)||(17489438-17489523)
chr5 (24-68)||(31006152-31006196)
chr5 (2-89)||(28501690-28501777)
chr5 (2-112)||(4954539-4954649)
chr5 (2-112)||(10522848-10522958)
chr5 (14-68)||(41192672-41192726)
chr5 (2-115)||(22920377-22920490)
chr5 (8-80)||(34381091-34381163)
chr5 (19-102)||(12401282-12401365)
chr5 (8-78)||(10232578-10232648)
chr5 (8-78)||(12661869-12661939)
chr5 (2-112)||(25345411-25345521)
chr5 (79-117)||(34888846-34888884)
chr5 (19-104)||(372616-372701)
chr5 (19-104)||(14914460-14914544)
chr5 (19-104)||(20719912-20719996)
chr5 (79-112)||(31006195-31006228)
chr5 (19-68)||(32873081-32873130)
chr5 (8-72)||(25038159-25038223)
chr5 (8-68)||(36415994-36416054)
chr5 (8-104)||(39595353-39595448)
[»] chr2 (53 HSPs)
chr2 (2-112)||(30413620-30413730)
chr2 (1-116)||(43936345-43936458)
chr2 (8-113)||(33003902-33004007)
chr2 (2-113)||(10550346-10550457)
chr2 (1-111)||(12175217-12175327)
chr2 (17-114)||(36582344-36582441)
chr2 (2-109)||(37966429-37966536)
chr2 (2-112)||(44484544-44484654)
chr2 (8-113)||(38021435-38021539)
chr2 (2-114)||(3195973-3196085)
chr2 (1-113)||(33029989-33030101)
chr2 (19-104)||(5962728-5962813)
chr2 (8-96)||(30973895-30973983)
chr2 (2-109)||(22353066-22353173)
chr2 (1-72)||(27540087-27540158)
chr2 (14-112)||(23047971-23048069)
chr2 (2-116)||(29871239-29871353)
chr2 (2-114)||(6884983-6885095)
chr2 (8-104)||(12192026-12192122)
chr2 (19-106)||(9694955-9695042)
chr2 (2-115)||(30192236-30192349)
chr2 (19-104)||(36909740-36909824)
chr2 (53-113)||(4097068-4097128)
chr2 (8-78)||(34138959-34139030)
chr2 (2-113)||(38246638-38246749)
chr2 (8-114)||(23391141-23391247)
chr2 (19-104)||(26809579-26809665)
chr2 (2-112)||(29893683-29893793)
chr2 (2-100)||(36383535-36383633)
chr2 (19-104)||(12358403-12358488)
chr2 (19-68)||(13466007-13466056)
chr2 (8-77)||(14954522-14954591)
chr2 (19-112)||(33857307-33857400)
chr2 (22-114)||(27307131-27307223)
chr2 (8-115)||(28165208-28165315)
chr2 (2-112)||(3298993-3299103)
chr2 (2-56)||(6639416-6639470)
chr2 (74-112)||(6851559-6851597)
chr2 (8-74)||(19913863-19913929)
chr2 (8-78)||(26321620-26321689)
chr2 (13-71)||(34101073-34101131)
chr2 (19-65)||(39133812-39133858)
chr2 (2-68)||(39744526-39744592)
chr2 (65-114)||(4061983-4062032)
chr2 (19-68)||(6851591-6851640)
chr2 (14-83)||(13104564-13104633)
chr2 (8-61)||(23880174-23880227)
chr2 (14-83)||(32750083-32750152)
chr2 (19-80)||(41353417-41353478)
chr2 (8-56)||(16051332-16051380)
chr2 (82-114)||(27540156-27540188)
chr2 (8-68)||(31635742-31635802)
chr2 (8-104)||(38572018-38572114)
[»] scaffold0115 (1 HSPs)
scaffold0115 (8-111)||(35382-35485)
[»] chr7 (45 HSPs)
chr7 (1-120)||(33881585-33881704)
chr7 (24-112)||(17157228-17157316)
chr7 (22-113)||(29609764-29609856)
chr7 (8-112)||(26041389-26041493)
chr7 (2-112)||(27164725-27164835)
chr7 (2-112)||(30864305-30864415)
chr7 (19-104)||(10014851-10014936)
chr7 (19-104)||(25614717-25614802)
chr7 (19-104)||(42060747-42060832)
chr7 (8-112)||(39369381-39369485)
chr7 (2-112)||(5900959-5901069)
chr7 (2-112)||(33050256-33050366)
chr7 (2-116)||(38978565-38978678)
chr7 (2-104)||(42431796-42431898)
chr7 (8-114)||(44511218-44511324)
chr7 (2-112)||(116704-116814)
chr7 (23-112)||(30402081-30402168)
chr7 (11-104)||(42476464-42476557)
chr7 (8-56)||(2469771-2469819)
chr7 (22-112)||(23330002-23330090)
chr7 (2-113)||(29162166-29162277)
chr7 (23-113)||(20406635-20406725)
chr7 (22-111)||(3344955-3345044)
chr7 (19-104)||(8742473-8742558)
chr7 (43-112)||(16645554-16645623)
chr7 (43-112)||(17619915-17619984)
chr7 (2-114)||(19880117-19880229)
chr7 (19-104)||(37385129-37385214)
chr7 (19-72)||(42640933-42640986)
chr7 (19-104)||(47530187-47530272)
chr7 (19-115)||(25332385-25332480)
chr7 (2-112)||(2346947-2347057)
chr7 (8-78)||(19426659-19426728)
chr7 (8-82)||(22331129-22331203)
chr7 (2-116)||(43255451-43255565)
chr7 (8-78)||(47424908-47424977)
chr7 (19-68)||(21037168-21037217)
chr7 (19-68)||(21153142-21153191)
chr7 (8-61)||(30862715-30862768)
chr7 (8-61)||(30982293-30982346)
chr7 (8-61)||(36990120-36990173)
chr7 (19-104)||(44894371-44894455)
chr7 (8-56)||(34348971-34349019)
chr7 (19-91)||(37325728-37325800)
chr7 (2-114)||(37392116-37392228)
[»] chr1 (45 HSPs)
chr1 (1-115)||(49189096-49189210)
chr1 (2-114)||(10385487-10385599)
chr1 (8-112)||(43195977-43196081)
chr1 (2-113)||(5383832-5383943)
chr1 (1-113)||(37669470-37669582)
chr1 (2-115)||(6829670-6829783)
chr1 (19-116)||(19920852-19920949)
chr1 (1-77)||(2257617-2257693)
chr1 (2-114)||(13813631-13813743)
chr1 (2-113)||(27578255-27578366)
chr1 (2-112)||(50035426-50035536)
chr1 (2-115)||(3291310-3291423)
chr1 (2-103)||(36669267-36669368)
chr1 (19-104)||(42843240-42843325)
chr1 (8-104)||(50777319-50777415)
chr1 (2-113)||(7371835-7371946)
chr1 (2-104)||(9011718-9011820)
chr1 (2-112)||(26501368-26501478)
chr1 (1-87)||(39669878-39669964)
chr1 (2-104)||(50797853-50797955)
chr1 (19-72)||(10302271-10302324)
chr1 (2-114)||(25130776-25130888)
chr1 (8-112)||(27895649-27895752)
chr1 (2-114)||(25995533-25995647)
chr1 (2-68)||(29362624-29362690)
chr1 (2-116)||(29489243-29489357)
chr1 (19-72)||(8670162-8670215)
chr1 (19-104)||(51193029-51193114)
chr1 (73-113)||(24749629-24749669)
chr1 (74-114)||(27563617-27563657)
chr1 (8-68)||(42615936-42615996)
chr1 (5-104)||(7078396-7078495)
chr1 (8-78)||(15061924-15061994)
chr1 (35-104)||(46902708-46902778)
chr1 (20-73)||(366748-366801)
chr1 (10-71)||(4618725-4618786)
chr1 (8-116)||(22389411-22389517)
chr1 (2-51)||(26585122-26585171)
chr1 (79-116)||(51704683-51704720)
chr1 (36-72)||(3606024-3606060)
chr1 (2-70)||(8905801-8905869)
chr1 (7-83)||(25302562-25302638)
chr1 (8-112)||(35043608-35043712)
chr1 (8-104)||(40610308-40610403)
chr1 (8-104)||(43457716-43457811)
[»] scaffold0172 (1 HSPs)
scaffold0172 (19-112)||(17065-17158)
[»] scaffold0514 (1 HSPs)
scaffold0514 (8-113)||(1383-1488)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-113)||(147143-147254)
[»] scaffold0085 (1 HSPs)
scaffold0085 (2-112)||(31188-31298)
[»] scaffold0522 (1 HSPs)
scaffold0522 (8-112)||(2392-2496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-114)||(249028-249123)
[»] scaffold0121 (1 HSPs)
scaffold0121 (19-115)||(29873-29969)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-112)||(18674-18777)
[»] scaffold0193 (1 HSPs)
scaffold0193 (19-113)||(24763-24857)
[»] scaffold0054 (1 HSPs)
scaffold0054 (8-82)||(31518-31592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-104)||(5152-5254)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-115)||(88893-88994)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-68)||(2158-2225)
[»] scaffold0049 (1 HSPs)
scaffold0049 (19-104)||(72067-72152)
[»] scaffold0618 (1 HSPs)
scaffold0618 (2-113)||(3433-3545)


Alignment Details
Target: scaffold0576 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9502 - 9619
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9502 attatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaa 9601  T
Q  101 atattattgctcttttca 118  Q
    |||| ||||||| |||||    
T  9602 atatcattgctcatttca 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 8e-39; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15364731 - 15364848
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15364731 attatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaa 15364830  T
Q  101 atattattgctcttttca 118  Q
    |||| ||||||| |||||    
T  15364831 atatcattgctcatttca 15364848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15328561 - 15328678
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||| | |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15328561 attatcctctttcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaa 15328660  T
Q  101 atattattgctcttttca 118  Q
    |||| ||||||| |||||    
T  15328661 atatcattgctcatttca 15328678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 25924855 - 25924750
Alignment:
Q  9 ctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattatt 108  Q
    |||| |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||||| |||    
T  25924855 ctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatgaatgtacaaatatcatt 25924756  T
Q  109 gctctt 114  Q
    ||||||    
T  25924755 gctctt 25924750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 34413170 - 34413276
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||| ||||| ||||| ||||||||||| |||  ||| ||||||| ||||||||||||||||||||| ||||||||||||| ||    
T  34413170 tctctcttcctttttctctccccattgtttttgaccaatcaaaagagaaaaaatcaaagttgtcaccaaaattgtcattaaattgatgtacaaatatcat 34413269  T
Q  108 tgctctt 114  Q
    |||||||    
T  34413270 tgctctt 34413276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32784810 - 32784923
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||||| |||||||||||||| || |||||||| |||| |||||||| || |||||||||||||||||||||  ||||| ||    
T  32784810 attatcctctctcttcctttttctttctccattatttttgactaatcaaaagagagaaaaacaaaattgtcaccaaaattgtcattaaataaatgtagaa 32784909  T
Q  101 atattattgctctt 114  Q
    |||| |||||||||    
T  32784910 atatcattgctctt 32784923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28965839 - 28965731
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||     
T  28965839 attatattctctcttcttttttctctcttcattgtttttgaccaatcaaaagagagagaaacaaagttatcaccaaagttgtcattaaatggatgtacat 28965740  T
Q  101 atattattg 109  Q
    |||| ||||    
T  28965739 atatcattg 28965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 2881426 - 2881517
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||| ||||||||| |||||| | || ||||  |||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||    
T  2881426 tctctctctattatttttgaccaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctct 2881517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 237396 - 237286
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| |||||  ||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||||||| ||||| ||||    
T  237396 ttatcgtctctcatcctttttctctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaatagatgtccaaa 237297  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  237296 tatcattgctc 237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 6435109 - 6435210
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| || | |||||||| |||||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || ||||||||||||    
T  6435109 ttatcttctctcttactttttctctatccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaa 6435208  T
Q  102 ta 103  Q
    ||    
T  6435209 ta 6435210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 3660351 - 3660244
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| |||  |||||||||| |||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  3660351 ttatcttctctcttcttttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 3660252  T
Q  102 tattattg 109  Q
    ||| ||||    
T  3660251 tatcattg 3660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 3339485 - 3339388
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 111  Q
    |||| ||||||||||| ||| ||||| |||||| |||| |||| |||||||  || |||| ||| ||||||| |||||||||||||||||| ||||||    
T  3339485 ttcctttttctctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 2862165 - 2862253
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgc 110  Q
    |||||||| ||||||||| |||||| | || ||||  ||||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  2862165 tctctctctattatttttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 1803962 - 1804057
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttttc 117  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || ||||||||||||||| | | ||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttttc 1804057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27334957 - 27335039
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27334957 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27395697 - 27395779
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27395697 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27395779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 2056856 - 2056970
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||||| |||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  |||| |||||||||    
T  2056856 ttatcctctctcttcttttttctctatccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatgaatgtacaaa 2056955  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  2056956 tatcattgctctttt 2056970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 12441600 - 12441702
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| || | ||||||||||||||| ||||| ||| || | || |||| ||| ||| ||| |||||||| ||||||| || | ||||||||||    
T  12441600 ttatcttctctcttactttttctctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaa 12441699  T
Q  102 tat 104  Q
    |||    
T  12441700 tat 12441702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 11017461 - 11017566
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||| ||  ||||||||||||||||| |     
T  11017461 tctcttttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcac 11017560  T
Q  108 tgctct 113  Q
    ||||||    
T  11017561 tgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17902690 - 17902581
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||| |||||||||| ||||| |||||| | || |||| |||||||  ||||||| ||| |||||||  ||| ||||||||||    
T  17902690 ttatcctctctcttcttttttatctctccattgtttttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatggaatagatgtacaaa 17902591  T
Q  102 tattattgct 111  Q
    ||| ||||||    
T  17902590 tatcattgct 17902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17835697 - 17835777
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggat 94  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||  ||| ||||| ||||||||||    
T  17835697 ttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtccttaaatggat 17835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 21210346 - 21210442
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| ||| | || |||||||| | |||||||| |||||| ||||||||||    
T  21210346 ttttctctctccattgtttttaatcaataagaagagagaaaaacaaggttgtcaactaagttgtcattcactggatgtataaatatcattgctcttt 21210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 2886694 - 2886737
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaa 51  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  2886694 tctctattcctttttctctctccattgttttttaccaatgaaaa 2886737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 9954627 - 9954737
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatta 106  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| || |  ||||| ||||||||| |||| ||||||||| ||| ||||||| |    
T  9954627 tctctcttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaagttgtcaccaaaagttgt-attaaatggttgttcaaatatca 9954725  T
Q  107 ttgctcttttca 118  Q
     | |||||||||    
T  9954726 ctcctcttttca 9954737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11635707 - 11635783
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 97  Q
    ||||||||||||||||||||| |||||| |||| | |  |||||| |||| ||| |||||||||| | |||||||||||    
T  11635707 ttttctctctccattatttttgaccaataaaaaaaaa--aaaacagagttgtcatcaaaattgtcttcaaatggatgta 11635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26668568 - 26668635
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  26668568 attatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 26668635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 29376697 - 29376607
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 109  Q
    |||||| |||||||| ||| | |||||| | || |||| ||||||  ||| ||| ||||||||||| ||||| ||||||||||||| ||||    
T  29376697 ttttctttctccattgtttataaccaataagaagagagcaaaacatggttgtcatcaaaattgtcactaaatagatgtacaaatatcattg 29376607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 31368557 - 31368501
Alignment:
Q  58 aaaacaaagttatcaccaaaattgtcatt---aaatggatgtacaaatattattgct 111  Q
    ||||||||||| |||||||| ||||||||   |||||||||||||||||| ||||||    
T  31368557 aaaacaaagttgtcaccaaagttgtcattcataaatggatgtacaaatatcattgct 31368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 1688354 - 1688269
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||  ||||| |||  | ||||||||  |||||| ||| |||||||    
T  1688354 ttttctctctccattgtttttaaccaataaaaagagaggaaaaagaagttgtcaagataattgtcaaaaaatggttgttcaaatat 1688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 2689086 - 2689127
Alignment:
Q  63 aaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  2689086 aaagttgtcacaaaaattgtcattaaatggatgttcaaatat 2689127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 4923036 - 4923108
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 91  Q
    ||||||||||| ||||||||| |||||| | || |||| |||||||| ||||||  ||| ||||||| |||||    
T  4923036 ttttctctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgtcatcaaatg 4923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 16533252 - 16533204
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  16533252 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 16533204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 24437529 - 24437592
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||| |||||    
T  24437529 ttcctttttctctctccattgtttttaaccaataaaaaaagaggaaaa-aaagttgtcatcaaaa 24437592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 11645873 - 11645950
Alignment:
Q  113 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645873 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 11645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4550406 - 4550517
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||| ||    
T  4550406 attatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtataa 4550505  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  4550506 atatcattgctc 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 51224837 - 51224724
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| || | |||||||||| |||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||    
T  51224837 attatcctctctctttctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaa 51224738  T
Q  101 atattattgctctt 114  Q
    |||| |||||||||    
T  51224737 atatcattgctctt 51224724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 56025329 - 56025441
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| |||||||| ||||||||||||| |||||||||    
T  56025329 ttatcctctctgttcctttttctctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaatgaatgtacaaa 56025428  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  56025429 tatcattgctctt 56025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 8026762 - 8026651
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  ||||||||||||||    
T  8026762 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaa 8026663  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  8026662 tatcattgctct 8026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 55642603 - 55642501
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||| |||| |||  ||| ||| ||| |||||||| || ||||||| ||||||||||||    
T  55642603 ttatcctctctcttcctttttctctctccattattttttaccaataaaaagagataaaagcaaggttgtcaccaaagttatcattaattggatgtacaaa 55642504  T
Q  102 tat 104  Q
    |||    
T  55642503 tat 55642501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 5208325 - 5208212
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  5208325 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 5208226  T
Q  102 tattattgctcttt 115  Q
    ||| ||||||||||    
T  5208225 tatcattgctcttt 5208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 1796438 - 1796547
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||  ||||||||||||||    
T  1796438 ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaag-tgtcactaaagttgtcatggaatggatgtacaaa 1796536  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  1796537 tatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 24019972 - 24019859
Alignment:
Q  1 attatcttctctattcccttttctc--tctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtac 98  Q
    |||||| ||||| |||| |||||||  |||||| | ||||| ||||||||||| ||||  |||||| ||| |||||||| |||||||||||| |||||||    
T  24019972 attatcctctctcttcctttttctctctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgtac 24019873  T
Q  99 aaatattattgctc 112  Q
    |||||| |||||||    
T  24019872 aaatatcattgctc 24019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 27001407 - 27001297
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  27001407 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 27001308  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  27001307 tatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 9032870 - 9032963
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| || |||||||||||||||||| |||||||    
T  9032870 ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 37022334 - 37022446
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||| |||||||||| ||||| |||||| |||| | || |||||||  ||||||| ||| ||||||| |||||||||||||||    
T  37022334 ttatcatctctcttcctttttatctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatggatgtacaaa 37022433  T
Q  102 tattattgctctt 114  Q
    ||| || ||||||    
T  37022434 tatcatcgctctt 37022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 44368200 - 44368088
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||| || ||| |||| ||| ||||||| |||||||||||||||    
T  44368200 ttatcatctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaa 44368101  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  44368100 tatcattgctctt 44368088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 51377291 - 51377179
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||   ||||||||||||||    
T  51377291 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaa 51377192  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  51377191 tatcattgctctt 51377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24235393 - 24235503
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||  ||| || |||| ||| ||||||| |||||||||||||||    
T  24235393 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaa 24235492  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  24235493 tatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 31221486 - 31221596
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| |||||||||||  ||| ||||||||||    
T  31221486 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaa 31221585  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  31221586 tatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 46844239 - 46844145
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 96  Q
    |||| |||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||||||| |||||||| ||||| |||||| |||||    
T  46844239 ttattttctctcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgt 46844145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 47105984 - 47106094
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  47105984 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 47106083  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  47106084 tatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 32901419 - 32901504
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || ||||||||||| |||| || |||||||||||||||    
T  32901419 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatat 32901504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 36728603 - 36728526
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 96  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||||||| |||||||| ||||||| || |||||||    
T  36728603 ttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatcaattggatgt 36728526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 7037482 - 7037370
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||||||| ||| || | ||| |||||||  ||| ||||||||||    
T  7037482 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaa 7037383  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  7037382 tataattgctctt 7037370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 41495092 - 41495188
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||||||||||| |||| || | ||| |||||||||    
T  41495092 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaaattatcatcaattagatatacaaatat 41495188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 53384318 - 53384227
Alignment:
Q  23 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||| ||||| |||||| | || |||| |||||||| || |||| ||| || |||| |||||||||||||||||||||||||||||    
T  53384318 ctctctccattgtttttgaccaataagaagagagaaaaacaaa-ttgtcactaaagttatcataaaatggatgtacaaatattattgctcttt 53384227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 3223068 - 3223175
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| || ||||  ||||||||||||||||| ||    
T  3223068 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcat 3223167  T
Q  108 tgctcttt 115  Q
    ||||||||    
T  3223168 tgctcttt 3223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 15638220 - 15638305
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| |||||  ||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  15638220 ttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 15638305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43434412 - 43434514
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| |||||| |||| |||||||| |||||| ||||| ||||||||||| | ||||||||||||            ||||||||||||||||||||||    
T  43434412 attattttctctcttcctttttctctgtccattgtttttgaccaatcaaaagataggaaaacaaag------------ttgtcattaaatggatgtacaa 43434499  T
Q  101 atattattgctcttt 115  Q
    |||| ||||||||||    
T  43434500 atatcattgctcttt 43434514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 20632628 - 20632544
Alignment:
Q  20 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||||||| ||||| ||||||   || |||  |||| |||||| |||||||||||||||| || |||||||||||||||    
T  20632628 tttctctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatat 20632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45548783 - 45548671
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||| |||||| ||| ||||  |||||| ||||||||  ||||||| ||  |||| ||| ||||||||| || |||||||||    
T  45548783 attatcctctctcttcctttttgtctctctattgttttcaaccaataaaaatagaaaaaaacaaggtcgtcactaaagttgtcattagatagatgtacaa 45548684  T
Q  101 atattattgctct 113  Q
    |||| ||||||||    
T  45548683 atatcattgctct 45548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 49424812 - 49424708
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||  |||| ||||||| ||||  |||||| ||    
T  49424812 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagctgtccttaaatgaatgtcaaaatatcat 49424713  T
Q  108 tgctc 112  Q
    |||||    
T  49424712 tgctc 49424708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 54165151 - 54165091
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| |||||||||| |||| ||||| ||||||||||| ||||||||||||||||    
T  54165151 tctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagtt 54165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 29407023 - 29406972
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 65  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  29407023 ttcctttttctctctctattattttttaccaatcaaaatagagaaaaccaaa 29406972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 45779229 - 45779186
Alignment:
Q  74 caaaattgtcattaaatggatgtacaaatattattgctcttttc 117  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  45779229 caaaattgtcattaaatagatgtacaaatatcattgctcttttc 45779186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 55267999 - 55267888
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||||||||||||  |||| |||||| | || |||| ||||||| |||||||| ||| |||| ||  ||| | ||||||||    
T  55267999 ttatcctctctcttcctttttctctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatggaataggtgtacaaa 55267900  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  55267899 tatcattgctct 55267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 610896 - 610982
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||||||||||||||||||||| |||| |||  ||||  ||| || |||||||| ||||||||| ||| || |||||||||    
T  610896 ttttctctctccattattttttaccaataaaaagagaaaaaaaataagattgtcaccaaagttgtcattagatgaatatacaaatat 610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 4971992 - 4971898
Alignment:
Q  21 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    |||||| | |||| ||||| ||||||||||| |  | |||||||||||||||  |||||| |||||||||  || ||||||||| ||||||||||    
T  4971992 ttctcttttcattgtttttgaccaatcaaaaaaatgaaaaacaaagttatcattaaaattatcattaaatacatatacaaatatcattgctcttt 4971898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 5466493 - 5466427
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||| ||||||||||| ||||||||||| ||||||||| ||||||  ||||||| ||||| ||||||    
T  5466493 ttattttctctattcctttttctctctctattatttttaaccaatagaaatagaagaaaataaagtt 5466427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 42178048 - 42177934
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    |||| |||||| |||| |||||| |||| ||||||||| |||||| | || |||| ||||||||||| | |||||| || |||| || || || ||||||    
T  42178048 ttattttctcttttcctttttctatctctattatttttaaccaataagaagagagaaaaacaaagttgttaccaaagttatcatcaattgaatatacaaa 42177949  T
Q  102 tattattgctctttt 116  Q
    ||| | |||||||||    
T  42177948 tatcactgctctttt 42177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 53662420 - 53662330
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||| |||| ||||| || ||| | || |||| |||||||| ||||||| ||| ||||||| ||||||||||||| |||| |||||||    
T  53662420 tctctcttcattgtttttgactaataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 2193790 - 2193705
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || ||| |||| ||||||| || |||||||||||||||    
T  2193790 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatat 2193705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 19910889 - 19910994
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||||| || |||| ||  | |||| |||| || |||| ||||| |||| ||||||| ||    
T  19910889 tctctcttcctttttctctctccattatttttgaccaataaaaataaagaaaaataagataatcaacaaagttatcatcaaatgaatgtccaaatatcat 19910988  T
Q  108 tgctct 113  Q
    | ||||    
T  19910989 tactct 19910994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 32365648 - 32365563
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||| || ||||||| |||| || |||| |||| |||||||| ||||    
T  32365648 ttttctctctccattgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatat 32365563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 36512932 - 36513028
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 116  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| | ||||||| | |||||||| | ||||||| |||||||||||    
T  36512932 ttttctctctccattgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtc-tcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 52669607 - 52669498
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||| | |||| ||||| || |||||| ||| | |||||| |||| |||| |||||||  || |||| ||| | ||||| |||||||||||||||    
T  52669607 ttatcttctatcttcctttttccctttccattgtttctgaccaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatggatgtacaaa 52669508  T
Q  102 tattattgct 111  Q
    ||| ||||||    
T  52669507 tatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 31049021 - 31049061
Alignment:
Q  74 caaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  31049021 caaagttgtcattaaatggatgtacaaatatcattgctctt 31049061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35580202 - 35580254
Alignment:
Q  21 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 73  Q
    ||||||||||||||||||| |||||| |||| ||||||||| |||||| ||||    
T  35580202 ttctctctccattatttttgaccaatgaaaagagaggaaaaaaaagttgtcac 35580254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 40721956 - 40721900
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaa 64  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| |||||||    
T  40721956 tctctcttcctttttctctctccattatttttgaccaataaaaaaagagaaaaacaa 40721900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 45176709 - 45176665
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  45176709 tctctccattgtttttgaccaatcaaaagagaggaaaacaaagtt 45176665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31048960 - 31049027
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||| ||||| || | ||||||||||||||| ||||| | ||||||||| |||| |||||||||||    
T  31048960 attatcctctctctttctttttctctctccattgtttttgatcaatcaaaagagagaaaaacaaagtt 31049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 43358703 - 43358766
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||||||||| |||  |||| |||||||||||||||| ||||||||||| |||  ||||||||    
T  43358703 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgt 43358766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 45923469 - 45923515
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaag 66  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  45923469 ttttctctctccattatttttgaccaatcaaaa-aaaggaaaacaaag 45923515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 9162145 - 9162219
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||||||||    
T  9162145 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgt 9162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 33484087 - 33483993
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||||||| ||||| | |||| | || |||| |||  || ||| |||||||| ||||||| || ||||||||||||||| ||| ||||    
T  33484087 ttttctctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactct 33483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 47519701 - 47519607
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||||||||||||| || ||| | || | || ||||||| ||| ||| | || || ||||| ||||||||||||||||| | ||||||    
T  47519701 ttttctctctccattatttttaactaataagaagaaagaaaaacaaggttgtcaactaagttatcattcaatggatgtacaaatatcactgctct 47519607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 54165092 - 54165058
Alignment:
Q  79 ttgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||||||||||||||||||||| ||||||||    
T  54165092 ttgtcattaaatggatgtacaaatatcattgctct 54165058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 439294 - 439327
Alignment:
Q  75 aaaattgtcattaaatggatgtacaaatattatt 108  Q
    |||||||||||||||||||||| |||||||||||    
T  439294 aaaattgtcattaaatggatgttcaaatattatt 439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 1562517 - 1562468
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  1562517 ttttctctctctattatttttgaccaatcaaaaaagagaaaaccaaagtt 1562468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 12694361 - 12694316
Alignment:
Q  67 ttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||    
T  12694361 ttatcaccaaaattgtcattagatagatatacaaatatcattgctc 12694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 13182426 - 13182515
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||| ||| ||||| |||||| |||| |||| |||||||  |||||| |||| ||||||| || | ||||||||||||| ||| ||||    
T  13182426 tctctctattgtttttaaccaataaaaaaagagaaaaacaagattatcatcaaagttgtcatcaatttgatgtacaaatatcattactct 13182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 13267459 - 13267375
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || |||| ||| |||||||||    
T  13267459 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgt-atgaaatcgatttacaaatat 13267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 18568796 - 18568711
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||| |||| ||||| |||||| | || | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  18568796 ttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 18568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 20056472 - 20056557
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||| ||| ||||| |||||| | || |||| ||| |||  || |||||||| ||||||| || |||||||||||||||    
T  20056472 ttttctctctcaattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatat 20056557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20956563 - 20956514
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||||| |||| ||||| ||||||||||| |||| |||||||||||    
T  20956563 ttttctctcttcattgtttttgaccaatcaaaagagagaaaaacaaagtt 20956514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 24154704 - 24154794
Alignment:
Q  21 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||||| ||||| |||||  |||| |||  |||| | |||| ||| ||||||| ||||||||| |||||||||||||  |||||||    
T  24154704 ttctctctccattgtttttgaccaacaaaaaaaga--aaaatatagttgtcatcaaaattatcattaaatagatgtacaaatatcgttgctct 24154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 36812384 - 36812335
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  36812384 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 36812335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 39844250 - 39844197
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| |||| ||||    
T  39844250 tctctattcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 39844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39881011 - 39880962
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  39881011 ttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 39880962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 45923517 - 45923550
Alignment:
Q  80 tgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||||||||||||||||| ||||||||    
T  45923517 tgtcattaaatggatgtacaaatatcattgctct 45923550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 48743800 - 48743849
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  48743800 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 48743849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 8681020 - 8681116
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| | |||| | || ||   ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  8681020 tctctcttcctttttctctctccattgtttttgatcaataagaagaggaaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8681116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 12241137 - 12241196
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| |||||||| |||||||||||| |||| |||| ||||||    
T  12241137 tctcttttcctttttctctctctattatttt-taccaatcaaaagagagaaaaataaagtt 12241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 19245967 - 19246031
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||| |||| |||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  19245967 tctctcttcctttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 19246031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 30866445 - 30866533
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||||| ||||||||| || ||| |||| |||| |||  ||| || |||||||| || ||||||||||||| | ||||||| |||||||    
T  30866445 tctctctattatttttgactaataaaaagagagaaaactaaaattgtcaccaaagttatcattaaatggatatccaaatatcattgctc 30866533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 31413772 - 31413704
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    |||| ||||||||||||||||||||| |||||| |||| |||| | ||||| ||| |||| ||| ||||    
T  31413772 ttcctttttctctctccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgt 31413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 33820328 - 33820269
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||| ||||||    
T  33820328 tctcttttcctttttctctctctattattttt-accaatcaaaagagagaaaaataaagtt 33820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 36792417 - 36792481
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    |||| ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||||||||    
T  36792417 ttcctttttctctctccattatttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 36792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38952774 - 38952842
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  || ||||||| ||||||||    
T  38952774 ttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgt 38952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 40756000 - 40756060
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  40756000 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 40756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41119506 - 41119458
Alignment:
Q  20 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| ||||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagtt 41119458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 46173615 - 46173659
Alignment:
Q  7 ttctctattcccttttctctctccattattttttaccaatcaaaa 51  Q
    |||||| |||| ||||||||||||||| |||||||||||| ||||    
T  46173615 ttctctcttcctttttctctctccattgttttttaccaatgaaaa 46173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40478286 - 40478175
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40478286 attatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaa 40478187  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  40478186 atatcattgctc 40478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 41877760 - 41877871
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  41877760 attatcctctctcttcctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaa 41877859  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  41877860 atatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 45295738 - 45295624
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  45295738 attatcctctctcttcctttttctctctacattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagctgtcattaaatggatgtacaa 45295639  T
Q  101 atattattgctcttt 115  Q
    |||| ||||||||||    
T  45295638 atatcattgctcttt 45295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25542970 - 25542867
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||| ||||||| |||| ||| || |||||||||||||||||||    
T  25542970 attatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaccaaagttgtcactaaagttatcattaaatggatgtacaa 25542871  T
Q  101 atat 104  Q
    ||||    
T  25542870 atat 25542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31007351 - 31007233
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt---atcaccaaaattgtcattaaatggatgta 97  Q
    |||||| ||||| |||| |||||||| | |||| ||||| ||||||||||| ||||||||||||||||   | ||||||| || |||||||||| |||||    
T  31007351 attatcctctctcttcctttttctcttttcattgtttttaaccaatcaaaagagaggaaaacaaagttgtcaccaccaaagttatcattaaatgaatgta 31007252  T
Q  98 caaatattattgctctttt 116  Q
    ||||||| |||||||||||    
T  31007251 caaatatgattgctctttt 31007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 42718193 - 42718301
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  |||||||||| |||||||||||||||||||||| |||||||     
T  42718193 attatattctcttttcttttttctctcttcattgtttttgaccaatcaaaagagag--aaacaaagttgtcaccaaaattgtcattaaatgaatgtacat 42718290  T
Q  101 atattattgct 111  Q
    |||| ||||||    
T  42718291 atatcattgct 42718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 35756053 - 35756163
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||||| |||| ||||||||||    
T  35756053 ttatcatctctcttcatttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaa 35756152  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  35756153 tatgattgctc 35756163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 52454090 - 52453980
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||| ||| ||||||| |||||||||||||||    
T  52454090 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaa 52453991  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  52453990 tatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 34021461 - 34021348
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  ||||||||||||||    
T  34021461 ttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaa 34021362  T
Q  102 tattattgctcttt 115  Q
    ||| ||||||||||    
T  34021361 tatcattgctcttt 34021348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 11327181 - 11327297
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| |||||||||||||||    
T  11327181 ttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 11327280  T
Q  102 tattattgctcttttca 118  Q
    ||| |||||||||||||    
T  11327281 tatcattgctcttttca 11327297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 13159734 - 13159845
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  13159734 ttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 13159833  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  13159834 tatcattgctct 13159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 43900862 - 43900957
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    ||||||||||||||||||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| |||||||||    
T  43900862 ttttctctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctctt 43900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 25142700 - 25142782
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 83  Q
    |||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||||||||| ||||||||| |||||    
T  25142700 attatcctctctcttcctttttctctctccattgtttttgaccaattaaaagagaggaaaacaaagtaatcaccaaagttgtc 25142782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 50280085 - 50279971
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||  ||| ||||||| |||||||||||||||    
T  50280085 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 50279986  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  50279985 tatcattgctctttt 50279971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 50879668 - 50879782
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| |||| ||||||||||||||| | ||| |||||| | || |||| | ||||||||| |||| ||| |||||||  ||||||||||||||    
T  50879668 ttatcttctctcttcctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatggatgtacaaa 50879767  T
Q  102 tattattgctctttt 116  Q
    ||| ||| |||||||    
T  50879768 tatcatttctctttt 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 30400154 - 30400041
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||||||||||||    
T  30400154 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaa 30400055  T
Q  102 tattattgctcttt 115  Q
    ||| ||||||||||    
T  30400054 tataattgctcttt 30400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 14992187 - 14992259
Alignment:
Q  41 accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||| |||  ||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||    
T  14992187 accaatcaaaaaagaataaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcatttctct 14992259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 28263618 - 28263730
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||| ||| ||||||| ||||||||| |||||    
T  28263618 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatggatgaacaaa 28263717  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  28263718 tatcattgctctt 28263730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 54233482 - 54233397
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  54233482 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 54233397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 36819029 - 36819141
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  36819029 ttatcctctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 36819128  T
Q  102 tattattgctctt 114  Q
    ||| |||| ||||    
T  36819129 tatcattgttctt 36819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 8254100 - 8254211
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| |||||  || || | || ||||  ||| || ||| |||| ||||||||||| |||||||||||||||    
T  8254100 ttatcatctctcttcctttttctctctccattgtttttagccgataagaagagagagaaataatgttgtcactaaaattgtcatgaaatggatgtacaaa 8254199  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  8254200 tatcattgctct 8254211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 2009744 - 2009829
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatt 105  Q
    ||||||||||||||||||||| |||||| | || |||| ||| ||| ||| |||||||| |||||| ||||| ||||||||||||||    
T  2009744 ttttctctctccattatttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtca-taaattgatgtacaaatatt 2009829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 23163143 - 23163029
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||||||| |||| ||||| |||||| | || |||| |||||||| || |||| |||||||||||  ||| |||||  |||    
T  23163143 ttatcctctctcttcctttttctctcttcattctttttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatggaattgatgtctaaa 23163044  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  23163043 tatcattgctctttt 23163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 23906968 - 23906883
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  23906968 ttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 23906883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 51717531 - 51717616
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||| ||||||||||||||||||||||  | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  51717531 ttttttctctccattattttttaccaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 51717616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 53102894 - 53102786
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||| |||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  53102894 tctctcttcctttttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 53102795  T
Q  108 tgctctttt 116  Q
    ||| |||||    
T  53102794 tgccctttt 53102786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 20714316 - 20714423
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| || ||| |||| |||||| ||||  ||||||||||||||    
T  20714316 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtcactaaaattatcatggaatggatgtacaaa 20714415  T
Q  102 tattattg 109  Q
    ||| ||||    
T  20714416 tatcattg 20714423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 46344487 - 46344598
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||| |||||||||||||| |||||| | || | || |||| || ||| |||| ||| ||||| | ||||| |||||||||    
T  46344487 ttatcctctctcttcctttttctttctccattatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaa 46344586  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  46344587 tatcattgctct 46344598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3958016 - 3957906
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || | || ||||||| ||| |||| ||| ||||| |  ||||||||||||||    
T  3958016 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatggatgtacaaa 3957917  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  3957916 tatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 43441760 - 43441845
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||||||||| |||||| |||| |||| |||  || ||| ||  |||| ||||||| || |||||||||||||||    
T  43441760 ttttctctctccattatttttgaccaataaaaaaagagaaaagtaaggttgtcgtcaaagttgtcatcaattggatgtacaaatat 43441845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 44855336 - 44855433
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 111  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| |||| ||  || |||| ||| ||||||| |||| ||||||||||||| ||||||    
T  44855336 ttcctttttctctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaattgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 3069573 - 3069462
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| || |||||||||||| ||||| |||||| | || |||| |||||||  ||  ||| ||| |||||||  ||||||||| ||||    
T  3069573 ttatcctctctcttcctttatctctctccattgtttttgaccaataagaagagagaaaaacaagattcccactaaagttgtcatggaatggatgtgcaaa 3069474  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  3069473 tatcattgctct 3069462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 7039174 - 7039123
Alignment:
Q  60 aacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 111  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  7039174 aacaaggttatcactaaaattgtcatgaaatggaagtacaaatatcattgct 7039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 32687941 - 32687882
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||  |||||||||||||||    
T  32687941 ttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaa 32687882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 32931896 - 32931809
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 109  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||  | |||||||||||||||||| ||||    
T  32931896 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattg 32931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37303072 - 37303013
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  37303072 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 37303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 47056524 - 47056421
Alignment:
Q  2 ttatcttctctattcccttttctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||||||||| |||| ||||||||||| |||  ||||| ||||||  ||| |||| |||  || ||| ||| |||||||||||| || |||||||||||    
T  47056524 ttatcttctctcttcctttttctctctcaattggtttttgaccaatagaaagagagaaaagtaaggttgtcatcaaaattgtcatcaactggatgtacaa 47056425  T
Q  101 atat 104  Q
    ||||    
T  47056424 atat 47056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 47484369 - 47484432
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||||||||||||| ||||| |||||| |||| |||| | |||||||||||| | ||||||||    
T  47484369 ttttctctctccattgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 50652460 - 50652563
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||| ||||||||||| ||||| |||||| | || |||| ||| |||| || ||| |||||||||||| || |  ||||||||    
T  50652460 attatcctctctcttccttttactctctccattgtttttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtcatcaattaaatgtacaa 50652559  T
Q  101 atat 104  Q
    ||||    
T  50652560 atat 50652563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3483209 - 3483263
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 73  Q
    ||||||||||||||||||||||| |||| |||| |||| |||| |||||| ||||    
T  3483209 ttttctctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcac 3483263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 7949873 - 7949927
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||| |||| ||||||    
T  7949873 ttcctttttctctctccattttttttaaccaatcaaaagagagaaaaataaagtt 7949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 9027963 - 9028047
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||||||||  |||| ||||| |||| ||||| || || |||||| ||| |||||||    
T  9027963 ttttctctctccattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgt-atcaaatggttgttcaaatat 9028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 26279963 - 26280016
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||||||||    
T  26279963 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagaggaaaa 26280016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 27162459 - 27162358
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| | || |||  |||||| |||  ||| |||||| |||||| ||||| |||||| ||    
T  27162459 tctctcttcctttttttctctccattatttttaaccaataaaaagatagaaaagtaaagttgtcaataaagttgtcaataaatgaatgtagaaatatcat 27162360  T
Q  108 tg 109  Q
    ||    
T  27162359 tg 27162358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 32457747 - 32457694
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  32457747 tctctcttcctttttctctctccattatttttaaccaatgaaaagagagaaaaa 32457694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 38957499 - 38957402
Alignment:
Q  17 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||||||| |||||||||||||| |||||| |||| |||  |||| |   ||||| | ||| || ||||||||| ||| ||||||||| |||||||||    
T  38957499 ccttttctttctccattatttttgaccaataaaaagagaaaaaaatatgattatcgctaaagttatcattaaatagatatacaaatatcattgctctt 38957402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 1208025 - 1208120
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||| ||||||| |||||||  ||| | || |||| ||| ||||||| |||||||| ||| ||| || |||||||||||||||    
T  1208025 tctcttttcctttttctc-ctccattgttttttattaataagaagagagaaaatcaaagttgtcaccaaagttgacatcaattggatgtacaaatat 1208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 1765483 - 1765515
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaa 51  Q
    |||||||||||||||||||||||||||| ||||    
T  1765483 ttttctctctccattattttttaccaatgaaaa 1765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 11173529 - 11173636
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||||||||  |||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| ||||||||||    
T  11173529 tctctcttcctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatattat 11173627  T
Q  108 tgctctttt 116  Q
    | |||||||    
T  11173628 tactctttt 11173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 20080122 - 20080082
Alignment:
Q  63 aaagttatcaccaaaattgtcattaaatggatgtacaaata 103  Q
    |||||| |||| |||||||||||||||||||||| ||||||    
T  20080122 aaagttgtcacaaaaattgtcattaaatggatgttcaaata 20080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 23183686 - 23183606
Alignment:
Q  33 tattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||| |||||| ||| ||||| ||   ||| || |||||||| || ||||||||||||||||||||||| ||| ||||    
T  23183686 tatttttgaccaataaaactagagaaatttaaaattgtcaccaaagttatcattaaatggatgtacaaatatcatttctct 23183606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 33007439 - 33007515
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaaca-aagttatcaccaaaattgtc 83  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| | ||||| |||| |||||||||    
T  33007439 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtc 33007515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 42864246 - 42864202
Alignment:
Q  70 tcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||||||| ||||||||| || ||||||||||||| |||||||||    
T  42864246 tcaccaaagttgtcattagatagatgtacaaatatcattgctctt 42864202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 49130933 - 49131028
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| || ||| |||| ||||  |||  ||||| |||| ||||||||| | |||||||||| |||||||    
T  49130933 tctctcttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtc-tcaaatggatgttcaaatat 49131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 52678557 - 52678521
Alignment:
Q  36 tttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    |||| |||||||||||||||| |||||||||||||||    
T  52678557 ttttaaccaatcaaaatagagaaaaacaaagttatca 52678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 11089664 - 11089763
Alignment:
Q  17 ccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||||| ||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11089664 ccttttctctctctattattttttaaccaatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcttt 11089763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 43587720 - 43587828
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||||||||||||||  |||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||||| ||    
T  43587720 tctctcttcctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatcat 43587819  T
Q  108 tgctctttt 116  Q
    |||||||||    
T  43587820 tgctctttt 43587828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 38504260 - 38504353
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||| ||||| ||||||||||| |||| |||||||| || ||||||||||||| ||||||||||||||||||||| |||||||    
T  38504260 ttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34972139 - 34972248
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||||||||| |||  |||| |||||||||||||||| | ||||||||| |||| |||||||| || |||||||| |||||||||||| |||||||||    
T  34972139 attatcttctctcttc--ttttttctctccattatttttgatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgtcattaaatagatgtacaa 34972236  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  34972237 atatcattgctc 34972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 43602415 - 43602311
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||||| |||  ||| ||||| ||||||||||| ||||  |||||||||| |||||||| |||||||||||||||||||||||||| ||    
T  43602415 tctcttttcctttttctttctatattgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcat 43602316  T
Q  108 tgctc 112  Q
    |||||    
T  43602315 tgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 23952567 - 23952673
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    |||||||||||||| | ||||||||||||||||||||| |||||| |||| |||| |||||||| ||||||| ||| ||||||| |||| || |||||||    
T  23952567 ttatcttctctatttc-ttttctctctccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgtcataaaatagacgtacaaa 23952665  T
Q  102 tattattg 109  Q
    ||| ||||    
T  23952666 tatcattg 23952673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 1065490 - 1065604
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||  | || | || ||||||| |||||||| ||| |||||||  ||||||||||||||    
T  1065490 ttatcctctctcttcctttttctctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatggatgtacaaa 1065589  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  1065590 tatcattgctctttt 1065604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 30927929 - 30927819
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| |||||||||||||||    
T  30927929 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 30927830  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  30927829 tatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 41273588 - 41273702
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  ||||||||||||||    
T  41273588 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaa 41273687  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  41273688 tatcattgctctttt 41273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 6105416 - 6105323
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||| ||||| |||| ||||| ||||||||||| ||||||||| |||||| |||| ||| ||||| |||||||||||||||| ||| |||||||    
T  6105416 ttttttctctacattgtttttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaatggatgtacaagtatcattgctc 6105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 6825269 - 6825161
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || |||  ||||||| |||||| ||||| ||||||||||||||||    
T  6825269 tctctgttcctttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatattat 6825170  T
Q  108 tgctctttt 116  Q
    || ||||||    
T  6825169 tgttctttt 6825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 41293719 - 41293613
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||| ||||| |||| ||| |||||||  ||||||||||||||    
T  41293719 ttatcttctctcttccattttctctctccattgtttttgaccaataagaagagagaaaaac-aagttgtcactaaagttgtcatggaatggatgtacaaa 41293621  T
Q  102 tattattg 109  Q
    ||| ||||    
T  41293620 tatcattg 41293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 39259053 - 39258943
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||||||  ||||||  |||||||||||  ||||||||||||||    
T  39259053 ttatcatctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaa 39258954  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  39258953 tatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 11138986 - 11139071
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||| |||||||||| |||||| |||| | || ||||||||||| |||||||| ||||||| || | |||||||||||||    
T  11138986 ttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatat 11139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 30129500 - 30129584
Alignment:
Q  20 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||||||||||||| |||||| | || |||| ||| ||||||| |||||||| ||||||| || |||||||||||||||    
T  30129500 tttctttctccattatttttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatat 30129584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 19723204 - 19723093
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| | || ||||||||||    
T  19723204 ttatcctctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatagatgtacaaa 19723105  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  19723104 tatcattgctct 19723093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 2597146 - 2597056
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || || ||||||||||||    
T  2597146 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatat 2597056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 33817247 - 33817337
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 109  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||||| || |||| ||||||||||||| ||||    
T  33817247 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 5925145 - 5925230
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||||||||| |||||| | ||||||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5925145 ttttctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatat 5925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 14228786 - 14228879
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||| |||| ||||| |||||| |||| |||| |||| ||| || |||| |||||| |||| ||||||||||||| |||| ||||||||||    
T  14228786 tctctcttcattgtttttgaccaataaaaaaagagaaaaataaaattgtcactaaaattatcatgaaatggatgtacatatatcattgctcttt 14228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 37562133 - 37562037
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| |||||| |||||||| ||||| |||||| | || |||| ||||||| ||| ||| |||| ||||||| || |||||||||||||||    
T  37562133 tctctcttcctttttctttctccattgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatat 37562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29509338 - 29509405
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||| ||||| |||| |||||||||| |||| ||||| |||||| |||| ||||||||||||||||    
T  29509338 attatcctctctcttcctttttctctcttcattgtttttgaccaataaaaagagaggaaaacaaagtt 29509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 6849466 - 6849408
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaa 60  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  6849466 ttattttctctcttcctttttctctctctattattttttaccaatagaaatagaggaaa 6849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 11879482 - 11879412
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11879482 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11879412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 11896898 - 11896828
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11896898 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11896828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 36064103 - 36064205
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||| |||||||||||||||| |||||| |||| |||  ||| |||  || |||||||| || |||| || ||||||||||||    
T  36064103 ttatcatctctcttcctttttttctctccattatttttgaccaataaaaagagataaaagcaagtttgtcaccaaagttatcatcaattggatgtacaaa 36064202  T
Q  102 tat 104  Q
    |||    
T  36064203 tat 36064205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 36497734 - 36497836
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||||||| || | ||||||||||| ||| ||||| |||||| |||| |||| ||||||| ||| | | |||| ||||||| || | ||||||||||    
T  36497734 ttatcttctctcttactttttctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaa 36497833  T
Q  102 tat 104  Q
    |||    
T  36497834 tat 36497836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 43186386 - 43186469
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||||||||  ||||||| || |||| |||||||| ||  |||| ||||||||||||    
T  43186386 ttttctctctccattgtttttgaccaataaaaatagag--aaacaaaattgtcactaaaattgttatggaatgaatgtacaaatat 43186469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 5924900 - 5924985
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||||||||| |||||| | || |||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5924900 ttttctctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatat 5924985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 12783815 - 12783762
Alignment:
Q  63 aaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 116  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||| |||||||    
T  12783815 aaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctttt 12783762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 34765831 - 34765746
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||  || ||| |||| ||||||||||| || | |||||||||||||    
T  34765831 ttttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgtcatcaattagatgtacaaatat 34765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 36593778 - 36593673
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| | ||||||||||||| |||||  | ||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  36593778 tctctcttccttcttctctctccattgtttttggctaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 36593679  T
Q  108 tgctct 113  Q
    ||||||    
T  36593678 tgctct 36593673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 37033093 - 37033029
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 73  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||||||||    
T  37033093 tctcttttcctttttctctctccattgtttttgaccaatgaaaa-agaggaaaaaaaagttatcac 37033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 39153665 - 39153612
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  39153665 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagttatca 39153612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 40211728 - 40211635
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||   || | || |||| ||| ||||||||||||||||| |||||||    
T  40211728 ttttctctctccattgtttttaaccaataagaagagagaaaaacaaagtatacaactaagttgttattcaatggatgtacaaatatcattgctc 40211635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 30925652 - 30925577
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| ||| ||||| |||||| |||||||||    
T  30925652 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 30925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 40719636 - 40719576
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  40719636 tctctcttcctttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 40719576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 6746041 - 6745926
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| ||||| |||| ||||||| | ||||| ||||| | |||| | || |||| ||||| ||| || |||| |||||||||||  |||||||||||||    
T  6746041 ttatcctctctcttcctttttctccccccattgtttttaatcaataagaagagagaaaaactaaggttgtcactaaaattgtcatggaatggatgtacaa 6745942  T
Q  101 atattattgctctttt 116  Q
    |||  |||||||||||    
T  6745941 ataccattgctctttt 6745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 41519951 - 41520010
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagagg-aaaacaaagttatcaccaaaatt 80  Q
    |||||||||||| ||||| |||||| |||| ||||| ||||||| |||||||||||||||    
T  41519951 tctctctccattgtttttgaccaataaaaagagaggaaaaacaaggttatcaccaaaatt 41520010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 44086503 - 44086440
Alignment:
Q  9 ctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    |||| ||||||||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  44086503 ctctcttcccttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 44086440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 6656337 - 6656227
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6656337 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6656238  T
Q  102 tattattgctc 112  Q
    ||  |||||||    
T  6656237 taccattgctc 6656227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 6736739 - 6736629
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6736739 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6736640  T
Q  102 tattattgctc 112  Q
    ||  |||||||    
T  6736639 taccattgctc 6736629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 7129618 - 7129707
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||| |||||||||||| || ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||| ||||||||||||    
T  7129618 ttcctttttctctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatgaatgtacaaatat 7129707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 8888326 - 8888428
Alignment:
Q  3 tatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta-aatggatgtacaaa 101  Q
    |||| ||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||| ||| ||| |||||||| |||||| || ||||||| ||||||    
T  8888326 tatcctctctcttcctttttctctctccattgtttttaaccaataagaaatgagaaaatcaaggttgtcaccaaagttgtcactataatggatatacaaa 8888425  T
Q  102 tat 104  Q
    |||    
T  8888426 tat 8888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20288606 - 20288716
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  20288606 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 20288705  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  20288706 tatcattgctc 20288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 21075235 - 21075345
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  21075235 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 21075334  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  21075335 tatcattgctc 21075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 22836131 - 22836057
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| | ||||| |||||| | ||||||||    
T  22836131 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgt 22836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 34474028 - 34474137
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag-gaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatt 105  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||  ||||| ||||||||| |||| || |||||| ||| |||||||     
T  34474028 tctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagagaaaaagaagttgtcaccaaaagttgt-atgaaatggttgttcaaatatc 34474126  T
Q  106 attgctctttt 116  Q
    ||| |||||||    
T  34474127 attactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 35595300 - 35595390
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 109  Q
    |||||| |||||||| |||||||||||| | || |||| ||| ||| ||| |||||||| || |||||| |  ||||||||||||| ||||    
T  35595300 ttttctttctccattgttttttaccaataagaagagagaaaagcaaggttgtcaccaaacttatcattagacagatgtacaaatatcattg 35595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 9208114 - 9208065
Alignment:
Q  64 aagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||| |||| |||||||||||||||||||||| ||||||| ||| ||||    
T  9208114 aagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 9208065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 13565483 - 13565402
Alignment:
Q  35 ttttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 116  Q
    |||||||||||| | |||| || ||| ||| ||| |||  ||| |||| ||||||| ||||||||||||| |||||||||||    
T  13565483 ttttttaccaataagaataaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatcattgctctttt 13565402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 27630934 - 27630893
Alignment:
Q  75 aaaattgtcattaaatggatgtacaaatattattgctctttt 116  Q
    ||||||||||| |||||||||||||||||| ||| |||||||    
T  27630934 aaaattgtcataaaatggatgtacaaatatcatttctctttt 27630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 28473537 - 28473484
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  28473537 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 28473484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 30608691 - 30608642
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||||||  |||||||||||||||||||| | || |||||||||||    
T  30608691 ttttctctctctgttattttttaccaatcaaaagatagaaaaacaaagtt 30608642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 34970300 - 34970389
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||||| ||||| |||||| | || |||| ||||||||||| | || ||| ||||| ||||||| ||||  |||||| ||||||||    
T  34970300 tctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctct 34970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 39027557 - 39027606
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaa 51  Q
    |||| |||||| || | |||||||||||||||||||||||||||| ||||    
T  39027557 ttattttctctctttctttttctctctccattattttttaccaataaaaa 39027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 22767208 - 22767284
Alignment:
Q  7 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 83  Q
    |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||||    
T  22767208 ttctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtc 22767284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 37568590 - 37568498
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||||||| ||| ||||| |||||| | || | || ||||||| ||| |||| ||| || | || |||||||||||||||||| |||||||||    
T  37568590 tctctctctattgtttttgaccaataagaaaaaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctctt 37568498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 40102102 - 40102150
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  40102102 tctctcttcctttttctctctccatttttttttaccaatgaaaagagag 40102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 7077325 - 7077227
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  7077325 ttcctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 30574375 - 30574261
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  ||||||||||||||    
T  30574375 ttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaa 30574276  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  30574275 tatcattgctctttt 30574261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36548379 - 36548265
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||||||||||||| ||||  | |||| ||||||||| ||||||| ||| ||| |||| ||||||||| ||||||||||||    
T  36548379 attatcctctctcttcctttttctctctccattgttttcaatcaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatggatgtacaa 36548280  T
Q  101 atattattgctcttt 115  Q
    |||| ||||||||||    
T  36548279 atatcattgctcttt 36548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 19271944 - 19272044
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  19271944 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcatataatagatgtacaaatatcattgctct 19272043  T
Q  114 t 114  Q
    |    
T  19272044 t 19272044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 12512866 - 12512981
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||||||||||||    
T  12512866 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaa 12512965  T
Q  102 tattattgctcttttc 117  Q
    ||| ||||||||||||    
T  12512966 tatcattgctcttttc 12512981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26685763 - 26685874
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |||||||||    
T  26685763 attatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaa 26685862  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  26685863 atatcattgctc 26685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26955494 - 26955605
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |||||||||    
T  26955494 attatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaa 26955593  T
Q  101 atattattgctc 112  Q
    |||| |||||||    
T  26955594 atatcattgctc 26955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 32634781 - 32634888
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||| | |||||||||||| | || |||| |||||||| ||||||| |||||||||||  ||||||||||||||    
T  32634781 ttatcctctcttttcatttttctctctccaatgttttttaccaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatggatgtacaaa 32634880  T
Q  102 tattattg 109  Q
    ||| ||||    
T  32634881 tatcattg 32634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3263506 - 3263396
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  3263506 ttatcctctctctttctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 3263407  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  3263406 tatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15622117 - 15622227
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  15622117 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 15622216  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  15622217 tatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 38010945 - 38011059
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||  |||||||| || |||| |||||||||||  ||| ||||||||||    
T  38010945 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatagatgtacaaa 38011044  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  38011045 tatcattgctctttt 38011059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 11464121 - 11464008
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| ||  ||||||||||||||    
T  11464121 ttatcatctctcttcatttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaa 11464022  T
Q  102 tattattgctcttt 115  Q
    ||| ||||||||||    
T  11464021 tatcattgctcttt 11464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 30776709 - 30776804
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||| ||||||||||||||||||||||| |||| ||||  ||||||| || |||| ||| ||||||| ||||  |||||||||||| |||||||||    
T  30776709 ttttttctctccattattttttaccaataaaaagagagagaaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatcattgctctt 30776804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 4292873 - 4292967
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||||||| || ||||| |||||| | ||||||| ||||||||||| ||| |||||||||||| ||||| |||| ||||||| ||| ||||    
T  4292873 ttttctctctccgttgtttttgaccaataagaatagagaaaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactct 4292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 3154641 - 3154528
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| || ||| |||| |||| |||| |||||| |||||||||||||||| || |  |||||||||    
T  3154641 ttatcatctctcttcatttttctctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaa 3154542  T
Q  102 tattattgctcttt 115  Q
    ||| ||| ||||||    
T  3154541 tatcattactcttt 3154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8959250 - 8959335
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  8959250 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 8959335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 9594551 - 9594667
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| || ||| |||| ||| |||||||  ||||||||||||||    
T  9594551 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatggatgtacaaa 9594650  T
Q  102 tattattgctcttttca 118  Q
    ||| |||||||||||||    
T  9594651 tatcattgctcttttca 9594667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 12417699 - 12417811
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||| |||||  ||||||||||||||| ||||| |||||  | || |||| || |||||||| |||||||| ||||| | |||| ||||||||||    
T  12417699 ttatcctctgtattcatttttctctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgtcgtgaaatagatgtacaaa 12417798  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  12417799 tatcattgctctt 12417811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 35972662 - 35972756
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||||||||||||| | |||| |||| |||| |||| || ||| ||||||||||| ||| ||||| ||||||||||||| ||||||||||    
T  35972662 ttttctctctccattattttt-atcaataaaaagagag-aaaataaggttgtcaccaaaattatcaataaattgatgtacaaatatgattgctcttt 35972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 33823692 - 33823585
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  33823692 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 33823593  T
Q  102 tattattg 109  Q
    ||| ||||    
T  33823592 tatcattg 33823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 9596812 - 9596702
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  |||| |||||||||    
T  9596812 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaa 9596713  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  9596712 tatcattgctc 9596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 17489438 - 17489523
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||||||| ||||||| || |||||||||||||||    
T  17489438 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatat 17489523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 31006152 - 31006196
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  31006152 tctcttcattatttttgaccaatcaaaatagaggaaaacaaagtt 31006196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 28501690 - 28501777
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaa 89  Q
    ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||| ||||    
T  28501690 ttatcatctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcactaaa 28501777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 4954539 - 4954649
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| ||| || | || |||| ||||||| ||| |||| ||| |||| ||  |||||||||| |||    
T  4954539 ttatcctctctcttcctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgttatagaatggatgtagaaa 4954638  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  4954639 tatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10522848 - 10522958
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| || | ||  |||| || ||||||    
T  10522848 ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttattatggaatgaatatacaaa 10522947  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  10522948 tatcattgctc 10522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 41192672 - 41192726
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  41192672 ttcctttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaagtt 41192726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 22920490 - 22920377
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| | | |||||||  ||| ||||||||||    
T  22920490 ttatcatctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatagatgtacaaa 22920391  T
Q  102 tattattgctcttt 115  Q
    ||| || |||||||    
T  22920390 tatcatcgctcttt 22920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 34381091 - 34381163
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 80  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||| ||||| |||| ||||||    
T  34381091 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaatt 34381163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 12401282 - 12401365
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaat 102  Q
    |||||| |||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| ||||||| ||||||||||||||||    
T  12401282 ttttctgtctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaat 12401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 10232578 - 10232648
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  10232578 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 10232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 12661939 - 12661869
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  12661939 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 12661869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 25345411 - 25345521
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||  ||| ||||| |||||| | || |||| |||| ||  || |||| |||||||| ||  ||||||||||||||    
T  25345411 ttatcatctctcttcctttttctctctttattgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatggatgtacaaa 25345510  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  25345511 tatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 34888846 - 34888884
Alignment:
Q  79 ttgtcattaaatggatgtacaaatattattgctcttttc 117  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  34888846 ttgtcattaaatggatgttcaaatattatttctcttttc 34888884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 372701 - 372616
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||| |||| ||||| || ||| |||| | || ||| ||| ||| ||||||||||| |||| || |||||||||||||||    
T  372701 ttttctctcttcattgtttttgactaataaaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatat 372616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 14914460 - 14914544
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||  ||||||||||| ||| |||| || | || ||||||||||||||||||    
T  14914460 ttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttat-atgaaatggatgtacaaatat 14914544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 20719996 - 20719912
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  20719996 ttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 20719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 31006195 - 31006228
Alignment:
Q  79 ttgtcattaaatggatgtacaaatattattgctc 112  Q
    |||||||||||||||||||||||||| |||||||    
T  31006195 ttgtcattaaatggatgtacaaatatcattgctc 31006228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 32873130 - 32873081
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  32873130 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 32873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25038159 - 25038223
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||  |||  ||||||||||    
T  25038159 tctctcttcctttttctctctctattatttttaaccaatcaaaagagataaaactaaagttatca 25038223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 36416054 - 36415994
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| | ||||||| ||||||||||| |||| ||| |||||||    
T  36416054 tctctcttcctttttctctctctagtatttttgaccaatcaaaagagagaaaaccaaagtt 36415994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 39595353 - 39595448
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| |||||||    
T  39595353 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatat 39595448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 30413730 - 30413620
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  30413730 ttatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatgtacaaa 30413631  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  30413630 tatcattgctc 30413620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43936458 - 43936345
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  43936458 attatcttctctcttcc-ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaaattatcaccaaaattgtgattaaat-gatgtacaa 43936361  T
Q  101 atattattgctctttt 116  Q
    |||| |||||||||||    
T  43936360 atatcattgctctttt 43936345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 33003902 - 33004007
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||| ||||||||||| ||||||| |||| |||| ||||||||| || |||||||||||| ||||||||||| |||||||||||||| ||    
T  33003902 tctcttttccttttcctctctccattgttttttatcaataaaaacagaggaaaaaaaggttatcaccaaagttgtcattaaaaggatgtacaaatatcat 33004001  T
Q  108 tgctct 113  Q
    ||||||    
T  33004002 tgctct 33004007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 10550457 - 10550346
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||||| ||| |||| ||||||| |||||||||| ||||    
T  10550457 ttatcctctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaa 10550358  T
Q  102 tattattgctct 113  Q
    ||| ||| ||||    
T  10550357 tatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12175327 - 12175217
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||| ||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||| || |||||||||  ||||||||    
T  12175327 attatcctctctcttcctttttttctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataaatgtacaa 12175228  T
Q  101 atattattgct 111  Q
    |||| ||||||    
T  12175227 atatcattgct 12175217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 36582344 - 36582441
Alignment:
Q  17 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||||||||||| |||| ||||| |||||| | ||||||| ||||||| ||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  36582344 ccttttctctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctctt 36582441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 37966429 - 37966536
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| |||||||||||||||    
T  37966429 ttatcctctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 37966528  T
Q  102 tattattg 109  Q
    ||| ||||    
T  37966529 tatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 44484654 - 44484544
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| |||| ||||||||||    
T  44484654 ttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaa 44484555  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  44484554 tatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 38021435 - 38021539
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||  ||||||| || |||||||| || ||||||||| ||||||||||||| ||    
T  38021435 tctctcttcctttttctctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaagttatcattaaat-gatgtacaaatatcat 38021533  T
Q  108 tgctct 113  Q
    ||||||    
T  38021534 tgctct 38021539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 3196085 - 3195973
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  ||||||||||||||    
T  3196085 ttatcatctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaa 3195986  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  3195985 tatcattgctctt 3195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33030101 - 33029989
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| | ||| |||| ||||||||||||||| ||||  |||||| ||||||||| ||||||| ||| ||| |||| ||||||||| || |||||||||    
T  33030101 attatcctttctcttcctttttctctctccattgttttcaaccaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtacaa 33030002  T
Q  101 atattattgctct 113  Q
    |||| ||||||||    
T  33030001 atatcattgctct 33029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 5962728 - 5962813
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||||||||||||||| |||| || | |||||||||||||    
T  5962728 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcaccaaaattatcatcaattagatgtacaaatat 5962813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 30973983 - 30973895
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 96  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||| |||||||||| | ||||||||||    
T  30973983 tctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtcttcaaatggatgt 30973895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 22353173 - 22353066
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||||| | |||| ||||  |||||| | || |||| || |||| ||||||||||||||| ||||||||||||||||||||    
T  22353173 ttatcctctctcttcctttttctcttttcattgttttcgaccaataagaagagagaaatacaaggttatcaccaaaattatcattaaatggatgtacaaa 22353074  T
Q  102 tattattg 109  Q
    ||| ||||    
T  22353073 tatcattg 22353066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27540087 - 27540158
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    |||||| ||||| |||| ||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||    
T  27540087 attatcctctctcttcctttttctctctccaatgtttttgaccaatcaaaaaagaggaaaacaaagttatca 27540158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 23048069 - 23047971
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||    
T  23048069 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 29871353 - 29871239
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||||||| ||||||| |||| |||| |||||    
T  29871353 ttatcctctctcttcttttttctctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaatagatggacaaa 29871254  T
Q  102 tattattgctctttt 116  Q
    ||| || ||||||||    
T  29871253 tatcatggctctttt 29871239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 6884983 - 6885095
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||| |||||||| ||||| || ||| | || |||| ||||||||||| |||| ||| ||||||| ||||| |||||||||    
T  6884983 ttatcctctctcttcttttttctatctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatgaatgtacaaa 6885082  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  6885083 tatcattgctctt 6885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 12192026 - 12192122
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||| ||| ||| |||||||| || | || || |||||||||||||||    
T  12192026 tctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaagcaaggttgtcaccaaagttattatcaattggatgtacaaatat 12192122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 9695042 - 9694955
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatta 106  Q
    |||||||||| |||||||||| ||| || ||||||||| ||| ||| ||| |||||||| ||||||| || ||||| |||||||||||    
T  9695042 ttttctctcttcattatttttgaccgataaaaatagagaaaagcaaggttgtcaccaaagttgtcatcaattggatttacaaatatta 9694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 30192349 - 30192236
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| |||||||||  |||||| |||||||| |||||||||||| |||| |||| ||| ||| ||| ||  | ||||| |||| || ||||||||||||    
T  30192349 ttatcctctctattcatttttctttctccattgttttttaccaataaaaaaagagaaaagcaaggttttcgtccaaattatcatcaattggatgtacaaa 30192250  T
Q  102 tattattgctcttt 115  Q
    ||| ||| ||||||    
T  30192249 tatcattactcttt 30192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 36909824 - 36909740
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  36909824 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatat 36909740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 4097068 - 4097128
Alignment:
Q  53 agaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||    
T  4097068 agagaaaaacaaggttgtcaccaaaattgttattaaatggatggacaaatatcattgctct 4097128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34139030 - 34138959
Alignment:
Q  8 tctctattcccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    |||| ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||| || ||||||    
T  34139030 tctcaattcctttttctctctccattgttttttaaccaatgaaaatagaggaaaaaaaagttgtcgccaaaa 34138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 38246749 - 38246638
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||| ||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  ||| ||||||||||    
T  38246749 ttatcctctctcttcctttttctccctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattgatgtacaaa 38246650  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  38246649 tatcattgctct 38246638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 23391141 - 23391247
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||||| |||||||||||||| | |||| | || |||| ||||||||||| || | ||| || ||||  ||||||||||||||||| ||    
T  23391141 tctctcttcctttttctttctccattatttttgatcaataagaagagagaaaaacaaagttgtcgctaaagttatcatggaatggatgtacaaatatcat 23391240  T
Q  108 tgctctt 114  Q
    | |||||    
T  23391241 tcctctt 23391247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 26809579 - 26809665
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaa-caaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| ||||||  ||| | | ||||| |||| |||||||||||||||||| || || |||||||||||||    
T  26809579 ttttctctctccattgtttttaaccaatagaaaaataagaaaatcaaaattatcaccaaaattgtcactatatagatgtacaaatat 26809665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 29893683 - 29893793
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| | |||| | || |||| |||||||| || |||| ||| || ||||  ||||||| ||||||    
T  29893683 ttatcctctctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaacttatcatagaatggatatacaaa 29893782  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  29893783 tatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 36383535 - 36383633
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| || |||| |||||||||    
T  36383535 ttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgaaattgatgtacaa 36383633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 12358403 - 12358488
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||| |||| ||||| |||||| |||| | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  12358403 ttttctctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 12358488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 13466056 - 13466007
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  13466056 ttttctctctctattaattttgaccaatcaaaatagagaaaaacaaagtt 13466007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 14954591 - 14954522
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 77  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||||| ||| ||| ||||    
T  14954591 tctctcttcctttttctctctccattgttttttaccaattaaaaaagagaaaaacaaggttgtcatcaaa 14954522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 33857307 - 33857400
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||||||| ||||| |||||| |||||  |||||| |||||||    
T  33857307 ttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 27307223 - 27307131
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| |||||||  |||||||||| |||||| |||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatcattgctctt 27307131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 28165208 - 28165315
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| ||||  ||| || ||| |||  ||| |||| |  |||||| ||| ||||||||||    
T  28165208 tctctcttcctttttctctctccattatttttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattat 28165307  T
Q  108 tgctcttt 115  Q
    | ||||||    
T  28165308 ttctcttt 28165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3299103 - 3298993
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| ||  || ||||||||||| ||||||||| |||||| ||     
T  3299103 ttatcctctctcttactttttctctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaatagatgtataat 3299004  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  3299003 tatcattgctc 3298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 6639470 - 6639416
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  6639470 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagag 6639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 6851597 - 6851559
Alignment:
Q  74 caaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  6851597 caaagttgtcattaaatggatgtacaaatatcattgctc 6851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 19913863 - 19913929
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcacc 74  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||||    
T  19913863 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacc 19913929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 26321689 - 26321620
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| ||||||||||| ||| ||||| |||||| |||| ||| ||||| ||||||||||||||||    
T  26321689 tctctcttcctttttctctctcaattgtttttaaccaatgaaaagaga-gaaaaaaaagttatcaccaaaa 26321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 34101073 - 34101131
Alignment:
Q  13 attcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 71  Q
    ||||| |||| |||||| ||||||||| |||||| |||||||||||||  |||||||||    
T  34101073 attcctttttttctctctattatttttgaccaataaaaatagaggaaatgaaagttatc 34101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 39133812 - 39133858
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 65  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  39133812 ttttctctctccattatttttaaccaataaaaaaagagaaaaacaaa 39133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 39744592 - 39744526
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||| |||||| | || ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  39744592 ttattttctctctacctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 39744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 4061983 - 4062032
Alignment:
Q  65 agttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||| |||||    
T  4061983 agttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctt 4062032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 6851640 - 6851591
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  6851640 ttttctctctcaattgtttttgaccaatcaaaagagagaaaaacaaagtt 6851591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 13104564 - 13104633
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 83  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  13104564 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 13104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 23880174 - 23880227
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  23880174 tctctcttcctttttctctctccatttttttttaccaatgaaaagagagaaaaa 23880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 32750083 - 32750152
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 83  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  32750083 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 32750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41353478 - 41353417
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 80  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||||||    
T  41353478 ttttctctctccattatttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaaatt 41353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 16051380 - 16051332
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| ||||    
T  16051380 tctctcttcctttttctctctctattatttttgaccaatcaaaaaagag 16051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 27540156 - 27540188
Alignment:
Q  82 tcattaaatggatgtacaaatattattgctctt 114  Q
    ||||||||||||||||||||||| |||||||||    
T  27540156 tcattaaatggatgtacaaatatcattgctctt 27540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31635802 - 31635742
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  31635802 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 31635742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 38572018 - 38572114
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||  || |||||||||||| | ||| |||||| | || |||| ||||||| ||| |||||||| |||| || || || ||||||||||||    
T  38572018 tctctattcatttctctctctccattgtctttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgttatcaattgaatgtacaaatat 38572114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 35485 - 35382
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| || || |||||||||||||||||| ||||||||||||| ||    
T  35485 tctctcttcctttttctctctccattatttttgaccaatcaaaagagaggaaaacaaaattttctccaaaattgtcattaaatagatgtacaaatatcat 35386  T
Q  108 tgct 111  Q
    ||||    
T  35385 tgct 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33881704 - 33881585
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| |||||||| |  ||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  33881704 attatcctctctcttcctttttctctttttattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaaattatcattaaatgaatgtacaa 33881605  T
Q  101 atattattgctcttttcaat 120  Q
    |||| ||||||| |||||||    
T  33881604 atatcattgctcatttcaat 33881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 17157228 - 17157316
Alignment:
Q  24 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  17157228 tctctccattgtttttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaattgatgtacaaatatcattgctc 17157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 29609856 - 29609764
Alignment:
Q  22 tctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||| ||||||||||| || |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||    
T  29609856 tctctcttcattattttttgacaaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaattgatgtacaaatatcattgctct 29609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 26041389 - 26041493
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||| |||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| |||||||||||||||||| ||    
T  26041389 tctctcttcctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcat 26041488  T
Q  108 tgctc 112  Q
    |||||    
T  26041489 tgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 27164835 - 27164725
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||| | |||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  ||||||||||||||    
T  27164835 ttatcctctctcttcctttttctttttccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaa 27164736  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  27164735 tatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 30864415 - 30864305
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  30864415 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 30864316  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  30864315 tatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 10014936 - 10014851
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||| || |||||||| ||||||| || |||||||||||||||    
T  10014936 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatat 10014851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 25614802 - 25614717
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||| ||| |||||||||||||||| || | |||||||||||||    
T  25614802 ttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatat 25614717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 42060747 - 42060832
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||| |||||||||| ||||| ||||||||||| |||| ||  ||||||| |||||||| |||||||||||| |||||||||||||    
T  42060747 ttttttctctccattgtttttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaatagatgtacaaatat 42060832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 39369381 - 39369485
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| ||    
T  39369381 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcat 39369480  T
Q  108 tgctc 112  Q
    |||||    
T  39369481 tgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5900959 - 5901069
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | |||||||||||||||||||||||| ||| | || |||| |||| ||  ||||||| ||| ||||||| |||| ||||||||||    
T  5900959 ttatcatctctctttctttttctctctccattattttttactaataacaaaagagaaaaataagattatcactaaagttgtcatgaaattgatgtacaaa 5901058  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  5901059 tatcattgctc 5901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 33050256 - 33050366
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| |||||||||||||||    
T  33050256 ttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 33050355  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  33050356 tatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 38978565 - 38978678
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| ||| |||||||||||    
T  38978565 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaa 38978663  T
Q  102 tattattgctctttt 116  Q
    ||| |||||||||||    
T  38978664 tatcattgctctttt 38978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 42431796 - 42431898
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  42431796 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 42431895  T
Q  102 tat 104  Q
    |||    
T  42431896 tat 42431898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 44511218 - 44511324
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||| |||| ||||| ||||| |||||| | || |||| |||||||| || |||| ||| ||||||| |||||||||||||||||| ||    
T  44511218 tctctcttcctttttttctccccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatggatgtacaaatatcat 44511317  T
Q  108 tgctctt 114  Q
    |||||||    
T  44511318 tgctctt 44511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 116704 - 116814
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||||| ||| |||  ||||||||||||||| ||||| || ||| |||| | || |||||||  || |||| ||| ||||||| |||||||||||||||    
T  116704 ttatcttttctcttcatttttctctctccattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaa 116803  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  116804 tatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 30402168 - 30402081
Alignment:
Q  23 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||||| |||| |||||||||||| |||| | ||  |||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||    
T  30402168 ctctcttcattgttttttaccaataaaaagaaag--aaacaaagttgtcaccaaaattatcatgaaatagatgtacaaatatcattgctc 30402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 42476557 - 42476464
Alignment:
Q  11 ctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||| |||||||||||| || ||||| |||||| |||| |||  ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  42476557 ctattcctttttctctctccgttgtttttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 42476464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 2469771 - 2469819
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  2469771 tctctcttcctttttctctctccattattttttaccaatgaaaatagag 2469819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 23330002 - 23330090
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    |||||||| |||||||||||||||| |||| ||||  |||||| ||| |||||||||||  || |||||| || ||||||||| |||||||    
T  23330002 tctctctctattattttttaccaataaaaagagag--aaacaaggttgtcaccaaaatttccaataaatgaatatacaaatatcattgctc 23330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 29162277 - 29162166
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| | |||| |||| |||| |||||||  || |||| ||| |||||||  |||| |||||||||    
T  29162277 ttatcctctctctttctttttctctctccattgtttttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaa 29162178  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  29162177 tatcattgctct 29162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 20406635 - 20406725
Alignment:
Q  23 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||  |||||||| |||||| |||| |||  ||||||||||| || || || |||| ||||||||||||| ||||||| ||||||||    
T  20406635 ctctctctgttatttttgaccaataaaaagagaaaaaaacaaagttgtcgccgaagttgttattaaatggatgtccaaatatcattgctct 20406725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 3344955 - 3345044
Alignment:
Q  22 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 111  Q
    |||||||||||||||||| ||   | |||| |||  ||||||| ||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  3344955 tctctctccattatttttgacatgttaaaagagataaaaacaaggttgtcttcaaaattgtcattaaatgaatgtacaaatatcattgct 3345044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8742473 - 8742558
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||| | | |||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  8742473 ttttctctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8742558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 16645623 - 16645554
Alignment:
Q  43 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  16645623 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 16645554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 17619984 - 17619915
Alignment:
Q  43 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  17619984 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 17619915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 19880229 - 19880117
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatt-aaatggatgtacaa 100  Q
    ||||| ||||| |||| ||||||||||||||||||||  ||| || | || |||| |||| ||  || |||| ||| |||||||  ||||||||||||||    
T  19880229 ttatcctctctcttcctttttctctctccattattttg-acccataagaagagagaaaaataagattgtcactaaagttgtcatgcaaatggatgtacaa 19880131  T
Q  101 atattattgctctt 114  Q
    ||||||||||||||    
T  19880130 atattattgctctt 19880117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 37385214 - 37385129
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||| ||| ||||| |||||| | || |||| | ||||| ||| |||||||| ||||||| || |||||||||||||||    
T  37385214 ttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 37385129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 42640933 - 42640986
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  42640933 ttttctctctctattatttttgaccaatcaaaaaagagaaaatcaaagttatca 42640986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 47530272 - 47530187
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||| |||||||||| |||||  ||||| | || | || ||||||| |||||||||||| ||||||| |||| |||||||||||||    
T  47530272 ttttttctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatat 47530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 25332480 - 25332385
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||||||| ||||| |||||| ||||  ||||||||  |||||||||  ||| |||| |  |||||| ||| ||||||||||||||||||    
T  25332480 ttttctctctccattgtttttaaccaataaaaag-gaggaaaaagaagttatcaataaagttgttagcaaatggttgttcaaatattattgctcttt 25332385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 2347057 - 2346947
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||||||||||||  |||| |||||| | || | || |||| || ||| |||| ||| ||||||| ||||| |||||||||    
T  2347057 ttatcctctctcttcttttttctctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaa 2346958  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  2346957 tatcattgctc 2346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 19426659 - 19426728
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| |||||||||||||||||||||  ||||| |||| ||| ||||| |||||| |||||||||    
T  19426659 tctctcttcctttttctctctccattatttttatccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 19426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 22331203 - 22331129
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| | ||||| ||| || | ||||||||    
T  22331203 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 22331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 43255565 - 43255451
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||| |||||||||||||||| || ||| | || |||| |||  ||  || ||||||||||| |||| || | ||||||||||    
T  43255565 ttatcatctctcttcctttttttctctccattatttttgactaataagaagagagaaaagtaagattgtcaccaaaattatcatcaattagatgtacaaa 43255466  T
Q  102 tattattgctctttt 116  Q
    ||| ||| |||||||    
T  43255465 tatcattactctttt 43255451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 47424977 - 47424908
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| ||| || |||||||||    
T  47424977 tctctcttcctttttctctctccattgtttttaaccaataaaaagagaggaaaa-aaaattgtcaccaaaa 47424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 21037217 - 21037168
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||||||||||  |||| ||| |||||||||||| |||||||||||    
T  21037217 ttttctctctccattgattttgaccgatcaaaatagagaaaaacaaagtt 21037168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 21153142 - 21153191
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  21153142 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagtt 21153191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 30862715 - 30862768
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  30862715 tctctcttcctttttctctctccattatttttgaccaataaaaagagagaaaaa 30862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 30982346 - 30982293
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| |||||||| || |||||||||||||||| |||| |||||||||    
T  30982346 tctctcttcctttttctctttcaattattttttaccaataaaaagagaggaaaa 30982293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 36990120 - 36990173
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 61  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  36990120 tctctcttcctttttctctctccattatttttaaccaataaaaaaagagaaaaa 36990173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 44894455 - 44894371
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| |||||| || | |||||||||| |||||||    
T  44894455 ttttctctctccattgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatc-tcaaatggatgttcaaatat 44894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 34349019 - 34348971
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagag 56  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  34349019 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 34348971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 37325800 - 37325728
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 91  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||| |||| |||||    
T  37325800 ttttctctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatg 37325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 37392116 - 37392228
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  | ||| |||  ||| |||| |  |||||| ||| ||||    
T  37392116 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaa 37392215  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  37392216 tatcattgctctt 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 49189210 - 49189096
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| || | ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||    
T  49189210 attatcctctctctttctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaa 49189111  T
Q  101 atattattgctcttt 115  Q
    |||| |||| |||||    
T  49189110 atatcattgttcttt 49189096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 10385487 - 10385599
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| |||| ||| |||| || |||||||| || ||||||||||||||||||||    
T  10385487 ttatcctctctattcctttttctctctccattgtttttgaccaatcaaaaaagagaaaagcaaaattgtcaccaaagttatcattaaatggatgtacaaa 10385586  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  10385587 tatcattgctctt 10385599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 43196081 - 43195977
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| | | |||||||||||||||| |||||||||||| ||||||||||||||||    
T  43196081 tctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaatagatgtacaaatattat 43195982  T
Q  108 tgctc 112  Q
    |||||    
T  43195981 tgctc 43195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 5383832 - 5383943
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||| ||||| |||| |||||  |||||||||| |||| ||||||||||| |||||||| |||| ||||||||||||||||||    
T  5383832 ttatcctctctcttcctttttttctcttcattgtttttagccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatggatgtacaaa 5383931  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  5383932 tatcattgctct 5383943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37669470 - 37669582
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    |||||| ||||| |||| ||||  ||||| ||| ||||| ||||||||||| |||||| ||||||||| ||||| ||||| |||||||||| ||||||||    
T  37669470 attatcctctctcttcctttttgactctctattgtttttgaccaatcaaaaaagaggagaacaaagttgtcaccgaaattatcattaaatgaatgtacaa 37669569  T
Q  101 atattattgctct 113  Q
    |||| ||||||||    
T  37669570 atatcattgctct 37669582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 6829783 - 6829670
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||||||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||||||||||||    
T  6829783 ttatcatctctcttcctttttctctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaa 6829684  T
Q  102 tattattgctcttt 115  Q
    ||| ||||||||||    
T  6829683 tatcattgctcttt 6829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 19920852 - 19920949
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 116  Q
    |||||||||| |||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||| ||||||||||||  |||||| |||||||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctctttt 19920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2257693 - 2257617
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 77  Q
    ||||||||| || |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||| ||||    
T  2257693 attatcttcacttttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcatcaaa 2257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 13813631 - 13813743
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| ||  ||||||||||||||    
T  13813631 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaa 13813730  T
Q  102 tattattgctctt 114  Q
    ||| |||||||||    
T  13813731 tatcattgctctt 13813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 27578255 - 27578366
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | ||||||| ||||||| ||| | || |||||||||||  |||| |||||||||    
T  27578255 ttatcctctctctttctttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatgaatgtacaaa 27578354  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  27578355 tatcattgctct 27578366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 50035536 - 50035426
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| |||| |||||| |||| ||| ||||||| |||| ||||||||||    
T  50035536 ttatcatctctcttcctttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatagatgtacaaa 50035437  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  50035436 tatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 3291423 - 3291310
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||||||| |||||||||||| |||||  | || ||||  |||||| |||||||  |||||||||||  ||||||||||||||    
T  3291423 ttatcatctctcttcctttttctctttccattatttttgaccaaaaagaagagagagaaacaaggttatcattaaaattgtcatggaatggatgtacaaa 3291324  T
Q  102 tattattgctcttt 115  Q
    ||| ||| ||||||    
T  3291323 tatcattactcttt 3291310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 36669368 - 36669267
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||| ||||||    
T  36669368 ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatttacaaa 36669269  T
Q  102 ta 103  Q
    ||    
T  36669268 ta 36669267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 42843325 - 42843240
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| ||||||||||| |||| || |||||||||||||||    
T  42843325 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatat 42843240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 50777415 - 50777319
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| |||| |||||| ||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || |||||||||||||||    
T  50777415 tctctcttcctttttatctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatat 50777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 7371946 - 7371835
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| |||||  ||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||  ||| |||||||  |||||||||||| |    
T  7371946 ttatcctctctcctcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatggaatggatgtacata 7371847  T
Q  102 tattattgctct 113  Q
    ||| || |||||    
T  7371846 tatcatcgctct 7371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 9011718 - 9011820
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| || |||||||| |||||||||||||||    
T  9011718 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatggatgtacaaa 9011817  T
Q  102 tat 104  Q
    |||    
T  9011818 tat 9011820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 26501368 - 26501478
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| |||||||||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||  ||| |||||||  ||| ||||||||||    
T  26501368 ttatcctctctattcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatagatgtacaaa 26501467  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  26501468 tatcattgctc 26501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39669878 - 39669964
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta 87  Q
    |||||| |||||||| | ||||||||||||||| ||||  |||||| ||||||||| |||| |||||| ||| |||| |||||||||    
T  39669878 attatcatctctatttctttttctctctccattgttttcaaccaataaaaatagagaaaaataaagttgtcatcaaagttgtcatta 39669964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 50797853 - 50797955
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| |||| |||  |||||||  || |||||||| || |||| || | ||||||||||    
T  50797853 ttatcatctctcttcctttttctctctccattatttttgaccaataaaaagagataaaaacaagtttgtcaccaaagttatcatcaattagatgtacaaa 50797952  T
Q  102 tat 104  Q
    |||    
T  50797953 tat 50797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 10302324 - 10302271
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  10302324 ttttctctctctattattttttaccaatcaaaagagagaaaatcaaagttatca 10302271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 25130776 - 25130888
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||| |||| |||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| |||| ||||||||||    
T  25130776 ttatcctctctcttcctttttccctcttcattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaa 25130875  T
Q  102 tattattgctctt 114  Q
    ||| | |||||||    
T  25130876 tatcactgctctt 25130888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 27895752 - 27895649
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||| ||||  |||||| ||    
T  27895752 tctctcttcctttttctctctccatt-tttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcat 27895654  T
Q  108 tgctc 112  Q
    |||||    
T  27895653 tgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 25995533 - 25995647
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaa--atggatgtaca 99  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| || ||| |||  ||| ||||||| ||  || ||||||||    
T  25995533 ttatcctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatatagatgtaca 25995632  T
Q  100 aatattattgctctt 114  Q
    ||||| |||||||||    
T  25995633 aatatcattgctctt 25995647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 29362690 - 29362624
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||    
T  29362690 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 29362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 29489357 - 29489243
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || | || ||||||| ||| |||| ||| ||||||| ||||  |||||||||    
T  29489357 ttatcctctctcttcttttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatatatgtacaaa 29489258  T
Q  102 tattattgctctttt 116  Q
    ||| | |||||||||    
T  29489257 tatcactgctctttt 29489243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 8670162 - 8670215
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    ||||||||||| ||||||||| ||||||||||| | || |||||||||||||||    
T  8670162 ttttctctctctattatttttgaccaatcaaaagatagaaaaacaaagttatca 8670215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 51193114 - 51193029
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||||||||||||||  ||||| | || |||| ||||||| ||| |||  ||| ||||||| ||||||||||||| ||||    
T  51193114 ttttctctctccattatttttggccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatat 51193029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 24749669 - 24749629
Alignment:
Q  73 ccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  24749669 ccaaaattgttattaaatggatgtacaaatatcattgctct 24749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 27563617 - 27563657
Alignment:
Q  74 caaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  27563617 caaaattgtcattaaatggatgtacaaatatcattgttctt 27563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42615936 - 42615996
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||||| | ||||||||||| ||||||||| ||||||||||| | || |||||||||||    
T  42615936 tctctatttctttttctctctctattatttttgaccaatcaaaaaatagaaaaacaaagtt 42615996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 7078495 - 7078396
Alignment:
Q  5 tcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||| |||| ||| ||||||||||| ||||| |||||| | || ||||  |||||| ||| ||| |||| ||||| | ||||||||||||| ||||    
T  7078495 tcttctctcttccttttcctctctccattgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatat 7078396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 15061924 - 15061994
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 78  Q
    ||||| |||| ||||||||||||||| |||||  ||||| |||| |||| |||| |||||| |||||||||    
T  15061924 tctctcttcctttttctctctccattgtttttatccaataaaaagagagaaaaaaaaagttgtcaccaaaa 15061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 46902708 - 46902778
Alignment:
Q  35 ttttttaccaatcaaaatagaggaaaacaaa-gttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||||||| | || ||||||||| ||| ||| |||| ||||||||||| || |||||||||||||||    
T  46902708 ttttttaccaataagaagagaggaaaaaaaaagttgtcactaaaattgtcatcaattggatgtacaaatat 46902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 366748 - 366801
Alignment:
Q  20 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 73  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||||    
T  366748 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcac 366801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 4618725 - 4618786
Alignment:
Q  10 tctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 71  Q
    |||||||| |||| |||||||||||||||| |||||| |||| |||| | ||||| ||||||    
T  4618725 tctattcctttttttctctccattatttttgaccaatgaaaaaagagaacaacaaggttatc 4618786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 22389517 - 22389411
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||||| |||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||| |||  || |||||| ||| ||||||| ||    
T  22389517 tctctcttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg--atcaaatggttgttcaaatatcat 22389420  T
Q  108 tgctctttt 116  Q
    | |||||||    
T  22389419 tactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 26585171 - 26585122
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaa 51  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| ||||    
T  26585171 ttatcctctctcttcctttttctctctccattatttttgaccaataaaaa 26585122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 51704720 - 51704683
Alignment:
Q  79 ttgtcattaaatggatgtacaaatattattgctctttt 116  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  51704720 ttgtcattaaatggatatacaaatatcattgctctttt 51704683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3606060 - 3606024
Alignment:
Q  36 tttttaccaatcaaaatagaggaaaacaaagttatca 72  Q
    |||| |||||||||||||||| |||||||||||||||    
T  3606060 ttttgaccaatcaaaatagagaaaaacaaagttatca 3606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 8905801 - 8905869
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttat 70  Q
    |||| |||||| |||| |||||| |||| ||||||||| |||||||| |  |||| |||||||||||||    
T  8905801 ttattttctctcttcctttttctttctctattatttttgaccaatcatagaagagaaaaacaaagttat 8905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 25302638 - 25302562
Alignment:
Q  7 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 83  Q
    |||||| |||| ||||||||||| ||| ||||| |||||| |||| |||| |||| |||||| ||||  ||||||||    
T  25302638 ttctctcttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtc 25302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 35043712 - 35043608
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| |||| ||||  | ||| |||  |||||||| |  |||||| ||| ||||||| ||    
T  35043712 tctctcttcctttttatctctccattatttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcat 35043613  T
Q  108 tgctc 112  Q
    |||||    
T  35043612 tgctc 35043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 40610308 - 40610403
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  40610308 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 40610403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 43457811 - 43457716
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    ||||| |||| ||||||||||||||| ||||| | |||| |||| | || ||||||| ||| ||| |||| ||||| | ||||||||||||| ||||    
T  43457811 tctctcttcctttttctctctccattctttttgatcaat-aaaaaacagaaaaacaaggttgtcatcaaatttgtcttcaaatggatgtacatatat 43457716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 17065 - 17158
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 112  Q
    ||||||||||||||| ||||| |||||||| || ||||  |||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  17065 ttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 1488 - 1383
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  ||||||||||||||||| ||    
T  1488 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcat 1389  T
Q  108 tgctct 113  Q
    ||||||    
T  1388 tgctct 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 147254 - 147143
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  147254 ttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 147155  T
Q  102 tattattgctct 113  Q
    ||| ||||||||    
T  147154 tatcattgctct 147143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 31298 - 31188
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||| |||| |||||||||||||||| |||||| | || |||| ||||||||||| |||| |||||| ||||  ||| ||||||||||    
T  31298 ttatcctctctcttcctttttatctctccattatttttgaccaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatagatgtacaaa 31199  T
Q  102 tattattgctc 112  Q
    ||| |||||||    
T  31198 tatcattgctc 31188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 2496 - 2392
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| | ||||||||||||||||||| |||||| |||| |||| ||| |||  || ||||||||||| |||| || ||||||||||||||| ||    
T  2496 tctctcttccttcttctctctccattatttttgaccaataaaaagagagaaaatcaagattgtcaccaaaattatcatcaattggatgtacaaatatcat 2397  T
Q  108 tgctc 112  Q
    |||||    
T  2396 tgctc 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 249123 - 249028
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 114  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||||    
T  249123 ttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctt 249028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 29873 - 29969
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 115  Q
    ||||||||||||| | ||| | | |||| |||| |||| ||||||| ||| | || ||| |||||||||||||||||||||||||| |||| |||||    
T  29873 ttttctctctccaatgtttctgatcaataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgtacaaatatcattgatcttt 29969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 18674 - 18777
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 107  Q
    ||||| |||| ||||||||||||||| ||||| || ||| | ||||||| |||| || |||||||| ||| ||||| |  ||||||||||||||||| ||    
T  18674 tctctcttcctttttctctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgtc-tggaatggatgtacaaatatcat 18772  T
Q  108 tgctc 112  Q
    |||||    
T  18773 tgctc 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 24763 - 24857
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| |||||| |||| |||| |||||||||||||  |||||||    
T  24763 ttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctct 24857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 31592 - 31518
Alignment:
Q  8 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 82  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||| ||||||||    
T  31592 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 5152 - 5254
Alignment:
Q  2 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 101  Q
    ||||| ||||| |||  |||||||| |||||||||||| |||||| ||||  ||  ||| ||||||| ||||||||||||||| || || ||| ||||||    
T  5152 ttatcatctctcttcttttttctctttccattatttttaaccaataaaaagtgaaaaaatcaaagttgtcaccaaaattgtcactatatagatatacaaa 5251  T
Q  102 tat 104  Q
    |||    
T  5252 tat 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 88893 - 88994
Alignment:
Q  14 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 113  Q
    |||| ||||||||||||||| ||||| |||||| | || |||  |||| || ||| |||| ||| || |||| | |||||||||||||||| ||||||||    
T  88893 ttcctttttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatcattgctct 88992  T
Q  114 tt 115  Q
    ||    
T  88993 tt 88994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2225 - 2158
Alignment:
Q  1 attatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 68  Q
    |||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  2225 attatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 72152 - 72067
Alignment:
Q  19 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 104  Q
    |||||||| |||||||||||| |||||| | ||| ||| ||| ||| ||| |||||||| ||||||  | || |||||||||||||    
T  72152 ttttctctttccattatttttaaccaataagaattgagaaaaccaaggttgtcaccaaagttgtcaccatatagatgtacaaatat 72067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 3433 - 3545
Alignment:
Q  2 ttatcttctctattcccttttctctctccatt-attttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 100  Q
    ||||| ||||| |||| |||||| |||||||| |||||| |||||| | || | || |||| || ||| |||| ||| ||||| | ||||| ||||||||    
T  3433 ttatcctctctcttcctttttctttctccatttatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaa 3532  T
Q  101 atattattgctct 113  Q
    |||| ||||||||    
T  3533 atatcattgctct 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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