View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3069_low_64 (Length: 296)
Name: NF3069_low_64
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3069_low_64 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 89 - 292
Target Start/End: Complemental strand, 36888031 - 36887832
Alignment:
| Q |
89 |
gcaagaaacaacacattgtaattctacatttgcttctcaacttcgaaaaccaatgaaaacgcaaagaaaattcactgatgctatctctctgtgtattttt |
188 |
Q |
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| T |
36888031 |
gcaagaaactacacatggtaattctacatttgcttctcaacttcgaaaaccgatgaaaacgcaatgaaaattcacttatgctatttctctgtgta-tttt |
36887933 |
T |
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| Q |
189 |
caggaaaagaagaacaaagagtattgttaatagtttcttccaattctcagaaaaatgattcgtaacttcctttacctgcttctcaatctggttctctgct |
288 |
Q |
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||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
36887932 |
caggaaaagaagaacaaagagcattgttaatagt---ttccaattctcagaaaaatgattcgtaacttcctttacctgcttctcaatctggttctcttct |
36887836 |
T |
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