View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3070A-Insertion-7 (Length: 431)

Name: NF3070A-Insertion-7
Description: NF3070A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3070A-Insertion-7
NF3070A-Insertion-7
[»] chr4 (10 HSPs)
chr4 (59-431)||(30566864-30567237)
chr4 (7-76)||(30567311-30567380)
chr4 (59-112)||(30567260-30567313)
chr4 (14-132)||(25057281-25057399)
chr4 (335-404)||(25057006-25057075)
chr4 (14-78)||(54846161-54846225)
chr4 (12-77)||(50609439-50609504)
chr4 (30-123)||(53481193-53481286)
chr4 (14-78)||(46218711-46218775)
chr4 (14-78)||(12832937-12833001)
[»] chr2 (7 HSPs)
chr2 (14-423)||(44602690-44603102)
chr2 (345-420)||(2089404-2089479)
chr2 (14-130)||(32487891-32488007)
chr2 (12-126)||(5663404-5663519)
chr2 (32-79)||(18697437-18697484)
chr2 (14-76)||(24220649-24220711)
chr2 (14-75)||(15139932-15139993)
[»] chr1 (2 HSPs)
chr1 (351-431)||(1947357-1947437)
chr1 (36-129)||(1947039-1947132)
[»] chr3 (4 HSPs)
chr3 (45-130)||(28946687-28946772)
chr3 (332-423)||(28946391-28946482)
chr3 (336-423)||(31874554-31874641)
chr3 (350-386)||(644012-644048)
[»] chr6 (2 HSPs)
chr6 (16-79)||(32159586-32159650)
chr6 (14-117)||(14392801-14392903)
[»] chr8 (2 HSPs)
chr8 (47-131)||(38246478-38246562)
chr8 (14-76)||(20129285-20129347)
[»] chr7 (4 HSPs)
chr7 (350-386)||(3682765-3682801)
chr7 (14-117)||(21376215-21376318)
chr7 (14-76)||(13063682-13063744)
chr7 (14-76)||(44362724-44362786)
[»] chr5 (1 HSPs)
chr5 (14-76)||(35076888-35076950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (14-79)||(3446-3511)
[»] scaffold0031 (1 HSPs)
scaffold0031 (46-79)||(51779-51812)
[»] scaffold1185 (1 HSPs)
scaffold1185 (53-117)||(1568-1632)


Alignment Details
Target: chr4 (Bit Score: 326; Significance: 0; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 59 - 431
Target Start/End: Complemental strand, 30567237 - 30566864
Alignment:
Q  59 attgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatggctactcagtgcgggatacattcaggttatcactcattcagg 158  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30567237 attgtgttgcaggaaaatgttgctaatagacggaagtggttgttagatccaattcatggctactcagtgcgggatacatacaggttatcactcattcagg 30567138  T
Q  159 tgggcaggtggatagaacttaggtggatgatgtctg-cataggcatattcctctcaagtgtctatgttagcttgacgccttttccaaaacagacttccaa 257  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30567137 tgggcaggtggatagaacttaggtggatgatgtctggcataggcatattcctctcaagtgtctatgttagcttgacgccttttccaaaacagacttccaa 30567038  T
Q  258 cgaaagacaatttagcgagacagggaattcttcactctatgggcatcacgtgcgcagcagtagggtgcgagagtacggaaacgacaacacacttatttct 357  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  30567037 tgaaagacaatttagcgagacagggaattcttcactctatggacatcacgtgcacaacagtagggtgcgagagtacggaaacgacaacacacttatttct 30566938  T
Q  358 tcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagtatttctttggttactcttgttc 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  30566937 tcaatgtgacacatccagagagctttggtctaaagtctggaactgcttaggtatttctttggttactcctgttc 30566864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 30567380 - 30567311
Alignment:
Q  7 actaacctgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30567380 actagcctgggaggaagacagtgttagggagtgttctcttttattacataacattgtgttgcaggaaaat 30567311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 30567260 - 30567313
Alignment:
Q  59 attgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaatt 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30567260 attgtgttgcaggaaaatgttggtaatagatggaggtggttgttagatccaatt 30567313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 25057399 - 25057281
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattc 113  Q
    |||||||| || |||| | |||||||||| |||||||||||||||||| | |||||||||||||||  | | |  ||||  |||||||||||||| ||||    
T  25057399 tgggaggaggaaagtgctcgggagtgttctcttttattacataacattattttgcaggaaaatgttaatgacacttggaaatggttgttagatcctattc 25057300  T
Q  114 atggctactcagtgcggga 132  Q
    ||||||| |||||| ||||    
T  25057299 atggctattcagtgtggga 25057281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 25057075 - 25057006
Alignment:
Q  335 gaaacgacaacacacttatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggt 404  Q
    |||| |||| |||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  25057075 gaaatgacaccacatttatttcttcattgtgacacatccagagagctttggtataaagtttggaactggt 25057006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 54846225 - 54846161
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgt 78  Q
    |||||||| || ||||| |||||||||||  ||||| ||||||||||||| ||||||||||||||    
T  54846225 tgggaggaggagagtgtgagggagtgttctgttttactacataacattgttttgcaggaaaatgt 54846161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 50609504 - 50609439
Alignment:
Q  12 cctgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatg 77  Q
    |||||||||| || ||||| |||||||||||  ||||||| ||||||||||| |||||||| ||||    
T  50609504 cctgggaggaggaaagtgtgagggagtgttcagttttatttcataacattgttttgcaggataatg 50609439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 53481286 - 53481193
Alignment:
Q  30 ttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatggctactc 123  Q
    ||||||||||||| || |||||| |||||||| | |||||||||| ||||  | | | |||| ||||| |||||||||| |||||||| |||||    
T  53481286 ttagggagtgttctctgttattatataacatttttttgcaggaaactgttcatgacaaatggcggtggctgttagatcccattcatggttactc 53481193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 46218711 - 46218775
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgt 78  Q
    |||||||| || | ||| |||||||||||  | ||||||||||||||||| ||||||||||||||    
T  46218711 tgggaggaggagaatgtgagggagtgttctgtgttattacataacattgttttgcaggaaaatgt 46218775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 12832937 - 12833001
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgt 78  Q
    |||||||| || ||||| ||||||||| |   ||||||| |||||||||| ||||||||||||||    
T  12832937 tgggaggaggagagtgtgagggagtgtgcaactttattagataacattgttttgcaggaaaatgt 12833001  T

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Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 423
Target Start/End: Original strand, 44602690 - 44603102
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattc 113  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||||| |||||||||   ||| | ||||  ||||||||||| |||||||||||||    
T  44602690 tgggaggaagagagtgttagggagtgttctattttattatataacattgttttgcaggaatccgttacaaatacttggaggtggttattagatccaattc 44602789  T
Q  114 atggctactcagtgcgggatacattcagg-ttatcactcattcaggtgggcaggtggatagaacttaggtggatgatgtct-gcataggcatattcctct 211  Q
    ||||||| |||||||||||  |||  ||| || | |||||||||||||     |||||||| |||   ||||||||||| | |||||| |||||||||||    
T  44602790 atggctattcagtgcgggaagcatataggtttcttactcattcaggtgaaaccgtggataggactcttgtggatgatgtttggcatagacatattcctct 44602889  T
Q  212 c-aagtgtctatgttagcttgacgccttttccaaaacagacttccaacgaaagacaatttagcgagacagggaattcttcactctatgggcatcacgtgc 310  Q
    | |||| ||| || | |  || || || || | ||| ||||| || || ||||| |||||   ||  |  ||  ||||||||  ||||  || ||| |||    
T  44602890 caaagtatctctgatggtctggcgtctgtttcgaaatagactaccgacaaaagataatttgttgactcgaggtgttcttcacaatatgaacaccacctgc 44602989  T
Q  311 gcagcagtagggtgcgagagtacggaaacgacaacacacttatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagta 410  Q
    ||  ||  |||||| || || || ||||||||| | || ||||||||||| |||  | |||||||||||||||||| |||||||||||| ||| || |||    
T  44602990 gcgacaccagggtgtgatagcaccgaaacgacatctcatttatttcttcagtgtcccgcatccagagagctttggtataaagtctggaattggctaggta 44603089  T
Q  411 tttctttggttac 423  Q
    |||||||||||||    
T  44603090 tttctttggttac 44603102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 2089479 - 2089404
Alignment:
Q  345 cacacttatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagtatttctttggt 420  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||| || |  || |||||| |||||||||||||    
T  2089479 cacatttatttcttcaatgtgacacatctagagagctttggtataatgttttcaattggttaggtatttctttggt 2089404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 32488007 - 32487891
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattc 113  Q
    |||||||| || ||||| |||||||| ||  |||||||||||||| |||| ||||||||||   ||  | |||  |||||||||||||||||||| ||||    
T  32488007 tgggaggaggagagtgtgagggagtgctctgttttattacataacgttgttttgcaggaaacgattcatgatacttggaggtggttgttagatcctattc 32487908  T
Q  114 atggctactcagtgcgg 130  Q
    |||| |  |||||||||    
T  32487907 atggttgttcagtgcgg 32487891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 5663519 - 5663404
Alignment:
Q  12 cctgggaggaagacagtgttagggagtgttcgcttttattacat-aacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaa 110  Q
    |||||||||| || | ||| |||||||||||  ||||||||||| |||||||| |||||||| ||||||  | |||  ||||||||||  |||||||| |    
T  5663519 cctgggaggaggaaaatgtgagggagtgttcaattttattacataaacattgttttgcaggataatgttcatgatacttggaggtggtatttagatccta 5663420  T
Q  111 ttcatggctactcagt 126  Q
     ||||||||| |||||    
T  5663419 ctcatggctattcagt 5663404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 18697484 - 18697437
Alignment:
Q  32 agggagtgttcgcttttattacataacattgtgttgcaggaaaatgtt 79  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  18697484 agggagtgttctgttttattacataacattgttttgcaggataatgtt 18697437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 24220649 - 24220711
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||||||| || ||||| ||| |||||||  | ||||||||||||||||| ||||||||||||    
T  24220649 tgggaggaggagagtgtgaggtagtgttctgtgttattacataacattgttttgcaggaaaat 24220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 15139932 - 15139993
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaa 75  Q
    |||||||| || ||||| || |||||| |  ||||||||||||||||||| |||||||||||    
T  15139932 tgggaggaggatagtgtgagagagtgtgcttttttattacataacattgttttgcaggaaaa 15139993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 351 - 431
Target Start/End: Original strand, 1947357 - 1947437
Alignment:
Q  351 tatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagtatttctttggttactcttgttc 431  Q
    ||||||||||||| ||||  ||||||||||||||||  ||||||||||| ||| || |||| ||||||||||| |||||||    
T  1947357 tatttcttcaatgcgacatttccagagagctttggtgcaaagtctggaattggctaggtatctctttggttacacttgttc 1947437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 1947039 - 1947132
Alignment:
Q  36 agtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatggctactcagtgcg 129  Q
    ||||||| |||||||||||||||||||| ||||||||    |||  | |||  ||||| ||||||||||||||| |||||||||| ||||||||    
T  1947039 agtgttctcttttattacataacattgttttgcaggattccgttaatgatacttggagatggttgttagatccagttcatggctattcagtgcg 1947132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 28946772 - 28946687
Alignment:
Q  45 ttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatggctactcagtgcgg 130  Q
    ||||||||||||||||||| || ||||||  |||| || ||  ||||||||||||| ||||||| |||||||| || |||||||||    
T  28946772 ttttattacataacattgttttacaggaatttgttactgattcatggaggtggttgctagatcctattcatggttattcagtgcgg 28946687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 28946482 - 28946391
Alignment:
Q  332 acggaaacgacaacacacttatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagtatttctttggttac 423  Q
    |||||||||||| | || ||||||||||| ||   ||||| | |||||||||||| ||| |||||||| ||| || ||||||||||||||||    
T  28946482 acggaaacgacatctcatttatttcttcagtgccccacattcggagagctttggtataaggtctggaattggctaggtatttctttggttac 28946391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 31874641 - 31874554
Alignment:
Q  336 aaacgacaacacacttatttcttcaatgtgacacatccagagagctttggtctaaagtctggaactggttaagtatttctttggttac 423  Q
    |||||||| | || ||||||||||| |||  | ||| |||||||||||||   ||||||||||| |||||| ||||||||||||||||    
T  31874641 aaacgacatctcatttatttcttcagtgttcctcattcagagagctttggcacaaagtctggaattggttaggtatttctttggttac 31874554  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 644048 - 644012
Alignment:
Q  350 ttatttcttcaatgtgacacatccagagagctttggt 386  Q
    ||||||||||||||||||||||| |||||||||||||    
T  644048 ttatttcttcaatgtgacacatctagagagctttggt 644012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 32159586 - 32159650
Alignment:
Q  16 ggaggaagacagtgttagggagtgttc-gcttttattacataacattgtgttgcaggaaaatgtt 79  Q
    |||||| || ||||| |||||||| || | |||||||||||||||||||||||||||||||||||    
T  32159586 ggaggaggagagtgtgagggagtgctctgtttttattacataacattgtgttgcaggaaaatgtt 32159650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 14392903 - 14392801
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattc 113  Q
    |||||||| || ||||| |||||||||||  | ||| | |||||| |||| ||||||||||| |||  | |||  |||||||||||||||||||| ||||    
T  14392903 tgggaggaggagagtgtgagggagtgttctgtgttacttcataacgttgttttgcaggaaaa-gttcatgatacttggaggtggttgttagatcctattc 14392805  T
Q  114 atgg 117  Q
    ||||    
T  14392804 atgg 14392801  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 38246562 - 38246478
Alignment:
Q  47 ttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatggctactcagtgcggg 131  Q
    ||||||||||||||||| ||||| || ||||||   ||||  ||| ||||| |||||||||| ||||||||||| || |||||||    
T  38246562 ttattacataacattgttttgcacgataatgtttacaatacctggcggtggctgttagatcctattcatggctattcggtgcggg 38246478  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 20129285 - 20129347
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||||||| || ||||| | |||||||||  | ||||||||||||||||| ||||||||||||    
T  20129285 tgggaggaggagagtgtgatggagtgttctgtgttattacataacattgttttgcaggaaaat 20129347  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 3682801 - 3682765
Alignment:
Q  350 ttatttcttcaatgtgacacatccagagagctttggt 386  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3682801 ttatttcttcaatgtgacgcatccagagagctttggt 3682765  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 21376318 - 21376215
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattc 113  Q
    |||||||| || | ||| |||||||||||  | ||| | ||||||| ||| |||||||||||||| |   |||  ||||||||| |||||||||||||||    
T  21376318 tgggaggaggagaatgtgagggagtgttctgtgttacttcataacaatgttttgcaggaaaatgtcgaagatacttggaggtggctgttagatccaattc 21376219  T
Q  114 atgg 117  Q
    ||||    
T  21376218 atgg 21376215  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 13063682 - 13063744
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||||||| || ||||| | |||||||||  | ||||||||||||||||| ||||||||||||    
T  13063682 tgggaggaggagagtgtgatggagtgttctgtgttattacataacattgttttgcaggaaaat 13063744  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 44362786 - 44362724
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||||||| || ||||| | |||||||||  | ||||||||||||||||| ||||||||||||    
T  44362786 tgggaggaggagagtgtgatggagtgttctgtgttattacataacattgttttgcaggaaaat 44362724  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 35076888 - 35076950
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaat 76  Q
    |||||||| || ||||| |||||||||||  | ||||||| ||||||||| ||||||||||||    
T  35076888 tgggaggaggagagtgtgagggagtgttctatgttattacgtaacattgttttgcaggaaaat 35076950  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 3446 - 3511
Alignment:
Q  14 tgggaggaagacagtgttagggagtgttcgcttttattacataacattgtgttgcaggaaaatgtt 79  Q
    |||||||| || ||||| |||||||||||   |||||||  ||||||||| |||||||||||||||    
T  3446 tgggaggaggatagtgtgagggagtgttctgctttattatctaacattgttttgcaggaaaatgtt 3511  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 51812 - 51779
Alignment:
Q  46 tttattacataacattgtgttgcaggaaaatgtt 79  Q
    |||||||||||||||||| |||||||||||||||    
T  51812 tttattacataacattgttttgcaggaaaatgtt 51779  T

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Target: scaffold1185 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 1568 - 1632
Alignment:
Q  53 cataacattgtgttgcaggaaaatgttgctaatagatggaggtggttgttagatccaattcatgg 117  Q
    |||||| |||| |||||||||||||||  | |||  |||||||||||||||||||| ||| ||||    
T  1568 cataacgttgttttgcaggaaaatgttcatgataattggaggtggttgttagatcctatttatgg 1632  T

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