View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3071_low_19 (Length: 308)

Name: NF3071_low_19
Description: NF3071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3071_low_19
NF3071_low_19
[»] chr5 (28 HSPs)
chr5 (91-295)||(20124125-20124331)
chr5 (8-66)||(31055315-31055373)
chr5 (13-66)||(23765420-23765473)
chr5 (13-66)||(23815268-23815321)
chr5 (8-66)||(16900997-16901055)
chr5 (8-66)||(18695248-18695306)
chr5 (8-66)||(23765635-23765693)
chr5 (8-66)||(23815483-23815541)
chr5 (8-46)||(25556896-25556934)
chr5 (8-53)||(40428652-40428697)
chr5 (8-68)||(31576491-31576551)
chr5 (8-63)||(245599-245654)
chr5 (15-66)||(31648237-31648288)
chr5 (8-62)||(17704828-17704882)
chr5 (8-66)||(25557120-25557178)
chr5 (8-66)||(38408629-38408687)
chr5 (27-68)||(36641403-36641444)
chr5 (8-68)||(18695002-18695062)
chr5 (8-68)||(35302159-35302219)
chr5 (8-75)||(20654040-20654107)
chr5 (8-51)||(24025036-24025079)
chr5 (16-63)||(37961502-37961549)
chr5 (13-68)||(40428888-40428943)
chr5 (19-65)||(4800935-4800981)
chr5 (8-66)||(8645797-8645855)
chr5 (8-66)||(10379283-10379341)
chr5 (8-66)||(26639037-26639095)
chr5 (17-66)||(10379535-10379584)
[»] chr3 (43 HSPs)
chr3 (8-66)||(26628025-26628083)
chr3 (8-66)||(28154882-28154940)
chr3 (8-66)||(22447740-22447798)
chr3 (13-66)||(32960645-32960698)
chr3 (8-66)||(3328813-3328871)
chr3 (8-72)||(8339186-8339250)
chr3 (8-68)||(27852751-27852811)
chr3 (8-71)||(22500591-22500654)
chr3 (8-63)||(23428865-23428920)
chr3 (8-66)||(26628271-26628329)
chr3 (8-66)||(27852997-27853055)
chr3 (8-66)||(34878529-34878587)
chr3 (8-53)||(6927715-6927760)
chr3 (8-69)||(8338937-8338998)
chr3 (8-68)||(3329059-3329119)
chr3 (9-64)||(4775852-4775907)
chr3 (8-66)||(28173729-28173787)
chr3 (8-66)||(40836424-40836482)
chr3 (8-66)||(48907537-48907595)
chr3 (8-53)||(13081140-13081185)
chr3 (8-65)||(23428620-23428677)
chr3 (8-63)||(22447990-22448045)
chr3 (15-70)||(25336354-25336409)
chr3 (8-66)||(8542610-8542668)
chr3 (8-66)||(10743409-10743467)
chr3 (8-66)||(13080894-13080952)
chr3 (8-66)||(25179578-25179636)
chr3 (8-66)||(25179821-25179879)
chr3 (8-66)||(26723904-26723962)
chr3 (8-66)||(46673045-46673103)
chr3 (8-69)||(26722530-26722591)
chr3 (8-66)||(1743255-1743313)
chr3 (8-46)||(20001954-20001992)
chr3 (9-66)||(19984849-19984906)
chr3 (8-53)||(30155158-30155203)
chr3 (8-53)||(33279830-33279875)
chr3 (13-66)||(36311152-36311205)
chr3 (8-65)||(40836181-40836238)
chr3 (11-56)||(44457445-44457490)
chr3 (8-68)||(4776064-4776124)
chr3 (10-46)||(5001220-5001256)
chr3 (8-68)||(48860702-48860762)
chr3 (18-66)||(48860930-48860978)
[»] chr2 (24 HSPs)
chr2 (8-68)||(9787803-9787863)
chr2 (8-63)||(9787563-9787618)
chr2 (13-68)||(17368465-17368520)
chr2 (9-66)||(22191046-22191103)
chr2 (8-64)||(22191291-22191347)
chr2 (11-67)||(15735312-15735368)
chr2 (8-66)||(4587860-4587918)
chr2 (8-66)||(6763963-6764021)
chr2 (8-66)||(11175907-11175965)
chr2 (8-66)||(18537829-18537887)
chr2 (8-66)||(18538074-18538132)
chr2 (8-66)||(30714275-30714333)
chr2 (9-67)||(38716439-38716497)
chr2 (8-71)||(15735059-15735122)
chr2 (8-66)||(25299046-25299104)
chr2 (8-66)||(25884178-25884236)
chr2 (8-66)||(30714520-30714578)
chr2 (8-53)||(25298814-25298859)
chr2 (8-68)||(9051026-9051086)
chr2 (8-63)||(2986689-2986744)
chr2 (8-43)||(2986932-2986967)
chr2 (8-66)||(11176153-11176211)
chr2 (8-66)||(15700992-15701050)
chr2 (17-65)||(25884434-25884482)
[»] scaffold0683 (2 HSPs)
scaffold0683 (8-66)||(5120-5178)
scaffold0683 (8-66)||(5290-5348)
[»] chr8 (36 HSPs)
chr8 (8-66)||(5192272-5192330)
chr8 (8-71)||(4807595-4807658)
chr8 (8-66)||(23565121-23565179)
chr8 (8-66)||(23565335-23565393)
chr8 (8-71)||(8802645-8802708)
chr8 (8-75)||(33895619-33895686)
chr8 (8-66)||(19391388-19391445)
chr8 (8-66)||(19392812-19392870)
chr8 (8-66)||(21929847-21929905)
chr8 (8-68)||(12723507-12723567)
chr8 (8-63)||(12723264-12723319)
chr8 (8-63)||(22452176-22452231)
chr8 (8-63)||(30784268-30784323)
chr8 (8-67)||(30784510-30784569)
chr8 (8-66)||(18881747-18881805)
chr8 (8-66)||(19924511-19924569)
chr8 (8-66)||(21930047-21930105)
chr8 (8-66)||(44146972-44147030)
chr8 (8-66)||(44147216-44147274)
chr8 (8-68)||(19924263-19924323)
chr8 (8-68)||(21666519-21666579)
chr8 (13-68)||(3819487-3819541)
chr8 (17-68)||(33895373-33895424)
chr8 (10-53)||(35795230-35795273)
chr8 (8-63)||(38630058-38630113)
chr8 (8-66)||(3380199-3380257)
chr8 (8-66)||(4518869-4518927)
chr8 (8-66)||(4519113-4519171)
chr8 (8-66)||(8802400-8802458)
chr8 (8-66)||(17648243-17648301)
chr8 (16-66)||(17648496-17648546)
chr8 (11-53)||(34602027-34602069)
chr8 (11-53)||(34602435-34602477)
chr8 (8-66)||(18252401-18252461)
chr8 (11-56)||(27453136-27453181)
chr8 (10-55)||(45163718-45163763)
[»] chr7 (41 HSPs)
chr7 (8-73)||(31494156-31494221)
chr7 (8-68)||(36746749-36746808)
chr7 (8-66)||(19195214-19195272)
chr7 (8-66)||(21690416-21690474)
chr7 (8-66)||(48175962-48176021)
chr7 (8-66)||(8527040-8527098)
chr7 (8-66)||(11843178-11843236)
chr7 (8-66)||(20636864-20636922)
chr7 (8-66)||(21224354-21224411)
chr7 (8-66)||(27869196-27869254)
chr7 (8-66)||(39182179-39182237)
chr7 (8-66)||(42271578-42271636)
chr7 (8-66)||(48176208-48176266)
chr7 (17-66)||(2331273-2331322)
chr7 (8-53)||(3562446-3562491)
chr7 (8-69)||(17305761-17305822)
chr7 (8-68)||(42271331-42271391)
chr7 (8-63)||(18754512-18754567)
chr7 (11-53)||(5490924-5490966)
chr7 (8-66)||(19919847-19919905)
chr7 (8-66)||(24597517-24597575)
chr7 (8-66)||(31493911-31493969)
chr7 (13-66)||(14624608-14624661)
chr7 (8-68)||(10655575-10655634)
chr7 (8-64)||(13577789-13577845)
chr7 (13-65)||(17306016-17306067)
chr7 (8-68)||(19195459-19195519)
chr7 (8-68)||(24597761-24597821)
chr7 (8-48)||(26385507-26385547)
chr7 (8-56)||(41452495-41452543)
chr7 (8-67)||(10655329-10655388)
chr7 (11-66)||(21224601-21224656)
chr7 (8-66)||(13578030-13578088)
chr7 (10-68)||(15681878-15681936)
chr7 (8-66)||(20636619-20636677)
chr7 (8-66)||(20638491-20638549)
chr7 (8-74)||(24448037-24448103)
chr7 (8-65)||(2331015-2331072)
chr7 (8-53)||(7365234-7365279)
chr7 (8-53)||(19919617-19919662)
chr7 (10-47)||(34174028-34174065)
[»] chr1 (38 HSPs)
chr1 (8-68)||(3617044-3617104)
chr1 (8-68)||(24962199-24962259)
chr1 (8-66)||(4059522-4059580)
chr1 (8-66)||(28920897-28920955)
chr1 (8-66)||(51719123-51719181)
chr1 (13-66)||(24750020-24750073)
chr1 (8-65)||(43706655-43706712)
chr1 (8-65)||(50334719-50334776)
chr1 (9-68)||(50334811-50334869)
chr1 (8-66)||(2425469-2425527)
chr1 (8-66)||(3616799-3616857)
chr1 (8-66)||(19078169-19078227)
chr1 (8-66)||(19126059-19126117)
chr1 (8-66)||(24196261-24196319)
chr1 (8-66)||(24196507-24196565)
chr1 (8-66)||(46432216-46432274)
chr1 (8-53)||(16551657-16551702)
chr1 (8-73)||(29676072-29676137)
chr1 (8-53)||(48471876-48471921)
chr1 (8-72)||(28552299-28552363)
chr1 (8-68)||(46432462-46432522)
chr1 (13-64)||(10685012-10685063)
chr1 (8-66)||(4059768-4059826)
chr1 (8-66)||(16972096-16972154)
chr1 (8-66)||(24961953-24962011)
chr1 (13-66)||(2657762-2657815)
chr1 (13-66)||(27092853-27092906)
chr1 (8-68)||(10684792-10684852)
chr1 (8-68)||(19077924-19077984)
chr1 (8-68)||(19125814-19125874)
chr1 (8-68)||(43706899-43706959)
chr1 (8-67)||(2425224-2425283)
chr1 (8-70)||(16878931-16878993)
chr1 (8-66)||(18606929-18606987)
chr1 (8-66)||(28919015-28919073)
chr1 (8-57)||(30105443-30105492)
chr1 (8-53)||(43914920-43914965)
chr1 (8-56)||(6285176-6285224)
[»] scaffold0607 (1 HSPs)
scaffold0607 (8-66)||(2048-2106)
[»] scaffold0025 (4 HSPs)
scaffold0025 (8-66)||(62064-62122)
scaffold0025 (8-66)||(19527-19585)
scaffold0025 (8-66)||(61814-61872)
scaffold0025 (8-68)||(19283-19343)
[»] chr4 (38 HSPs)
chr4 (8-66)||(25011980-25012038)
chr4 (8-66)||(43793631-43793689)
chr4 (8-68)||(25011733-25011793)
chr4 (8-66)||(4433183-4433241)
chr4 (8-74)||(5304339-5304405)
chr4 (8-66)||(13397921-13397979)
chr4 (8-68)||(13394534-13394594)
chr4 (8-68)||(13397673-13397733)
chr4 (8-66)||(13826420-13826478)
chr4 (8-66)||(18259357-18259415)
chr4 (8-66)||(25618842-25618900)
chr4 (8-66)||(35475291-35475349)
chr4 (8-66)||(41877270-41877328)
chr4 (8-66)||(43793876-43793934)
chr4 (8-66)||(55780387-55780445)
chr4 (8-66)||(55844567-55844625)
chr4 (8-53)||(4357497-4357542)
chr4 (13-66)||(15058820-15058873)
chr4 (13-66)||(45633438-45633491)
chr4 (8-68)||(4357250-4357310)
chr4 (8-68)||(9397435-9397495)
chr4 (19-66)||(2931576-2931623)
chr4 (11-66)||(6789207-6789262)
chr4 (8-47)||(27018460-27018499)
chr4 (8-66)||(5304591-5304649)
chr4 (8-42)||(6319047-6319081)
chr4 (8-66)||(9195908-9195966)
chr4 (8-66)||(19232343-19232401)
chr4 (8-74)||(19232590-19232656)
chr4 (8-46)||(25618648-25618686)
chr4 (8-66)||(47869899-47869957)
chr4 (17-66)||(2931321-2931370)
chr4 (8-45)||(7035904-7035941)
chr4 (19-68)||(17138540-17138589)
chr4 (17-66)||(20919335-20919384)
chr4 (8-73)||(24626462-24626527)
chr4 (8-53)||(41034880-41034925)
chr4 (13-69)||(4433433-4433488)
[»] scaffold0419 (2 HSPs)
scaffold0419 (8-68)||(2959-3019)
scaffold0419 (8-68)||(3206-3266)
[»] chr6 (30 HSPs)
chr6 (8-71)||(25819930-25819993)
chr6 (8-66)||(4597651-4597709)
chr6 (8-62)||(14572182-14572236)
chr6 (8-66)||(18749097-18749155)
chr6 (8-67)||(26710553-26710612)
chr6 (8-66)||(24051009-24051067)
chr6 (8-66)||(32451972-32452030)
chr6 (8-66)||(35102491-35102549)
chr6 (8-65)||(4013911-4013968)
chr6 (8-53)||(4597418-4597463)
chr6 (8-56)||(15298730-15298778)
chr6 (8-68)||(18749374-18749434)
chr6 (8-68)||(25819683-25819743)
chr6 (8-66)||(32451726-32451784)
chr6 (12-66)||(35102713-35102767)
chr6 (11-66)||(3118926-3118981)
chr6 (8-67)||(8415294-8415353)
chr6 (8-55)||(12291428-12291475)
chr6 (8-47)||(18791603-18791642)
chr6 (13-66)||(4013691-4013742)
chr6 (8-66)||(14572422-14572480)
chr6 (9-67)||(19176798-19176856)
chr6 (10-72)||(27322113-27322174)
chr6 (9-66)||(6842327-6842384)
chr6 (13-66)||(22968404-22968457)
chr6 (13-66)||(23819936-23819989)
chr6 (10-47)||(27318333-27318370)
chr6 (21-66)||(34833925-34833970)
chr6 (8-52)||(15298500-15298544)
chr6 (25-53)||(32682386-32682414)
[»] scaffold0179 (2 HSPs)
scaffold0179 (8-66)||(5650-5708)
scaffold0179 (8-66)||(5895-5953)
[»] scaffold0060 (2 HSPs)
scaffold0060 (13-66)||(66424-66477)
scaffold0060 (8-66)||(66183-66242)
[»] scaffold0406 (2 HSPs)
scaffold0406 (8-66)||(2236-2294)
scaffold0406 (8-68)||(1995-2055)
[»] scaffold0024 (2 HSPs)
scaffold0024 (8-63)||(43827-43882)
scaffold0024 (8-47)||(44067-44106)
[»] scaffold0150 (1 HSPs)
scaffold0150 (8-53)||(6076-6121)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-65)||(455274-455331)
[»] scaffold0001 (2 HSPs)
scaffold0001 (15-68)||(141943-141996)
scaffold0001 (8-63)||(142192-142247)
[»] scaffold0007 (1 HSPs)
scaffold0007 (8-68)||(250516-250576)
[»] scaffold0174 (1 HSPs)
scaffold0174 (13-68)||(29938-29993)
[»] scaffold1875 (1 HSPs)
scaffold1875 (8-66)||(756-814)
[»] scaffold0062 (2 HSPs)
scaffold0062 (8-66)||(49904-49962)
scaffold0062 (8-66)||(62443-62501)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-65)||(112380-112429)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 5e-65; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 91 - 295
Target Start/End: Complemental strand, 20124331 - 20124125
Alignment:
Q  91 atttgagtataaaaatcctatttgaagtaaaaataactacaaatcatcaattttatattaatgttggaaatgtaaccnnnnnnn-tattactgttgnnnn 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||        
T  20124331 atttgagtataaaaatcctatttgaagtaaaaataactacaaatcatcaattttatattaatgttggaaatgtaaccaaaaaaaatattactgttgaaaa 20124232  T
Q  190 nnnn-tacgatagagagatgagagagaaagagcggcgatcaggtattgttcctcttctaacttgagcgtgttccttcatcctaacatcccaaccaccacc 288  Q
         ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  20124231 aaaaatacgatagagagatgagagagaaagagcggcggacaggtattgttcctcttctaccttgagcgtgttccttcatcctaatttcccaaccaccacc 20124132  T
Q  289 tttgctt 295  Q
    |||||||    
T  20124131 tttgctt 20124125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 31055373 - 31055315
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  31055373 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 31055315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 23765473 - 23765420
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23765473 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 23815321 - 23815268
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23815321 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 16901055 - 16900997
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||| || |||||||||    
T  16901055 aatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcc 16900997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18695248 - 18695306
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| || | |||||||    
T  18695248 aatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcc 18695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 23765635 - 23765693
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  23765635 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 23765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 23815483 - 23815541
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  23815483 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 23815541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 25556934 - 25556896
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggg 46  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25556934 aatagggggccaaaattgcaacattttgaaacatagggg 25556896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 40428697 - 40428652
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  40428697 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 40428652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31576551 - 31576491
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||  ||||||||||||||||||||||| |||||| |||||| || |||||||||||    
T  31576551 aatagggttccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagccaa 31576491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 245654 - 245599
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||| || ||||||    
T  245654 aatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagttta 245599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 31648237 - 31648288
Alignment:
Q  15 ggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||||||||||||||||||| |||||| || |||||||||    
T  31648237 ggccaaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcc 31648288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 17704828 - 17704882
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttt 62  Q
    |||||||||||||||| |||| |||||||||| |||||| |||||| ||||||||    
T  17704828 aatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagttt 17704882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25557120 - 25557178
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  25557120 aatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 25557178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 38408687 - 38408629
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||| |||||||||| |||||| |||||| || |||||||||    
T  38408687 aatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtggagtttagcc 38408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 36641403 - 36641444
Alignment:
Q  27 aacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  36641403 aacattttgaaacatagggggcgaaaagtgcagtttagccaa 36641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18695062 - 18695002
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||| || |||||||||||    
T  18695062 aatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 18695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 35302159 - 35302219
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||| ||| |||||| ||||||||||||||| || |||| |||||||| |||||||||||    
T  35302159 aatagagggtcaaaatcgcaacattttgaaacttaaggggagaaaaatgcagtttagccaa 35302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 20654040 - 20654107
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaattt 75  Q
    |||||| |||||||||  |||||||||||||| |||||| |||||| || ||||||||| | ||||||    
T  20654040 aataggaggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagcctaaaaattt 20654107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 24025079 - 24025036
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaa 51  Q
    |||||||||||||||| |||| |||||||||| |||||||||||    
T  24025079 aatagggggccaaaatcgcaatattttgaaacttagggggcgaa 24025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 37961502 - 37961549
Alignment:
Q  16 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  37961502 gccaaaattgcaacattttgaaacttagggggtgaaaagtgcagttta 37961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 40428888 - 40428943
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  40428888 ggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 40428943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 4800981 - 4800935
Alignment:
Q  19 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    ||||| |||||||||| |||| |||||||||||||||| ||||||||    
T  4800981 aaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 8645855 - 8645797
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| |||||||||||||||  || ||||||||| || |||||||||    
T  8645855 aatagggggtcaaaatcgcaacattttgaaactaagagggcgaaaagtgaagtttagcc 8645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 10379341 - 10379283
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| ||||||||||||| |||||||| |||| |||||| |||||||||  ||||||||    
T  10379341 aataaggggccaaaattgtaacattttaaaacttaggggacgaaaaatggggtttagcc 10379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 26639095 - 26639037
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| | ||||||  |||||||||||||||||||||||||||| || | |||||||    
T  26639095 aatagggagtcaaaatcacaacattttgaaacatagggggcgaaaagtgcactttagcc 26639037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 10379535 - 10379584
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| | ||||||| |||||||||| || |||||||||    
T  10379535 ccaaaattgcaacattataaaacataaggggcgaaaagtgcagtttagcc 10379584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 26628083 - 26628025
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26628083 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 26628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28154940 - 28154882
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28154940 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 22447798 - 22447740
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22447798 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 22447740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 32960698 - 32960645
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32960698 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcc 32960645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 3328871 - 3328813
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  3328871 aatagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 3328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 8339186 - 8339250
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 72  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| ||||    
T  8339186 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagccattaaa 8339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27852811 - 27852751
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||    
T  27852811 aatagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 27852751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 22500654 - 22500591
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 71  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||| ||||    
T  22500654 aatagggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcctataa 22500591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 23428865 - 23428920
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  23428865 aatagggggccaaaattgtaacattttgaaacttagggggcgaaaaatgaagttta 23428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 26628271 - 26628329
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  26628271 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 26628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 27852997 - 27853055
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  27852997 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 27853055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 34878587 - 34878529
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||||||||||||||||||| || || |||||||||    
T  34878587 aatagggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 34878529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 6927715 - 6927760
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  6927715 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaa 6927760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 8338998 - 8338937
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 69  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | ||||||||||    
T  8338998 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaat 8338937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3329059 - 3329119
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  3329059 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 3329119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 4775907 - 4775852
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 64  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  4775907 atagggggccaaaattgcaacattttgaaacttagagggtgaaaagtgtagtttag 4775852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28173787 - 28173729
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || | |||||||    
T  28173787 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 28173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 40836424 - 40836482
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| |||||||||| |||| |||||||||||||||| |||||||||    
T  40836424 aatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagcc 40836482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 48907537 - 48907595
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  48907537 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 48907595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 13081140 - 13081185
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  13081140 aatagggggccaaaatcgcaacattttgaaacataggaggcgaaaa 13081185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 23428677 - 23428620
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||| | |||||||||||||| |||||||||||||||||||| || ||||||||    
T  23428677 aataggggactaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagc 23428620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 22447990 - 22448045
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| || ||||||    
T  22447990 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgcagttta 22448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 25336409 - 25336354
Alignment:
Q  15 ggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaata 70  Q
    ||||||||||||||||||||||||  || |||||||||| || |||||||||||||    
T  25336409 ggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaata 25336354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 8542668 - 8542610
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||| || |||||||||    
T  8542668 aatagggggtcaaaattgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 8542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 10743467 - 10743409
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||  | |||||||||    
T  10743467 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaaagaggagtttagcc 10743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 13080952 - 13080894
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  13080952 aatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25179636 - 25179578
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||| || |||||||||    
T  25179636 aatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 25179578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25179821 - 25179879
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| |||||||| || ||||||||||||||||||||||||||||| || | |||||||    
T  25179821 aataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 25179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 26723904 - 26723962
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||   |||| |||||||| |||| ||||||||||||    
T  26723904 aatagggggccaaaattgcaacattagtaaacttagggggccaaaactgtagtttagcc 26723962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 46673103 - 46673045
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||| || | |||||||    
T  46673103 aatagggggccaaaattgcaacattatgaaacataggagacgaaaagtgcactttagcc 46673045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 26722591 - 26722530
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 69  Q
    |||||||||||||||| ||||||||   |||| |||||||| |||| |||||||||||||||    
T  26722591 aatagggggccaaaatcgcaacattggtaaacttagggggccaaaactgtagtttagccaat 26722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 1743313 - 1743255
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| ||||| | ||||||||||||| ||||| ||||||| || |||||||||    
T  1743313 aatagggggctaaaatcgaaacattttgaaacttagggtgcgaaaagtgcagtttagcc 1743255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 20001954 - 20001992
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggg 46  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  20001954 aatagggggccaaaatcgcaacattttgaaacttagggg 20001992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 19984906 - 19984849
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||  ||||||||| ||||||| ||||| || | |||||||    
T  19984906 atagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 30155203 - 30155158
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||| |||||||||| ||||||||||||||| ||||||| ||||||    
T  30155203 aataaggggccaaaactgcaacattttgaaatataggggacgaaaa 30155158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 33279830 - 33279875
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||| |||||| |||||||||| |||| |||||||||||||    
T  33279830 aatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaa 33279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 36311205 - 36311152
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| |||||||||| |||| |||||| |||||| || |||||||||    
T  36311205 ggggccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagcc 36311152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 40836238 - 40836181
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    ||||| || ||||||| |||||||||| |||| |||||| |||||| |||||||||||    
T  40836238 aatagaggaccaaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 44457445 - 44457490
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 56  Q
    ||||||||||||| ||||| |||||||||||||| || ||||||||    
T  44457445 agggggccaaaatcgcaactttttgaaacataggaggtgaaaaatg 44457490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4776064 - 4776124
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||| ||||||||||| |||||||||| || | ||| |||||||||||  |||||||||||    
T  4776064 aataaggggccaaaatcgcaacattttaaatcttagagggcgaaaaatccagtttagccaa 4776124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 5001256 - 5001220
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacatagggg 46  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  5001256 tagggggccaaaattgcaagattttgaaagatagggg 5001220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 48860762 - 48860702
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||| |||| ||||||| ||||||||| |||| ||||||||| ||| || |||||||||||    
T  48860762 aataaggggtcaaaattacaacattttaaaacttagggggcgcaaagtggagtttagccaa 48860702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 48860930 - 48860978
Alignment:
Q  18 caaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||| |||||||||||||  ||||| || |||||||||    
T  48860930 caaaattgcaacattatgaaacataggggatgaaaagtgcagtttagcc 48860978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 9787803 - 9787863
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  9787803 aatagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagccaa 9787863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 9787618 - 9787563
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9787618 aatagggggtcaaaattgcaacattttaaaacatagggggcgaaaaatgtagttta 9787563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 17368465 - 17368520
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17368465 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgttgtttagccaa 17368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 22191103 - 22191046
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  22191103 atagggggccaaaattgcaacattttaaaacataggggacgaaaagtgtagtttagcc 22191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 22191291 - 22191347
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 64  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  22191291 aataggggaccaaaattgcaacattttgaaacataggaggcgaaaagtgtagtttag 22191347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 15735312 - 15735368
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    ||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  15735312 aggggaccaaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcca 15735368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4587918 - 4587860
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| ||  ||||||||    
T  4587918 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtggtgtttagcc 4587860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 6763963 - 6764021
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| ||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  6763963 aataggggaccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 6764021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 11175965 - 11175907
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  11175965 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 11175907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 18537887 - 18537829
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||| || |||||||||    
T  18537887 aataggggaccaaaattgcaacattttaaaacataggggacgaaaagtgcagtttagcc 18537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18538074 - 18538132
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  18538074 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 18538132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 30714333 - 30714275
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| || | |||||||    
T  30714333 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 30714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 38716439 - 38716497
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| || ||||||||||    
T  38716439 atagggggtcaaaattgcaacattttgaaacataggaggtgaaaagtgcagtttagcca 38716497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 15735122 - 15735059
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 71  Q
    |||||||| ||||||| ||||||||||||||| ||| ||||||||| || ||||||||| ||||    
T  15735122 aataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctataa 15735059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25299046 - 25299104
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| ||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  25299046 aatagggggctaaaatcgcaacattttgaaacttagagggcgaaaattgaagtttagcc 25299104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25884236 - 25884178
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||  || |||||||||    
T  25884236 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcc 25884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 30714520 - 30714578
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||| |||  ||| ||||||||| || |||||||||    
T  30714520 aatagggggccaaaattgcaacattttaaaatttagagggcgaaaagtgaagtttagcc 30714578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 25298859 - 25298814
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||    
T  25298859 aataggaggccaaaatcgcaacattttaaaacatagggggcgaaaa 25298814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9051086 - 9051026
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||  |||||| |||||||||| ||||||||| ||||||||||| | |||||||||    
T  9051086 aataggggatcaaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagccaa 9051026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 2986744 - 2986689
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||| || ||||||    
T  2986744 aatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 2986932 - 2986967
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatag 43  Q
    |||||||||||||||| |||||||||||||||||||    
T  2986932 aatagggggccaaaatcgcaacattttgaaacatag 2986967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 11176153 - 11176211
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| |||||||||||||||||||| ||| |||| || | |||||||    
T  11176153 aatagggggtcaaaatcgcaacattttgaaacataggaggccaaaagtgcactttagcc 11176211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 15700992 - 15701050
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  15700992 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 15701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 25884434 - 25884482
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||||||||||||| |||| |||||| |||||||||  |||||||    
T  25884434 ccaaaattgcaacattttaaaacttaggggacgaaaaatgacgtttagc 25884482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5178 - 5120
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5178 aataggggaccaaaattgcaacattttgaaacatagggggcgaaaaatgtaatttagcc 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5348 - 5290
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||  |||||| || ||||||||||||    
T  5348 aatagggggccaaaattgcaacattttgaaacataaagggcgagaagtgtagtttagcc 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5192330 - 5192272
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5192330 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 5192272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 4807658 - 4807595
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 71  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||    
T  4807658 aatagggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcctataa 4807595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 23565179 - 23565121
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  23565179 aatagggggtcaaaattgcaacattttgaaacataaggggcgaaaagtctagtttagcc 23565121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 23565335 - 23565393
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  23565335 aatagggggtcaaaattgcaacattttaaaacatagggggcgaaaagtctagtttagcc 23565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 8802645 - 8802708
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 71  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| |  ||||||||||||||    
T  8802645 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtaaagtttagccaataa 8802708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 33895619 - 33895686
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaattt 75  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||| || ||||||||| | ||||||    
T  33895619 aataggggaccaaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagcctaaaaattt 33895686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 19391445 - 19391388
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| || |||||||||    
T  19391445 aataggggaccaaaattgcaacattttgaaacata-ggggcgaaaagtgcagtttagcc 19391388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19392812 - 19392870
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  19392812 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 19392870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 21929905 - 21929847
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||    
T  21929905 aatagggagccaaaatcgcaacgttttgaaacatagggggcgaaaaatgcactttagcc 21929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 12723507 - 12723567
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || ||||| |||||    
T  12723507 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttggccaa 12723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 12723319 - 12723264
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||| || ||||||    
T  12723319 aatagggggtcaaaattgcaacgttttgaaacatagggggtgaaaagtgcagttta 12723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 22452231 - 22452176
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||| || ||||||    
T  22452231 aatagggggctaaaattgcaacattttaaaatatagggggcgaaaagtgcagttta 22452176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 30784323 - 30784268
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||| ||||||||||||||||||||||| |||||||| |||| || ||||||    
T  30784323 aataggggaccaaaattgcaacattttgaaacctagggggcaaaaagtgaagttta 30784268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 30784510 - 30784569
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||||| || ||||||||||    
T  30784510 aataaggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcca 30784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18881747 - 18881805
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||||| ||| ||||||||    
T  18881747 aatagggggtcaaaattgcaacattataaaacttagggggcgaaaagtgttgtttagcc 18881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19924511 - 19924569
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| ||||||||||||| |||||||| ||||||||||| |||||| || |||||||||    
T  19924511 aataaggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcc 19924569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 21930047 - 21930105
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  21930047 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 21930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 44147030 - 44146972
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| | | ||||||||| || |||||||||    
T  44147030 aatagggggccaaaatcgcaacattttgaaacttggagggcgaaaagtgaagtttagcc 44146972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 44147216 - 44147274
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| || | |||||||    
T  44147216 aatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcc 44147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19924323 - 19924263
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||| |||||||||||||||||||||| |||| ||| ||||||||| ||  ||||||||||    
T  19924323 aataaggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagccaa 19924263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 21666519 - 21666579
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| |||||||||||||||  ||||||| |||| || |||| ||||||    
T  21666519 aatagggggccaaaatcgcaacattttgaaactaagggggcaaaaagtgcagttcagccaa 21666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 3819541 - 3819487
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||||||||| || |||| |||||||| | |||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggg-gaaaaatgcactttagccaa 3819487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 33895424 - 33895373
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||||| |||| ||| ||||||||| || |||||||||||    
T  33895424 ccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 33895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 35795273 - 35795230
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||    
T  35795273 tagggggtcaaaattgcaactttttgaaacatagggggccaaaa 35795230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38630113 - 38630058
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    ||||||||  |||||| ||||||||||||||| ||| |||||||||||| ||||||    
T  38630113 aataggggatcaaaatcgcaacattttgaaacttagagggcgaaaaatgaagttta 38630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 3380257 - 3380199
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| ||||||||||||||| ||  ||| |||||||| |||||||||    
T  3380257 aatagggagccaaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4518927 - 4518869
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||||| || | |||||||    
T  4518927 aatagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcc 4518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 4519113 - 4519171
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| ||||||||||||||| ||| || |||||| || |||||||||    
T  4519113 aatagggagccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 4519171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 8802458 - 8802400
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| ||||||| ||| |||||| || | |||||||    
T  8802458 aatagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagcc 8802400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 17648301 - 17648243
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| ||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  17648301 aatagggagccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 17648243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 17648496 - 17648546
Alignment:
Q  16 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| ||||||||||||||| |||||||||||||| || || ||||||    
T  17648496 gccaaaactgcaacattttgaaagatagggggcgaaaagtgcagattagcc 17648546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 34602069 - 34602027
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaa 34602027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 34602435 - 34602477
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||||||||||||| |||||||||||||| || |||||    
T  34602435 agggggccaaaattgcaactttttgaaacataggaggtgaaaa 34602477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 18252461 - 18252401
Alignment:
Q  8 aatagggggccaaaattgcaacattttg--aaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||   |||| ||||||||||||||||| ||||||||    
T  18252461 aatagggggtcaaaatagcaacatttttttaaacttagggggcgaaaaatgttgtttagcc 18252401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 27453181 - 27453136
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 56  Q
    ||||||||||| | ||||| ||||||||||||||||| ||||||||    
T  27453181 agggggccaaattcgcaactttttgaaacatagggggtgaaaaatg 27453136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 45163718 - 45163763
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaat 55  Q
    |||||||||||||| ||||| | |||||||||||||||| ||||||    
T  45163718 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaaat 45163763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 31494156 - 31494221
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 73  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  31494156 aatagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagccaataaat 31494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 36746749 - 36746808
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  36746749 aatagggggccaaaattgcaacattttaaaacata-ggggcgaaaagtgtagtttagccaa 36746808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 19195272 - 19195214
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  19195272 aataggggaccaaaattgcaatattttgaaacatagggggtgaaaaatgcagtttagcc 19195214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 21690474 - 21690416
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  21690474 aataaggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcc 21690416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 48176021 - 48175962
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaa-tgtagtttagcc 66  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||    
T  48176021 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttagcc 48175962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 8527040 - 8527098
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| || | |||||||    
T  8527040 aatagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcc 8527098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 11843236 - 11843178
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || || |||||||||    
T  11843236 aatagggagccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 11843178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 20636864 - 20636922
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | |||||||    
T  20636864 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 20636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 21224411 - 21224354
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  21224411 aataggggaccaaaattgcaacattttgaaacata-agggcgaaaaatgcagtttagcc 21224354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 27869254 - 27869196
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | |||||||    
T  27869254 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 39182179 - 39182237
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  39182179 aatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcc 39182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 42271578 - 42271636
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || | |||||||    
T  42271578 aatagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcc 42271636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 48176208 - 48176266
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  48176208 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 48176266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 2331273 - 2331322
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||    
T  2331273 ccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2331322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 3562491 - 3562446
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||    
T  3562491 aatagggggccaaaatcgcaacattttgaaacatagggagcgaaaa 3562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 17305822 - 17305761
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 69  Q
    |||||||||||||||| ||||||||||||||| ||| || |||||| || ||||||||||||    
T  17305822 aatagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagccaat 17305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42271391 - 42271331
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||| ||||||||| ||||||||||||||| ||| |||||||||||| | |||||||||    
T  42271391 aataggaggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaaatttagccaa 42271331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 18754512 - 18754567
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  18754512 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtggagttta 18754567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 5490924 - 5490966
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  5490924 agggggccaaaattgcaactttttgaaacatagggggtgaaaa 5490966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19919847 - 19919905
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  19919847 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 19919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 24597575 - 24597517
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| || | |||||||    
T  24597575 aatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagcc 24597517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 31493969 - 31493911
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| | ||||||||||||| |||||| |||||| || |||||||||    
T  31493969 aatagggggccaaaatcgtaacattttgaaacttaggggccgaaaagtggagtttagcc 31493911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 14624661 - 14624608
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| |||| |||||||||| |||||| |||||| ||||||||||||    
T  14624661 ggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagtttagcc 14624608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 10655575 - 10655634
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||| | |||||||||||||||||||||||| | |||||||| || |||||||||||    
T  10655575 aataggggacaaaaattgcaacattttgaaacata-gaggcgaaaagtgcagtttagccaa 10655634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 13577845 - 13577789
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 64  Q
    |||||||||||||||| ||||||||||||||||||| | |||| || || |||||||    
T  13577845 aatagggggccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtttag 13577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17306016 - 17306067
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||||||||||||||||| ||||||| |||||||||||||  |||||||    
T  17306016 ggggccaaaattgcaacattttaaaacata-ggggcgaaaaatgcggtttagc 17306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 19195459 - 19195519
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| ||||||||||||||||| |||| ||| ||| ||||| || |||||||||||    
T  19195459 aatagggggtcaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagccaa 19195519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 24597761 - 24597821
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||| || |||||||||||    
T  24597761 aatagggggacaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 24597821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 26385507 - 26385547
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggc 48  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  26385507 aatagggggccaaaatcgcaacattttgaaacttagggggc 26385547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 41452495 - 41452543
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 56  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||    
T  41452495 aatagggggccaaaattacaacattttgaaacttagaggacgaaaaatg 41452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 10655388 - 10655329
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    |||| |||||||||| ||||||||||| |||| |||||||| |||| || ||||||||||    
T  10655388 aataaggggccaaaactgcaacattttaaaacttagggggcaaaaagtggagtttagcca 10655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 21224601 - 21224656
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  21224601 agggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 21224656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 13578030 - 13578088
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||| ||| |||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  13578030 aatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 13578088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 15681878 - 15681936
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||| ||||||||| ||||||||||||||| |||||| | |||| || |||||||||||    
T  15681878 taggaggccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagccaa 15681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 20636677 - 20636619
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||| ||| |||| |||| || |||||||||    
T  20636677 aatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcc 20636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 20638549 - 20638491
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||| ||| |||| |||| || |||||||||    
T  20638549 aatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcc 20638491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 24448103 - 24448037
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 74  Q
    ||||||||  |||||| |||||||||| |||| | ||||||||||| || ||||||||| |||||||    
T  24448103 aataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcctataaatt 24448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2331072 - 2331015
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||| |||||||||||||||||||||| |||| ||| || |||||| || ||||||||    
T  2331072 aataaggggccaaaattgcaacattttaaaacttagaggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 7365279 - 7365234
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||| ||||| | |||||||| ||||||||||||||||||    
T  7365279 aatagggggcaaaaatcgtaacattttaaaacatagggggcgaaaa 7365234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 19919662 - 19919617
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  19919662 aataaggggccaaaatcgcaacattttaaaatatagggggcgaaaa 19919617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 34174028 - 34174065
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacataggggg 47  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  34174028 tagggggccaaaattgcaagattttgaaagataggggg 34174065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3617044 - 3617104
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3617044 aatagggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagccaa 3617104  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 24962199 - 24962259
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||    
T  24962199 aatagggggccaaaactgcaacattttgaaacatagggggcgaaaagtacagtttagccaa 24962259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4059580 - 4059522
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || | |||||||    
T  4059580 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 4059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 28920897 - 28920955
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||    
T  28920897 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 51719181 - 51719123
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| || |||||||||    
T  51719181 aatagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcc 51719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 24750020 - 24750073
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  24750020 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 24750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 43706712 - 43706655
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||    
T  43706712 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 50334776 - 50334719
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||    
T  50334776 aatagggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 50334811 - 50334869
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||    
T  50334811 atagggggccaaaattacaacattttgaaacata-ggggcgaaaaatacagtttagccaa 50334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 2425469 - 2425527
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||| || |||||||||    
T  2425469 aatagggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagcc 2425527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 3616857 - 3616799
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  3616857 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 3616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19078169 - 19078227
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| || || ||||||    
T  19078169 aatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcc 19078227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19126059 - 19126117
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| || || ||||||    
T  19126059 aatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcc 19126117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 24196319 - 24196261
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||| || |||||||||    
T  24196319 aatagagggccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttagcc 24196261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 24196507 - 24196565
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||| || |||||||||    
T  24196507 aatagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcc 24196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 46432274 - 46432216
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || | |||||||    
T  46432274 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 46432216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 16551702 - 16551657
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  16551702 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaa 16551657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 29676137 - 29676072
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 73  Q
    |||| |||||| |||||||||||||||||||| ||| ||||||||| || ||||||||| ||||||    
T  29676137 aatatggggcctaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctataaat 29676072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 48471921 - 48471876
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  48471921 aatagggggccaaaatcgcaacattttgaaacataggggacgaaaa 48471876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 28552363 - 28552299
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 72  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||| || | ||||| |||||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttagtcaataaa 28552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 46432462 - 46432522
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||| || |||||||||| || | |||||||||    
T  46432462 aatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggactttagccaa 46432522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 10685012 - 10685063
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 64  Q
    |||||||||||| ||| |||||||||| |||||||||||||||| |||||||    
T  10685012 ggggccaaaattacaatattttgaaacttagggggcgaaaaatgcagtttag 10685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 4059768 - 4059826
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| ||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  4059768 aatagggggctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4059826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 16972096 - 16972154
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| ||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  16972096 aatagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcc 16972154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 24962011 - 24961953
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  24962011 aatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 24961953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 2657762 - 2657815
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  2657762 ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcc 2657815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 27092906 - 27092853
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| | |||||||||||||||||||||||| || || |||||||||    
T  27092906 ggggccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagcc 27092853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 10684852 - 10684792
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||| | |||||||||||||||| |||| || ||||||||||||  |||||||||||    
T  10684852 aataggggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagccaa 10684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19077984 - 19077924
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||| | ||||||  |||||||| ||||||||||| |||||| ||||||||||||||    
T  19077984 aataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagccaa 19077924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19125874 - 19125814
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||| | ||||||  |||||||| ||||||||||| |||||| ||||||||||||||    
T  19125874 aataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagccaa 19125814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 43706899 - 43706959
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| |||||||||| |||  |||||||| |||| || |||||||||||    
T  43706899 aatagggggccaaaatcgcaacattttaaaaattagggggcaaaaagtggagtttagccaa 43706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 2425283 - 2425224
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    ||||||||| |||||| ||||||||||||||| |||| ||| |||| || ||||||||||    
T  2425283 aatagggggtcaaaatcgcaacattttgaaacttaggtggcaaaaagtggagtttagcca 2425224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 16878931 - 16878993
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaata 70  Q
    |||||||| |||||||  |||||||||||||| |||| |||||||| || ||||||| |||||    
T  16878931 aataggggaccaaaatctcaacattttgaaacttaggtggcgaaaagtgcagtttagacaata 16878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18606929 - 18606987
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||  ||||||||| |||| |||||| |||||| ||||||||||||    
T  18606929 aatagggggtcaaaatcacaacattttaaaacttaggggtcgaaaagtgtagtttagcc 18606987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28919073 - 28919015
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||| ||||||||||| |||||||||||||||||| |||| |||| |  |||||||||    
T  28919073 aatagagggccaaaattacaacattttgaaacatagagggcaaaaagtacagtttagcc 28919015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 30105492 - 30105443
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgt 57  Q
    |||||||||| ||||||||||| |||  |||| |||||||||||||||||    
T  30105492 aatagggggcaaaaattgcaacctttgcaaacttagggggcgaaaaatgt 30105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 43914965 - 43914920
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||||||||| |||  |||| |||||||||||||    
T  43914965 aatagggggccaaaattgcaacctttgcaaacttagggggcgaaaa 43914920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 6285224 - 6285176
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 56  Q
    |||||||| ||||||| ||||||||||||||| ||||| || |||||||    
T  6285224 aataggggaccaaaatcgcaacattttgaaacttagggcgcaaaaaatg 6285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2106 - 2048
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  2106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 47; Significance: 8e-18; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 62064 - 62122
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  62064 aatacggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagcc 62122  T

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Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 19527 - 19585
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| | |||| |||||||| || ||||||||||||| |||||||||    
T  19527 aatagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

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Target: scaffold0025; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 61872 - 61814
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||| || |||||||||    
T  61872 aatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcc 61814  T

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Target: scaffold0025; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19343 - 19283
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||| ||||||||||||||| |||| |||||||| |  |||||||||||    
T  19343 aatagggggtcaaaatcgcaacattttgaaacttaggaggcgaaaagtagagtttagccaa 19283  T

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Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25011980 - 25012038
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  25011980 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 25012038  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 43793689 - 43793631
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||    
T  43793689 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 43793631  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25011793 - 25011733
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||| || |||||||||||    
T  25011793 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtttagccaa 25011733  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4433241 - 4433183
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| || |||||||||    
T  4433241 aataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 4433183  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 5304405 - 5304339
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 74  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||| || | |||||||||||||||    
T  5304405 aatagagggccaaaatcaaaacattttgaaacatagggggcgaaaagtgcactttagccaataaatt 5304339  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 13397921 - 13397979
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||| || |||||||||    
T  13397921 aatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagtttagcc 13397979  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 13394594 - 13394534
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| || | |||||||||    
T  13394594 aatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13394534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 13397733 - 13397673
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| || | |||||||||    
T  13397733 aatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13397673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 13826478 - 13826420
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||| || | |||||||    
T  13826478 aatagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcc 13826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 18259357 - 18259415
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||  ||| ||||||||| || |||||||||    
T  18259357 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagcc 18259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25618842 - 25618900
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| |||||||||||||||||||||| ||| ||||| ||| || |||||||||    
T  25618842 aatagggggtcaaaattgcaacattttgaaacttagagggcgcaaagtgaagtttagcc 25618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35475349 - 35475291
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| |||||||||| |||| ||| |||||||||||| |||||||||    
T  35475349 aatagggagccaaaatcgcaacattttaaaacttagagggcgaaaaatgaagtttagcc 35475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 41877270 - 41877328
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| |||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  41877270 aatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 41877328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 43793876 - 43793934
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| |||| ||| |||| || |||||||||    
T  43793876 aatagggggccaaaatcgcaacattttgaaacttaggcggcaaaaagtggagtttagcc 43793934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 55780445 - 55780387
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||  |||| || ||||||||||||| |||||||||    
T  55780445 aatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55780387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 55844625 - 55844567
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||||||||  |||| || ||||||||||||| |||||||||    
T  55844625 aatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 4357497 - 4357542
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||    
T  4357497 aatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaa 4357542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 15058873 - 15058820
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| |||||||||||||||||||||||| |||| || | |||||||    
T  15058873 ggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagcc 15058820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 45633491 - 45633438
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  45633491 ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcc 45633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4357310 - 4357250
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||| || ||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  4357310 aatagggagctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 4357250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 9397435 - 9397495
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||  ||||||||| |||| ||||||| ||||| || |||||||||||    
T  9397435 aatagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagccaa 9397495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 2931576 - 2931623
Alignment:
Q  19 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||| ||||||||| |||||||||||||||||| || |||||||||    
T  2931576 aaaattacaacattttaaaacatagggggcgaaaagtgcagtttagcc 2931623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 6789207 - 6789262
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||| ||||||||||||||| ||  ||||||||| || |||||||||    
T  6789207 agggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagtttagcc 6789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 27018460 - 27018499
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacataggggg 47  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  27018460 aatagggggtcaaaatcgcaacattttgaaacataggggg 27018499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 5304591 - 5304649
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||| ||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  5304591 aatagagggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 5304649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 6319047 - 6319081
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacata 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  6319047 aataggtggccaaaattgcaacattttgaaacata 6319081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 9195908 - 9195966
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||| ||||||| ||||||||||||||  ||||||||||||| ||  ||||||||    
T  9195908 aataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtggtgtttagcc 9195966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 19232401 - 19232343
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||| |||||||||||||||||| | |||||||||||||| ||| || | |||||||    
T  19232401 aataggaggccaaaattgcaacattataaaacatagggggcggaaagtgcactttagcc 19232343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 19232590 - 19232656
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 74  Q
    |||||| | |||||||  |||||||||||||| |||||||| |||| || ||||||||||| |||||    
T  19232590 aataggtgaccaaaatcacaacattttgaaacttagggggcaaaaagtggagtttagccaaaaaatt 19232656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 25618686 - 25618648
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggg 46  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  25618686 aataggggaccaaaattacaacattttgaaacatagggg 25618648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 47869899 - 47869957
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||  ||||||||||||| ||||||||| |||| || | |||||||    
T  47869899 aatagggggccaaaatcacaacattttgaaatatagggggcaaaaattgcactttagcc 47869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 2931370 - 2931321
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  2931370 ccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 2931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 7035904 - 7035941
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacataggg 45  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  7035904 aatagggggccaaaattgctacattttgaaacctaggg 7035941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17138540 - 17138589
Alignment:
Q  19 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||| |||||||||| |||| ||||||||||||| || |||||||||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagccaa 17138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 20919384 - 20919335
Alignment:
Q  17 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||| ||||||||||||||| |||||| |||||| || |||||||||    
T  20919384 ccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 20919335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 24626462 - 24626527
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 73  Q
    ||||| || |||||||||||||||||| |||| ||||| || |||| || ||||||||| ||||||    
T  24626462 aatagaggtccaaaattgcaacattttaaaacttagggagcaaaaagtgcagtttagcctataaat 24626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 41034880 - 41034925
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||| |||||||||||||||||| ||| ||||||| ||||||    
T  41034880 aataggggaccaaaattgcaacattttaaaatataggggacgaaaa 41034925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4433433 - 4433488
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 69  Q
    ||||||||||| |||||||||| |||| || |||||||||| || ||||||||||||    
T  4433433 ggggccaaaatcgcaacattttaaaactta-ggggcgaaaagtgaagtttagccaat 4433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3019 - 2959
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || | |||||||||    
T  3019 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3206 - 3266
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||| ||  ||||||||||    
T  3206 aatagggggtcaaaattgcaacattttgaaacttagagggcgaaaagtgaggtttagccaa 3266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 25819930 - 25819993
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 71  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||| || ||||||||||||||    
T  25819930 aatagggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagccaataa 25819993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 4597651 - 4597709
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  4597651 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4597709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 14572236 - 14572182
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttt 62  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  14572236 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagttt 14572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 18749155 - 18749097
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||    
T  18749155 aatagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcc 18749097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 26710553 - 26710612
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || ||||||||||    
T  26710553 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcca 26710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 24051067 - 24051009
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  24051067 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 24051009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 32451972 - 32452030
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||| || |||||||||    
T  32451972 aatagggggtcaaaattgcaacattttgaaacataggggacaaaaagtgcagtttagcc 32452030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35102549 - 35102491
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| || | |||||||    
T  35102549 aatagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 35102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 4013911 - 4013968
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||| || ||||||||    
T  4013911 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 4597463 - 4597418
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  4597463 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 4597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 15298730 - 15298778
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 56  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15298730 aataaggggccaaaatcgcaacattttgaaacatagagggcgaaaaatg 15298778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 18749374 - 18749434
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  18749374 aatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25819743 - 25819683
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| ||  ||||||||||    
T  25819743 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagccaa 25819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 32451784 - 32451726
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  32451784 aatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 32451726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 35102713 - 35102767
Alignment:
Q  12 gggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||||||||||||||| ||| ||||||||| || |||| ||||    
T  35102713 gggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcc 35102767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 3118926 - 3118981
Alignment:
Q  11 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||   |||||| |||||||||||||||||||| || |||||||||    
T  3118926 agggggccaaaatcataacattatgaaacatagggggcgaaaagtgcagtttagcc 3118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 8415294 - 8415353
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    ||||||| || ||||| |||||||| | |||||||||||||||||| || ||||||||||    
T  8415294 aatagggagctaaaatcgcaacattataaaacatagggggcgaaaagtgcagtttagcca 8415353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 12291475 - 12291428
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaat 55  Q
    |||| ||||||||||| ||||||||||||||| |||||| ||||||||    
T  12291475 aataaggggccaaaatcgcaacattttgaaacttaggggacgaaaaat 12291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 18791603 - 18791642
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacataggggg 47  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  18791603 aatagggggccaaaatcgcaacattttaaaacataggggg 18791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 4013742 - 4013691
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||| ||||||||||||||||||||||    |||||||||||||||||||||||    
T  4013742 ggggtcaaaattgcaacattttgaaactc--ggggcgaaaaatgtagtttagcc 4013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 14572422 - 14572480
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||||||| || | |||||||    
T  14572422 aatagggggccaaaattgcaatattttaaaacttagagggcgaaaagtggactttagcc 14572480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19176856 - 19176798
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 67  Q
    |||||||  |||||| |||||||||| |||| ||||||||||||||| || ||||||||    
T  19176856 ataggggatcaaaatcgcaacattttcaaacttagggggcgaaaaatatactttagcca 19176798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 27322113 - 27322174
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 72  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||| || | ||||||| |||||    
T  27322113 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctataaa 27322174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 6842327 - 6842384
Alignment:
Q  9 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||| || | |||||||    
T  6842327 atagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 22968404 - 22968457
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| ||||||||||||||| || |||||||||| || | |||||||    
T  22968404 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 22968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 23819989 - 23819936
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||| ||||||||||||||| || |||||||||| || | |||||||    
T  23819989 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 23819936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 27318370 - 27318333
Alignment:
Q  10 tagggggccaaaattgcaacattttgaaacataggggg 47  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  27318370 tagggggccaaaattgcaagattttgaaagataggggg 27318333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 34833970 - 34833925
Alignment:
Q  21 aattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||||||| ||| ||||||||| || |||||||||    
T  34833970 aattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 34833925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15298544 - 15298500
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaa 52  Q
    |||||||||||||| | ||||||||||||||| ||| ||||||||    
T  15298544 aatagggggccaaactcgcaacattttgaaacttagagggcgaaa 15298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 32682414 - 32682386
Alignment:
Q  25 gcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||||||||||||||||    
T  32682414 gcaacattttgaaacatagggggcgaaaa 32682386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5708 - 5650
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  5708 aataggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 5895 - 5953
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| |||| |||||||||| ||| || |||||| || |||||||||    
T  5895 aatagggggccaaaatcgcaatattttgaaacttagaggccgaaaagtgaagtttagcc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 66424 - 66477
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  66424 ggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcc 66477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 66242 - 66183
Alignment:
Q  8 aatagggggccaaaa-ttgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||| || |||||||||    
T  66242 aatagggggccaaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 66183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 2236 - 2294
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||| || |||||||||    
T  2236 aatagagggccaaaattgcaacattttaaaacatggggggcgaaaagtgcagtttagcc 2294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 2055 - 1995
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||||| |||||||||| |||| ||| ||||||||| |  |||||||||||    
T  2055 aatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtaaagtttagccaa 1995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 43882 - 43827
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||| || ||||||    
T  43882 aatagggggccaaaattgaaacattttgaaacttaggaggcgaaaagtgcagttta 43827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 44067 - 44106
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacataggggg 47  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  44067 aatagggggccaaaattacaacattttgaaacttaggggg 44106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 6076 - 6121
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 53  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||    
T  6076 aatagggggccaaaatcgcaacatttaaaaacatagggggcgaaaa 6121  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 455274 - 455331
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    |||||||||||||||| ||||||||||||||| |||||  |||||| || ||||||||    
T  455274 aatagggggccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtttagc 455331  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 141996 - 141943
Alignment:
Q  15 ggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||||| | ||||||||||| |||||| || |||||||||||    
T  141996 ggccaaaattgcaacattataaaacataggggacgaaaagtgcagtttagccaa 141943  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 142192 - 142247
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 63  Q
    |||||||| |||||||||||||||||| |||| ||| ||||||||| || ||||||    
T  142192 aataggggaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagttta 142247  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 250576 - 250516
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    ||||||||| |||| | |||||||||| |||||||||||||||||| || | |||||||||    
T  250576 aatagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 250516  T

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Target: scaffold0174 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 29938 - 29993
Alignment:
Q  13 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 68  Q
    |||||||||||||||||||||| |||| || ||| | |||| ||||||||||||||    
T  29938 ggggccaaaattgcaacattttaaaacttaagggacaaaaagtgtagtttagccaa 29993  T

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Target: scaffold1875 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 814 - 756
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    |||||||||||||||| ||||||||| ||||| || |||| ||||| || |||||||||    
T  814 aatagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagcc 756  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 49904 - 49962
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  49904 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 49962  T

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Target: scaffold0062; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 62443 - 62501
Alignment:
Q  8 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 66  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  62443 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 62501  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 112380 - 112429
Alignment:
Q  16 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 65  Q
    ||||||||||||||||||| |||| | |||| |||||| |||||||||||    
T  112380 gccaaaattgcaacattttaaaactttggggacgaaaagtgtagtttagc 112429  T

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