View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3069_low_97 (Length: 237)

Name: NF3069_low_97
Description: NF3069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3069_low_97
NF3069_low_97
[»] chr5 (51 HSPs)
chr5 (82-221)||(919105-919244)
chr5 (2-73)||(7940450-7940521)
chr5 (1-72)||(20142226-20142297)
chr5 (3-71)||(23286443-23286511)
chr5 (2-73)||(22527690-22527761)
chr5 (2-73)||(34662202-34662273)
chr5 (2-73)||(40004377-40004448)
chr5 (2-72)||(24857555-24857625)
chr5 (1-71)||(43060378-43060448)
chr5 (2-71)||(1265949-1266018)
chr5 (38-73)||(3028011-3028046)
chr5 (2-71)||(9828393-9828462)
chr5 (38-73)||(23260142-23260177)
chr5 (38-72)||(8949811-8949845)
chr5 (38-72)||(14435829-14435863)
chr5 (38-71)||(4976294-4976327)
chr5 (2-73)||(6673196-6673267)
chr5 (38-71)||(19571943-19571976)
chr5 (1-72)||(21239098-21239169)
chr5 (2-73)||(39971012-39971083)
chr5 (2-72)||(16127258-16127328)
chr5 (7-73)||(20186499-20186565)
chr5 (3-73)||(22657766-22657836)
chr5 (7-73)||(27873318-27873384)
chr5 (38-73)||(186362-186397)
chr5 (38-73)||(13759451-13759486)
chr5 (38-73)||(14913646-14913681)
chr5 (38-73)||(26894877-26894912)
chr5 (38-73)||(32964131-32964166)
chr5 (3-72)||(40643093-40643162)
chr5 (38-72)||(4194943-4194977)
chr5 (2-71)||(7951562-7951630)
chr5 (38-72)||(9020693-9020727)
chr5 (39-73)||(14436068-14436102)
chr5 (3-71)||(14619249-14619317)
chr5 (38-72)||(14649187-14649221)
chr5 (39-73)||(16440929-16440963)
chr5 (38-72)||(16926451-16926485)
chr5 (38-72)||(31657684-31657718)
chr5 (38-71)||(8283851-8283884)
chr5 (38-71)||(9268032-9268065)
chr5 (38-71)||(9828657-9828690)
chr5 (38-71)||(10734527-10734560)
chr5 (38-71)||(11780764-11780797)
chr5 (38-71)||(14570894-14570927)
chr5 (38-71)||(19571669-19571702)
chr5 (38-71)||(21069637-21069670)
chr5 (38-71)||(34332483-34332516)
chr5 (38-71)||(35547526-35547559)
chr5 (38-71)||(41687116-41687149)
chr5 (39-71)||(40738410-40738442)
[»] chr8 (57 HSPs)
chr8 (1-73)||(18111942-18112014)
chr8 (1-73)||(23487062-23487134)
chr8 (3-71)||(5162304-5162372)
chr8 (2-73)||(29321262-29321333)
chr8 (1-71)||(2944239-2944309)
chr8 (2-72)||(13153927-13153997)
chr8 (1-71)||(32522810-32522880)
chr8 (2-72)||(32675725-32675795)
chr8 (1-71)||(44888680-44888750)
chr8 (2-71)||(51063-51132)
chr8 (38-73)||(2152244-2152279)
chr8 (3-72)||(5774047-5774116)
chr8 (38-73)||(12802609-12802644)
chr8 (2-71)||(28192143-28192212)
chr8 (2-71)||(42885054-42885123)
chr8 (38-72)||(23688169-23688203)
chr8 (1-73)||(26016567-26016639)
chr8 (38-71)||(6050559-6050592)
chr8 (38-71)||(17069848-17069881)
chr8 (38-71)||(17578392-17578425)
chr8 (38-71)||(18641384-18641417)
chr8 (2-73)||(18754142-18754213)
chr8 (39-72)||(44580615-44580648)
chr8 (38-71)||(45283796-45283829)
chr8 (2-72)||(8251901-8251971)
chr8 (2-73)||(17856745-17856815)
chr8 (2-72)||(28579638-28579708)
chr8 (2-72)||(35179599-35179669)
chr8 (2-72)||(36408414-36408484)
chr8 (1-71)||(39029178-39029248)
chr8 (38-73)||(5162569-5162604)
chr8 (2-71)||(18455720-18455789)
chr8 (2-71)||(19176136-19176205)
chr8 (38-73)||(23487327-23487362)
chr8 (38-73)||(29279460-29279495)
chr8 (2-72)||(29806191-29806260)
chr8 (38-73)||(38781145-38781180)
chr8 (38-73)||(40530410-40530445)
chr8 (38-72)||(8797027-8797061)
chr8 (38-72)||(13568909-13568943)
chr8 (38-72)||(14584135-14584169)
chr8 (38-72)||(28572045-28572079)
chr8 (38-72)||(34568489-34568523)
chr8 (38-72)||(40784890-40784924)
chr8 (38-72)||(44250858-44250892)
chr8 (38-71)||(1774342-1774375)
chr8 (38-71)||(8073133-8073166)
chr8 (38-71)||(8951432-8951465)
chr8 (38-71)||(11482859-11482892)
chr8 (38-71)||(11798869-11798902)
chr8 (38-71)||(13154192-13154225)
chr8 (38-71)||(17336419-17336452)
chr8 (38-71)||(23687905-23687938)
chr8 (38-71)||(32522584-32522617)
chr8 (38-67)||(40785155-40785184)
chr8 (38-71)||(41898500-41898533)
chr8 (38-71)||(43653943-43653976)
[»] chr6 (41 HSPs)
chr6 (1-73)||(402588-402660)
chr6 (3-72)||(13321295-13321364)
chr6 (3-72)||(25045612-25045681)
chr6 (1-73)||(31150213-31150285)
chr6 (1-72)||(34915510-34915581)
chr6 (1-71)||(31091445-31091515)
chr6 (2-71)||(9038642-9038711)
chr6 (38-73)||(23604458-23604493)
chr6 (2-71)||(34301800-34301869)
chr6 (38-72)||(13901640-13901674)
chr6 (38-72)||(15498628-15498662)
chr6 (38-72)||(16122518-16122552)
chr6 (38-71)||(2090658-2090691)
chr6 (38-71)||(13866593-13866626)
chr6 (2-73)||(30248645-30248716)
chr6 (3-73)||(9341836-9341906)
chr6 (38-73)||(4844398-4844433)
chr6 (3-72)||(7772175-7772244)
chr6 (38-73)||(22999049-22999084)
chr6 (2-71)||(23398107-23398176)
chr6 (38-73)||(23789320-23789355)
chr6 (38-73)||(27581385-27581420)
chr6 (38-73)||(31149985-31150020)
chr6 (38-73)||(34741730-34741765)
chr6 (38-72)||(7847312-7847346)
chr6 (2-71)||(8743188-8743256)
chr6 (38-72)||(11200593-11200627)
chr6 (38-72)||(13866858-13866892)
chr6 (38-72)||(15498892-15498926)
chr6 (38-72)||(16272972-16273006)
chr6 (38-68)||(17227531-17227561)
chr6 (38-71)||(231109-231142)
chr6 (38-71)||(7772441-7772474)
chr6 (38-71)||(9388529-9388562)
chr6 (38-71)||(11847836-11847869)
chr6 (39-72)||(12144043-12144076)
chr6 (38-71)||(23282809-23282842)
chr6 (38-71)||(25045382-25045415)
chr6 (38-71)||(32614989-32615022)
chr6 (38-71)||(34915282-34915315)
chr6 (39-71)||(22852336-22852368)
[»] chr4 (77 HSPs)
chr4 (1-73)||(4415963-4416035)
chr4 (3-71)||(29520133-29520201)
chr4 (2-73)||(4035823-4035894)
chr4 (2-73)||(18872715-18872786)
chr4 (1-73)||(20455149-20455220)
chr4 (2-73)||(46949990-46950061)
chr4 (1-71)||(13620821-13620891)
chr4 (1-71)||(17339078-17339148)
chr4 (1-71)||(26625969-26626039)
chr4 (2-72)||(28501354-28501424)
chr4 (3-73)||(41191597-41191667)
chr4 (1-71)||(49373660-49373730)
chr4 (2-71)||(5375525-5375594)
chr4 (2-71)||(5743627-5743696)
chr4 (2-71)||(13548980-13549049)
chr4 (38-73)||(32899222-32899257)
chr4 (2-71)||(34273187-34273256)
chr4 (2-71)||(37173833-37173902)
chr4 (2-71)||(43387961-43388030)
chr4 (2-71)||(47806860-47806929)
chr4 (39-73)||(21265218-21265252)
chr4 (39-73)||(30523762-30523796)
chr4 (3-71)||(31937076-31937144)
chr4 (38-72)||(49793090-49793124)
chr4 (38-72)||(56432517-56432551)
chr4 (38-71)||(7698473-7698506)
chr4 (38-71)||(25124250-25124283)
chr4 (38-71)||(39670990-39671023)
chr4 (2-73)||(39797432-39797503)
chr4 (38-71)||(53564360-53564393)
chr4 (38-71)||(55563131-55563164)
chr4 (1-71)||(26866830-26866900)
chr4 (40-72)||(29508597-29508629)
chr4 (2-72)||(30050052-30050122)
chr4 (2-72)||(45742774-45742844)
chr4 (3-72)||(375423-375492)
chr4 (1-71)||(625934-626003)
chr4 (38-73)||(3085443-3085478)
chr4 (2-71)||(9328208-9328277)
chr4 (3-72)||(28298340-28298409)
chr4 (38-73)||(32898976-32899011)
chr4 (2-71)||(35675888-35675957)
chr4 (2-71)||(36130058-36130127)
chr4 (2-71)||(44294789-44294858)
chr4 (2-71)||(52977982-52978051)
chr4 (38-73)||(55562863-55562898)
chr4 (39-73)||(11469243-11469277)
chr4 (39-73)||(11522184-11522218)
chr4 (38-72)||(20747434-20747468)
chr4 (38-72)||(26889903-26889937)
chr4 (38-68)||(41620517-41620547)
chr4 (38-72)||(42528597-42528631)
chr4 (38-71)||(4036089-4036122)
chr4 (38-71)||(4549629-4549662)
chr4 (38-71)||(20391441-20391474)
chr4 (38-71)||(23777806-23777839)
chr4 (38-71)||(29014064-29014097)
chr4 (38-71)||(29460444-29460477)
chr4 (38-71)||(30771528-30771561)
chr4 (38-71)||(30868805-30868838)
chr4 (38-71)||(31937341-31937374)
chr4 (38-71)||(32032997-32033030)
chr4 (38-71)||(33413518-33413551)
chr4 (38-71)||(36901114-36901147)
chr4 (38-71)||(37518004-37518037)
chr4 (38-71)||(37522220-37522253)
chr4 (38-71)||(37776741-37776774)
chr4 (38-71)||(37780217-37780250)
chr4 (38-71)||(39114891-39114924)
chr4 (38-71)||(41191275-41191308)
chr4 (38-71)||(47228732-47228765)
chr4 (39-72)||(54877754-54877787)
chr4 (38-71)||(54878019-54878052)
chr4 (38-71)||(55631999-55632032)
chr4 (40-72)||(5734648-5734680)
chr4 (39-71)||(14794027-14794059)
chr4 (39-71)||(53277190-53277222)
[»] chr2 (61 HSPs)
chr2 (1-73)||(31751067-31751139)
chr2 (1-72)||(12890175-12890246)
chr2 (1-71)||(8912841-8912911)
chr2 (2-72)||(34883816-34883886)
chr2 (2-72)||(40607701-40607771)
chr2 (1-71)||(40789055-40789125)
chr2 (2-71)||(2438225-2438294)
chr2 (2-71)||(3095299-3095368)
chr2 (2-71)||(27560206-27560275)
chr2 (38-73)||(41422510-41422545)
chr2 (39-73)||(2199976-2200010)
chr2 (39-73)||(23083513-23083547)
chr2 (38-72)||(26322297-26322331)
chr2 (38-72)||(41494626-41494660)
chr2 (38-71)||(2060316-2060349)
chr2 (38-71)||(2200244-2200277)
chr2 (38-71)||(7116303-7116336)
chr2 (38-71)||(18374708-18374741)
chr2 (2-73)||(20252208-20252279)
chr2 (38-71)||(24345682-24345715)
chr2 (38-71)||(28566151-28566184)
chr2 (2-73)||(34062633-34062704)
chr2 (2-73)||(41450514-41450585)
chr2 (2-72)||(9701069-9701139)
chr2 (39-71)||(13215825-13215857)
chr2 (2-72)||(34432168-34432238)
chr2 (38-73)||(6027616-6027651)
chr2 (2-71)||(8716860-8716929)
chr2 (38-73)||(16108213-16108248)
chr2 (2-71)||(17408262-17408331)
chr2 (40-71)||(24345417-24345448)
chr2 (38-73)||(30857936-30857971)
chr2 (2-71)||(36750852-36750921)
chr2 (38-73)||(39833737-39833772)
chr2 (38-72)||(11201682-11201716)
chr2 (38-72)||(11865293-11865327)
chr2 (38-72)||(29830758-29830792)
chr2 (38-72)||(44573886-44573920)
chr2 (38-71)||(2060581-2060614)
chr2 (38-71)||(2438489-2438522)
chr2 (38-71)||(7491844-7491877)
chr2 (38-71)||(7492108-7492141)
chr2 (38-71)||(10399466-10399499)
chr2 (38-71)||(11852189-11852222)
chr2 (38-71)||(11865026-11865059)
chr2 (38-71)||(12889949-12889982)
chr2 (38-71)||(13598522-13598555)
chr2 (39-72)||(18374428-18374461)
chr2 (38-71)||(18970733-18970766)
chr2 (39-72)||(22182929-22182962)
chr2 (38-71)||(22897655-22897688)
chr2 (38-71)||(23465398-23465431)
chr2 (38-71)||(26334849-26334882)
chr2 (38-71)||(34113790-34113823)
chr2 (38-71)||(36131032-36131065)
chr2 (38-71)||(40680404-40680437)
chr2 (38-71)||(44436825-44436858)
chr2 (38-71)||(45474351-45474384)
chr2 (39-71)||(1142997-1143029)
chr2 (39-71)||(12872986-12873018)
chr2 (38-66)||(42629376-42629404)
[»] chr1 (75 HSPs)
chr1 (1-73)||(9413292-9413364)
chr1 (1-71)||(21631074-21631144)
chr1 (1-73)||(4102681-4102753)
chr1 (1-72)||(6089734-6089805)
chr1 (1-72)||(7763716-7763787)
chr1 (1-73)||(25509207-25509278)
chr1 (2-73)||(52431142-52431213)
chr1 (2-72)||(11741396-11741466)
chr1 (2-72)||(17483732-17483802)
chr1 (1-71)||(34931079-34931149)
chr1 (2-72)||(37951917-37951987)
chr1 (2-72)||(39497432-39497502)
chr1 (2-72)||(45039411-45039481)
chr1 (2-71)||(1039349-1039418)
chr1 (2-71)||(1046255-1046324)
chr1 (2-71)||(8472049-8472118)
chr1 (2-71)||(15811200-15811269)
chr1 (2-71)||(23541979-23542048)
chr1 (7-72)||(27037268-27037333)
chr1 (38-73)||(28885840-28885875)
chr1 (2-71)||(29437822-29437891)
chr1 (2-71)||(36694854-36694923)
chr1 (2-71)||(36710955-36711024)
chr1 (2-71)||(49907021-49907090)
chr1 (38-72)||(5765994-5766028)
chr1 (38-72)||(42276165-42276199)
chr1 (3-71)||(48067864-48067932)
chr1 (1-73)||(52601989-52602061)
chr1 (38-71)||(4280130-4280163)
chr1 (38-71)||(25227304-25227337)
chr1 (38-71)||(27037534-27037567)
chr1 (3-66)||(30289831-30289894)
chr1 (38-71)||(38613740-38613773)
chr1 (38-71)||(41317593-41317626)
chr1 (38-71)||(43456625-43456658)
chr1 (1-72)||(1767829-1767898)
chr1 (38-73)||(1047990-1048025)
chr1 (2-72)||(11353032-11353100)
chr1 (38-73)||(22567064-22567099)
chr1 (38-73)||(28886108-28886143)
chr1 (2-71)||(30290265-30290334)
chr1 (38-73)||(39362932-39362967)
chr1 (2-71)||(39363162-39363231)
chr1 (38-73)||(39750119-39750154)
chr1 (2-71)||(44649629-44649698)
chr1 (2-71)||(46075835-46075904)
chr1 (38-72)||(9202244-9202278)
chr1 (38-72)||(18237093-18237127)
chr1 (2-71)||(21290122-21290190)
chr1 (38-72)||(23530541-23530575)
chr1 (42-72)||(25283870-25283900)
chr1 (38-72)||(35693329-35693363)
chr1 (3-71)||(38261340-38261408)
chr1 (38-72)||(38920238-38920272)
chr1 (38-72)||(50937778-50937812)
chr1 (38-71)||(943641-943674)
chr1 (39-72)||(2279952-2279985)
chr1 (38-71)||(3934606-3934639)
chr1 (38-71)||(5765730-5765763)
chr1 (38-71)||(6089998-6090031)
chr1 (38-71)||(9715625-9715658)
chr1 (39-72)||(12814525-12814558)
chr1 (38-71)||(15892567-15892600)
chr1 (38-71)||(23530810-23530843)
chr1 (38-71)||(23542243-23542276)
chr1 (38-71)||(28888162-28888195)
chr1 (38-71)||(39497697-39497730)
chr1 (38-71)||(44646535-44646568)
chr1 (38-71)||(44649893-44649926)
chr1 (38-71)||(45039676-45039709)
chr1 (39-72)||(45943978-45944011)
chr1 (39-71)||(6129918-6129950)
chr1 (38-66)||(13343778-13343806)
chr1 (45-73)||(38613479-38613507)
chr1 (39-71)||(47296550-47296582)
[»] chr3 (96 HSPs)
chr3 (1-72)||(10015756-10015827)
chr3 (1-71)||(8321925-8321995)
chr3 (1-71)||(15996740-15996810)
chr3 (3-72)||(46845461-46845530)
chr3 (1-72)||(7181349-7181420)
chr3 (1-71)||(20621651-20621721)
chr3 (2-72)||(22103897-22103967)
chr3 (2-72)||(25149090-25149160)
chr3 (2-72)||(30819877-30819947)
chr3 (2-72)||(35868051-35868121)
chr3 (2-72)||(37728712-37728782)
chr3 (2-72)||(44543781-44543851)
chr3 (2-71)||(4024052-4024121)
chr3 (2-71)||(9499465-9499534)
chr3 (3-72)||(10656690-10656759)
chr3 (3-72)||(19897805-19897874)
chr3 (38-73)||(28875255-28875290)
chr3 (2-71)||(47008470-47008539)
chr3 (38-72)||(4759355-4759389)
chr3 (3-71)||(14428610-14428678)
chr3 (1-73)||(14758836-14758908)
chr3 (38-72)||(24087339-24087373)
chr3 (38-72)||(41392884-41392918)
chr3 (38-72)||(42801520-42801554)
chr3 (2-66)||(46703032-46703096)
chr3 (5-73)||(50433360-50433428)
chr3 (38-71)||(4759088-4759121)
chr3 (39-72)||(12906418-12906451)
chr3 (2-73)||(32969193-32969264)
chr3 (2-73)||(43868101-43868172)
chr3 (38-71)||(45513641-45513674)
chr3 (39-72)||(48904268-48904301)
chr3 (1-71)||(9582243-9582313)
chr3 (1-71)||(47066934-47067004)
chr3 (38-73)||(6784727-6784762)
chr3 (2-71)||(15095198-15095267)
chr3 (38-73)||(17589880-17589915)
chr3 (38-69)||(20918221-20918252)
chr3 (38-69)||(20927183-20927214)
chr3 (2-71)||(26058546-26058615)
chr3 (3-72)||(28673263-28673332)
chr3 (38-73)||(29454790-29454825)
chr3 (2-71)||(45252773-45252842)
chr3 (38-73)||(45404373-45404408)
chr3 (38-73)||(52177798-52177833)
chr3 (38-72)||(1111652-1111686)
chr3 (2-70)||(1572332-1572400)
chr3 (7-71)||(6784463-6784527)
chr3 (38-72)||(8547169-8547203)
chr3 (38-72)||(12050396-12050430)
chr3 (38-72)||(14428873-14428907)
chr3 (38-72)||(17699035-17699069)
chr3 (38-72)||(20621424-20621458)
chr3 (38-72)||(20862461-20862495)
chr3 (3-71)||(21756486-21756554)
chr3 (38-72)||(24813601-24813635)
chr3 (38-72)||(26806114-26806148)
chr3 (38-72)||(27687985-27688019)
chr3 (38-72)||(33868712-33868746)
chr3 (38-68)||(44542477-44542507)
chr3 (42-72)||(48902716-48902746)
chr3 (38-72)||(48909871-48909905)
chr3 (2-71)||(49383344-49383412)
chr3 (38-72)||(50647683-50647717)
chr3 (38-72)||(51284066-51284100)
chr3 (38-71)||(4024315-4024348)
chr3 (38-71)||(4564237-4564270)
chr3 (38-71)||(8503509-8503542)
chr3 (38-71)||(9779979-9780012)
chr3 (38-71)||(10015530-10015563)
chr3 (38-71)||(10045104-10045137)
chr3 (38-71)||(10220933-10220966)
chr3 (38-71)||(10656956-10656989)
chr3 (38-71)||(16434977-16435010)
chr3 (38-71)||(19897577-19897610)
chr3 (38-71)||(21458982-21459015)
chr3 (38-71)||(26593769-26593802)
chr3 (38-71)||(27646310-27646343)
chr3 (38-71)||(28673035-28673068)
chr3 (38-71)||(29719714-29719747)
chr3 (38-71)||(31531415-31531448)
chr3 (38-71)||(33212397-33212430)
chr3 (38-71)||(33360885-33360918)
chr3 (38-71)||(36005768-36005801)
chr3 (39-72)||(43978159-43978192)
chr3 (38-71)||(46049990-46050023)
chr3 (38-71)||(46845231-46845264)
chr3 (38-71)||(49543677-49543710)
chr3 (38-71)||(50433128-50433161)
chr3 (38-71)||(50517526-50517559)
chr3 (38-71)||(52058985-52059018)
chr3 (38-71)||(53164163-53164196)
chr3 (38-71)||(54866537-54866570)
chr3 (39-71)||(1327604-1327636)
chr3 (40-72)||(18658429-18658461)
chr3 (39-71)||(42044257-42044289)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-72)||(164213-164284)
[»] chr7 (57 HSPs)
chr7 (2-73)||(38858296-38858367)
chr7 (1-72)||(33381541-33381611)
chr7 (2-72)||(39871581-39871651)
chr7 (38-73)||(2290020-2290055)
chr7 (2-71)||(9682602-9682671)
chr7 (2-71)||(21295151-21295220)
chr7 (38-73)||(27813494-27813529)
chr7 (2-71)||(31457997-31458066)
chr7 (1-71)||(32118131-32118200)
chr7 (2-71)||(40300230-40300299)
chr7 (2-71)||(41252329-41252398)
chr7 (38-72)||(34012521-34012555)
chr7 (39-72)||(1574718-1574751)
chr7 (2-73)||(29286005-29286076)
chr7 (38-71)||(31581677-31581710)
chr7 (39-72)||(42541864-42541897)
chr7 (1-71)||(19920563-19920633)
chr7 (2-72)||(32814432-32814502)
chr7 (38-73)||(7400127-7400162)
chr7 (2-71)||(19845637-19845706)
chr7 (38-73)||(20075111-20075146)
chr7 (38-73)||(28060981-28061016)
chr7 (2-71)||(30534705-30534774)
chr7 (2-71)||(32872343-32872412)
chr7 (7-72)||(33858839-33858904)
chr7 (38-73)||(35888310-35888345)
chr7 (38-73)||(36698135-36698170)
chr7 (2-71)||(41026064-41026133)
chr7 (38-73)||(46415009-46415044)
chr7 (2-71)||(49045088-49045157)
chr7 (38-72)||(7607636-7607670)
chr7 (38-72)||(9140537-9140571)
chr7 (38-72)||(12616387-12616421)
chr7 (38-72)||(12930317-12930351)
chr7 (38-72)||(22991748-22991782)
chr7 (38-68)||(31769336-31769366)
chr7 (38-72)||(39135094-39135128)
chr7 (44-73)||(6799556-6799585)
chr7 (38-71)||(18751986-18752019)
chr7 (38-71)||(19292839-19292872)
chr7 (38-71)||(21119557-21119590)
chr7 (39-68)||(21135279-21135308)
chr7 (38-71)||(26255096-26255129)
chr7 (38-71)||(26299316-26299349)
chr7 (38-71)||(26736751-26736784)
chr7 (38-71)||(27529229-27529262)
chr7 (38-71)||(28016549-28016582)
chr7 (38-71)||(32117773-32117806)
chr7 (38-71)||(32643761-32643794)
chr7 (38-71)||(32759556-32759589)
chr7 (38-71)||(33381358-33381391)
chr7 (38-71)||(35569655-35569688)
chr7 (38-71)||(38428411-38428444)
chr7 (38-71)||(39197718-39197751)
chr7 (38-71)||(41444467-41444500)
chr7 (38-71)||(43093413-43093446)
chr7 (38-71)||(48521029-48521062)
[»] scaffold0237 (2 HSPs)
scaffold0237 (1-72)||(6577-6647)
scaffold0237 (38-72)||(6350-6384)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-72)||(246455-246525)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-71)||(3438-3507)
[»] scaffold0163 (1 HSPs)
scaffold0163 (38-72)||(1450-1484)
[»] scaffold0674 (1 HSPs)
scaffold0674 (38-71)||(5151-5184)
[»] scaffold0549 (1 HSPs)
scaffold0549 (38-71)||(10186-10219)
[»] scaffold0240 (2 HSPs)
scaffold0240 (38-71)||(18497-18530)
scaffold0240 (38-71)||(18760-18793)
[»] scaffold0107 (1 HSPs)
scaffold0107 (38-71)||(48654-48687)
[»] scaffold0029 (1 HSPs)
scaffold0029 (2-73)||(51650-51721)
[»] scaffold0012 (1 HSPs)
scaffold0012 (2-73)||(47638-47709)
[»] scaffold0122 (1 HSPs)
scaffold0122 (2-73)||(12063-12133)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-71)||(3750-3819)
[»] scaffold0011 (1 HSPs)
scaffold0011 (38-73)||(19696-19731)
[»] scaffold0002 (1 HSPs)
scaffold0002 (38-73)||(355335-355370)
[»] scaffold0250 (1 HSPs)
scaffold0250 (38-72)||(9430-9464)
[»] scaffold0008 (1 HSPs)
scaffold0008 (38-72)||(259126-259160)
[»] scaffold0339 (1 HSPs)
scaffold0339 (38-71)||(7144-7177)
[»] scaffold0025 (1 HSPs)
scaffold0025 (38-71)||(65378-65411)
[»] scaffold0005 (1 HSPs)
scaffold0005 (39-71)||(45672-45704)


Alignment Details
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 919105 - 919244
Alignment:
Q  82 acgaaaatactcctaattatttaaaatctttttactatgcaatccaaaataatttgatgagtatataatttataggaaacaaaaaatatatgatgagaat 181  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  919105 acgaaactactcctaattatttaaaatctttttattatgcaatccaaaataatttgatgagtatataatttataggaaaccaaaaatatatgatgagaag 919204  T
Q  182 ataaactaataaaatttaaaggtaccaccaccctcaattc 221  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  919205 ataaactaataaaatttaaaggtaccaccaccctcaattc 919244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 7940521 - 7940450
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  7940521 caaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtata 7940450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20142226 - 20142297
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  20142226 gcaaaggggtcttataaaaagggacaatttttttttccaaaagggtcttataattagggacggaggtagtat 20142297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 23286443 - 23286511
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  23286443 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 22527761 - 22527690
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  22527761 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 22527690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 34662273 - 34662202
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  34662273 caaaggggtcttataaaaagggacaaaaaaaactctcaaaagggtcttataattagggacggagggagtata 34662202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 40004377 - 40004448
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  40004377 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 40004448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 24857625 - 24857555
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  24857625 caaaggggtcttataaaaagggacaaattattttttcaaaagagtcttataattagggacggaggtagtat 24857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43060378 - 43060448
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  43060378 gcaaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 1266018 - 1265949
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  1266018 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 3028046 - 3028011
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  3028046 caaaagggtcttataattagggacggaggtagtata 3028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 9828462 - 9828393
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  9828462 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 23260142 - 23260177
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  23260142 caaaagggtcttataattagggacggaggtagtata 23260177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 8949845 - 8949811
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  8949845 caaaagggtcttataattagggacggaggtagtat 8949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 14435863 - 14435829
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  14435863 caaaagggtcttataattagggacggaggtagtat 14435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 4976294 - 4976327
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  4976294 caaaagggtcttataattagggacggaggtagta 4976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 6673196 - 6673267
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  6673196 caaagaggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 6673267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 19571943 - 19571976
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  19571943 caaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21239169 - 21239098
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||| |||||          |||||||||||| ||||||||||||||||||||||    
T  21239169 gcaaaggggtcttataaaaagagacaaaaaaaattctcaaaagggtcttctaattagggacggaggtagtat 21239098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 39971083 - 39971012
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          |||||| |||||||||||||||||||||||||||||    
T  39971083 caaagggatcttataaaaagggacaaattattttttcaaaagagtcttataattagggacggaggtagtata 39971012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 16127328 - 16127258
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  16127328 caaagaggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 16127258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 20186565 - 20186499
Alignment:
Q  7 gggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||          ||||||||||||||||||||||||||| ||||||||    
T  20186565 gggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggatgtagtata 20186499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 22657836 - 22657766
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||| ||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||    
T  22657836 aaagggatcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtata 22657766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 27873318 - 27873384
Alignment:
Q  7 gggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||    
T  27873318 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagatagtata 27873384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 186362 - 186397
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  186362 caaaagggtcttataattagggacggagggagtata 186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 13759451 - 13759486
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13759451 caaaagggtcttataattaggaacggaggtagtata 13759486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 14913681 - 14913646
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14913681 caaaagggtcttataattagggacggagggagtata 14913646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 26894877 - 26894912
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26894877 caaaagggtcttataattagggacggagggagtata 26894912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 32964166 - 32964131
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32964166 caaaatggtcttataattagggacggaggtagtata 32964131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 40643162 - 40643093
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||| ||||||          ||||||| |||||||||||||||||||||||||||    
T  40643162 aaaggggtcttataaaaaaggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtat 40643093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 4194943 - 4194977
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  4194943 caaaagggtcctataattagggacggaggtagtat 4194977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 7951630 - 7951562
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  7951630 caaaggggtcttataaaaagggacaaaaaaaatct-caaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 9020727 - 9020693
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  9020727 caaaagggtcttataattagggacggagggagtat 9020693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 14436068 - 14436102
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||| |||||||||||||||||||||||||    
T  14436068 aaaagggtcctataattagggacggaggtagtata 14436102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 14619317 - 14619249
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| |||||          ||||||||||||||||||||||||| ||||||||    
T  14619317 aaaggggtcttataaaaagagacaaaaaaaattctcaaaagggtcttataattagggacgaaggtagta 14619249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 14649221 - 14649187
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  14649221 caaaaggatcttataattagggacggaggtagtat 14649187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 16440963 - 16440929
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||| ||||||    
T  16440963 aaaagggtcttataattagggacggagggagtata 16440929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 16926485 - 16926451
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||| |||||||||||    
T  16926485 caaaagggtcttataattagggatggaggtagtat 16926451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 31657718 - 31657684
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||| |||||||    
T  31657718 caaaagggtcttataattagggacggatgtagtat 31657684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 8283884 - 8283851
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  8283884 caaaagggccttataattagggacggaggtagta 8283851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 9268065 - 9268032
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  9268065 caaaagggccttataattagggacggaggtagta 9268032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 10734527 - 10734560
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  10734527 caaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 11780797 - 11780764
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||| |||||||||||||||||    
T  11780797 caaaagggtcttataactagggacggaggtagta 11780764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 14570894 - 14570927
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  14570894 caaaaaggtcttataattagggacggaggtagta 14570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 19571702 - 19571669
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  19571702 caaaagggccttataattagggacggaggtagta 19571669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 21069670 - 21069637
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||    
T  21069670 caaaagggtcttataattagggacagaggtagta 21069637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 34332483 - 34332516
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  34332483 caaaatggtcttataattagggacggaggtagta 34332516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 35547526 - 35547559
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  35547526 caaaagggccttataattagggacggaggtagta 35547559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 41687116 - 41687149
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  41687116 caaaagggtcttataattatggacggaggtagta 41687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 40738442 - 40738410
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||||| ||||||||||||||||||||||||||    
T  40738442 aaaaggatcttataattagggacggaggtagta 40738410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18111942 - 18112014
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  18111942 gcaaaggggtcttataaaaagggacaatttttttttccaaaagggtcttataattagggacggaggtagtata 18112014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23487134 - 23487062
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  23487134 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtata 23487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 5162372 - 5162304
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  5162372 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 29321262 - 29321333
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||    
T  29321262 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggatggaggtagtata 29321333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2944239 - 2944309
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  2944239 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 13153997 - 13153927
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  13153997 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 13153927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32522810 - 32522880
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||    
T  32522810 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagcgacggaggtagta 32522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 32675725 - 32675795
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  32675725 caaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44888750 - 44888680
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  44888750 gcaaaggagtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagta 44888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 51063 - 51132
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  51063 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 2152244 - 2152279
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  2152244 caaaagggtcttataattagggacggaggtagtata 2152279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 5774116 - 5774047
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||    
T  5774116 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggaggtagtat 5774047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 12802644 - 12802609
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  12802644 caaaagggtcttataattagggacggaggtagtata 12802609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 28192143 - 28192212
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  28192143 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 42885123 - 42885054
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  42885123 caaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 23688169 - 23688203
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  23688169 caaaagggtcttataattagggacggaggtagtat 23688203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26016639 - 26016567
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  26016639 gcaaagcggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggagggagtata 26016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 6050559 - 6050592
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  6050559 caaaagggtcttataattagggacggaggtagta 6050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 17069848 - 17069881
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  17069848 caaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 17578425 - 17578392
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  17578425 caaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18641384 - 18641417
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  18641384 caaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 18754213 - 18754142
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  18754213 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 18754142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 44580648 - 44580615
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||||||||    
T  44580648 aaaagggtcttataattagggacggaggtagtat 44580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 45283796 - 45283829
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  45283796 caaaagggtcttataattagggacggaggtagta 45283829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 8251901 - 8251971
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  8251901 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 17856745 - 17856815
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  17856745 caaaggggtcttataaaaagggacaattttttttt-caaaagggtcttataattagggacggagggagtata 17856815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 28579708 - 28579638
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  28579708 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 28579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 35179669 - 35179599
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||| ||||||          |||||| ||||||||||||||||||||||||||||    
T  35179669 caaaggggtcttataaaaaaggacaaattattttttcaaaagagtcttataattagggacggaggtagtat 35179599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 36408484 - 36408414
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||| ||          ||||| |||||||||||||||||||||||||||||    
T  36408484 caaaggggtcttataaaaagggataaattattttttcaaaaaggtcttataattagggacggaggtagtat 36408414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39029248 - 39029178
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||| ||||    
T  39029248 gcaaaggggtcttataaaaaaggacaaaaaattttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 5162569 - 5162604
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||| |||||||||||||||||||||||||||    
T  5162569 caaaagggccttataattagggacggaggtagtata 5162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 18455789 - 18455720
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||    
T  18455789 caaaggggtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19176205 - 19176136
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  19176205 caaaagggtcttataaaaagggacaaaaaaattactcaaaagggtcttataattaaggacggaggtagta 19176136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 23487327 - 23487362
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||| |||||||||||||||||||||||||    
T  23487327 caaaagggtcctataattagggacggaggtagtata 23487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 29279460 - 29279495
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29279460 caaaagggtcttataattagggacggagggagtata 29279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 29806191 - 29806260
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||    
T  29806191 caaaggggtcttataaaaagggacaaaaaaattct-caaaagggttttataattagggacggaggtagtat 29806260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 38781145 - 38781180
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38781145 caaaagggtcttataattatggacggaggtagtata 38781180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 40530410 - 40530445
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40530410 caaaagggtcttataattagggacggagggagtata 40530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 8797061 - 8797027
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||| |||||||||||||    
T  8797061 caaaagggtcttataattaggaacggaggtagtat 8797027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 13568909 - 13568943
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||| |||||||||||||||    
T  13568909 caaaagggtcttataattaaggacggaggtagtat 13568943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 14584135 - 14584169
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||| |||||||||||||    
T  14584135 caaaagggtcttataattaggaacggaggtagtat 14584169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 28572079 - 28572045
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  28572079 caaaagggtcttataattagggacggagggagtat 28572045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 34568523 - 34568489
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  34568523 caaaagggtcttataattagggacggagggagtat 34568489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 40784924 - 40784890
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| |||||||||||||||||||||||||||||    
T  40784924 caaaaaggtcttataattagggacggaggtagtat 40784890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 44250892 - 44250858
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  44250892 caaaagggtcttataattagggacggagggagtat 44250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 1774375 - 1774342
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  1774375 caaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 8073133 - 8073166
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||| |||||||||||||||||    
T  8073133 caaaagggtcttataactagggacggaggtagta 8073166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 8951432 - 8951465
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  8951432 caaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 11482892 - 11482859
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||||||||||    
T  11482892 caaaagtgtcttataattagggacggaggtagta 11482859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 17336452 - 17336419
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  17336452 caaaagggtcttataattagggacggatgtagta 17336419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 23687938 - 23687905
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  23687938 caaaagggtcctataattagggacggaggtagta 23687905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 32522617 - 32522584
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  32522617 caaaagggtcctataattagggacggaggtagta 32522584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 40785155 - 40785184
Alignment:
Q  38 caaaagggtcttataattagggacggaggt 67  Q
    ||||||||||||||||||||||||||||||    
T  40785155 caaaagggtcttataattagggacggaggt 40785184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 41898500 - 41898533
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  41898500 caaaaggatcttataattagggacggaggtagta 41898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 402588 - 402660
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  402588 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtata 402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 13321295 - 13321364
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  13321295 aaaggggtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtat 13321364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 25045612 - 25045681
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  25045612 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 25045681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31150213 - 31150285
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          |||||||||||||||| |||||||||||||||||||    
T  31150213 gcaaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataaatagggacggaggtagtata 31150285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34915510 - 34915581
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  34915510 gcaaaggggacttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 34915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31091515 - 31091445
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  31091515 gcaaatgggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 9038711 - 9038642
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  9038711 caaaggggtcttataaaaagggacaaatgattttttcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 23604493 - 23604458
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  23604493 caaaagggtcttataattagggacggaggtagtata 23604458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 34301800 - 34301869
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  34301800 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 13901674 - 13901640
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  13901674 caaaagggtcttataattagggacggaggtagtat 13901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 15498662 - 15498628
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  15498662 caaaagggtcttataattagggacggaggtagtat 15498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 16122518 - 16122552
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  16122518 caaaagggtcttataattagggacggaggtagtat 16122552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 2090691 - 2090658
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  2090691 caaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 13866626 - 13866593
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  13866626 caaaagggtcttataattagggacggaggtagta 13866593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 30248716 - 30248645
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  30248716 caaatgggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 30248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 9341906 - 9341836
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||| ||||||          ||||||| ||||||||||||||||||||||||||||    
T  9341906 aaaggggtcttataaaaaaggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtata 9341836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 4844433 - 4844398
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4844433 caaaagggtcttataattagggacggagggagtata 4844398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 7772244 - 7772175
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||| ||||||          |||||| ||||||||||||||||||||||||||||    
T  7772244 aaaggggtcttataaaaatggacaaaaaaaattctcaaaagagtcttataattagggacggaggtagtat 7772175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 22999049 - 22999084
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||| |||||||||||||||||||    
T  22999049 caaaagggtcttataactagggacggaggtagtata 22999084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23398107 - 23398176
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||| ||||    
T  23398107 caaaggggtcttataaaaagggataaaaaaaatcctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 23789355 - 23789320
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||| |||||||||||||||||||    
T  23789355 caaaagggtcttataactagggacggaggtagtata 23789320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 27581420 - 27581385
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||| |||||||||||||||||    
T  27581420 caaaagggtcttataattggggacggaggtagtata 27581385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 31150020 - 31149985
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||| |||||||||||||||||||||||||    
T  31150020 caaaagggtcctataattagggacggaggtagtata 31149985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 34741730 - 34741765
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  34741730 caaaagggtcttataattagggacggagggagtata 34741765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 7847312 - 7847346
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||| |||||||||||||||||||    
T  7847312 caaaagggtcttatatttagggacggaggtagtat 7847346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 8743256 - 8743188
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  8743256 caaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 11200627 - 11200593
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  11200627 caaaaggctcttataattagggacggaggtagtat 11200593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 13866858 - 13866892
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  13866858 caaaagggtcctataattagggacggaggtagtat 13866892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 15498892 - 15498926
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  15498892 caaaagggtcctataattagggacggaggtagtat 15498926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 16272972 - 16273006
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  16272972 caaaagggtcttataattagggacggaggaagtat 16273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 17227531 - 17227561
Alignment:
Q  38 caaaagggtcttataattagggacggaggta 68  Q
    |||||||||||||||||||||||||||||||    
T  17227531 caaaagggtcttataattagggacggaggta 17227561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 231109 - 231142
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  231109 caaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 7772441 - 7772474
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  7772441 caaaagggccttataattagggacggaggtagta 7772474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 11847836 - 11847869
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  11847836 caaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 12144043 - 12144076
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| |||||    
T  12144043 aaaagggtcttataattagggacggagggagtat 12144076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 23282809 - 23282842
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||| ||||||||||||||||||    
T  23282809 caaaagggtcttatatttagggacggaggtagta 23282842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 25045415 - 25045382
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  25045415 caaaagggccttataattagggacggaggtagta 25045382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 32615022 - 32614989
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  32615022 caaaaggttcttataattagggacggaggtagta 32614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 34915315 - 34915282
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||| ||||||||    
T  34915315 caaaagggtcttataattagggacgaaggtagta 34915282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 22852336 - 22852368
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||| ||||||||||||||||||||||||||||    
T  22852336 aaaatggtcttataattagggacggaggtagta 22852368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4416035 - 4415963
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  4416035 gcaaaggggtcttataaaaagggacaaaaaacattctcaaaagggtcttataattagggacggaggtagtata 4415963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 29520133 - 29520201
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  29520133 aaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 4035894 - 4035823
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  4035894 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 4035823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 18872786 - 18872715
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  18872786 caaagggatcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtata 18872715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20455149 - 20455220
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  20455149 gcaaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggaggtagtata 20455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 46950061 - 46949990
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||| ||||          ||||||||||||||||||||||||||||||||||||    
T  46950061 caaaggggtcttataaaaaggaacaaaaaatattctcaaaagggtcttataattagggacggaggtagtata 46949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13620821 - 13620891
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||    
T  13620821 gcaaaggggtcttataaaaagggacaattttttttttcaaaaggatcttataattagggacggaggtagta 13620891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17339148 - 17339078
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||    
T  17339148 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagagacggaggtagta 17339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26625969 - 26626039
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  26625969 gcaaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 28501354 - 28501424
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| |||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  28501354 caaaagggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggaggtagtat 28501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 41191597 - 41191667
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||    
T  41191597 aaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagagacggaggtagtata 41191667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49373660 - 49373730
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||    
T  49373660 gcaaaggggtcttataaaaagggccaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 5375525 - 5375594
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  5375525 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 5743627 - 5743696
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  5743627 caaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13549049 - 13548980
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  13549049 caaaggggtcttataaaaagggacaaattattttttcaaaagagtcttataattagggacggaggtagta 13548980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 32899222 - 32899257
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  32899222 caaaagggtcttataattagggacggaggtagtata 32899257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 34273187 - 34273256
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  34273187 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 37173902 - 37173833
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||| ||||||||    
T  37173902 caaaggggtcttataaaaagggacaaaaaaaactctcaaaagggtcttataattagggacgaaggtagta 37173833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 43387961 - 43388030
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  43387961 caaaggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 47806929 - 47806860
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  47806929 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 21265252 - 21265218
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||||||||||    
T  21265252 aaaagggtcttataattagggacggaggtagtata 21265218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 30523796 - 30523762
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||||||||||    
T  30523796 aaaagggtcttataattagggacggaggtagtata 30523762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 31937144 - 31937076
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  31937144 aaagaggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 49793124 - 49793090
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  49793124 caaaagggtcttataattagggacggaggtagtat 49793090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 56432551 - 56432517
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  56432551 caaaagggtcttataattagggacggaggtagtat 56432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 7698473 - 7698506
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  7698473 caaaagggtcttataattagggacggaggtagta 7698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 25124250 - 25124283
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  25124250 caaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 39670990 - 39671023
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  39670990 caaaagggtcttataattagggacggaggtagta 39671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 39797503 - 39797432
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||| |||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||    
T  39797503 caaaagggtcttataaaaagggacaaatgattttttcaaaaaggtcttataattagggacggaggtagtata 39797432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 53564360 - 53564393
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  53564360 caaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 55563131 - 55563164
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  55563131 caaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26866830 - 26866900
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| |||||          ||||||||||||||||||| ||||||||||||||    
T  26866830 gcaaaggggtcttataaaaagagacaaaaaaaattctcaaaagggtcttataattaaggacggaggtagta 26866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 29508629 - 29508597
Alignment:
Q  40 aaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||    
T  29508629 aaagggtcttataattagggacggaggtagtat 29508597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 30050052 - 30050122
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||| |          |||||| ||||||||||||||||||||||||||||    
T  30050052 caaaggggtcttataaaaagggaccaaattttttttcaaaagagtcttataattagggacggaggtagtat 30050122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 45742774 - 45742844
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  45742774 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 45742844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 375492 - 375423
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||| ||||||||||||||||||          ||||||||||||||||||| |||||||||||||||    
T  375492 aaagggatcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattaaggacggaggtagtat 375423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 625934 - 626003
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||    
T  625934 gcaaaggggtcttataaaaagggacaattttttttc-caaaaaggtcttataattagggacggaggtagta 626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 3085478 - 3085443
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3085478 caaaaggatcttataattagggacggaggtagtata 3085443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9328208 - 9328277
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  9328208 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 28298340 - 28298409
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| ||||||||||||||||||||          ||||||| |||||||||||||||||||||||||||    
T  28298340 aaagaggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtat 28298409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 32899011 - 32898976
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||| |||||||||||||||||||||||||||    
T  32899011 caaaagggccttataattagggacggaggtagtata 32898976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 35675888 - 35675957
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  35675888 caaaggagtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 36130058 - 36130127
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||| ||||||||||||    
T  36130058 caaagggatcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattaggaacggaggtagta 36130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 44294858 - 44294789
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||| ||||    
T  44294858 caaaggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 52978051 - 52977982
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  52978051 caaaggagtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 55562898 - 55562863
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||| |||||||||||||||||||||||||||    
T  55562898 caaaagggccttataattagggacggaggtagtata 55562863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 11469243 - 11469277
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||| ||||||||||||||||||||||||||    
T  11469243 aaaagggttttataattagggacggaggtagtata 11469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 11522218 - 11522184
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||| ||||||||||||||||||||||||||    
T  11522218 aaaagggttttataattagggacggaggtagtata 11522184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 20747434 - 20747468
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  20747434 caaaagggtcttataattagggacggagggagtat 20747468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 26889903 - 26889937
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  26889903 caaaaggatcttataattagggacggaggtagtat 26889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 41620547 - 41620517
Alignment:
Q  38 caaaagggtcttataattagggacggaggta 68  Q
    |||||||||||||||||||||||||||||||    
T  41620547 caaaagggtcttataattagggacggaggta 41620517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 42528597 - 42528631
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||| ||||||||||||||||||    
T  42528597 caaaagggtcttataactagggacggaggtagtat 42528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 20391441 - 20391474
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  20391441 caaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 23777806 - 23777839
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||    
T  23777806 caaaagggtcttataattaggaacggaggtagta 23777839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 29460477 - 29460444
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  29460477 caaaagggccttataattagggacggaggtagta 29460444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 30771561 - 30771528
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  30771561 caaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 30868805 - 30868838
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  30868805 caaaagggtcttataattagggacggatgtagta 30868838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 31937341 - 31937374
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  31937341 caaaagggccttataattagggacggaggtagta 31937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 32032997 - 32033030
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  32032997 caaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 33413551 - 33413518
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  33413551 caaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 36901114 - 36901147
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  36901114 caaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 37518037 - 37518004
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||    
T  37518037 caaaagggtcttataattaggaacggaggtagta 37518004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 37522253 - 37522220
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||    
T  37522253 caaaagggtcttataattaggaacggaggtagta 37522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 37776741 - 37776774
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  37776741 caaaagggtcttataattaaggacggaggtagta 37776774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 37780217 - 37780250
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||| |||||||||||||||||    
T  37780217 caaaagggtcttataactagggacggaggtagta 37780250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 39114891 - 39114924
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  39114891 caaaaggatcttataattagggacggaggtagta 39114924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 41191308 - 41191275
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  41191308 caaaagggccttataattagggacggaggtagta 41191275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 47228732 - 47228765
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  47228732 caaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 54877787 - 54877754
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||| ||||||||||||||||||||||||    
T  54877787 aaaagggtcctataattagggacggaggtagtat 54877754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 54878019 - 54878052
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  54878019 caaaacggtcttataattagggacggaggtagta 54878052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 5734648 - 5734680
Alignment:
Q  40 aaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||    
T  5734648 aaagggtcttataattagggacgggggtagtat 5734680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 14794027 - 14794059
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| |||||||||||||    
T  14794027 aaaagggtcttataattagagacggaggtagta 14794059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 53277190 - 53277222
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||| ||||    
T  53277190 aaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31751139 - 31751067
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  31751139 gcaaaggggtcttataaaaagggacaaaaaaatttcacaaaagggtcttataattagggacggaggtagtata 31751067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12890175 - 12890246
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  12890175 gcaaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagtat 12890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8912841 - 8912911
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8912841 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 34883816 - 34883886
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  34883816 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 34883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 40607771 - 40607701
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  40607771 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40789055 - 40789125
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  40789055 gcaaaggggtcttataaaaagggacaattttttttttcaaaagagtcttataattagggacggaggtagta 40789125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 2438294 - 2438225
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  2438294 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 3095368 - 3095299
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  3095368 caaagaggtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 27560275 - 27560206
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  27560275 caaaggggtcttataaaaagggacaaaaatttttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 41422545 - 41422510
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  41422545 caaaagggtcttataattagggacggaggtagtata 41422510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 2200010 - 2199976
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||||||||||    
T  2200010 aaaagggtcttataattagggacggaggtagtata 2199976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 23083547 - 23083513
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||||||||||    
T  23083547 aaaagggtcttataattagggacggaggtagtata 23083513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 26322297 - 26322331
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  26322297 caaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 41494626 - 41494660
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  41494626 caaaagggtcttataattagggacggaggtagtat 41494660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 2060349 - 2060316
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  2060349 caaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 2200244 - 2200277
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  2200244 caaaagggtcttataattagggacggaggtagta 2200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 7116303 - 7116336
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  7116303 caaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18374708 - 18374741
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  18374708 caaaagggtcttataattagggacggaggtagta 18374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 20252279 - 20252208
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||| |||||          ||||||||||||||||||||||||||||| ||||||    
T  20252279 caaaggggtcttataaaaagtgacaaaagaaattctcaaaagggtcttataattagggacggagggagtata 20252208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 24345682 - 24345715
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  24345682 caaaagggtcttataattagggacggaggtagta 24345715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 28566184 - 28566151
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  28566184 caaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 34062633 - 34062704
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  34062633 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 34062704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 41450585 - 41450514
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  41450585 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 41450514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 9701139 - 9701069
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||    
T  9701139 caaaagggtcttataaaaagggacaaattattttttcaaaagggtcttataattaaggacggaggtagtat 9701069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 13215825 - 13215857
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||||||||    
T  13215825 aaaagggtcttataattagggacggaggtagta 13215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 34432168 - 34432238
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||           |||||||||||||||||||||| |||||||||||    
T  34432168 caaaggggtcttataaaaagggacaaattattttttaaaaagggtcttataattagggatggaggtagtat 34432238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 6027651 - 6027616
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||||||||||||    
T  6027651 caaaaggatcttataattagggacggaggtagtata 6027616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 8716860 - 8716929
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  8716860 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 8716929  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 16108248 - 16108213
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16108248 caaaagggtcttataattagggacggagggagtata 16108213  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 17408262 - 17408331
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  17408262 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 17408331  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Complemental strand, 24345448 - 24345417
Alignment:
Q  40 aaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||    
T  24345448 aaagggtcttataattagggacggaggtagta 24345417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 30857971 - 30857936
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||| |||||||||    
T  30857971 caaaagggtcttataattagggacgggggtagtata 30857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 36750852 - 36750921
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||| ||||||    
T  36750852 caaagaggtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaagtagta 36750921  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 39833772 - 39833737
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39833772 caaaagggtcttataattagggacggagggagtata 39833737  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 11201716 - 11201682
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  11201716 caaaagggtcttataattagggacggagggagtat 11201682  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 11865293 - 11865327
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||| ||||||||||||||||||||||||||||    
T  11865293 caaaagagtcttataattagggacggaggtagtat 11865327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 29830758 - 29830792
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| |||||||||||||||||||||||||||||    
T  29830758 caaaaaggtcttataattagggacggaggtagtat 29830792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 44573886 - 44573920
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||| |||||||||||||||    
T  44573886 caaaagggtcttataattaaggacggaggtagtat 44573920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 2060581 - 2060614
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  2060581 caaaagggtcctataattagggacggaggtagta 2060614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 7491877 - 7491844
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  7491877 caaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 10399466 - 10399499
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||| ||||||||||    
T  10399466 caaaagggtcttataattagggatggaggtagta 10399499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 11852189 - 11852222
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  11852189 caaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 11865059 - 11865026
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  11865059 caaaagggccttataattagggacggaggtagta 11865026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 12889982 - 12889949
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  12889982 caaaagggtcctataattagggacggaggtagta 12889949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 13598555 - 13598522
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||| ||||||||||||||||||    
T  13598555 caaaagggtcttatatttagggacggaggtagta 13598522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 18374461 - 18374428
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| ||||||||||||||||||||||||||    
T  18374461 aaaagggccttataattagggacggaggtagtat 18374428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18970733 - 18970766
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||    
T  18970733 caaaagggtcttataattagggacagaggtagta 18970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 22182929 - 22182962
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| |||||    
T  22182929 aaaagggtcttataattagggacggagggagtat 22182962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 23465398 - 23465431
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  23465398 caaaagggtcctataattagggacggaggtagta 23465431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 26334849 - 26334882
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||||||||||    
T  26334849 caaaagagtcttataattagggacggaggtagta 26334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 34113790 - 34113823
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  34113790 caaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 36131032 - 36131065
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  36131032 caaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 40680437 - 40680404
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  40680437 caaaagggtcctataattagggacggaggtagta 40680404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 44436825 - 44436858
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||| |||||||||||||||||||    
T  44436825 caaaagggtcttatcattagggacggaggtagta 44436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 1143029 - 1142997
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||||| ||||||||||||||||||||||||||    
T  1143029 aaaaggatcttataattagggacggaggtagta 1142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 12873018 - 12872986
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| |||||||||||||    
T  12873018 aaaagggtcttataattagagacggaggtagta 12872986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Complemental strand, 42629404 - 42629376
Alignment:
Q  38 caaaagggtcttataattagggacggagg 66  Q
    |||||||||||||||||||||||||||||    
T  42629404 caaaagggtcttataattagggacggagg 42629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9413292 - 9413364
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  9413292 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtata 9413364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21631074 - 21631144
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  21631074 gcaaaggggtcttataaaaagggacaatttgtttcttcaaaagggtcttataattagggacggaggtagta 21631144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4102681 - 4102753
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  4102681 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 4102753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6089805 - 6089734
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||    
T  6089805 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagagacggaggtagtat 6089734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7763716 - 7763787
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  7763716 gcaaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 7763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25509278 - 25509207
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  25509278 gcaaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggaggtagtata 25509207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 52431142 - 52431213
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  52431142 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 52431213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 11741466 - 11741396
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  11741466 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 11741396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 17483802 - 17483732
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||| |||||          |||||||||||||||||||||||||||||||||||    
T  17483802 caaaggggtcttataaaaagagacaaattattttttcaaaagggtcttataattagggacggaggtagtat 17483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34931149 - 34931079
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||    
T  34931149 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattaggaacggaggtagta 34931079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 37951917 - 37951987
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  37951917 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 37951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 39497502 - 39497432
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  39497502 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 39497432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 45039481 - 45039411
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  45039481 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 45039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 1039349 - 1039418
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  1039349 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 1046255 - 1046324
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  1046255 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 8472118 - 8472049
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||| ||||||    
T  8472118 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggaagtagta 8472049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 15811200 - 15811269
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  15811200 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 23542048 - 23541979
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  23542048 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 27037333 - 27037268
Alignment:
Q  7 gggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  27037333 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 28885875 - 28885840
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  28885875 caaaagggtcttataattagggacggaggtagtata 28885840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 29437822 - 29437891
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  29437822 caaaggggtcttataaaaagggacaaattattttttcaaaagagtcttataattagggacggaggtagta 29437891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 36694923 - 36694854
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  36694923 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 36711024 - 36710955
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  36711024 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 49907090 - 49907021
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  49907090 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 5765994 - 5766028
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  5765994 caaaagggtcttataattagggacggaggtagtat 5766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 42276165 - 42276199
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  42276165 caaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 48067864 - 48067932
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||    
T  48067864 aaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagagacggaggtagta 48067932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52602061 - 52601989
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||    
T  52602061 gcaaaggggtcttataaaaagggacaaaaaaaattcttaaaagggtcttataattagggacggagggagtata 52601989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 4280130 - 4280163
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  4280130 caaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 25227337 - 25227304
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  25227337 caaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 27037534 - 27037567
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  27037534 caaaagggtcttataattagggacggaggtagta 27037567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 30289831 - 30289894
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggagg 66  Q
    |||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  30289831 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagg 30289894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 38613740 - 38613773
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  38613740 caaaagggtcttataattagggacggaggtagta 38613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 41317626 - 41317593
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  41317626 caaaagggtcttataattagggacggaggtagta 41317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 43456625 - 43456658
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  43456625 caaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1767829 - 1767898
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||| |||||||||    
T  1767829 gcaaaggggtcttataaaaagggacaatttttttt--caaaagggtcttataattagggacgaaggtagtat 1767898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 1048025 - 1047990
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1048025 caaaagggtcttataattagggacggagggagtata 1047990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 11353032 - 11353100
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||    
T  11353032 caaaggggtcttataaaaagggacaaaaaaattt--caaaagggtcttataattaggaacggaggtagtat 11353100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 22567099 - 22567064
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22567099 caaaaggatcttataattagggacggaggtagtata 22567064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 28886108 - 28886143
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28886108 caaaatggtcttataattagggacggaggtagtata 28886143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 30290334 - 30290265
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  30290334 caaagaggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 39362967 - 39362932
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39362967 caaaagggtcttataattagggacggagggagtata 39362932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 39363162 - 39363231
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  39363162 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 39750154 - 39750119
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39750154 caaaagggtcttataattagggacggagggagtata 39750119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 44649698 - 44649629
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  44649698 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 46075835 - 46075904
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  46075835 caaaagggtcttataaaaagggacaaaaaatattctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 9202278 - 9202244
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  9202278 caaaagggtcttataattagggacggagggagtat 9202244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 18237127 - 18237093
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||| ||||||||||||||||||||||||||||    
T  18237127 caaaagagtcttataattagggacggaggtagtat 18237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 21290190 - 21290122
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||| ||||||    
T  21290190 caaaggggtcttataaaaagggacaatttttttct-caaaagggtcttataattagggacggaagtagta 21290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 23530575 - 23530541
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||| |||||||||||||||    
T  23530575 caaaagggtcttataattaaggacggaggtagtat 23530541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Complemental strand, 25283900 - 25283870
Alignment:
Q  42 agggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||    
T  25283900 agggtcttataattagggacggaggtagtat 25283870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 35693329 - 35693363
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  35693329 caaaagggtcctataattagggacggaggtagtat 35693363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 38261408 - 38261340
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| |||||||||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  38261408 aaaggagtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggaggtagta 38261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 38920272 - 38920238
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  38920272 caaaagggtcttataattagggacggagggagtat 38920238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 50937812 - 50937778
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| |||||||||||||||||||||||||||||    
T  50937812 caaaatggtcttataattagggacggaggtagtat 50937778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 943641 - 943674
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  943641 caaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 2279985 - 2279952
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| |||||    
T  2279985 aaaagggtcttataattagggacggaggaagtat 2279952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 3934639 - 3934606
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  3934639 caaaaggatcttataattagggacggaggtagta 3934606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 5765763 - 5765730
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  5765763 caaaagggtcatataattagggacggaggtagta 5765730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 6089998 - 6090031
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  6089998 caaaagggtcctataattagggacggaggtagta 6090031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 9715625 - 9715658
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  9715625 caaaagggccttataattagggacggaggtagta 9715658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 12814558 - 12814525
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||| ||||||||||||||||||||||||    
T  12814558 aaaagggtcctataattagggacggaggtagtat 12814525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 15892567 - 15892600
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||    
T  15892567 caaaagggtcttataattaggaacggaggtagta 15892600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 23530810 - 23530843
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  23530810 caaaagggccttataattagggacggaggtagta 23530843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 28888195 - 28888162
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  28888195 caaaagggccttataattagggacggaggtagta 28888162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 45039676 - 45039709
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  45039676 caaaagggtcttataattagggacggaggaagta 45039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 45943978 - 45944011
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| ||||||||||||||||||||||||||||    
T  45943978 aaaagagtcttataattagggacggaggtagtat 45944011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 6129950 - 6129918
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||| |||||||||||||||||||||||||||    
T  6129950 aaaagagtcttataattagggacggaggtagta 6129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Complemental strand, 13343806 - 13343778
Alignment:
Q  38 caaaagggtcttataattagggacggagg 66  Q
    |||||||||||||||||||||||||||||    
T  13343806 caaaagggtcttataattagggacggagg 13343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 38613507 - 38613479
Alignment:
Q  45 gtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||||    
T  38613507 gtcttataattagggacggaggtagtata 38613479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 47296550 - 47296582
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| |||||||||||||    
T  47296550 aaaagggtcttataattagagacggaggtagta 47296582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10015756 - 10015827
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  10015756 gcaaaggggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 10015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8321995 - 8321925
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8321995 gcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15996740 - 15996810
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  15996740 gcaaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 46845461 - 46845530
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  46845461 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 46845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7181420 - 7181349
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  7181420 gcaaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 7181349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20621651 - 20621721
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  20621651 gcaaaggggtcttataaaaagggacaattttttttttcaaaagagtcttataattagggacggaggtagta 20621721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 22103897 - 22103967
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  22103897 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 22103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 25149090 - 25149160
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  25149090 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 25149160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 30819947 - 30819877
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||| |||||||||||||||||||    
T  30819947 caaaggggtcttataaaaagggacaattttttttctcaaaagggtcttatagttagggacggaggtagtat 30819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 35868051 - 35868121
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  35868051 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 37728782 - 37728712
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  37728782 caaaggggtcttataaaaagggacaacaaatattctcaaaagggtcttataattagggacggagggagtat 37728712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 44543851 - 44543781
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  44543851 caaaggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggagggagtat 44543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 4024121 - 4024052
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  4024121 caaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 9499465 - 9499534
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  9499465 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 10656759 - 10656690
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||          |||||||||||||||||||||| ||||||||||||    
T  10656759 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaggggcggaggtagtat 10656690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 19897805 - 19897874
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  19897805 aaaggagtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 19897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 28875255 - 28875290
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  28875255 caaaagggtcttataattagggacggaggtagtata 28875290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 47008470 - 47008539
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  47008470 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagtgtcttataattagggacggaggtagta 47008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 4759355 - 4759389
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  4759355 caaaagggtcttataattagggacggaggtagtat 4759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 14428678 - 14428610
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  14428678 aaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14758908 - 14758836
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||| ||||    
T  14758908 gcaaatgggtcttataaaaagggacaaaaaaaattatcaaaagggtcttataattagggacggaggtaatata 14758836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 24087339 - 24087373
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  24087339 caaaagggtcttataattagggacggaggtagtat 24087373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 41392884 - 41392918
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  41392884 caaaagggtcttataattagggacggaggtagtat 41392918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 42801554 - 42801520
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  42801554 caaaagggtcttataattagggacggaggtagtat 42801520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 46703096 - 46703032
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggagg 66  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  46703096 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 50433360 - 50433428
Alignment:
Q  5 aggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||          || |||||||||||||||||||||||||||||||||    
T  50433360 aggggtcttataaaaagggacaaaaaaaattctcacaagggtcttataattagggacggaggtagtata 50433428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 4759121 - 4759088
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  4759121 caaaagggtcttataattagggacggaggtagta 4759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 12906418 - 12906451
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||||||||    
T  12906418 aaaagggtcttataattagggacggaggtagtat 12906451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 32969193 - 32969264
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          |||||||||||||||||||||||||| |||||||||    
T  32969193 caaagggatcttataaaaagggacaaattattttttcaaaagggtcttataattagggacgggggtagtata 32969264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 43868172 - 43868101
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  43868172 caaagaggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 43868101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 45513641 - 45513674
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  45513641 caaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 48904268 - 48904301
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||||||||    
T  48904268 aaaagggtcttataattagggacggaggtagtat 48904301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9582313 - 9582243
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| |||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||    
T  9582313 gcaaaagggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggatggaggtagta 9582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47067004 - 47066934
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  47067004 gcaaagtggtcttataaaaagggacaaaaaatattctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 6784727 - 6784762
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||||||||||||||||||||| |||||||    
T  6784727 caaaagggtcttataattagggacggagatagtata 6784762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 15095267 - 15095198
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||| ||||||||||||||||||||||||    
T  15095267 caaagggatcttataaaaagggacaattttttttctcaaaagggttttataattagggacggaggtagta 15095198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 17589880 - 17589915
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||| |||||||||||||||||||||||||||||    
T  17589880 caaaagtgtcttataattagggacggaggtagtata 17589915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 20918252 - 20918221
Alignment:
Q  38 caaaagggtcttataattagggacggaggtag 69  Q
    ||||||||||||||||||||||||||||||||    
T  20918252 caaaagggtcttataattagggacggaggtag 20918221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 20927214 - 20927183
Alignment:
Q  38 caaaagggtcttataattagggacggaggtag 69  Q
    ||||||||||||||||||||||||||||||||    
T  20927214 caaaagggtcttataattagggacggaggtag 20927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 26058615 - 26058546
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  26058615 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 28673263 - 28673332
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| ||||||||||||||||||||          ||||||| |||||||||||||||||||||||||||    
T  28673263 aaagaggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagtat 28673332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 29454790 - 29454825
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29454790 caaaagggtcttataattaaggacggaggtagtata 29454825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 45252842 - 45252773
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  45252842 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 45404408 - 45404373
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||| ||||||||    
T  45404408 caaaagggtcttataattagggacggatgtagtata 45404373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 52177833 - 52177798
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    |||||||||| |||||||||||||||||||||||||    
T  52177833 caaaagggtcctataattagggacggaggtagtata 52177798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 1111652 - 1111686
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| ||||||    
T  1111652 caaaagggtcttataattagggacggagatagtat 1111686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 1572400 - 1572332
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagt 70  Q
    ||||||||||||||||||| ||||||          |||||||||||||||||||||||||||| ||||    
T  1572400 caaaggggtcttataaaaaaggacaaaaaaaattctcaaaagggtcttataattagggacggagttagt 1572332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 6784527 - 6784463
Alignment:
Q  7 gggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  6784527 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggaggtagta 6784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 8547169 - 8547203
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||| |||||||||||||||||||    
T  8547169 caaaagggtcttatacttagggacggaggtagtat 8547203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 12050396 - 12050430
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  12050396 caaaagggtcttataattagggacggagggagtat 12050430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 14428873 - 14428907
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  14428873 caaaagggtcttataattagggacggagggagtat 14428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 17699035 - 17699069
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||| |||||||||||||||||||||||||||||    
T  17699035 caaaatggtcttataattagggacggaggtagtat 17699069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 20621458 - 20621424
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  20621458 caaaagggtcctataattagggacggaggtagtat 20621424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 20862461 - 20862495
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  20862461 caaaagggtcttataattagggacggagggagtat 20862495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 21756554 - 21756486
Alignment:
Q  3 aaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  21756554 aaagaggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 24813635 - 24813601
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  24813635 caaaaggatcttataattagggacggaggtagtat 24813601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 26806148 - 26806114
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  26806148 caaaagggtcttataattagggacggagggagtat 26806114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 27688019 - 27687985
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||| |||||||||||||||    
T  27688019 caaaagggtcttataattaaggacggaggtagtat 27687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 33868712 - 33868746
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  33868712 caaaagggtcttataattagggacggagggagtat 33868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 44542477 - 44542507
Alignment:
Q  38 caaaagggtcttataattagggacggaggta 68  Q
    |||||||||||||||||||||||||||||||    
T  44542477 caaaagggtcttataattagggacggaggta 44542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Original strand, 48902716 - 48902746
Alignment:
Q  42 agggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||    
T  48902716 agggtcttataattagggacggaggtagtat 48902746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 48909905 - 48909871
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||    
T  48909905 caaaagggtcttataattagggactgaggtagtat 48909871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 49383412 - 49383344
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  49383412 caaaggggtcttataaaaagggacaattttttttt-caaaagagtcttataattagggacggaggtagta 49383344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 50647717 - 50647683
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  50647717 caaaagggtcttataattagggacggagggagtat 50647683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 51284066 - 51284100
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  51284066 caaaagggtcttataattagggacggagggagtat 51284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 4564270 - 4564237
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||||||||||    
T  4564270 caaaagagtcttataattagggacggaggtagta 4564237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 8503509 - 8503542
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||| ||||||||||||||||||    
T  8503509 caaaagggtcttatatttagggacggaggtagta 8503542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 10015563 - 10015530
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  10015563 caaaagggtcctataattagggacggaggtagta 10015530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 10045104 - 10045137
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  10045104 caaaagggtcttataattagggacggatgtagta 10045137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 10220966 - 10220933
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  10220966 caaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 10656956 - 10656989
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  10656956 caaaagggccttataattagggacggaggtagta 10656989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 19897610 - 19897577
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  19897610 caaaagggtcctataattagggacggaggtagta 19897577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 21459015 - 21458982
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  21459015 caaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 26593769 - 26593802
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  26593769 caaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 27646310 - 27646343
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  27646310 caaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 28673068 - 28673035
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||| ||||||||||||||||||||||||    
T  28673068 caaaagggttttataattagggacggaggtagta 28673035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 29719714 - 29719747
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  29719714 caaaagggtcttataattatggacggaggtagta 29719747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 33212430 - 33212397
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  33212430 caaaaggatcttataattagggacggaggtagta 33212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 33360918 - 33360885
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  33360918 caaaagggtcttataattaaggacggaggtagta 33360885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 43978192 - 43978159
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| |||||    
T  43978192 aaaagggtcttataattagggacggaggaagtat 43978159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 46049990 - 46050023
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  46049990 caaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 46845264 - 46845231
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  46845264 caaaagggccttataattagggacggaggtagta 46845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 49543710 - 49543677
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  49543710 caaaagggtcttataattagggacggaagtagta 49543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 50433161 - 50433128
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||| |||||||||||||||||||||||||    
T  50433161 caaaagggccttataattagggacggaggtagta 50433128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 50517526 - 50517559
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  50517526 caaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 53164196 - 53164163
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  53164196 caaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 54866537 - 54866570
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  54866537 caaaaggatcttataattagggacggaggtagta 54866570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 1327636 - 1327604
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||| |||||||||    
T  1327636 aaaagggtcttataattagggactgaggtagta 1327604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 18658429 - 18658461
Alignment:
Q  40 aaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||    
T  18658429 aaagggtcttataattagggacgggggtagtat 18658461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 42044257 - 42044289
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    |||||| ||||||||||||||||||||||||||    
T  42044257 aaaaggatcttataattagggacggaggtagta 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 164284 - 164213
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||| ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  164284 gcaaagtggtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 38858367 - 38858296
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  38858367 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 38858296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33381541 - 33381611
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  33381541 gcaaaggggtcttataaaaagggacaaaaaaaatct-caaaagggtcttataattagggacggaggtagtat 33381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 39871581 - 39871651
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  39871581 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 39871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 2290020 - 2290055
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  2290020 caaaagggtcttataattagggacggaggtagtata 2290055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 9682671 - 9682602
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  9682671 caaaggggtcttataaaaagggacaaattattttttcaaaagagtcttataattagggacggaggtagta 9682602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 21295220 - 21295151
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  21295220 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 27813529 - 27813494
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  27813529 caaaagggtcttataattagggacggaggtagtata 27813494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 31458066 - 31457997
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  31458066 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32118131 - 32118200
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  32118131 gcaaaggggtcttataaaaagggacaattttttttt-caaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 40300299 - 40300230
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  40300299 caaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 41252329 - 41252398
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  41252329 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 34012521 - 34012555
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  34012521 caaaagggtcttataattagggacggaggtagtat 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 1574751 - 1574718
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||||||||    
T  1574751 aaaagggtcttataattagggacggaggtagtat 1574718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 29286005 - 29286076
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  29286005 caaaagggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 29286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 31581710 - 31581677
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  31581710 caaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 42541864 - 42541897
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||||||||    
T  42541864 aaaagggtcttataattagggacggaggtagtat 42541897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19920633 - 19920563
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||| ||||          ||||||||||||||||||||||||||||| ||||    
T  19920633 gcaaaggggtcttataaaaaggaacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 32814502 - 32814432
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  32814502 caaatgggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 32814432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 7400162 - 7400127
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7400162 caaaaggatcttataattagggacggaggtagtata 7400127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 19845637 - 19845706
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||          ||||||| ||||||||||||||||||||||||||    
T  19845637 caaaggggtcttataaaaaaggacaaatttttttctcaaaaggatcttataattagggacggaggtagta 19845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 20075111 - 20075146
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20075111 caaaagggtcttataattagggacggagggagtata 20075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 28060981 - 28061016
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28060981 caaaagggtcttataattagggacggagggagtata 28061016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 30534774 - 30534705
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  30534774 caaaggagtcttataaaaagggacaaattattttttcaaaagtgtcttataattagggacggaggtagta 30534705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 32872343 - 32872412
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  32872343 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 33858839 - 33858904
Alignment:
Q  7 gggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  33858839 gggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtat 33858904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 35888345 - 35888310
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35888345 caaaaaggtcttataattagggacggaggtagtata 35888310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 36698135 - 36698170
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36698135 caaaagggtcttataattagggacggagggagtata 36698170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 41026064 - 41026133
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||| |||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  41026064 caaatgggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 46415009 - 46415044
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||| ||||||||||||||||||||||||||||||    
T  46415009 caaaatggtcttataattagggacggaggtagtata 46415044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 49045088 - 49045157
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||          |||||||||||||||||||| |||||||||||||    
T  49045088 caaagaggtcttataaaaagggacaaattattttttcaaaagggtcttataattagagacggaggtagta 49045157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 7607636 - 7607670
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||| |||||||||||||||||||    
T  7607636 caaaagggtcttatatttagggacggaggtagtat 7607670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 9140537 - 9140571
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||| ||||||    
T  9140537 caaaagggtcttataattagggacggagatagtat 9140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 12616387 - 12616421
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||| |||||||||||||||||    
T  12616387 caaaagggtcttataataagggacggaggtagtat 12616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 12930351 - 12930317
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||| ||||||||||||||||||||||||||||    
T  12930351 caaaagagtcttataattagggacggaggtagtat 12930317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 22991748 - 22991782
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  22991748 caaaaggatcttataattagggacggaggtagtat 22991782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 31769336 - 31769366
Alignment:
Q  38 caaaagggtcttataattagggacggaggta 68  Q
    |||||||||||||||||||||||||||||||    
T  31769336 caaaagggtcttataattagggacggaggta 31769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 39135128 - 39135094
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||| ||||||||||||||||||||||    
T  39135128 caaaagggtcttgtaattagggacggaggtagtat 39135094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 73
Target Start/End: Original strand, 6799556 - 6799585
Alignment:
Q  44 ggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||||    
T  6799556 ggtcttataattagggacggaggtagtata 6799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18751986 - 18752019
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||| |||||||||||||||||||||||||||    
T  18751986 caaaagagtcttataattagggacggaggtagta 18752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 19292872 - 19292839
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  19292872 caaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 21119590 - 21119557
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  21119590 caaaaggatcttataattagggacggaggtagta 21119557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 68
Target Start/End: Complemental strand, 21135308 - 21135279
Alignment:
Q  39 aaaagggtcttataattagggacggaggta 68  Q
    ||||||||||||||||||||||||||||||    
T  21135308 aaaagggtcttataattagggacggaggta 21135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 26255129 - 26255096
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  26255129 caaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 26299349 - 26299316
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  26299349 caaaagggtcttataattagggacggaagtagta 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 26736751 - 26736784
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||| ||||||||||    
T  26736751 caaaagggtcttataattagggatggaggtagta 26736784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 27529262 - 27529229
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  27529262 caaaaggatcttataattagggacggaggtagta 27529229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 28016549 - 28016582
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  28016549 caaaagggtcttataattagggacggaagtagta 28016582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 32117806 - 32117773
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  32117806 caaaagggtcctataattagggacggaggtagta 32117773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 32643761 - 32643794
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||    
T  32643761 caaaagggtcttataattaggaacggaggtagta 32643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 32759589 - 32759556
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  32759589 caaaaaggtcttataattagggacggaggtagta 32759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 33381391 - 33381358
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||| |||||||||||||||||||||||    
T  33381391 caaaagggtcctataattagggacggaggtagta 33381358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 35569655 - 35569688
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  35569655 caaaagggtcttataattaaggacggaggtagta 35569688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 38428411 - 38428444
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  38428411 caaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 39197751 - 39197718
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  39197751 caaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 41444467 - 41444500
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||| ||||||||||||||||||||||||||    
T  41444467 caaaaggatcttataattagggacggaggtagta 41444500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 43093413 - 43093446
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||| |||||||||||    
T  43093413 caaaagggtcttataattaggggcggaggtagta 43093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 48521062 - 48521029
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  48521062 caaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6577 - 6647
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  6577 gcaaaggggtcttataaaaagggacaattttttttc-caaaagggtcttataattagggacggaggtagtat 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 6384 - 6350
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||| ||||||||||||||||||||||||    
T  6384 caaaagggtcctataattagggacggaggtagtat 6350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 246525 - 246455
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||    
T  246525 caaaggggtcttataaaaagggacaaattattttttcaaaagggtcttataattaggaacggaggtagtat 246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3507 - 3438
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  3507 gcaaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggaggtagta 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 1450 - 1484
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||    
T  1450 caaaagggtcttataattagggacggaggtagtat 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 5184 - 5151
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  5184 caaaagggtcttataattagggacggaggtagta 5151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 10186 - 10219
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  10186 caaaagggtcttataattagggacggaggtagta 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 18530 - 18497
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  18530 caaaagggtcttataattagggacggaggtagta 18497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 18760 - 18793
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  18760 caaaagggtcttataattagggacggaggtagta 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 48687 - 48654
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||||||||    
T  48687 caaaagggtcttataattagggacggaggtagta 48654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 51650 - 51721
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  51650 caaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 51721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 47709 - 47638
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    |||||| |||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  47709 caaaggagtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 47638  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 12133 - 12063
Alignment:
Q  2 caaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  12133 caaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggagggagtata 12063  T

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Target: scaffold0604 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3750 - 3819
Alignment:
Q  1 gcaaaggggtcttataaaaagggacaannnnnnnnnncaaaagggtcttataattagggacggaggtagta 71  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||    
T  3750 gcaaaggggtcttataaaaagggacaaaaaaattct-caaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 19731 - 19696
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19731 caaaagggtcttataattagggacggatgtagtata 19696  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 355335 - 355370
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtata 73  Q
    ||||||||||||||||||||||||||||| ||||||    
T  355335 caaaagggtcttataattagggacggagggagtata 355370  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 9430 - 9464
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||| |||||||||||||||||||||||||||    
T  9430 caaaaggatcttataattagggacggaggtagtat 9464  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 259126 - 259160
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagtat 72  Q
    ||||||||||||||||||||||||||||| |||||    
T  259126 caaaagggtcttataattagggacggagggagtat 259160  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 7144 - 7177
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  7144 caaaagggtcttataattagggacggaggaagta 7177  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  38 caaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 45704 - 45672
Alignment:
Q  39 aaaagggtcttataattagggacggaggtagta 71  Q
    ||||||||||||||||||| |||||||||||||    
T  45704 aaaagggtcttataattagagacggaggtagta 45672  T

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