View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3070A-Insertion-2 (Length: 591)
Name: NF3070A-Insertion-2
Description: NF3070A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3070A-Insertion-2 |
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Alignment Details
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 56 - 405
Target Start/End: Complemental strand, 17443820 - 17443472
Alignment:
| Q |
56 |
gtgaaagtgttagtatcagttaaagacatgtcgtgccttgttcaaaaagaagttaaatacatgtcgatggaacttgacaatatgatggtttacttgtgct |
155 |
Q |
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| T |
17443820 |
gtgaaagtgttagtatcagagaaagacatgtcgtgccttgttcaaaaagaagttaaatacatgtcgatggaacttgacaatatgatggtttacttgtgtt |
17443721 |
T |
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| Q |
156 |
tcatgtttatagcgtttattaatctgaactgttttacaaaggcatgttgtgaacaaaataagtacatttggataat-aacaaaaatgtcgtgaaactag- |
253 |
Q |
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| T |
17443720 |
tcatgtttatagcgtttattaatctgaactattttacaaaggcatgttgtgaacaaaataagtacatttggataataaaaaaaaatgtcgtgaaactaga |
17443621 |
T |
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| Q |
254 |
aaagaaataaggccaaacatggagagctactctcacccaacatcatgaataaattatgaactacacataaaaattgtcgaacgaggttggatttaatagg |
353 |
Q |
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| T |
17443620 |
aaagaaat-aggccaaacatggagagctactctcacccaacaacatgaataaattatgaactacac--aaaaattgtcgaacgaggttgaatttaatagg |
17443524 |
T |
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| Q |
354 |
ccacggtgttttggtcaatagaaatagttttattcatgaatatcacacttat |
405 |
Q |
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| T |
17443523 |
ccacggtgttttggttaatagaaatagttttattcataaatatcacacttat |
17443472 |
T |
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