View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3074_high_62 (Length: 250)
Name: NF3074_high_62
Description: NF3074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3074_high_62 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37601625 - 37601389
Alignment:
| Q |
1 |
agcaacttagttagaacgggttccttcttgtatgtgaaagttgtaggtaattgattgaatgagcttatttttctttgtttcttgttgtacttgtactagc |
100 |
Q |
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| T |
37601625 |
agcaacttagttagaacgggttccttcttgtatgtgaaagttgtaggtaattgattgaatgagcttatttttctttgtttcttgttgtacttgtactagc |
37601526 |
T |
|
| Q |
101 |
tgtttgcgtgcatctatctattttatggtttccaaattccaacgcgcaaaggtttgctgaaaaatatgattgggttttagatgccctttattgcaagtta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37601525 |
tgtttgcgtgcatctatctattttatggtttccaaattccaacgcgcaaaggtttgctgaaaaatatgattgggttttagatgccctttattgcaagtta |
37601426 |
T |
|
| Q |
201 |
ctactacaattactacaattggacttccaataatatgcct |
240 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
37601425 |
---ctacaattactacaattggacttccaataatatgcct |
37601389 |
T |
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