View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3071_low_31 (Length: 241)
Name: NF3071_low_31
Description: NF3071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3071_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 7958379 - 7958602
Alignment:
| Q |
1 |
tgtttttacattatatcacacttnnnnnnnngactcgtaataatgtcatttgcaacaaaccatagtcatgcatgccaacatgttacacaaacatattgtt |
100 |
Q |
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| T |
7958379 |
tgtttttacattatatcacacttaaaaaaaagactcgtaataatgtcatttgcaacaaaccatagtcatgcatgccaacatgttacacaaacatattgtt |
7958478 |
T |
|
| Q |
101 |
atgttggttttctaccaaacaaccatctttctcattctgtatcacacggaaaaagtcacactcacacaagcaaatgatagctgcataaatggtcctaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7958479 |
atgttggttttctaccaaacaaccatctttctcattctgtatcacacggaaaaagtcacactcacacaagcaaatgatagctgcataaatggtcctaaat |
7958578 |
T |
|
| Q |
201 |
ttttgacagaaaactatttcttag |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
7958579 |
ttttgacagaaaactatttcttag |
7958602 |
T |
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