View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3074_low_54 (Length: 296)

Name: NF3074_low_54
Description: NF3074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3074_low_54
NF3074_low_54
[»] chr8 (53 HSPs)
chr8 (1-279)||(2797068-2797345)
chr8 (7-252)||(2874916-2875159)
chr8 (1-125)||(2195496-2195620)
chr8 (1-164)||(14689988-14690152)
chr8 (158-248)||(3160074-3160164)
chr8 (158-254)||(2889554-2889650)
chr8 (1-115)||(10728885-10729001)
chr8 (1-133)||(42412330-42412462)
chr8 (1-133)||(5392077-5392209)
chr8 (1-129)||(33743804-33743933)
chr8 (8-128)||(45420890-45421011)
chr8 (1-163)||(11637168-11637331)
chr8 (1-108)||(40077721-40077829)
chr8 (6-164)||(14748619-14748780)
chr8 (3-164)||(27973602-27973763)
chr8 (3-164)||(28030871-28031032)
chr8 (12-128)||(1494199-1494316)
chr8 (63-168)||(15020860-15020962)
chr8 (6-134)||(27868271-27868399)
chr8 (67-164)||(32231301-32231398)
chr8 (45-134)||(36011939-36012028)
chr8 (1-163)||(8418221-8418381)
chr8 (1-108)||(29638329-29638437)
chr8 (1-96)||(41759613-41759709)
chr8 (12-116)||(44225885-44225989)
chr8 (1-39)||(17005973-17006011)
chr8 (1-39)||(17571237-17571275)
chr8 (1-166)||(28791336-28791501)
chr8 (6-134)||(29451382-29451511)
chr8 (1-50)||(41726549-41726598)
chr8 (1-95)||(7258351-7258446)
chr8 (7-128)||(9734120-9734240)
chr8 (1-39)||(1230403-1230441)
chr8 (1-39)||(15559171-15559209)
chr8 (1-42)||(5878264-5878305)
chr8 (89-158)||(8840444-8840512)
chr8 (5-50)||(15020704-15020749)
chr8 (13-163)||(26677113-26677265)
chr8 (1-131)||(39171571-39171700)
chr8 (6-50)||(886478-886522)
chr8 (1-53)||(37459378-37459430)
chr8 (1-49)||(39998191-39998239)
chr8 (170-268)||(15131764-15131862)
chr8 (1-39)||(25174626-25174664)
chr8 (1-39)||(38201432-38201470)
chr8 (1-34)||(5962519-5962552)
chr8 (67-128)||(8566065-8566126)
chr8 (10-39)||(14953974-14954003)
chr8 (1-38)||(28802795-28802832)
chr8 (5-125)||(32241379-32241499)
chr8 (1-34)||(44615411-44615444)
chr8 (6-38)||(3384567-3384599)
chr8 (3-39)||(27875183-27875219)
[»] chr7 (47 HSPs)
chr7 (1-164)||(32776011-32776175)
chr7 (1-163)||(37264341-37264502)
chr7 (3-166)||(29996942-29997106)
chr7 (7-165)||(32346552-32346708)
chr7 (6-161)||(33773962-33774117)
chr7 (1-140)||(34064243-34064382)
chr7 (22-135)||(6697130-6697243)
chr7 (1-128)||(32971969-32972097)
chr7 (1-165)||(14648831-14648998)
chr7 (1-125)||(3667832-3667956)
chr7 (1-127)||(2849283-2849409)
chr7 (13-148)||(8149999-8150134)
chr7 (1-100)||(28333199-28333298)
chr7 (1-139)||(9658866-9659004)
chr7 (7-140)||(40023667-40023800)
chr7 (67-128)||(47238312-47238373)
chr7 (6-113)||(10355701-10355809)
chr7 (1-108)||(45218129-45218237)
chr7 (1-116)||(37496359-37496476)
chr7 (1-129)||(9602889-9603018)
chr7 (1-129)||(9830460-9830589)
chr7 (10-116)||(23111052-23111159)
chr7 (1-115)||(36070133-36070247)
chr7 (1-95)||(38589762-38589857)
chr7 (5-83)||(18731471-18731550)
chr7 (196-253)||(11816755-11816812)
chr7 (1-81)||(27337871-27337952)
chr7 (1-38)||(29257575-29257612)
chr7 (7-114)||(2842018-2842125)
chr7 (7-108)||(5068272-5068371)
chr7 (7-39)||(6591582-6591614)
chr7 (198-254)||(11820349-11820405)
chr7 (6-50)||(24288456-24288500)
chr7 (1-100)||(43007922-43008022)
chr7 (5-40)||(25778776-25778811)
chr7 (73-156)||(39143597-39143680)
chr7 (5-129)||(7425828-7425953)
chr7 (66-116)||(21446530-21446580)
chr7 (1-39)||(39343712-39343750)
chr7 (6-39)||(19687992-19688025)
chr7 (1-38)||(23186185-23186222)
chr7 (1-38)||(33584591-33584628)
chr7 (6-39)||(34001900-34001933)
chr7 (5-38)||(38181916-38181949)
chr7 (12-40)||(11730827-11730855)
chr7 (67-135)||(35641817-35641885)
chr7 (6-38)||(37490660-37490692)
[»] chr6 (19 HSPs)
chr6 (1-163)||(15371780-15371942)
chr6 (1-157)||(15355603-15355759)
chr6 (1-163)||(15325175-15325337)
chr6 (6-126)||(15321179-15321299)
chr6 (1-163)||(33921386-33921548)
chr6 (1-163)||(31075841-31076003)
chr6 (6-128)||(15351335-15351457)
chr6 (5-166)||(16126243-16126405)
chr6 (1-163)||(34803621-34803786)
chr6 (13-160)||(20383885-20384032)
chr6 (1-109)||(3874020-3874129)
chr6 (1-76)||(33017947-33018023)
chr6 (29-114)||(20027638-20027724)
chr6 (1-50)||(2310318-2310367)
chr6 (1-50)||(4552937-4552986)
chr6 (105-165)||(34703735-34703794)
chr6 (1-34)||(30063995-30064028)
chr6 (14-97)||(9354422-9354506)
chr6 (7-39)||(34915854-34915886)
[»] chr4 (59 HSPs)
chr4 (1-163)||(5499349-5499508)
chr4 (1-165)||(28330822-28330987)
chr4 (67-167)||(41594760-41594860)
chr4 (1-164)||(46958750-46958911)
chr4 (5-163)||(20964204-20964363)
chr4 (1-126)||(38319939-38320065)
chr4 (5-128)||(42132845-42132971)
chr4 (1-140)||(53848674-53848814)
chr4 (6-134)||(29990416-29990546)
chr4 (14-163)||(18872571-18872718)
chr4 (7-145)||(3502992-3503128)
chr4 (59-126)||(4485952-4486019)
chr4 (1-166)||(8759807-8759973)
chr4 (1-139)||(13529890-13530028)
chr4 (6-133)||(49448874-49448999)
chr4 (63-163)||(25902378-25902478)
chr4 (1-163)||(32949764-32949928)
chr4 (1-163)||(22872303-22872467)
chr4 (61-145)||(3511927-3512012)
chr4 (6-133)||(4360355-4360482)
chr4 (6-125)||(41436514-41436633)
chr4 (1-128)||(48400583-48400710)
chr4 (1-128)||(49218734-49218861)
chr4 (1-83)||(38614960-38615042)
chr4 (7-128)||(20294049-20294170)
chr4 (1-50)||(36047130-36047179)
chr4 (5-108)||(42051627-42051731)
chr4 (6-93)||(44633190-44633277)
chr4 (6-128)||(22020463-22020584)
chr4 (1-39)||(29550768-29550806)
chr4 (1-39)||(37315963-37316001)
chr4 (9-109)||(13719811-13719912)
chr4 (66-163)||(32324354-32324451)
chr4 (1-50)||(39052931-39052980)
chr4 (1-38)||(41710186-41710223)
chr4 (59-100)||(53101870-53101911)
chr4 (66-134)||(1920823-1920890)
chr4 (6-133)||(17237076-17237203)
chr4 (1-116)||(38160116-38160231)
chr4 (78-163)||(47277596-47277683)
chr4 (71-165)||(37315836-37315930)
chr4 (6-83)||(3505755-3505832)
chr4 (1-39)||(10099766-10099804)
chr4 (1-129)||(34790902-34791031)
chr4 (1-39)||(54217370-54217408)
chr4 (5-38)||(1796284-1796317)
chr4 (1-38)||(42544237-42544274)
chr4 (14-83)||(47386218-47386287)
chr4 (1-38)||(49306615-49306652)
chr4 (79-116)||(54217478-54217515)
chr4 (2-38)||(8295058-8295094)
chr4 (6-38)||(26799258-26799290)
chr4 (6-38)||(29644388-29644420)
chr4 (1-108)||(35029063-35029171)
chr4 (6-100)||(37786994-37787087)
chr4 (59-116)||(38838707-38838766)
chr4 (6-125)||(41203770-41203889)
chr4 (6-38)||(54729526-54729558)
chr4 (1-49)||(55360379-55360427)
[»] chr1 (71 HSPs)
chr1 (1-163)||(29756059-29756222)
chr1 (1-164)||(29225781-29225943)
chr1 (5-129)||(37541064-37541189)
chr1 (1-164)||(10587498-10587661)
chr1 (1-128)||(26583756-26583884)
chr1 (5-163)||(29225322-29225484)
chr1 (14-174)||(50926788-50926949)
chr1 (1-163)||(26924037-26924200)
chr1 (70-165)||(40988448-40988542)
chr1 (1-161)||(46363329-46363491)
chr1 (1-116)||(27932797-27932913)
chr1 (29-148)||(7224457-7224576)
chr1 (6-87)||(25819340-25819421)
chr1 (1-125)||(2571391-2571514)
chr1 (1-164)||(24131317-24131480)
chr1 (1-90)||(37280987-37281077)
chr1 (12-116)||(16956582-16956687)
chr1 (1-108)||(27209939-27210047)
chr1 (21-163)||(3160604-3160747)
chr1 (1-116)||(37925206-37925326)
chr1 (6-163)||(34813950-34814107)
chr1 (6-75)||(45305886-45305955)
chr1 (5-164)||(11425786-11425945)
chr1 (5-108)||(36232761-36232865)
chr1 (5-163)||(4466072-4466230)
chr1 (1-83)||(14352594-14352677)
chr1 (5-163)||(16040109-16040267)
chr1 (7-157)||(46273194-46273345)
chr1 (6-80)||(29678859-29678933)
chr1 (1-116)||(40754378-40754493)
chr1 (5-163)||(49662675-49662832)
chr1 (1-49)||(2886199-2886247)
chr1 (1-48)||(12267664-12267711)
chr1 (1-87)||(33149301-33149388)
chr1 (1-39)||(31798446-31798484)
chr1 (5-87)||(35622773-35622855)
chr1 (1-39)||(51749225-51749263)
chr1 (68-165)||(26760372-26760469)
chr1 (1-38)||(28839367-28839404)
chr1 (28-108)||(36326177-36326258)
chr1 (1-50)||(37495857-37495906)
chr1 (7-87)||(46496052-46496133)
chr1 (1-50)||(51049536-51049585)
chr1 (5-53)||(2219476-2219524)
chr1 (1-85)||(19348991-19349074)
chr1 (7-164)||(25983550-25983702)
chr1 (59-134)||(39420673-39420749)
chr1 (1-53)||(52382414-52382466)
chr1 (3-38)||(3555598-3555633)
chr1 (1-87)||(17724707-17724794)
chr1 (1-126)||(27831874-27831997)
chr1 (79-134)||(34332217-34332271)
chr1 (59-133)||(42309517-42309589)
chr1 (5-134)||(5442372-5442501)
chr1 (72-134)||(13409724-13409786)
chr1 (7-128)||(21304760-21304880)
chr1 (7-87)||(28706616-28706698)
chr1 (9-39)||(30903269-30903299)
chr1 (1-39)||(34877132-34877170)
chr1 (1-39)||(40061837-40061875)
chr1 (1-39)||(44580544-44580582)
chr1 (1-38)||(13500772-13500809)
chr1 (6-39)||(27391380-27391413)
chr1 (1-115)||(31634261-31634371)
chr1 (1-38)||(32348246-32348283)
chr1 (66-163)||(35946936-35947032)
chr1 (1-38)||(43895875-43895912)
chr1 (7-48)||(50086043-50086084)
chr1 (1-128)||(32587793-32587920)
chr1 (7-39)||(45889290-45889322)
chr1 (5-80)||(47293599-47293675)
[»] chr5 (48 HSPs)
chr5 (1-163)||(35988662-35988824)
chr5 (5-163)||(25111067-25111224)
chr5 (5-163)||(25170158-25170315)
chr5 (7-163)||(5147413-5147570)
chr5 (1-128)||(13016316-13016443)
chr5 (5-163)||(25108605-25108762)
chr5 (5-163)||(25167697-25167854)
chr5 (1-128)||(13087694-13087821)
chr5 (5-163)||(16926006-16926167)
chr5 (1-160)||(6629316-6629473)
chr5 (1-128)||(39060903-39061034)
chr5 (8-128)||(42818938-42819059)
chr5 (5-163)||(4475278-4475434)
chr5 (1-128)||(31196347-31196475)
chr5 (1-164)||(38978932-38979096)
chr5 (2-134)||(39212501-39212630)
chr5 (1-128)||(11099430-11099557)
chr5 (1-53)||(15898219-15898271)
chr5 (1-116)||(31090332-31090448)
chr5 (5-163)||(5357735-5357893)
chr5 (16-127)||(4194975-4195088)
chr5 (1-133)||(16283535-16283667)
chr5 (72-171)||(72030-72127)
chr5 (1-128)||(15564845-15564968)
chr5 (4-50)||(4044508-4044554)
chr5 (1-38)||(35334569-35334606)
chr5 (2-50)||(5072979-5073027)
chr5 (7-39)||(7311222-7311254)
chr5 (1-108)||(10044696-10044804)
chr5 (170-253)||(41815420-41815503)
chr5 (1-40)||(72146-72185)
chr5 (1-39)||(6173022-6173060)
chr5 (105-163)||(15898610-15898668)
chr5 (6-56)||(20189925-20189975)
chr5 (5-82)||(36006890-36006968)
chr5 (1-38)||(13135781-13135818)
chr5 (1-38)||(17242997-17243034)
chr5 (6-39)||(19889575-19889608)
chr5 (6-39)||(25344780-25344813)
chr5 (1-38)||(33988228-33988265)
chr5 (1-38)||(39183670-39183707)
chr5 (5-38)||(42575681-42575714)
chr5 (1-33)||(146748-146780)
chr5 (6-34)||(7179527-7179555)
chr5 (6-38)||(8369739-8369771)
chr5 (58-98)||(19889541-19889581)
chr5 (7-39)||(26330282-26330314)
chr5 (6-38)||(36446730-36446762)
[»] chr2 (48 HSPs)
chr2 (6-163)||(314460-314618)
chr2 (1-109)||(31592578-31592686)
chr2 (1-106)||(25604389-25604493)
chr2 (8-164)||(13026602-13026762)
chr2 (1-128)||(2048320-2048447)
chr2 (1-113)||(40710605-40710717)
chr2 (18-164)||(12949880-12950026)
chr2 (4-128)||(9724909-9725033)
chr2 (1-128)||(6972492-6972619)
chr2 (3-134)||(5425887-5426020)
chr2 (5-126)||(13222100-13222222)
chr2 (3-108)||(18181184-18181290)
chr2 (6-100)||(44424244-44424337)
chr2 (162-241)||(41849256-41849335)
chr2 (6-127)||(9472455-9472576)
chr2 (1-108)||(18460516-18460624)
chr2 (1-108)||(24356139-24356247)
chr2 (1-116)||(3199926-3200039)
chr2 (1-39)||(26273787-26273825)
chr2 (1-153)||(38872848-38872999)
chr2 (1-133)||(2427388-2427521)
chr2 (1-50)||(43427116-43427165)
chr2 (5-100)||(1908473-1908569)
chr2 (7-134)||(6213796-6213923)
chr2 (1-167)||(7213503-7213669)
chr2 (6-128)||(43950400-43950522)
chr2 (6-75)||(4794606-4794676)
chr2 (7-100)||(8550621-8550715)
chr2 (8-165)||(27001594-27001752)
chr2 (12-128)||(928490-928606)
chr2 (70-134)||(14384057-14384121)
chr2 (6-94)||(19515914-19516001)
chr2 (9-140)||(8385111-8385242)
chr2 (7-50)||(31348545-31348588)
chr2 (1-48)||(39166728-39166775)
chr2 (6-56)||(7649999-7650049)
chr2 (1-39)||(10069626-10069664)
chr2 (170-268)||(32200640-32200737)
chr2 (72-133)||(32556272-32556330)
chr2 (1-50)||(7931526-7931575)
chr2 (6-39)||(39095664-39095697)
chr2 (10-39)||(44024755-44024784)
chr2 (5-38)||(44534525-44534558)
chr2 (73-133)||(883100-883159)
chr2 (6-38)||(5212000-5212032)
chr2 (5-37)||(6685706-6685738)
chr2 (6-38)||(41436112-41436144)
chr2 (3-39)||(43056405-43056441)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-157)||(593-749)
[»] chr3 (34 HSPs)
chr3 (1-125)||(9218173-9218297)
chr3 (5-165)||(44218949-44219108)
chr3 (7-163)||(30261420-30261574)
chr3 (1-164)||(39329665-39329829)
chr3 (6-164)||(53583476-53583634)
chr3 (1-100)||(41287290-41287390)
chr3 (1-125)||(42547061-42547185)
chr3 (1-163)||(1923118-1923275)
chr3 (66-164)||(7886174-7886270)
chr3 (1-126)||(46194160-46194285)
chr3 (16-135)||(45267168-45267285)
chr3 (1-165)||(48409612-48409778)
chr3 (1-108)||(51164980-51165088)
chr3 (1-108)||(54021429-54021537)
chr3 (7-109)||(53754034-53754137)
chr3 (89-163)||(36315651-36315725)
chr3 (1-50)||(1334811-1334860)
chr3 (67-134)||(24618873-24618940)
chr3 (7-80)||(29858864-29858938)
chr3 (83-164)||(39144770-39144852)
chr3 (5-38)||(21296545-21296578)
chr3 (5-97)||(21585392-21585485)
chr3 (1-50)||(53051054-53051103)
chr3 (7-39)||(49122175-49122207)
chr3 (63-134)||(47684832-47684902)
chr3 (1-35)||(40732471-40732505)
chr3 (1-38)||(15280633-15280670)
chr3 (1-38)||(26134745-26134782)
chr3 (20-109)||(38524263-38524352)
chr3 (72-133)||(51636843-51636903)
chr3 (5-128)||(9017833-9017956)
chr3 (6-38)||(14756156-14756188)
chr3 (2-38)||(46786023-46786059)
chr3 (6-38)||(52325210-52325242)
[»] scaffold0262 (1 HSPs)
scaffold0262 (7-163)||(12352-12509)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-165)||(10704-10870)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-164)||(352379-352540)
[»] scaffold0685 (1 HSPs)
scaffold0685 (1-115)||(6365-6479)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-87)||(5846-5933)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-39)||(171254-171292)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-39)||(220021-220059)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-38)||(26641-26678)
[»] scaffold0155 (1 HSPs)
scaffold0155 (67-170)||(7831-7932)


Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 2797068 - 2797345
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2797068 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 2797167  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataagttttatataggttttggacaccagtccaaggag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2797168 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataagtttta-ataggttttggacaccagtccaaggag 2797266  T
Q  201 tgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtcggacaccgcgacacgagaggggatgg 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2797267 tgtcaaaataaaggagaaaaccatttatttagtacacttgtctgacacgtgtcggacaccacgacacgagaggggatgg 2797345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 2875159 - 2874916
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||  ||||||||||||||||||||||||||||| |    
T  2875159 aattcaatatattctactttgcatttatgataaggaagaatgtatcaataaatgacaaaacactgaa--ccatttttctctttctttcacttattcacct 2875062  T
Q  107 tttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataagttttatataggttttggacaccagtccaaggagtgtcaa 206  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2875061 tttcttaatagttgtgaaatgaacaaaaagcttatttataatgggacggagggagtataagttttatataggtgttggacaccagtccaaggagtgtcaa 2874962  T
Q  207 aataaaggagaaaatcatttatttagtacacttgtctgacacgtgt 252  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  2874961 aataaagaagaaaaccatttatttagtacacttgtctgacacgtgt 2874916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2195496 - 2195620
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || ||  | |||| ||||||||||| |||||||||| ||||||||||||    
T  2195496 actcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctctctttcacttat 2195595  T
Q  101 tcactttttcttaatagttgtgaaa 125  Q
     |||||||||||||||  |||||||    
T  2195596 acactttttcttaatatgtgtgaaa 2195620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14689988 - 14690152
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| || ||  ||| ||  |||||||||||||||||||||| |||||||||||    
T  14689988 actcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcactta 14690087  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | |||||||||||||||  ||||||||||   ||  ||||| ||| ||| |||||||||||||||    
T  14690088 tacactttttcttaataagtgtgaaatgagtcaagggctcagttaaaatgggacggagggagtat 14690152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 3160074 - 3160164
Alignment:
Q  158 ggagtataagttttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacac 248  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  3160074 ggagtataagttttatataggtgttgggcaccagtccaaggagtgtcaaaataaaggagaaaaacatttatttagtacacttgtcggacac 3160164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 2889650 - 2889554
Alignment:
Q  158 ggagtataagttttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtcg 254  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  2889650 ggagtataagttttatagaggtgttgggtaccagtccaaggagtgtcaaaataaaggagaaaaatatttatttagtacacttgtctgacaagtgtcg 2889554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10729001 - 10728885
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaacca--tttttctctttctttcactt 98  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||  | ||  | |||| ||||||||||| |  ||||| ||| ||||||||||    
T  10729001 actcccaattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaacaagacactcaaaactatttttttttctctctttcactt 10728902  T
Q  99 attcactttttcttaat 115  Q
    || ||||||||||||||    
T  10728901 atacactttttcttaat 10728885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 42412462 - 42412330
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||| || || ||||||| | |||| ||||| |||||||||| || ||||||||    
T  42412462 actcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcactta 42412363  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaa 133  Q
    | || ||||||||||||  |||||||||| ||||    
T  42412362 taca-tttttcttaatatgtgtgaaatgagcaaa 42412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 5392077 - 5392209
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||| |||||||||||||||||    |||||||| || ||  |||||||| |||| |||||||||||||||| || |||| |||    
T  5392077 actcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcattta 5392176  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaa 133  Q
    | || ||| ||||||||| |||||||||| ||||    
T  5392177 taca-tttgtcttaataggtgtgaaatgagcaaa 5392209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 33743804 - 33743933
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||| |||||||||||||||| |||||||||||  |||||||||  | ||  ||| ||  ||||||||| |||||||||||| ||||||| |||    
T  33743804 actcacaatttaatatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcattta 33743903  T
Q  100 ttcactttttcttaatagttgtgaaatgaa 129  Q
    | |||||||||||||||  |||||||||||    
T  33743904 tacactttttcttaataagtgtgaaatgaa 33743933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 45421011 - 45420890
Alignment:
Q  8 attcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcactt 106  Q
    |||||||||||| |||||||||||||||||||  ||||||||  ||  |  ||||||   |||||||| |||||||||||| |||||||||||| |||||    
T  45421011 attcaatatattttactttgcatttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttatacactt 45420912  T
Q  107 tttcttaatagttgtgaaatga 128  Q
    ||||||||||  ||||||||||    
T  45420911 tttcttaataagtgtgaaatga 45420890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11637168 - 11637331
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctct-ttctttcactt 98  Q
    |||| ||||||||||||||||||||| ||||||||||||  || |||| |||| ||  || |||| |||||||||| ||||||||||| ||  || ||||    
T  11637168 actctcaattcaatatattctactttacatttatgataaagaataatgtatcaatacttggcaaagacactcaaaa-catttttctctcttaatttactt 11637266  T
Q  99 attcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    || |||||||||||||||  ||||| |||||||||| | ||| ||||||| | | ||||||||||    
T  11637267 atacactttttcttaatatgtgtgacatgaacaaaatgttcacttataatagaatggagggagta 11637331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 40077829 - 40077721
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| |||||||||| ||||||| ||| ||||||| |||    
T  40077829 actccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcattta 40077730  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  40077729 tacactttt 40077721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 14748780 - 14748619
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaacc--atttttctctttctttcacttattc 102  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  | ||  ||| || | |||||||| ||  |||| ||||| |||||||||||| |    
T  14748780 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcaaacccatatttctctctctctttcacttatac 14748681  T
Q  103 actttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    ||||||||||||||  ||| ||||||   ||  ||||| ||| ||| |||||||||||||||    
T  14748680 actttttcttaataagtgtaaaatgagtcaagggctcagttaaaatgggacggagggagtat 14748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 27973763 - 27973602
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttatt 101  Q
    |||||||||||| ||||||||||||||||||||||||     |||| |||| ||  |||||| |||||| |||||||||||||||  || |||||| ||     
T  27973763 tcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaata 27973664  T
Q  102 cactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    || ||||||||||||  |||||||||| ||||| ||||| ||| | | |||||||| ||||||    
T  27973663 ca-tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggagagagtat 27973602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 28031032 - 28030871
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttatt 101  Q
    |||||||||||| ||||||||||||||||||||||||     |||| |||| ||  |||||| |||||| |||||||||||||||  || |||||| ||     
T  28031032 tcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaata 28030933  T
Q  102 cactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    || ||||||||||||  |||||||||| ||||| ||||| ||| | | |||||||| ||||||    
T  28030932 ca-tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggagagagtat 28030871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 1494316 - 1494199
Alignment:
Q  12 aatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcactttttc 110  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||| ||| ||   ||||||||| ||||||||||  |||||||| ||| || |||| |    
T  1494316 aatatattctactttgcatttatgataaagaagaatgcatcaataattgataagggcactcaaaatcatttttctcactctttcacatatacatttttcc 1494217  T
Q  111 ttaatagttgtgaaatga 128  Q
    ||||||  ||||||||||    
T  1494216 ttaataagtgtgaaatga 1494199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 15020860 - 15020962
Alignment:
Q  63 aaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagt 162  Q
    ||||||||||||| |||||||||||  |||| |||||| || |||| |||||||  |||||||||||||| | ||||| ||| ||| |||||||||||||    
T  15020860 aaaacactcaaaatcatttttctct--ctttaacttatacaatttt-cttaatatatgtgaaatgaacaatatgctcacttaaaatgggacggagggagt 15020956  T
Q  163 ataagt 168  Q
    ||||||    
T  15020957 ataagt 15020962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 27868399 - 27868271
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||||||||||||  |  |||| |||| ||  |||||| |||||  |||||||||||||||  || |||||| || ||     
T  27868399 caattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaataca- 27868301  T
Q  105 tttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||||||||||  |||||||||| |||||    
T  27868300 tttttcttaataagtgtgaaatgagcaaaa 27868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 32231398 - 32231301
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    |||||||||||||||| |||| |||||||||||| || ||||||||||||  ||||||||||   ||  ||||| ||| ||| |||||||||||||||    
T  32231398 cactcaaaaccattttcctctctctttcacttatacattttttcttaataaatgtgaaatgagacaagggctcaattaaaatgggacggagggagtat 32231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 36012028 - 36011939
Alignment:
Q  45 aatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||||||| ||  |||||| |||||||||||||||| ||| | |||||||||||| ||| ||||||||| |  ||||||||||||||||    
T  36012028 aatgcatcaatacttgacaagacactcaaaaccatttctctttctctttcacttatacacattttcttaacatatgtgaaatgaacaaaa 36011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8418381 - 8418221
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||| ||||||||||||| ||||||||||||  || ||||||||| ||  |||||||| || |  || ||||||||||  ||||||| ||||    
T  8418381 actctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttgacaaaa-acactgaatcatttttctc--tctttcatttat 8418285  T
Q  101 tcactttttcttaatagttgtgaaatga-acaaaaagctcatttataattggacggagggagta 163  Q
     |||||||||||||||  ||| |||||| | ||||| |||| || |||| |||||||| |||||    
T  8418284 gcactttttcttaatatgtgttaaatgagaaaaaaaactcacttgtaatgggacggagagagta 8418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29638329 - 29638437
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    ||||| ||||||||||||| |||||| ||||||||||||  || |||| | || ||  |||||||  || |||||||||||||||||||||||||| |||    
T  29638329 actcctaattcaatatattatactttacatttatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttttctctttctttcattta 29638428  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  29638429 tacactttt 29638437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41759709 - 41759613
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcac 96  Q
    ||||||||||||||||||| ||||||| |||||||||||  ||||||||| || ||| ||||||  |||||||||  ||||||| ||| ||||||||    
T  41759709 actcccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattgacaaggacactcaaactcatttttttctctctttcac 41759613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 44225989 - 44225885
Alignment:
Q  12 aatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttct 111  Q
    |||||||||||||||||||||||||| |  | ||||||| || ||  | |||||| | | ||||  ||||||||||||||||||| ||| ||||||||||    
T  44225989 aatatattctactttgcatttatgatgaaaatgaatgcaccaatacttaacaaaatatttaaaattatttttctctttctttcacgtatacactttttct 44225890  T
Q  112 taata 116  Q
    |||||    
T  44225889 taata 44225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17005973 - 17006011
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17005973 actcccaattcaatatattctactttgcatttatgataa 17006011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17571275 - 17571237
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17571275 actcccaattcaatatattctactttgcatttatgataa 17571237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28791336 - 28791501
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||| ||| ||||||||||||  ||||||||| || ||  ||| |||  |||||||||| |||||||||| |||||   |||    
T  28791336 actcccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttacttta 28791435  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    | ||| ||||||||||   ||||||||| | ||   ||||| ||| | | |||||||||||||||||    
T  28791436 tacac-ttttcttaatctgtgtgaaatggaaaactggctcagttaaactgggacggagggagtataa 28791501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 29451382 - 29451511
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat---tc 102  Q
    |||||||||||||| ||||||| |||||||||||| |||||| ||  | ||  ||||||||   ||||||| |||||||||  ||||||| ||||   ||    
T  29451382 caattcaatatattatactttggatttatgataagaaagaatacactaatacttgacaaaatgttcaaaactatttttctc--tctttcatttatacatc 29451479  T
Q  103 actttttcttaatagttgtgaaatgaacaaaa 134  Q
    | ||||||||||||  ||||||||||||||||    
T  29451480 attttttcttaatatgtgtgaaatgaacaaaa 29451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41726549 - 41726598
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  41726549 actcccaattcaatatattctactttacatttatgataaagaagaatgca 41726598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7258446 - 7258351
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttca 95  Q
    |||||||||||||||||||||| ||||||||||||||||  |  |||||| || ||  |||||| | | || ||||||||||||||||||| ||||    
T  7258446 actcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttca 7258351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 9734240 - 9734120
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||| |||||||| |||||||||||||||||||  ||||||||| || ||  ||| || || ||||||| |||||||||||  ||||||| |||| || |    
T  9734240 aatttaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctc--tctttcatttatacatt 9734143  T
Q  106 ttttcttaatagttgtgaaatga 128  Q
    |||| ||||||  ||||||||||    
T  9734142 tttttttaataaatgtgaaatga 9734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1230441 - 1230403
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1230441 actctcaattcaatatattctactttgcatttatgataa 1230403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15559209 - 15559171
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15559209 actcctaattcaatatattctactttgcatttatgataa 15559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5878305 - 5878264
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagta 42  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  5878305 actctcaattcaatatattctactttacatttatgataagta 5878264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 8840444 - 8840512
Alignment:
Q  89 tctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagg 158  Q
    |||||||||||| || ||||||||||||  ||||||||| |||||| ||||| ||||||| |||||||||    
T  8840444 tctttcacttatacaatttttcttaatatgtgtgaaatg-acaaaaggctcacttataatgggacggagg 8840512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15020704 - 15020749
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||    
T  15020704 ccaattcaatatattctactttgcatgtatgataagaaggaatgca 15020749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 26677113 - 26677265
Alignment:
Q  13 atatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaacca-tttttctctttctttcacttattcactttttc 110  Q
    |||||||||||||||||||||||||||    ||||||| || ||  | ||||  ||||| ||||| | ||||||||| |||||||||||| || ||||||    
T  26677113 atatattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttataca-tttttc 26677211  T
Q  111 ttaatagttgtgaaatgaac-aaaaagctcatttataattggacggagggagta 163  Q
    ||||||  |||||||| ||| ||||| |||||||||  | ||||||| ||||||    
T  26677212 ttaatatgtgtgaaataaacgaaaaaactcatttattttgggacggaaggagta 26677265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 39171571 - 39171700
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagta-agaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactt 98  Q
    |||| ||||||||||||||| |||||||||||||||| |||| | ||||||||| ||  | ||||||  ||| |||||||||||||||| || |||| ||    
T  39171571 actcacaattcaatatattccactttgcatttatgat-agtagataatgcatcaatacttaacaaaagtacttaaaaccatttttctctctccttcattt 39171669  T
Q  99 attcactttttcttaatagttgtgaaatgaaca 131  Q
    ||  |  |||| ||||||| |||||||||||||    
T  39171670 at--atatttttttaataggtgtgaaatgaaca 39171700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 886522 - 886478
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||| |||||||||||||||||||||||||||  |||||||||    
T  886522 caattcgatatattctactttgcatttatgataaagaagaatgca 886478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37459378 - 37459430
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatca 53  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||| |||||    
T  37459378 actcccaatttaatatattcaactttgcatttatgataaagaagaatacatca 37459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39998191 - 39998239
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgc 49  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||    
T  39998191 actctcaattcaatatattctactttacatttatgataaagaagaatgc 39998239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 15131862 - 15131764
Alignment:
Q  170 ttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtcggacaccgcgacacg 268  Q
    |||||||||| | ||||||| |||  ||||||||| || ||||| | |||| || ||||| || ||||  ||  |||||||||||||||||||||||||    
T  15131862 ttatataggtgtcggacaccggtcgtaggagtgtcgaagtaaagaaaaaaaacaattattcaggacaccggttcgacacgtgtcggacaccgcgacacg 15131764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25174664 - 25174626
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  25174664 actctcaattcaatatattctactttgcatttataataa 25174626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38201470 - 38201432
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  38201470 actcccaattcaatatactctaatttgcatttatgataa 38201432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5962552 - 5962519
Alignment:
Q  1 actcccaattcaatatattctactttgcatttat 34  Q
    |||||||||||||||||||| |||||||||||||    
T  5962552 actcccaattcaatatattccactttgcatttat 5962519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 8566126 - 8566065
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatga 128  Q
    ||||||||  ||||||||||  |||||||||||| ||| |||||||||||  ||||||||||    
T  8566126 cactcaaacacatttttctccctctttcacttatacacgttttcttaataagtgtgaaatga 8566065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 14954003 - 14953974
Alignment:
Q  10 tcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||||||||||||||    
T  14954003 tcaatatattctactttgcatttatgataa 14953974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28802795 - 28802832
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28802795 actctcaattcaatatattccactttgcatttatgata 28802832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 32241499 - 32241379
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||| ||||||| |||||||||||||||||   |||||||||||| ||  | |||| |||||| |||| ||||||| ||| || |||| |||| ||    
T  32241499 ccaattcattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttataca 32241400  T
Q  104 ctttttcttaatagttgtgaaa 125  Q
     ||| ||||||||  |||||||    
T  32241399 -tttgtcttaatatgtgtgaaa 32241379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44615444 - 44615411
Alignment:
Q  1 actcccaattcaatatattctactttgcatttat 34  Q
    |||| |||||||||||||||||||||||||||||    
T  44615444 actctcaattcaatatattctactttgcatttat 44615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 3384567 - 3384599
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  3384567 caattcaatatattcaactttgcatttatgata 3384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 27875219 - 27875183
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||| |||| |||||||||||||||||||    
T  27875219 tcccaattcaatgtattatactttgcatttatgataa 27875183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 32776011 - 32776175
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  | |||||  ||||||||||||||||||||| || ||||||||    
T  32776011 actcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcactta 32776110  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | |||||||||||||||  |||||||||| ||||| ||||||||||||| | |||||||||||||    
T  32776111 tacactttttcttaatatgtgtgaaatgagcaaaaggctcatttataatggaacggagggagtat 32776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37264341 - 37264502
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||  ||||||   |||||||||||||||||||||  ||||||||||    
T  37264341 actcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctct--ctttcactta 37264438  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |  ||||||||||||||  |||||||||| ||||| ||||| ||| ||| ||||||||||||||    
T  37264439 tatactttttcttaatatgtgtgaaatgagcaaaaggctcacttaaaatgggacggagggagta 37264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 29997106 - 29996942
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttatt 101  Q
    |||||| |||||||||| |||||||||||||||||||  ||||||||| || ||| | ||||  ||| |||||||||||||||| | ||||||||||||     
T  29997106 tcccaactcaatatattatactttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttctttctctttcacttata 29997007  T
Q  102 cactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    |||||||||||||||  ||||||||||   ||| ||||| ||| ||| ||||||||| |||||||    
T  29997006 cactttttcttaataagtgtgaaatgagtcaaaggctcagttaaaataggacggaggaagtataa 29996942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 32346552 - 32346708
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    |||| |||||||| |||||||||||||||||||| |  |||||| |  ||||||||||  |||||||||| || | ||||| ||||||||||||| ||||    
T  32346552 aatttaatatattttactttgcatttatgataaggagaaatgcaccgataaatgacaagtcactcaaaactatctctctctgtctttcacttatttactt 32346651  T
Q  107 tttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    ||||||||||  ||||||||||||||||  |||| |||||| |||| ||||||||||||    
T  32346652 tttcttaatatgtgtgaaatgaacaaaatactcaattataa-tgga-ggagggagtata 32346708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 161
Target Start/End: Complemental strand, 33774117 - 33773962
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    ||||||| ||||||| ||||||||| |||||||    ||||| ||||| ||  | |||| ||||||||||| |||||||||| |||||||||||| ||||    
T  33774117 caattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaagacactcaaaactatttttctctctctttcacttatacact 33774018  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggag 161  Q
    |||||||||||  |||||||||||  ||||| ||| ||| ||| ||||||||||||    
T  33774017 ttttcttaatatatgtgaaatgaattaaaagttcagttaaaatgggacggagggag 33773962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34064243 - 34064382
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||| || ||  | |||| ||||||||||| |||||||||| | ||||| ||||    
T  34064243 actctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctctatttcatttat 34064342  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctca 140  Q
     |||||||| ||||||  ||||||| ||| |||| |||||    
T  34064343 acacttttttttaatatgtgtgaaaagaaaaaaaggctca 34064382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 6697130 - 6697243
Alignment:
Q  22 actttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgt 121  Q
    ||||||||||||||||||  || |||||| || || | ||||||||||| ||||  ||||||||||||||||||||||| || ||||||||||||  |||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaacacttaaaattatttttctctttctttcacttatacattttttcttaataagtgt 6697229  T
Q  122 gaaatgaacaaaaa 135  Q
    ||||||||||||||    
T  6697230 gaaatgaacaaaaa 6697243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32972097 - 32971969
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||| ||  ||||||||| || ||  ||| ||   ||||||||||||||||||||| |||||||||||    
T  32972097 actcacaattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcactta 32971998  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || ||||||||||||  ||||||||||    
T  32971997 tacattttttcttaataagtgtgaaatga 32971969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14648998 - 14648831
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacac---tcaaaaccatttttctctttctttcact 97  Q
    |||| |||||||||||||||||| |||||||||||||||  |  |||||| || ||| |||||| ||||   | |||| |||||||||||||||||||||    
T  14648998 actctcaattcaatatattctaccttgcatttatgataatgagaaatgcaccaataattgacaagacactaattaaaatcatttttctctttctttcact 14648899  T
Q  98 tattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    ||| || ||||||   |||  || ||||||| ||||||||||| |||||||  |||| ||||||||||    
T  14648898 tatacattttttcaatatatgtgcgaaatgagcaaaaagctcacttataatgagacgaagggagtata 14648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 3667956 - 3667832
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||||||||||||||||| ||||||||||||| || ||||||  | ||  ||| || ||||||||||  |||||||||||| ||||||||||    
T  3667956 actctcaattcaatatattctactttacatttatgataagaaataatgcactaatacttgataagacactcaaaattatttttctctttttttcacttat 3667857  T
Q  101 tcactttttcttaatagttgtgaaa 125  Q
     |||| ||||||||||  |||||||    
T  3667856 acactatttcttaatatgtgtgaaa 3667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2849283 - 2849409
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| |||| |||||| |||||||||| ||||||| |||    
T  2849283 actctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcattta 2849382  T
Q  100 ttcactttttcttaatagttgtgaaatg 127  Q
    | || ||||||||||||  |||||||||    
T  2849383 taca-tttttcttaatatgtgtgaaatg 2849409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 8149999 - 8150134
Alignment:
Q  13 atatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttctt 112  Q
    |||||||||||||||  ||||||||||   | ||||||  | ||  |||||||||||| |||||||||||||||| |||||||||||| || ||||||||    
T  8149999 atatattctactttgattttatgataatggaaaatgcacaaatatttgacaaaacacttaaaaccatttttctctctctttcacttatacattttttctt 8150098  T
Q  113 aatagttgtgaaatgaacaaaaagctcatttataat 148  Q
    ||||  ||||||||||||| ||   |||||||||||    
T  8150099 aatatgtgtgaaatgaacacaagattcatttataat 8150134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28333199 - 28333298
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||  | ||||  |||||||||| |||||||||| ||||||| ||||    
T  28333199 actcccaattcaatatattctactttacatttatgataagaaataatgcatcaatacttaacaagtcactcaaaactatttttctctctctttcatttat 28333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9658866 - 9659004
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||| ||||| |||| ||||||||| ||||||| |||||  | |||||| || ||  | |||| |||||||||||||||||||||| |||||| ||| |    
T  9658866 actcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctctctttcgcttgt 9658965  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctc 139  Q
     || ||||||||||||  ||||||||||| |||| ||||    
T  9658966 acattttttcttaatatgtgtgaaatgaataaaatgctc 9659004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 40023800 - 40023667
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    ||||||||||||| ||||||||||||||| |||| |  |||||   | ||  |||||| ||||||||||| |||||||||| | ||||| ||||  | ||    
T  40023800 aattcaatatattttactttgcatttatggtaaggagaaatgctctaatatttgacaagacactcaaaacaatttttctctctttttcaattatatattt 40023701  T
Q  107 tttcttaatagttgtgaaatgaacaaaaagctca 140  Q
    ||||||||||  |||||||| |||||||||||||    
T  40023700 tttcttaatacatgtgaaattaacaaaaagctca 40023667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 47238312 - 47238373
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatga 128  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  47238312 cactcaaaaccatttttctctctctttcacttatacactttttcttaataagtgtgaaatga 47238373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 10355809 - 10355701
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||||||||||||  |  |||||| || ||  ||| ||  |||||||||||||||||| ||| |||| ||||||| |||    
T  10355809 caattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttttttctctcttacacttatacac 10355710  T
Q  105 tttttctta 113  Q
    |||||||||    
T  10355709 tttttctta 10355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45218237 - 45218129
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||| |||  |||||||||| |||||||||| ||||||  |||    
T  45218237 actcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttccttta 45218138  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  45218137 tacactttt 45218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37496476 - 37496359
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaacca--tttttctctttctttcactt 98  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||||||  | ||  | |||| | ||||||||| |  | | ||||| ||||||||||    
T  37496476 actctcaattcaatatattctactttacatttatgataagaaagaatgcacaaatacttaacaagatactcaaaactatctctctctctctctttcactt 37496377  T
Q  99 attcactttttcttaata 116  Q
    || |||||||||||||||    
T  37496376 atacactttttcttaata 37496359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 9602889 - 9603018
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||| ||||||||||||||||||||||  |||||||||||| ||  | ||||   || ||||| | |||||| ||| |||| ||||||    
T  9602889 actctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccactta 9602988  T
Q  100 ttcactttttcttaatagttgtgaaatgaa 129  Q
    | |||||||| ||||||  |||||||||||    
T  9602989 tgcacttttttttaataagtgtgaaatgaa 9603018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 9830460 - 9830589
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||| ||||||||||||||||||||||  |||||||||||| ||  | ||||   || ||||| | |||||| ||| |||| ||||||    
T  9830460 actctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccactta 9830559  T
Q  100 ttcactttttcttaatagttgtgaaatgaa 129  Q
    | |||||||| ||||||  |||||||||||    
T  9830560 tgcacttttttttaataagtgtgaaatgaa 9830589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 23111159 - 23111052
Alignment:
Q  10 tcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcactttt 108  Q
    ||||||||||||||||| ||||||||||||  ||||||||| || ||  ||| ||| ||| |||||| ||||||||||| | ||||| |||| || ||||    
T  23111159 tcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctctatttcatttatacattttt 23111060  T
Q  109 tcttaata 116  Q
    ||||||||    
T  23111059 tcttaata 23111052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36070133 - 36070247
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||| ||||||||||||| | ||||||||||  || |||||| || ||  ||||||| ||||||||||||||||| |||| ||||||| |||    
T  36070133 actctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcattta 36070232  T
Q  100 ttcactttttcttaat 115  Q
    | || |||||||||||    
T  36070233 taca-tttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38589762 - 38589857
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttca 95  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||| ||   || |||||||||||||||||| |||||||    
T  38589762 actcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataagggcattcaaaaccatttttctctctctttca 38589857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 18731471 - 18731550
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccattttt 83  Q
    |||||||||||||||||||||| ||||||||||||  |||||| ||||| ||  ||| ||| ||||||||||| ||||||    
T  18731471 ccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttgataaagacactcaaaacgattttt 18731550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 11816812 - 11816755
Alignment:
Q  196 aggagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtc 253  Q
    ||||||||| |||||||| ||||||| | |||||||| ||||| ||||||||||||||    
T  11816812 aggagtgtcgaaataaagaagaaaataacttatttaggacactcgtctgacacgtgtc 11816755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27337952 - 27337871
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccattt 81  Q
    ||||||||||||||||||| |||||| ||||||||||||  || |||||| || ||  ||||||| ||||||||||| ||||    
T  27337952 actcccaattcaatatattatactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaactattt 27337871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29257575 - 29257612
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29257575 actcccaattcaatatattccactttgcatttatgata 29257612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 2842125 - 2842018
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||  |||||||||||||||||    ||||||||||| ||  |||||| |||||| || ||||||||||||| || |||| |||| || |    
T  2842125 aattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacacttaacaccatttttctctctccttcatttataca-t 2842027  T
Q  106 ttttcttaa 114  Q
    |||||||||    
T  2842026 ttttcttaa 2842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 5068371 - 5068272
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatga-caaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||||||||| |||||||||||   ||||||||| || ||  | |  ||||||||||| || |||||| ||||||||||| |||| ||||    
T  5068371 aattcaatatattctactttacatttatgata---aagaatgcaccaatacttaataaaaacactcaatactatttttttctttctttcatttatacact 5068275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 6591614 - 6591582
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||    
T  6591614 aattcaatatattctactttgcatttatgataa 6591582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 11820405 - 11820349
Alignment:
Q  198 gagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtcg 254  Q
    ||||| |||| ||||| ||||||| | |||||||| |||||||||||||||||||||    
T  11820405 gagtgacaaagtaaagaagaaaataacttatttagaacacttgtctgacacgtgtcg 11820349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 24288456 - 24288500
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgca 24288500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43007922 - 43008022
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||| |||  |||||||||||  || ||||||  | ||  ||||||| ||||||||||| ||||||| || |||||||||||    
T  43007922 actctcaattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcactta 43008021  T
Q  100 t 100  Q
    |    
T  43008022 t 43008022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 25778776 - 25778811
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataag 40  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25778776 ccaattcaatatattttactttgcatttatgataag 25778811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 39143680 - 39143597
Alignment:
Q  73 aaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacgga 156  Q
    |||||||| |||||| | |||||| ||| ||||||||||| |||  |||||||||| |||||  |||| ||||||| |||||||    
T  39143680 aaaccattattctctctatttcacatatacactttttctttatacgtgtgaaatgagcaaaagactcacttataatgggacgga 39143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 7425953 - 7425828
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaat-gacaa-aacactcaaaaccatttttctctttctttcacttattc 102  Q
    |||||||||||||||| |||||||||||||||||    |||||||| || ||  |  |||| |||||| |||||||||||||||| || |||| |||| |    
T  7425953 ccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcatttatac 7425854  T
Q  103 actttttcttaatagttgtgaaatgaa 129  Q
    | ||| ||||||||  |||||||||||    
T  7425853 a-tttgtcttaatacgtgtgaaatgaa 7425828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 21446530 - 21446580
Alignment:
Q  66 acactcaaaaccatttttctctttctttcacttattcactttttcttaata 116  Q
    ||||||||||  |||||||||| |||||||||||| || ||||||||||||    
T  21446530 acactcaaaattatttttctctctctttcacttatacaatttttcttaata 21446580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39343750 - 39343712
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  39343750 actccaaattcaatatattctactttacatttatgataa 39343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 19687992 - 19688025
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||| |||||||||||||||||||    
T  19687992 caattcaatatattatactttgcatttatgataa 19688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23186222 - 23186185
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  23186222 actccaaattcaatatattctactttgtatttatgata 23186185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33584591 - 33584628
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| | |||||||||||||||    
T  33584591 actcccaattcaatatattccattttgcatttatgata 33584628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 34001933 - 34001900
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||| ||||||||||||||||||    
T  34001933 caattcaatatattccactttgcatttatgataa 34001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 38181949 - 38181916
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||| |||||||||||||||    
T  38181949 ccaattcaatatattctattttgcatttatgata 38181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 11730827 - 11730855
Alignment:
Q  12 aatatattctactttgcatttatgataag 40  Q
    |||||||||||||||||||||||||||||    
T  11730827 aatatattctactttgcatttatgataag 11730855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 35641817 - 35641885
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaa 135  Q
    |||||||||| ||||||| |  ||||||||| || ||| ||||||||||   |||||||||||||||||    
T  35641817 cactcaaaactatttttcccactctttcactcatacacattttcttaattcatgtgaaatgaacaaaaa 35641885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 37490692 - 37490660
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  37490692 caattcaatatattccactttgcatttatgata 37490660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15371942 - 15371780
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||  | ||  ||| || ||||||||||||||||||||||  |||||||||||    
T  15371942 actcccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataagacactcaaaaccatttttctctcgctttcacttat 15371843  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||||||||||||| ||||||||||||| ||  ||||| ||| ||| ||||| ||||||||    
T  15371842 acactttttcttaataattgtgaaatgaaccaagggctcagttaaaatgggacgaagggagta 15371780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 15355603 - 15355759
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||| |||||||||||||| |||||||||||  ||||||||| || ||  ||| || ||||||||||||| |||||||| | ||||||||||    
T  15355603 actctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataagacactcaaaaccaattttctctctttttcacttat 15355702  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggag 157  Q
     ||||||||||||||| |||| |||||||| || |||||| ||| ||| | ||||||    
T  15355703 acactttttcttaataattgtaaaatgaaccaagagctcagttaaaatggaacggag 15355759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15325175 - 15325337
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| |||| ||||||||||||||||||||||| |||||  |||||  || || ||  ||| ||  || ||||||||| |||||||| ||||||||||||    
T  15325175 actctcaatccaatatattctactttgcatttacgataaagaagaacacaccaatagttgataaggcattcaaaaccaattttctctctctttcacttat 15325274  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||||||||||||| |||||||||||   || |||||| ||| ||| ||||||||||||||    
T  15325275 acactttttcttaataattgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 15325337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 15321299 - 15321179
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||| || ||  | | || ||||| ||||||| |||||||| ||||||| |||| ||||    
T  15321299 caattcaatatattctactttgcatttatgataaagaagaacgcaccaatagtttataagacactgaaaaccaattttctctctctttcagttatacact 15321200  T
Q  106 ttttcttaatagttgtgaaat 126  Q
    ||||||||||| |||||||||    
T  15321199 ttttcttaataattgtgaaat 15321179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33921548 - 33921386
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||| | || ||  | ||||| |||||||||||||||||||||| || |||||| |    
T  33921548 actcccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctctccttcactaa 33921449  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |  | ||||||||||||  || ||||||| ||||  ||||| ||| ||| ||||||||||||||    
T  33921448 tata-tttttcttaataagtgcgaaatgagcaaatggctcagttaaaatgggacggagggagta 33921386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31076003 - 31075841
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||||||||||||||||| || |||| |||||||||||| | ||||||| || ||  ||| || |||||||| ||||||||||||| |||||||||| |    
T  31076003 actcccaattcaatatattatattttgtatttatgataagaaggaatgcaccaatagttgaaaagacactcaataccatttttctctctctttcacttgt 31075904  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     || |||||||||||    ||||||||||||||| | ||| ||| ||| | ||||| ||||||    
T  31075903 acattttttcttaatgtgggtgaaatgaacaaaatgatcacttaaaatggcacggaaggagta 31075841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15351457 - 15351335
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||||||| |||||||||||||||  ||||| |||||| ||  ||| ||  |||| |||| || |||||||| || ||||||||| || |    
T  15351457 caattcaatatattctaccttgcatttatgataaagaagaacgcatcaatagttgataaggcactaaaaatcaattttctctctcattcacttatacatt 15351358  T
Q  106 ttttcttaatagttgtgaaatga 128  Q
    ||||||||||| |||||||||||    
T  15351357 ttttcttaataattgtgaaatga 15351335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 16126243 - 16126405
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaac-catttttctctttctttcacttattca 103  Q
    ||||||||||||||| |||||||||||||||||||| |  |||||| || ||  | |||| |||||||||||   ||||| ||| |||||| ||| | ||    
T  16126243 ccaattcaatatattatactttgcatttatgataagaataaatgcaccaatactttacaagacactcaaaactgttttttttctctctttcgcttttaca 16126342  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    |||||||||||||  ||||||||||||||||   ||| ||| |||  ||||||||||||||||    
T  16126343 ctttttcttaatacgtgtgaaatgaacaaaatagtcagttaaaatgagacggagggagtataa 16126405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34803786 - 34803621
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata--agtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcact 97  Q
    |||| |||||||||||||| || |||||||||||||||  |  | |||||||||| ||  ||| ||| ||||||||||||||||| |||| ||||||  |    
T  34803786 actctcaattcaatatattttattttgcatttatgatataaagaggaatgcatcaatagttgataaagacactcaaaaccattttcctctctctttcctt 34803687  T
Q  98 tattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||| |||||||||||||||  |||||||||| | ||  ||||| ||| ||| ||||||||||||||    
T  34803686 tatacactttttcttaataagtgtgaaatgagctaagggctcaattaaaatgggacggagggagta 34803621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 20383885 - 20384032
Alignment:
Q  13 atatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttctt 112  Q
    |||||||||| ||| |||||| |||||  | ||||||| || ||  |||||| |||||||||||||||||| ||| |||||||||||   || |||||||    
T  20383885 atatattctatttttcatttaagataatgaggaatgcaccaatacttgacaagacactcaaaaccatttttttctctctttcacttacataccttttctt 20383984  T
Q  113 aatagttgtgaaatgaacaaaaagctcatttataattggacggaggga 160  Q
    ||||  ||| ||| |||||||||| ||| | ||||| ||| |||||||    
T  20383985 aatatgtgttaaaggaacaaaaagttcactaataatgggatggaggga 20384032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3874129 - 3874020
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||||||||||||| ||||| ||||||||||||  || |||||| || ||  ||||||| |||||||||| ||||||| ||| ||||||| |||    
T  3874129 actcctaattcaatatattcaactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcattta 3874030  T
Q  100 ttcacttttt 109  Q
    | ||||||||    
T  3874029 tacacttttt 3874020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33018023 - 33017947
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaac 76  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| |||||||||||    
T  33018023 actcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaac 33017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 20027638 - 20027724
Alignment:
Q  29 atttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcactttttcttaa 114  Q
    |||||||||||  ||||||||| || ||  | ||||| |||||||||| |||||| || |||||||||||||| |||||||||||||    
T  20027638 atttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcattttgctatttctttcacttatacactttttcttaa 20027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2310367 - 2310318
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    ||||||||||||||||||| ||| |||||||||||||||  |||||||||    
T  2310367 actcccaattcaatatattataccttgcatttatgataaagaagaatgca 2310318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4552937 - 4552986
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||| ||||||||||| ||||||||||||||||  |||||||||    
T  4552937 actcccaatttaatatattctaatttgcatttatgataaagaagaatgca 4552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 34703735 - 34703794
Alignment:
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    |||||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||||||||    
T  34703735 tttttcttaatagt-gtgaaatgaacaaaatgctcacttaaattgggacggagggagtata 34703794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30064028 - 30063995
Alignment:
Q  1 actcccaattcaatatattctactttgcatttat 34  Q
    |||||||||||||||||||| |||||||||||||    
T  30064028 actcccaattcaatatattccactttgcatttat 30063995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9354506 - 9354422
Alignment:
Q  14 tatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcact 97  Q
    ||||||||||| | ||||||||||||  ||||||| | || ||  | ||||| |||||||||||||||||||||| || ||||||    
T  9354506 tatattctactctacatttatgataaagaagaatggaccaatatttaacaaagacactcaaaaccatttttctctctcattcact 9354422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 34915886 - 34915854
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||| ||||||||||||||||||    
T  34915886 aattcaatatattccactttgcatttatgataa 34915854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5499508 - 5499349
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||| |||||||||||||||| ||||||| ||||||||| | |||||||||| ||  |||||   |||||||||| |||||||| | ||||||||||||    
T  5499508 actcctaattcaatatattctattttgcatctatgataagaaggaatgcatcaatatttgaca---cactcaaaactatttttctttctctttcacttat 5499412  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     |||||||||||||||  ||| |||||||||||| ||||  ||| ||| ||||||||||||||    
T  5499411 acactttttcttaatatgtgtcaaatgaacaaaaggctcggttaaaatgggacggagggagta 5499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 28330822 - 28330987
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    ||||||||||||||||| ||| |||||||||||||||||  ||||||||| || ||  ||| ||   |||||||| |||||||||||| |||||||||||    
T  28330822 actcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactta 28330921  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    | |||||||||||||||  ||||||||||   ||  ||||| ||| ||| ||||||||||||||||    
T  28330922 tacactttttcttaataagtgtgaaatgagtcaatggctcagttaaaatgggacggagggagtata 28330987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 41594860 - 41594760
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    ||||||||||||||||||||| |||||||||||  |||||||||| ||||  |||||||||||||||| ||||  ||||||| |||||||||||||||||    
T  41594860 cactcaaaaccatttttctctctctttcacttaaacactttttctcaatatatgtgaaatgaacaaaaggctcgcttataatgggacggagggagtataa 41594761  T
Q  167 g 167  Q
    |    
T  41594760 g 41594760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 46958750 - 46958911
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||||||||||||||||||| ||||||||||| | ||||||| |  ||  | |||| ||||||||||| ||||  |||| ||||||||||||    
T  46958750 actctcaattcaatatattctactttgcgtttatgataagaaggaatgcaccgatacttaacaagacactcaaaactattt--ctctatctttcacttat 46958847  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
     |||||||||||||||  ||||||||||||||||  |||| ||| ||  |||||||| ||||||    
T  46958848 acactttttcttaatatgtgtgaaatgaacaaaatactcagttaaaaggggacggagagagtat 46958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 20964363 - 20964204
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||| ||||||||||||||||||||| |||||  ||||||||| || ||  ||| ||| |||| ||||  ||||||||||| |||||||||||| ||    
T  20964363 ccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttgataaagacacgcaaactcatttttctctctctttcacttataca 20964264  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||||||||||||  ||||||||||   || |||||| ||| ||| ||||||||||||||    
T  20964263 ctttttcttaataagtgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 20964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 38319939 - 38320065
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||| || ||  ||| ||   |||||||| |||||||||||| |||||||||||    
T  38319939 actctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactta 38320038  T
Q  100 ttcactttttcttaatagttgtgaaat 126  Q
    | |||||||||||||||  ||||||||    
T  38320039 tacactttttcttaataaatgtgaaat 38320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 42132845 - 42132971
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa---cactcaaaaccatttttctctttctttcacttatt 101  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||  | | ||     |||||||| |||||||||||| ||||||||||||     
T  42132845 ccaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagtttataagggcgcactcaaacccatttttctctctctttcacttata 42132944  T
Q  102 cactttttcttaatagttgtgaaatga 128  Q
    |||||||||||||||  ||||||||||    
T  42132945 cactttttcttaataagtgtgaaatga 42132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 53848674 - 53848814
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||| || ||  ||| ||   ||||||||| ||||||| ||| |||| ||||||    
T  53848674 actctcaattcaatatattctactttgcatttatgataaataataatgcaccaatagttgataagggcactcaaaatcatttttttctctcttacactta 53848773  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctca 140  Q
    | |||||||||||||||   ||||||||||| |||||||||    
T  53848774 tacactttttcttaataaacgtgaaatgaaccaaaagctca 53848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 29990546 - 29990416
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    ||||||||||||||| |||||  |||||||||| | |||||||||||| ||  |||||| ||||||||| | |||||| ||| |||||||||||| || |    
T  29990546 caattcaatatattcaactttatatttatgatatgaaagaatgcatcaatacttgacaagacactcaaatctatttttttctctctttcacttatacatt 29990447  T
Q  106 ttt--tcttaatagttgtgaaatgaacaaaa 134  Q
    |||  ||||||||  ||||||||||||||||    
T  29990446 ttttatcttaatatatgtgaaatgaacaaaa 29990416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 18872718 - 18872571
Alignment:
Q  14 tatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttctta 113  Q
    ||||||||| ||||||||||||||||| |  ||||||||| ||  ||| || ||||||||  | ||||||| || |||||||||||| ||||||||||||    
T  18872718 tatattctattttgcatttatgataaggagaaatgcatcaatacttgataagacactcaa--ctatttttcgctctctttcacttatacactttttctta 18872621  T
Q  114 atagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||  |||||||||||||||| | ||| ||| |||  |||||| ||||||    
T  18872620 atacgtgtgaaatgaacaaaatgttcacttaaaatgagacggatggagta 18872571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 3503128 - 3502992
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattca-ct 105  Q
    |||||||||||||||| ||||| ||||||||||   ||||| || ||     ||||||| ||||||||| |||||||||||||||||||||||| ||  |    
T  3503128 aattcaatatattctattttgcttttatgataatggagaatacaacacc---tgacaaagcactcaaaatcatttttctctttctttcacttatacattt 3503032  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttat 145  Q
    ||||||||||| |||||||||||| |||| ||||| ||||    
T  3503031 ttttcttaatatttgtgaaatgaataaaatgctcagttat 3502992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 4485952 - 4486019
Alignment:
Q  59 tgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaat 126  Q
    |||||||||||||||||| |||||||||||||||||||||||  | |||||||||||| |||||||||    
T  4485952 tgacaaaacactcaaaactatttttctctttctttcacttatatattttttcttaatatttgtgaaat 4486019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 8759807 - 8759973
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||  ||| ||    ||| ||| |||||||||||| ||||||| |||    
T  8759807 actcccaattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttgataagtgaactgaaacccatttttctctctctttcattta 8759906  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    | |||||||| ||||||  | ||||||||  |||| | ||  ||| ||| |||| ||||||||||||    
T  8759907 tacacttttttttaataagtttgaaatgagtaaaaggttcggttaaaatgggacagagggagtataa 8759973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13529890 - 13530028
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||| ||||| |||| ||||||||| ||||||| |||||  | |||||| || ||  | |||| |||||||||||||||||||||| |||||| ||| |    
T  13529890 actcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctctctttcgcttgt 13529989  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctc 139  Q
     || ||||||||||||  ||||||||||| |||| ||||    
T  13529990 acattttttcttaatatgtgtgaaatgaataaaatgctc 13530028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 49448874 - 49448999
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac 104  Q
    |||||||||||||| |||||||||||||||||||   ||||||||  | ||  |||||| | |||| |||||||||||||||| || ||||||||| ||     
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttataca- 49448972  T
Q  105 tttttcttaatagttgtgaaatgaacaaa 133  Q
    ||||||||||||  |||||||||||||||    
T  49448973 tttttcttaata--tgtgaaatgaacaaa 49448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 25902478 - 25902378
Alignment:
Q  63 aaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagt 162  Q
    |||||||||||||||||||| ||   |||||||||||| |||||||||||||||  ||||||||||  |||| ||||| |||| || ||||||||| |||    
T  25902478 aaaacactcaaaaccattttacttcctctttcacttatacactttttcttaatatgtgtgaaatgaggaaaatgctcagttattatgggacggaggaagt 25902379  T
Q  163 a 163  Q
    |    
T  25902378 a 25902378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32949928 - 32949764
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactc-aaaaccatttttctctttctttcactt 98  Q
    |||| ||||||||||||||||||||| ||||||||||||  || |||||| || ||  ||| ||| |||||| |||||||||||||| | | ||||| ||    
T  32949928 actctcaattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttgataaagacactcaaaaaccatttttctatctatttcattt 32949829  T
Q  99 attcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    || |||||||| ||||||  ||||||||||   ||| ||||| ||| ||| |||| |||||||||    
T  32949828 atacacttttttttaataagtgtgaaatgagtcaaaggctcagttaaaatgggacagagggagta 32949764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22872467 - 22872303
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa---aacactcaaaaccatttttctctttctttcact 97  Q
    |||| ||||||||||||||| ||||||||||||||||||   |||||||| || ||  ||||||   | |||| |||||||||||||||| |  ||||||    
T  22872467 actctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcact 22872368  T
Q  98 tattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||| || ||||||||||||  |||||||||| ||||  ||||| |||   | ||||||||||||||    
T  22872367 tataca-tttttcttaatatgtgtgaaatgagcaaatggctcacttaatttgggacggagggagta 22872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 3512012 - 3511927
Alignment:
Q  61 acaaaacactcaaaaccatttttctctttctttcacttat-tcactttttcttaatagttgtgaaatgaacaaaaagctcatttat 145  Q
    ||||||||||||||| |||||| |||||||||||||||||     |||||||||||| ||||||||||||||||| ||||| ||||    
T  3512012 acaaaacactcaaaatcattttcctctttctttcacttataattttttttcttaatatttgtgaaatgaacaaaatgctcagttat 3511927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 4360482 - 4360355
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||| |||||||||||||| ||    |||||||| || ||  | |||||| |||| ||||||||||||||||||| |||| |||| |      
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac-t 4360384  T
Q  105 tttttcttaatagttgtgaaatgaacaaa 133  Q
    ||||||||||||  |||||||||||||||    
T  4360383 tttttcttaatatgtgtgaaatgaacaaa 4360355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 41436514 - 41436633
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac 104  Q
    |||||||| ||||||||||||||||||||||||    |||||||| || || || |||||| |||| |||||||||||| ||| ||| |||||||| |||    
T  41436514 caattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacac 41436613  T
Q  105 tttttcttaatagttgtgaaa 125  Q
     |||||||||||  |||||||    
T  41436614 -ttttcttaatatgtgtgaaa 41436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48400710 - 48400583
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||| ||||| ||  ||| |||| || | |||| ||||||||||| ||||||| |||    
T  48400710 actctcaattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcattta 48400611  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || |||||||||||   ||||||||||    
T  48400610 taca-tttttcttaatctgtgtgaaatga 48400583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 49218861 - 49218734
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||||||||||| ||||||| |||||||||||  | ||||||| || ||  ||| ||   ||||| || |||||||||||| |||||||||||    
T  49218861 actctcaattcaatatattatactttgaatttatgataaaga-gaatgcaccaatagctgataagggcactctaacccatttttctctctctttcactta 49218763  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | |||||||||||||||  ||||||||||    
T  49218762 tacactttttcttaataagtgtgaaatga 49218734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38615042 - 38614960
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccattttt 83  Q
    ||||||||||||||||||| || ||||||||||||||||| || |||||| || ||  | |||| ||||||||||| ||||||    
T  38615042 actcccaattcaatatattttattttgcatttatgataagaaaaaatgcaccaatacttaacaagacactcaaaactattttt 38614960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 20294049 - 20294170
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    ||||||||||||| ||||||| || |||||| |  |  ||||||||| ||  ||| | ||||||| ||| ||||||||||| ||||| | ||| ||||||    
T  20294049 aattcaatatattatactttgtatgtatgatgaagagaaatgcatcaatacttgatataacactccaaatcatttttctctctcttttatttactcactt 20294148  T
Q  107 tttcttaatagttgtgaaatga 128  Q
    ||||||||||  ||||||||||    
T  20294149 tttcttaatacatgtgaaatga 20294170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36047179 - 36047130
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  36047179 actctcaattcaatatattctactttgcatttatgataaagaagaatgca 36047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 42051731 - 42051627
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||| || ||  ||  ||| ||||| |||||||||||||| | ||||||| |||| ||    
T  42051731 ccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaagacactaaaaaccatttttctatctctttcatttataca 42051632  T
Q  104 ctttt 108  Q
    |||||    
T  42051631 ctttt 42051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 44633190 - 44633277
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttcttt 93  Q
    ||||||||||| ||||||||| ||||||| ||||  ||||||||| || ||  ||||||| ||||||||||| ||||||||||||||||    
T  44633190 caattcaatat-ttctactttacatttatcataaagaagaatgcaccaatacttgacaaagacactcaaaactatttttctctttcttt 44633277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22020584 - 22020463
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||||||||||||| || |||| |  | ||  |||||||   ||||||||||| ||||||||  || ||| |||| |||    
T  22020584 caattcaatatattctactttgcatttatgataag-aaaaatgtacaaatagttgacaaaggaactcaaaacca-ttttctctcactctcatttatacac 22020487  T
Q  105 tttttcttaatagttgtgaaatga 128  Q
    ||||||||||||  ||||||||||    
T  22020486 tttttcttaataagtgtgaaatga 22020463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29550806 - 29550768
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  29550806 actcccaattcaatatattctactttacatttatgataa 29550768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37316001 - 37315963
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  37316001 actcccaattcaacatattctactttgcatttatgataa 37315963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 13719811 - 13719912
Alignment:
Q  9 ttcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcacttt 107  Q
    ||||||||||| |||||| ||||||||||||  || ||| ||||| ||  | ||||| ||||||||| |||||||||| | ||||||| |||| ||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataatacatcattacttaacaaagacactcaaacccatttttctttctctttcatttatacacttt 13719910  T
Q  108 tt 109  Q
    ||    
T  13719911 tt 13719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 32324354 - 32324451
Alignment:
Q  66 acactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||| |||||| |||||||||| | |||||||| |  | ||||||||||||  || ||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  32324354 acacccaaaacaatttttctctctatttcacttgtatattttttcttaatatgtgcgaaattaacaaaatgctcacttataataggacgaagggagta 32324451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39052980 - 39052931
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||||||    
T  39052980 actctcaattcaatatattctactttacatttatgataaagaagaatgca 39052931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41710223 - 41710186
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  41710223 actcccaattcaatatattccactttgcatttatgata 41710186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 53101911 - 53101870
Alignment:
Q  59 tgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  53101911 tgacaagacactcaaaatcatttttctctttctttcacttat 53101870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 1920823 - 1920890
Alignment:
Q  66 acactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||| |||| ||||||| |||||||||||||||| || ||||||||||||  ||||||||||| ||||    
T  1920823 acactaaaaatcattttt-tctttctttcacttatacattttttcttaatatgtgtgaaatgaataaaa 1920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 17237076 - 17237203
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||| |||||||||||||||||   |||||| ||  | ||  | |||||| |||| ||||| |||||||||| || |||| ||||  |     
T  17237076 caattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatata- 17237174  T
Q  105 tttttcttaatagttgtgaaatgaacaaa 133  Q
    ||||||||||||| |||||||||| ||||    
T  17237175 tttttcttaataggtgtgaaatgagcaaa 17237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38160231 - 38160116
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||  |||||| |||||||||||   ||||||||||| ||  ||||||| ||||| ||||| |||||||||| || || | |||    
T  38160231 actctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttattta 38160132  T
Q  100 ttcactttttcttaata 116  Q
    | || ||||||||||||    
T  38160131 taca-tttttcttaata 38160116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 47277683 - 47277596
Alignment:
Q  78 atttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctca--tttataattggacggagggagta 163  Q
    |||||| ||| ||||| |||||| || ||||||||||||  |||||||||| ||||| |||||  | |||||| ||||||||||||||    
T  47277683 atttttatctatcttttacttatacattttttcttaatatgtgtgaaatgagcaaaaggctcacttatataatgggacggagggagta 47277596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 37315930 - 37315836
Alignment:
Q  71 caaaaccatttttctctttctttcacttattcac-tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||  ||| |||||| | |||  |||| ||| ||  ||||||||||||||||    
T  37315930 caaaaccatttttctctctctttcactta-tcacttttttcttaataagtgttaaatgagccaaagtctcaattaaaacgggacggagggagtata 37315836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 3505755 - 3505832
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccattttt 83  Q
    ||||||||||||||||||||| ||||||||||||  || ||||||||| ||  | ||||| ||||||||| ||||||||    
T  3505755 caattcaatatattctactttacatttatgataa-aaaaaatgcatcaatagttaacaaagacactcaaagccattttt 3505832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10099804 - 10099766
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  10099804 actcccaattcaatatattctactttaaatttatgataa 10099766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34791031 - 34790902
Alignment:
Q  1 actcccaattcaatatattctactttg-catttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactt 98  Q
    |||| |||||||||||||||||||||  | ||||||||||  |||||||||  | ||  ||| |||| ||||||||| |||||||||||  |||||| ||    
T  34791031 actctcaattcaatatattctacttttacttttatgataaagaagaatgcacaaatacttgataaaagcactcaaaatcatttttctctcactttcattt 34790932  T
Q  99 attcactttttcttaatagttgtgaaatgaa 129  Q
    || ||| |||||||||||  |||| ||||||    
T  34790931 atacac-ttttcttaatatgtgtgcaatgaa 34790902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54217370 - 54217408
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  54217370 actcccaattcaatatattatactttgcagttatgataa 54217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 1796317 - 1796284
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||| |||||||||||||||||    
T  1796317 ccaattcaatatattccactttgcatttatgata 1796284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42544237 - 42544274
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  42544237 actcacaattcaatatattccactttgcatttatgata 42544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 47386287 - 47386218
Alignment:
Q  14 tatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccattttt 83  Q
    ||||||||||||||||||||||||||| | |||  || || ||| ||| || ||||||||||| ||||||    
T  47386287 tatattctactttgcatttatgataaggaggaacacaccaataagtgataagacactcaaaactattttt 47386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49306615 - 49306652
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  49306615 actcctaattcaatatattccactttgcatttatgata 49306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 54217478 - 54217515
Alignment:
Q  79 tttttctctttctttcacttattcactttttcttaata 116  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  54217478 tttttctctctctttcacttatacactttttcttaata 54217515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 8295058 - 8295094
Alignment:
Q  2 ctcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  8295058 ctcccaattcaatatattatacattgcatttatgata 8295094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 26799290 - 26799258
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||||| |||||||||||||||    
T  26799290 caattcaatatattctattttgcatttatgata 26799258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 29644388 - 29644420
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||||||||| |||||||||||    
T  29644388 caattcaatatattctactttacatttatgata 29644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35029063 - 35029171
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||| ||| ||||||||||| ||||||||||||  ||||||| |  | ||  ||||||| |||||| |||| |||||||||| | ||||| |||    
T  35029063 actcctaatttaatttattctactttacatttatgataaagaagaatgtactaatacttgacaaagacactcgaaactatttttctctctttttcattta 35029162  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  35029163 tacactttt 35029171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 37786994 - 37787087
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttat 100  Q
    ||||| ||||||||||| ||| |||||||| |||  |||||||||||| ||  ||||||| |||||||||  ||  ||||||||||||| ||||||    
T  37786994 caatttaatatattctattttacatttatggtaaagaagaatgcatcactacttgacaaacacactcaaactca--tttctctttcttttacttat 37787087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 38838707 - 38838766
Alignment:
Q  59 tgacaaaacactcaaaaccatttttctcttt--ctttcacttattcactttttcttaata 116  Q
    |||||| ||||| ||||| ||||||||||||  ||||||||||  |||||||||||||||    
T  38838707 tgacaacacacttaaaacaatttttctctttatctttcacttagacactttttcttaata 38838766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 41203770 - 41203889
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||| |||||| ||||||| ||   |||||||||||| ||  | |||| | |||| |||||||||||||| | || |||| |||| ||     
T  41203770 caattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatttataca- 41203868  T
Q  105 tttttcttaatagttgtgaaa 125  Q
    ||||||||||||  |||||||    
T  41203869 tttttcttaatacgtgtgaaa 41203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 54729558 - 54729526
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  54729558 caattcaatatattccactttgcatttatgata 54729526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 55360427 - 55360379
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgc 49  Q
    |||| |||||||||||||| |||||| ||||||||||||  ||||||||    
T  55360427 actctcaattcaatatattgtactttacatttatgataaagaagaatgc 55360379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29756222 - 29756059
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| || ||  ||| ||   |||||||| |||||||||||| |||||||||||    
T  29756222 actcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactta 29756123  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||||||  |||||||||| | ||  ||||  ||| ||| ||||||||||||||    
T  29756122 tacactttttcttaataagtgtgaaatgagccaagggctccgttaaaatgggacggagggagta 29756059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29225781 - 29225943
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttt-tctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| || ||  |||||| ||||||||| | ||||| ||||| ||||||||||     
T  29225781 actcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaagacactcaaacctattttctctctctctttcacttg 29225880  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | ||||||||||||||   ||| |||| ||||||| ||||| |||  || |||||||||||||||    
T  29225881 tacactttttcttaat--gtgtaaaattaacaaaatgctcagttaacatgggacggagggagtat 29225943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 37541189 - 37541064
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||| || ||  ||| ||| ||| |||||||||||||||||| |||||||||||| ||    
T  37541189 ccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctctctttcacttataca 37541090  T
Q  104 ctttttcttaatagttgtgaaatgaa 129  Q
    |||||||||||||  |||||||||||    
T  37541089 ctttttcttaataagtgtgaaatgaa 37541064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 10587661 - 10587498
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| ||| ||  ||||| ||||  ||||||||||||||||||||||    
T  10587661 actctcaattcaatatattctattttgcatttatgataatgaagaatgtatca-taattgataatgacacttaaaattatttttctctttctttcactta 10587563  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | |||||||||||||||  ||||||||||   || | |||| ||| ||| |||||||||||||||    
T  10587562 tgcactttttcttaataagtgtgaaatgagtcaataactcacttaaaatgggacggagggagtat 10587498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 26583756 - 26583884
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||| || ||  ||| |||  ||||||||  ||||||||||| |||||||||||    
T  26583756 actcccaattcaatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctctctttcactta 26583855  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | |||||||||||||||  ||||||||||    
T  26583856 tacactttttcttaataagtgtgaaatga 26583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 29225484 - 29225322
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattc- 102  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| || ||  | |||||  ||||||||| ||||||||||  |||||||||||| |     
T  29225484 ccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctttcacttatact 29225385  T
Q  103 --actttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
      ||||||||||||||  |||||||||| |||||  |||| ||||||| ||||||||||||||    
T  29225384 acactttttcttaatatgtgtgaaatgagcaaaagactcaattataatgggacggagggagta 29225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 50926788 - 50926949
Alignment:
Q  14 tatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcactttttctt 112  Q
    ||||||||||||| ||||||||||||  ||||||||| || ||  |||||||  || |||||||||||||||||| |||||  ||||| || ||||||||    
T  50926788 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctctctttttcttatacaatttttctt 50926887  T
Q  113 aatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataagttttata 174  Q
    ||||  ||||||||||  |||||||||| ||| |||  ||||||||||||| || |||||||    
T  50926888 aatatatgtgaaatgagaaaaaagctcagttaaaatgagacggagggagtacaatttttata 50926949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26924200 - 26924037
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||||||||||| |||||||||||||||||||  ||||||||| || ||  ||| ||   ||||||||  ||||||||||| ||||||||||     
T  26924200 actctcaattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctctctctttcacttt 26924101  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||||||  |||||||||| | || |||||| ||| ||  ||||||||||||||    
T  26924100 tacactttttcttaataagtgtgaaatgagccaagagctcagttaaaacgggacggagggagta 26924037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 40988448 - 40988542
Alignment:
Q  70 tcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    |||||||||||| ||||| |||||||||||| |  ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40988448 tcaaaaccatttgtctctctctttcacttatactatttttcttaatatgtgtgaaatgaa-aaaaagctcaattataattggacggagggagtata 40988542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46363491 - 46363329
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa--cactcaaaaccatttttctctttctttcactt 98  Q
    |||| |||||||||||||| |||||||||||||||||||  ||||||||| || ||  ||| |||   ||||||||  ||||| ||||| ||| ||||||    
T  46363491 actctcaattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaagtgcactcaaacacatttctctctctctctcactt 46363392  T
Q  99 attcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggag 161  Q
    || |||||||||||||||  ||||||||||   ||| ||||| ||| ||||||||||||||||    
T  46363391 atacactttttcttaataagtgtgaaatgagtgaaaggctcaattaaaattggacggagggag 46363329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27932913 - 27932797
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||| || ||  ||||||  |||||||||  ||||||||||| |||||||||||    
T  27932913 actctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcactta 27932814  T
Q  100 ttcactttttcttaata 116  Q
    |  |||||| |||||||    
T  27932813 tatacttttacttaata 27932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 7224457 - 7224576
Alignment:
Q  29 atttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatga 128  Q
    |||||||||||| | |||||||||| ||  || ||| | ||||||||||||||||| ||||||||||||||| || ||||| ||||||  ||||||||||    
T  7224457 atttatgataaggaggaatgcatcaatacttgtcaagaaactcaaaaccatttttcgctttctttcacttatacatttttttttaatatgtgtgaaatga 7224556  T
Q  129 acaaaaagctcatttataat 148  Q
    ||||||  |||| |||||||    
T  7224557 acaaaagactcacttataat 7224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 25819421 - 25819340
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctct 87  Q
    ||||| ||||| ||||||||||||||||||||||| | ||||||| || |||||||||||||||||||||  ||||||||||    
T  25819421 caatttaatattttctactttgcatttatgataaggaggaatgcaccaataaatgacaaaacactcaaaattatttttctct 25819340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2571391 - 2571514
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| |||||||||||||||||||||||||||| |||||| || |||||| || ||  | |||| ||||||||||| | |||||||| ||||||| ||||    
T  2571391 actctcaattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaagacactcaaaacta-ttttctctctctttcatttat 2571489  T
Q  101 tcactttttcttaatagttgtgaaa 125  Q
     || ||||||||||||  |||||||    
T  2571490 acattttttcttaatatgtgtgaaa 2571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24131480 - 24131317
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| |  ||  ||| ||   || |||||||||||||||||  |||||||||||    
T  24131480 actcccaattcaatatattatactttgcatttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctc--tctttcactta 24131383  T
Q  100 ttcactttttcttaatagttgtgaaatga-acaaaaagctcatttataattggacggagggagtat 164  Q
    | | |||||||||||||  ||||||||||  ||||   |||| ||| ||| |||||||||||||||    
T  24131382 tacgctttttcttaataagtgtgaaatgagtcaaatgactcagttaaaatgggacggagggagtat 24131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37281077 - 37280987
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttc 90  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| |||||||||| ||||| ||||||||    
T  37281077 actcccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaaagacactcaaaatcatttctctctttc 37280987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 16956582 - 16956687
Alignment:
Q  12 aatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcactttttc 110  Q
    |||||||||||||||  ||||||||||| ||||||||||  | ||  | | ||| ||||||||| ||||||||||||| ||||||||||| |||||||||    
T  16956582 aatatattctactttatatttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttttctcttcctttcacttatacactttttc 16956681  T
Q  111 ttaata 116  Q
    ||||||    
T  16956682 ttaata 16956687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27210047 - 27209939
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||||||||||||| |||| ||||||||||||  ||||||||| || ||  || |||| |||||||||| ||||||||||| ||||||| |||    
T  27210047 actctcaattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcattta 27209948  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  27209947 tacactttt 27209939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 3160747 - 3160604
Alignment:
Q  21 tactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcactttttcttaatagtt 119  Q
    |||||||||||||||||||  || |||||| || ||  ||||||   |||||||| |||||||||| | |||||||||||| |||||||||||||||  |    
T  3160747 tactttgcatttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttctttctctttcacttatacactttttcttaataagt 3160648  T
Q  120 gtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||||||||   ||  ||||| ||| ||| ||||||||||||||    
T  3160647 gtgaaatgagtcaagggctcagttaaaatgggacggagggagta 3160604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37925326 - 37925206
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttt----tctctttctttca 95  Q
    |||| ||||||||||||||||||||||||||||||||||  || |||||| || ||| ||| || | |||| |||| ||||||    ||||| |||||||    
T  37925326 actctcaattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcatttttctctctctctctttca 37925227  T
Q  96 cttattcactttttcttaata 116  Q
    ||||| |||||||||||||||    
T  37925226 cttatacactttttcttaata 37925206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 34813950 - 34814107
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||||||||||||  |  ||||||  | ||  | |||| |||||| ||||| |||||||||| || |||||| || ||     
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaataca- 34814048  T
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||||||||||  |||||||||| ||||||  ||| ||| | | ||||||||||||||    
T  34814049 tttttcttaataagtgtgaaatgagcaaaaaattcacttaaattgggacggagggagta 34814107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 45305886 - 45305955
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaa 75  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| | ||  |||||| ||||||||||    
T  45305886 caattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaagacactcaaaa 45305955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 11425945 - 11425786
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||| | || ||  | ||||| ||||||||||| |||||||||| || |||||| ||  |    
T  11425945 ccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctctccttcactaatata 11425846  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
     ||||||||||||   ||||||||| ||||  ||||| ||| | | |||||||||||||||    
T  11425845 -tttttcttaataaacgtgaaatgagcaaatggctcaattaaattgggacggagggagtat 11425786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 36232865 - 36232761
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||| || ||  || |||| |||||||||| ||||||||||| ||||||  |||| ||    
T  36232865 ccaattcaatatattctactttatatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcgtttataca 36232766  T
Q  104 ctttt 108  Q
    |||||    
T  36232765 ctttt 36232761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 4466230 - 4466072
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaac-actcaaaaccatttttctctttctttcacttattca 103  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||| | || ||  | |||||   ||||||| |||||||||||| || |||||| ||  |    
T  4466230 ccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctctcattcactaatata 4466131  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||||||||||  |||||||||||||||  ||||| ||| | | ||||||||||||||    
T  4466130 -tttttcttaataagtgtgaaatgaacaaatggctcaattaaattgggacggagggagta 4466072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14352594 - 14352677
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccattttt 83  Q
    ||||||||||||||||||||||||||  ||||| |||||  ||||||||| || ||  ||||||| ||||||||||||||||||    
T  14352594 actcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccattttt 14352677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 16040109 - 16040267
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||| | || ||  | ||||| ||||| |||||||||||||||| || || ||| ||  |    
T  16040109 ccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgactaatata 16040208  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||||||||||  |||||||||| ||||   |||| ||| | ||||||||||||||||    
T  16040209 -tttttcttaataaatgtgaaatgagcaaatgactcaattaaatttggacggagggagta 16040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 46273194 - 46273345
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||| |||| |||||||||| |||||| |||||  |||||||||||| ||  |||||||| || ||||||  |||||||| | |  |||| |||| || |    
T  46273194 aatttaatacattctactttacatttaagataaagaagaatgcatcaatacttgacaaaaacattcaaaattatttttctatcttattcatttatacatt 46273293  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggag 157  Q
    ||||||||||| |||| |||| |||||||| |||| |||||||  |||||||    
T  46273294 ttttcttaatatttgtcaaattaacaaaaaactcacttataatgagacggag 46273345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 29678859 - 29678933
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatt 80  Q
    ||||||||||||||| |||||||||||| |||||  | |||||||||| ||  | ||||||||||||||||||||    
T  29678859 caattcaatatattcaactttgcatttacgataataatgaatgcatcaatacttaacaaaacactcaaaaccatt 29678933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40754493 - 40754378
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagta-aatgacaa-aacactcaaaaccatttttctctttctttcactt 98  Q
    |||| ||||| ||||||||||||||||||||||||||||  ||||||||| || ||   ||| ||   ||||||||||||  ||||||| ||||||||||    
T  40754493 actctcaatttaatatattctactttgcatttatgataaagaagaatgcaccaataggttgataagggcactcaaaacca--tttctctctctttcactt 40754396  T
Q  99 attcactttttcttaata 116  Q
    || |||||||||||||||    
T  40754395 atacactttttcttaata 40754378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 49662832 - 49662675
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaag-aatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||| |||||||||||||||| ||||||||||| || | ||| || || ||  ||| || |  ||||||| |||||||||||  ||||||||||| ||    
T  49662832 ccaatttaatatattctactttgaatttatgataa-taggtaatacaccaatacttgagaagatgctcaaaatcatttttctct--ctttcacttataca 49662736  T
Q  104 cttttt-cttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||| ||||||| ||||||||| ||||||| |||| |||||||| |||| || ||||||    
T  49662735 tttttttcttaatatttgtgaaataaacaaaaggctcgtttataatgggacagatggagta 49662675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2886199 - 2886247
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgc 49  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  2886199 actctcaattcaatatattctactttgcatttatgataaagaagaatgc 2886247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12267711 - 12267664
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatg 48  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||    
T  12267711 actcccaattcaatatattctactttacatttatgataaagaagaatg 12267664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33149301 - 33149388
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctct 87  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||| || || ||| | | ||  ||||||||| ||||||||||||    
T  33149301 actctcaattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccatttttctct 33149388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31798446 - 31798484
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  31798446 actctcaattcaatatattctactttgcatttatgataa 31798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 35622855 - 35622773
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctct 87  Q
    |||||||||||||||||||||||||||||| | ||| | |||||||||| ||   ||||| ||| ||||||| |||| |||||    
T  35622855 ccaattcaatatattctactttgcatttatcacaagaaggaatgcatcaatactcgacaagacattcaaaactatttctctct 35622773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51749263 - 51749225
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  51749263 actcccaattcaatatattccactttgcatttatgataa 51749225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 26760372 - 26760469
Alignment:
Q  68 actcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    |||||||  ||||||||||| |||||||||||| || ||||||||||||  ||||||||||   ||| ||||  ||| ||| |||||||| |||||||    
T  26760372 actcaaactcatttttctctctctttcacttatacattttttcttaataagtgtgaaatgagtcaaaggctcggttaaaatgggacggagagagtata 26760469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28839367 - 28839404
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  28839367 actcccaattcaatatattccactttgcatttatgata 28839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 36326258 - 36326177
Alignment:
Q  28 catttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcactttt 108  Q
    ||||||||||||  ||||||||| || ||  ||||||| ||||||||||||||| |||||| ||||||| |||| |||||||    
T  36326258 catttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctctctttcatttatacactttt 36326177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37495857 - 37495906
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||||||||||| ||||||| ||||  |||||||||    
T  37495857 actcccaattcaatatattctactttacatttataataaagaagaatgca 37495906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 46496052 - 46496133
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctct 87  Q
    |||||||||||||| ||||||||||||||||||   ||||| ||||| |   | |||| |||||||||||||||||||||||    
T  46496052 aattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaacactcaaaaccatttttctct 46496133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51049536 - 51049585
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||    
T  51049536 actcccaattcaatatattatactttacatttatgataaaaaagaatgca 51049585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 2219524 - 2219476
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatca 53  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||||||    
T  2219524 ccaattcaatatattttactttacatttatgataaagaagaatgcatca 2219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19349074 - 19348991
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttct 85  Q
    |||| ||||||||||||||||| |||||||||||||||| |  ||||||| || ||  |||||| || |||||||| ||||||||    
T  19349074 actctcaattcaatatattctattttgcatttatgataa-ttggaatgcaccaatacttgacaagacgctcaaaacaatttttct 19348991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 25983702 - 25983550
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    ||||||| |||||||| ||||||||||||||||  | ||||||| || ||  | | || ||||| ||||| ||||| |    |||||||||||| |||||    
T  25983702 aattcaacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataagacacttaaaacaattttac----tctttcacttatacactt 25983607  T
Q  107 tttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    ||||||||||  |||| |||||||||||  |||| ||| |||  ||||||| ||||||    
T  25983606 tttcttaatatgtgtg-aatgaacaaaagactcagttaaaatgagacggagagagtat 25983550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 39420673 - 39420749
Alignment:
Q  59 tgacaaaacactcaaaaccatttttctctttctttcacttattcactttt-tcttaatagttgtgaaatgaacaaaa 134  Q
    |||||| ||||||||||  |||||||||| ||||||| |||| ||||||| ||||||||   |||||||||||||||    
T  39420673 tgacaagacactcaaaattatttttctctctctttcatttatacacttttttcttaatatgcgtgaaatgaacaaaa 39420749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52382466 - 52382414
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatca 53  Q
    |||| |||||||||||||| |||||| ||||||||||||  ||||||||||||    
T  52382466 actctcaattcaatatattttactttacatttatgataaagaagaatgcatca 52382414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 3555633 - 3555598
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||| |||||||||||||||||    
T  3555633 tcccaattcaatatattccactttgcatttatgata 3555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17724794 - 17724707
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctct 87  Q
    ||||||||||||||| ||||||||||||||||||| ||    ||||||||||| ||| | |||| | |||| ||||| ||||||||||    
T  17724794 actcccaattcaataaattctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaatttttctct 17724707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 27831874 - 27831997
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||| ||| ||||||||||||||||||    ||||||| || ||  ||||||   |||| ||||| |||||||||  ||||||||| |    
T  27831874 actcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctc--tctttcactca 27831971  T
Q  100 ttcactttttcttaatagttgtgaaat 126  Q
    | ||| ||||||||||| |||||||||    
T  27831972 tgcac-ttttcttaatatttgtgaaat 27831997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 34332217 - 34332271
Alignment:
Q  79 tttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||||||| |||||||||||| || ||||||||||||  ||||||||||||||||    
T  34332217 tttttctctctctttcacttataca-tttttcttaatatgtgtgaaatgaacaaaa 34332271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 42309517 - 42309589
Alignment:
Q  59 tgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaa 133  Q
    |||||| ||||| ||||||||||||| ||  |||||||||||  | ||||||||||||  |||||||||||||||    
T  42309517 tgacaacacacttaaaaccatttttcact--ctttcacttatatattttttcttaatatatgtgaaatgaacaaa 42309589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 5442372 - 5442501
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||||||||||| |||||||||||||||||    ||||||||  | ||  | |||| |  ||| |||||||||||||||| || |||| |||| ||    
T  5442372 ccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccatttttctctctcattcatttataca 5442471  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaa 134  Q
     ||| ||||||||| ||||||||||| ||||    
T  5442472 -tttgtcttaataggtgtgaaatgaaaaaaa 5442501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 13409786 - 13409724
Alignment:
Q  72 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||| ||||||||||| |||||||||||  | ||||||||||||  ||||||||||| ||||    
T  13409786 aaaactatttttctcttcctttcacttatatattttttcttaatatatgtgaaatgaataaaa 13409724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 21304880 - 21304760
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcact 105  Q
    ||||||||||||| ||||||  |||||||||||  || ||||||||| ||  ||||||| |||||||||| || |||| ||| ||||||| |||| || |    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaa-caattttatctctctttcatttataca-t 21304783  T
Q  106 ttttcttaatagttgtgaaatga 128  Q
    ||||||||||   ||||||||||    
T  21304782 ttttcttaatttatgtgaaatga 21304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 28706698 - 28706616
Alignment:
Q  7 aattcaatatattctactttg-catttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctct 87  Q
    |||||||||||||||| |||  ||||||||||||  || ||||||||| ||  |||||||  |||||||||||||||||||||    
T  28706698 aattcaatatattctatttttacatttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctct 28706616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 30903299 - 30903269
Alignment:
Q  9 ttcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||    
T  30903299 ttcaatatattctactttgcatttatgataa 30903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34877170 - 34877132
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  34877170 actcacaattcaatatattcaactttgcatttatgataa 34877132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40061837 - 40061875
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  40061837 actctcaattcaatatattctaatttgcatttatgataa 40061875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44580544 - 44580582
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  44580544 actcctaatttaatatattctactttgcatttatgataa 44580582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13500809 - 13500772
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  13500809 actcccaattcaatattttccactttgcatttatgata 13500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 27391380 - 27391413
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||| ||||||||||||||||||    
T  27391380 caattcaatatattccactttgcatttatgataa 27391413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31634371 - 31634261
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||||||||||||||  |||||||| ||||||||||||  | |||||||||| ||  | ||||| ||||||  |||||||||||||| ||||| | |||    
T  31634371 actcccaattcaatat--tctactttacatttatgataaagaggaatgcatcaatacttaacaaagacactc--aaccatttttctctctcttttattta 31634276  T
Q  100 ttcactttttcttaat 115  Q
    | || |||||||||||    
T  31634275 taca-tttttcttaat 31634261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32348246 - 32348283
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  32348246 actcccaattcaatatattccactttgcatttgtgata 32348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 35947032 - 35946936
Alignment:
Q  66 acactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||||||||  ||||||||| ||||||||||||| || ||||| |||||| || | ||||||||||||  |||  ||||||| | ||| ||||||||    
T  35947032 acactcaaaattatttttctcgttctttcacttataca-ttttttttaatatttataaaatgaacaaaagactcgcttataatggaacgaagggagta 35946936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43895875 - 43895912
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  43895875 actctcaattcaatatattcaactttgcatttatgata 43895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 50086043 - 50086084
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatg 48  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  50086043 aattcaatatattctactttacatttatgataaagaagaatg 50086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 32587793 - 32587920
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||  ||||||||||||||||||   | ||||||||| ||  | || |||||||| ||||  ||||||||||  | |||| |||    
T  32587793 actctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcattta 32587892  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || ||||||||||||  ||||||||||    
T  32587893 taca-tttttcttaatatgtgtgaaatga 32587920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 45889322 - 45889290
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||| ||||||||||||||||||    
T  45889322 aattcaatatattccactttgcatttatgataa 45889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 47293675 - 47293599
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatt 80  Q
    |||||||||||||||||| |||  |||||||||||  ||||||||| || ||  |||| ||||||||||||| ||||    
T  47293675 ccaattcaatatattctaatttatatttatgataaagaagaatgcaccaatacttgacaaaaacactcaaaatcatt 47293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35988662 - 35988824
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||| || ||  |||||| ||||| ||||| |||||||||| | ||||||||||    
T  35988662 actcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaacacacttaaaactatttttctctctgtttcacttat 35988761  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
      | ||||||||||||  ||||||||||| |||| | ||||||| ||  | ||||||||||||    
T  35988762 aaattttttcttaatatatgtgaaatgaaaaaaaggttcatttaaaacggaacggagggagta 35988824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 25111224 - 25111067
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| ||||||||||| |||||||||  |||||||||| | |     
T  25111224 ccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctc--tctttcacttttact 25111127  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||  |||||||||| ||||| ||||| ||||||| |||| |||||||||    
T  25111126 ccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatgggacagagggagta 25111067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 25170315 - 25170158
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||||||| ||||||||||| |||||||||  |||||||||| | |     
T  25170315 ccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctc--tctttcacttttact 25170218  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||  |||||||||| ||||| ||||| ||||||| |||| |||||||||    
T  25170217 ccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatgggacagagggagta 25170158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 5147570 - 5147413
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||||||||||||||||||||||  ||||||||| || ||  ||| ||  |||||||||| ||||||||||||||||||||||||  | |    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatatt 5147471  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||||||||||  ||||||||||   |||  |||| ||| ||| ||||||||||||||    
T  5147470 ttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagggagta 5147413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13016443 - 13016316
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| || ||  ||| ||  |||||||||  ||||||||||| ||||||||||     
T  13016443 actcccaattcaatatattctactttgcatttatgataa-agagaatgcaccaatagttgataaggacactcaaactcatttttctctctctttcacttt 13016345  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | |||||||||||||||  ||||||||||    
T  13016344 tacactttttcttaataagtgtgaaatga 13016316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 25108605 - 25108762
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||| || ||  | ||||| ||||||||||| |||||||||  |||||||||| | |     
T  25108605 ccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctc--tctttcacttttact 25108702  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||  ||||||||||  |||| ||||| ||||||| |||| |||||||||    
T  25108703 ccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatgggacagagggagta 25108762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 25167697 - 25167854
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||| || ||  | ||||| ||||||||||| |||||||||  |||||||||| | |     
T  25167697 ccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctc--tctttcacttttact 25167794  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||  ||||||||||  |||| ||||| ||||||| |||| |||||||||    
T  25167795 ccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatgggacagagggagta 25167854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13087821 - 13087694
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||| || ||  ||| ||  |||||||||  ||||||||||| ||||||||||     
T  13087821 actctcaattcaatatattctactttgcatttatgataaaga-gaatgcaccaatagttgataaggacactcaaactcatttttctctctctttcacttt 13087723  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | |||||||||||||||  ||||||||||    
T  13087722 tacactttttcttaataagtgtgaaatga 13087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 16926167 - 16926006
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatttttctctttctttcactta---t 100  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| || ||  | || ||  ||||||||||||||||||||  |||||||||||   |    
T  16926167 ccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcacttatact 16926068  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||| || ||||||  |||||||||| ||||| | ||| ||||||| ||||||||||||||    
T  16926067 acacttctt-ttaatatgtgtgaaatgagcaaaagggtcaattataatgggacggagggagta 16926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6629473 - 6629316
Alignment:
Q  1 actcccaattcaatatatt-ctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||| |||||||| | ||||||||||||| ||||  ||||||||| || ||  |||||| ||||||||||| |||||   || ||||||| |||    
T  6629473 actcccaatttaatatatttccactttgcatttataataaaaaagaatgcaccaatacttgacaagacactcaaaactatttt---ctctctttcattta 6629377  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggaggga 160  Q
    | |||||||||||||||  ||||||| ||| |||| |||||  || ||| |||||||||||    
T  6629376 tacactttttcttaatatgtgtgaaaagaaaaaaaggctcagataaaatgggacggaggga 6629316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39061034 - 39060903
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||||||  |||   ||||||  |||||||||  ||||||||||| |||||||||||    
T  39061034 actcctaattcaatatattctactttgcatttatgataaagaagaatgcactagtggttgacaaggacactcaaactcatttttctctctctttcactta 39060935  T
Q  100 ---ttcactttttcttaatagttgtgaaatga 128  Q
       | || ||||||||||||  ||||||||||    
T  39060934 tactacattttttcttaataagtgtgaaatga 39060903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 42818938 - 42819059
Alignment:
Q  8 attcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcactt 106  Q
    ||||||||||||||||||| ||||||||||||  ||||||||| || | | | | ||   ||||||||||||||||||| | ||||| |||||| |||||    
T  42818938 attcaatatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttctttctcttttacttatacactt 42819037  T
Q  107 tttcttaatagttgtgaaatga 128  Q
    ||||||||||  ||||||||||    
T  42819038 tttcttaataagtgtgaaatga 42819059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 4475278 - 4475434
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||||| || ||| ||||||||||||||||||    ||||||| || ||  ||||||  |||||||| |  ||||||||||||||||||||||| ||    
T  4475278 ccaattcaacattttccactttgcatttatgataatggtgaatgcaccaatacttgacaaggacactcaaca--atttttctctttctttcacttataca 4475375  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||  |||| ||||||||||| ||||| |||| || |||||||| |||||    
T  4475376 c-ttttcttaatatgtgtgcaatgaacaaaatgctcacttattatgggacggagagagta 4475434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 31196347 - 31196475
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||| |||||||||||||||||||| ||| ||||  || |||||| || ||||||||||  ||||||||||| |||||||| | ||||||| |||    
T  31196347 actctcaatccaatatattctactttgcatgtataataaagaaaaatgcagcaataaatgacaaggacactcaaaactatttttctatctctttcattta 31196446  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | ||  |||||||||||  ||||||||||    
T  31196447 tacatattttcttaataagtgtgaaatga 31196475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38978932 - 38979096
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||| ||||||||||||||||||||||||||||  | ||||| | || ||  | | ||   ||||||||||||||||||| | |||||| |||     
T  38978932 actctcaatttaatatattctactttgcatttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttttctatctctttcccttg 38979031  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | |||||||||||||||  ||||||||||  |||  ||||| ||| ||| |||||||||||||||    
T  38979032 tacactttttcttaataagtgtgaaatgagtaaatggctcagttaaaatgggacggagggagtat 38979096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 39212630 - 39212501
Alignment:
Q  2 ctcccaattcaatatattctactttgcatttatgataa-gtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||| || ||  ||||||  |||||  ||| |||||||||  ||||||||||||    
T  39212630 ctcccaattcaatatattctactttgcatttatgataatgggggaatgcaccaatacttgacaaggcactc--aacaatttttctc--tctttcacttat 39212535  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaa 134  Q
     || ||||||||||||   |||||||||||||||    
T  39212534 acaatttttcttaatatgcgtgaaatgaacaaaa 39212501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11099557 - 11099430
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||| |||||| ||||||||||    |||||||| || ||  | || |||||||| ||||| |||||||||| ||||||| |||    
T  11099557 actcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcattta 11099458  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || ||||||||||||  ||||||||||    
T  11099457 taca-tttttcttaatatgtgtgaaatga 11099430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15898219 - 15898271
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatca 53  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  15898219 actctcaattcaatatattctactttgcatttatgataaagaagaatgcatca 15898271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31090332 - 31090448
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||| |||||||||||||||| ||||||||||  ||||||||| || ||  ||| ||   ||||||||| ||||||||||| | |||||||||    
T  31090332 actctcaattccatatattctactttgcgtttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctctttttcactta 31090431  T
Q  100 ttcactttttcttaata 116  Q
    | || ||||||||||||    
T  31090432 tacattttttcttaata 31090448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 5357893 - 5357735
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||| | || ||  | ||||| |||||||||||||||||||||| || |||||| ||  |    
T  5357893 ccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcactaatata 5357794  T
Q  104 ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
     ||||||||||||  |||| ||||| ||||  | ||| ||| | | ||||||||||||||    
T  5357793 -tttttcttaataagtgtgtaatgagcaaatggttcaattaaattgggacggagggagta 5357735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 4194975 - 4195088
Alignment:
Q  16 tattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac-tttttctta 113  Q
    ||||||||||| ||||||||||||  |||||||||||| ||  | | ||   ||||||||||||||||||||| ||||| |||||| ||| |||||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctctctcttttacttatacacttttttctta 4195074  T
Q  114 atagttgtgaaatg 127  Q
    |||  |||||||||    
T  4195075 ataagtgtgaaatg 4195088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 16283667 - 16283535
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||| |||||||||||||||||  | |||||||| || || || |||||| || | |||||||||||| ||| || |||| |||    
T  16283667 actctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccatttttttctctccttcattta 16283568  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaa 133  Q
    | || ||||| ||||||  |||||||||| ||||    
T  16283567 taca-ttttttttaatacatgtgaaatgatcaaa 16283535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 72127 - 72030
Alignment:
Q  72 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataagtttt 171  Q
    ||||| ||||| |||||||||| |||| | || |||||||||||   ||||||||||||| ||| |||| ||| ||| ||||||||||||||||| ||||    
T  72127 aaaactattttactctttcttttacttgtacattttttcttaatg--tgtgaaatgaacataaacctcagttaaaatgggacggagggagtataattttt 72030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15564968 - 15564845
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||| ||||||||||||||||||||||||||||     |||||| || ||  ||| ||    ||||||||  |||||||||| |||||||||||    
T  15564968 actctcaatttaatatattctactttgcatttatgataa-----aatgcaccaatagttgataagggtactcaaaattatttttctctctctttcactta 15564874  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | |||||||||||||||  ||||||||||    
T  15564873 tacactttttcttaataagtgtgaaatga 15564845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 4044554 - 4044508
Alignment:
Q  4 cccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||    
T  4044554 cccaattcaatatattctactttacatttatgataaagaagaatgca 4044508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35334606 - 35334569
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35334606 actcccaattcaatatattccactttgcatttatgata 35334569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 5072979 - 5073027
Alignment:
Q  2 ctcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  5072979 ctcccaattcaatatattttactttacatttatgataagaaaaaatgca 5073027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 7311254 - 7311222
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||    
T  7311254 aattcaatatattctactttgcatttatgataa 7311222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10044696 - 10044804
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||| |||||||| | |||||| ||||||||||||  |||||||||||| ||  ||| ||| ||||||||||| |||||||||| | ||||  |||    
T  10044696 actctcaaatcaatatactttactttacatttatgataaaaaagaatgcatcaatacttgaaaaatacactcaaaactatttttctctctatttccttta 10044795  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  10044796 tacactttt 10044804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 41815503 - 41815420
Alignment:
Q  170 ttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatt-tatttagtacacttgtctgacacgtgtc 253  Q
    |||||||||| ||||||||| ||| ||||||||||  | ||||||| ||||| ||| ||||||  ||||||||||||||||||||    
T  41815503 ttatataggtgttggacaccggtcaaaggagtgtccgagtaaagga-aaaataattgtatttaaaacacttgtctgacacgtgtc 41815420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 72185 - 72146
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataag 40  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  72185 actcctaatttaatatattctactttgcatttatgataag 72146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6173060 - 6173022
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  6173060 actcacaattcaatatattatactttgcatttatgataa 6173022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 15898610 - 15898668
Alignment:
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||||||||||  |||||||||||| |||  |||||||| ||| ||||||||||||||    
T  15898610 tttttcttaataagtgtgaaatgaactaaagactcatttaaaatgggacggagggagta 15898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 20189925 - 20189975
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagta 56  Q
    ||||||||||||||| ||||| ||||||||||||   ||||||||||||||    
T  20189925 caattcaatatattccactttacatttatgataatggagaatgcatcagta 20189975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 36006968 - 36006890
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttt 82  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||  | ||  ||||||| ||||| |||||||||||    
T  36006968 ccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccatttt 36006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13135781 - 13135818
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13135781 actcctaattcaatatattccactttgcatttatgata 13135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17243034 - 17242997
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  17243034 actctcaattcaatatattccactttgcatttatgata 17242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 19889608 - 19889575
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||||| ||||||||||||    
T  19889608 caattcaatatattctactttacatttatgataa 19889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 25344813 - 25344780
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||||| ||||||||||||    
T  25344813 caattcaatatattctactttacatttatgataa 25344780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33988228 - 33988265
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  33988228 actcccaattcaatatattccactttacatttatgata 33988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39183707 - 39183670
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  39183707 actctcaattcaatatattccactttgcatttatgata 39183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 42575714 - 42575681
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||| |||||||||||||||||    
T  42575714 ccaattcaatatattccactttgcatttatgata 42575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 146780 - 146748
Alignment:
Q  1 actcccaattcaatatattctactttgcattta 33  Q
    |||| ||||||||||||||||||||||||||||    
T  146780 actctcaattcaatatattctactttgcattta 146748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 7179555 - 7179527
Alignment:
Q  6 caattcaatatattctactttgcatttat 34  Q
    |||||||||||||||||||||||||||||    
T  7179555 caattcaatatattctactttgcatttat 7179527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 8369771 - 8369739
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  8369771 caattcaatatattccactttgcatttatgata 8369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 19889581 - 19889541
Alignment:
Q  58 atgacaaaacactcaaaaccatttttctctttctttcactt 98  Q
    |||| ||||||||||||||||||| ||||| ||||||||||    
T  19889581 atgataaaacactcaaaaccatttctctctctctttcactt 19889541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 26330282 - 26330314
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||| ||||||||||||||||||    
T  26330282 aattcaatatattccactttgcatttatgataa 26330314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 36446762 - 36446730
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||| ||||||||||||||||||    
T  36446762 caattcaatatattatactttgcatttatgata 36446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 314460 - 314618
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| ||  ||| ||   |||||||||||||||| |||| |||||||||||| |||    
T  314460 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacac 314559  T
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||||||||||  ||||||||||   ||  ||||| ||| ||| ||||||||||||||    
T  314560 tttttcttaataagtgtgaaatgagtcaatcgctcagttaaaatgggacggagggagta 314618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31592578 - 31592686
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||||| || ||  |||||| |||||| |||| |||||||||| ||||||||||||    
T  31592578 actctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaagacactcgaaactatttttctctctctttcacttat 31592677  T
Q  101 tcacttttt 109  Q
     ||||||||    
T  31592678 acacttttt 31592686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25604389 - 25604493
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| || | | | |||| ||||||||||| |||||||||| ||||||||||||    
T  25604389 actcccaattcaatatattctaatttgcatttatgataagaaagaatgcaccaat-acttacaagacactcaaaactatttttctctctctttcacttat 25604487  T
Q  101 tcactt 106  Q
     |||||    
T  25604488 acactt 25604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 13026602 - 13026762
Alignment:
Q  8 attcaatatattctactttgcatttatgataagtaagaatgcatcagtaaa---tgacaaaacactcaaaaccatttttctctttctttcacttattcac 104  Q
    |||||||||||| || | ||||||||||||||| |||||| ||||| ||     |||||| ||||||||||  |||||||| |||||||||||||| ||     
T  13026602 attcaatatattttattatgcatttatgataagaaagaatacatcaatactacttgacaagacactcaaaattatttttctttttctttcacttatacaa 13026701  T
Q  105 tttt-tcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    |||| ||||||||  ||||||||||||||||| |||| ||| ||| |||| ||||||||||    
T  13026702 ttttttcttaataaatgtgaaatgaacaaaaacctcagttaaaataggacagagggagtat 13026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2048320 - 2048447
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||| || ||  ||| || | |||||| |||||||||||||| |||||||||||    
T  2048320 actctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcactta 2048419  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || ||||| ||||||  ||||||||||    
T  2048420 taca-ttttttttaataagtgtgaaatga 2048447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40710605 - 40710717
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||||||||| ||||||||||| ||||||||| |||||||||  | ||  |||||||||||||||||| |||||||||| | ||||||||||    
T  40710605 actctcaattcaatatatgctactttgcatgtatgataaggaagaatgcacgaatatttgacaaaacactcaaaactatttttctctctttttcacttat 40710704  T
Q  101 tcactttttctta 113  Q
      | |||||||||    
T  40710705 agattttttctta 40710717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 12950026 - 12949880
Alignment:
Q  18 ttctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatag 117  Q
    ||||||||||||||||||||||  | |||| || || ||  |||||| ||||||||||  |||||| ||| |||||||||||| || |||||| |||||     
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaagacactcaaaattatttttttctctctttcacttatacattttttcgtaatat 12949927  T
Q  118 ttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
     |||||||||||||||| ||||  ||||||| | | |||||||||||    
T  12949926 atgtgaaatgaacaaaaggctccattataatggaatggagggagtat 12949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 9724909 - 9725033
Alignment:
Q  4 cccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattc 102  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||| |||| ||||||||| ||||| ||||| ||||||| |||| |    
T  9724909 cccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttatac 9725008  T
Q  103 actttttcttaatagttgtgaaatga 128  Q
    || |||||||||||  ||||||||||    
T  9725009 ac-ttttcttaatatgtgtgaaatga 9725033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6972619 - 6972492
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||  | ||  ||| ||   |||||||||||| |||||||| |||||||||||    
T  6972619 actctcaattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaacca-ttttctctctctttcactta 6972521  T
Q  100 ttcactttttcttaatagttgtgaaatga 128  Q
    | || ||||||||||||  ||||||||||    
T  6972520 tacattttttcttaataagtgtgaaatga 6972492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 5425887 - 5426020
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttct--ttcacttat 100  Q
    ||||||||||||||||||| ||| |||||||||| | | |  ||| || || ||  |||||| ||||||||||| ||| |||||| |||  |||||||||    
T  5425887 tcccaattcaatatattctgcttcgcatttatgacagggagaaatacaccaatacttgacaatacactcaaaactattattctctctctctttcacttat 5425986  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaa 134  Q
     |||||||||||||||  ||||||||||||||||    
T  5425987 acactttttcttaatacgtgtgaaatgaacaaaa 5426020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 13222100 - 13222222
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattca 103  Q
    ||||||||||||||| |||||||||||||||||||  |||||| || || ||  ||| ||   |||||||| |||||||||||| |||||||||||| ||    
T  13222100 ccaattcaatatattttactttgcatttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctctctctttcacttataca 13222199  T
Q  104 ctttttcttaatagttgtgaaat 126  Q
     ||||||||||||  ||||||||    
T  13222200 ttttttcttaataagtgtgaaat 13222222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 18181290 - 18181184
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttatt 101  Q
    ||||||||||| ||||||||||||||||||||||||    |||||||| || || || |||||| |||| |||||||||||||||| ||| ||||||||     
T  18181290 tcccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttata 18181191  T
Q  102 cactttt 108  Q
    |||||||    
T  18181190 cactttt 18181184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 44424337 - 44424244
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    ||||||||||||||| ||||||||||||||||||  || ||||||||| ||  |||||| ||| ||||||||| |||||||| ||||||||||||    
T  44424337 caattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaagacattcaaaacca-ttttctctctctttcacttat 44424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 41849256 - 41849335
Alignment:
Q  162 tataagttttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatttatttagtacacttgt 241  Q
    ||||||| |||||||||| | |||||||||||||||||||||| |||||||  ||||||| | |||||||| ||||||||    
T  41849256 tataagtgttatataggtgtcggacaccagtccaaggagtgtcgaaataaaaaagaaaataacttatttaggacacttgt 41849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 9472455 - 9472576
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||| | ||||||||||||  ||||||| |||| ||  ||||||| |||||| |||||||| |||| | ||||||| |||| ||     
T  9472455 caattcaatatattctactatacatttatgataaagaagaatgtatcaatacttgacaaagacactctaaaccattgttctatctctttcatttataca- 9472553  T
Q  105 tttttcttaatagttgtgaaatg 127  Q
    ||||||||||||  |||||||||    
T  9472554 tttttcttaatatgtgtgaaatg 9472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18460516 - 18460624
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||| ||||||||| ||  ||||||| | || ||  ||||||| |||||||||| ||||||||| | ||||||| |||    
T  18460516 actctcaattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcatttttctatctctttcattta 18460615  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  18460616 tacactttt 18460624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24356139 - 24356247
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||||||| ||  ||| |||  |||||||||| | |||||||| ||||||  |||    
T  24356139 actcccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaactagttttctctctctttccttta 24356238  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  24356239 tacactttt 24356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3199926 - 3200039
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    ||||||||||||||||||| ||||||||||||||||||   || ||||||  | ||  | ||||  |||||||||||||||||||||| ||||||| |||    
T  3199926 actcccaattcaatatattatactttgcatttatgata---aaaaatgcacaaatagttaacaatgacactcaaaaccatttttctctctctttcattta 3200022  T
Q  100 ttcactttttcttaata 116  Q
    | ||  |||||||||||    
T  3200023 tacatcttttcttaata 3200039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26273787 - 26273825
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26273787 actcccaattcaatatattctactttgcatttatgataa 26273825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 38872999 - 38872848
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||  |||||  |||||||||||  | |||||||||| ||  ||| ||  |||||||||||||||||| | | |||| |||||     
T  38872999 actcccaattcaatatatt--actttatatttatgataaagaggaatgcatcaatagttgataaggacactcaaaaccatttttttttctcttccacttt 38872902  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggac 153  Q
    | |||||||||||||||  | |||||||| |||||| |||| ||| || |||||    
T  38872901 tacactttttcttaataagtatgaaatgagcaaaaaactcaattaaaaatggac 38872848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 2427388 - 2427521
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||  || ||| | | ||   || ||||| |||||||||||| | | ||| |||    
T  2427388 actcccaattcaatatattctactttgcatttatgacaaagaagaatgctccaataattaataagggcattcaaacccatttttctctatatgtcagtta 2427487  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaa 133  Q
    | |||||||||||||||  | |||||||| ||||    
T  2427488 tacactttttcttaataaatatgaaatgagcaaa 2427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43427165 - 43427116
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  43427165 actcccaattcaatatattctattttgcatttatgataaagaagaatgca 43427116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 1908569 - 1908473
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatg-acaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||  | ||  || | || |||||||||||||||||||||| | ||||| ||||    
T  1908569 ccaattcaatatattctactttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttttctctctatttcatttat 1908473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 6213923 - 6213796
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||| ||||||||||||||||||||||||||||     |||| | || ||  |||| | |||||| |||| |||||||||||||| |||||| ||||| |    
T  6213923 aattgaatatattctactttgcatttatgataatggtaaatgaagcaatacttgacgagaacacttaaaatcatttttctctttcattcactaattca-t 6213825  T
Q  106 ttttcttaatagttgtgaaatgaacaaaa 134  Q
    |||||||||||  |||||||||| |||||    
T  6213824 ttttcttaataagtgtgaaatgagcaaaa 6213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 7213503 - 7213669
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||| ||||| ||||||| ||||  ||||||||| || ||  ||| |||  ||||||||| ||||||||||| | ||||| |||    
T  7213503 actctcaattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcattta 7213602  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataag 167  Q
    | || |||||||||||   ||||||||||  |||  ||||| ||| | | |||| |||||||||||||    
T  7213603 taca-tttttcttaatctgtgtgaaatgagaaaatggctcaattaaactgggaccgagggagtataag 7213669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 43950522 - 43950400
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatttttctctttctttcacttattcac 104  Q
    |||||||||||||||||||||||||||||| |||   | ||| ||||| ||  | || |||||| | ||||| |||||||||| |||||||||||| ||     
T  43950522 caattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcacttataca- 43950424  T
Q  105 tttttcttaatagttgtgaaatga 128  Q
    ||||| ||||||  ||||||||||    
T  43950423 ttttttttaataagtgtgaaatga 43950400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4794606 - 4794676
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaa 75  Q
    ||||||||||||||| ||||||||||||||||||  || ||||||||| ||  |||||| |||||||||||    
T  4794606 caattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttgacaagaacactcaaaa 4794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 8550715 - 8550621
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||  ||||||||||||||||||   ||||||||  | ||  |||||| |||||| ||||||| |||||||| ||||||||||||    
T  8550715 aattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaaccacttttctctctctttcacttat 8550621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 27001594 - 27001752
Alignment:
Q  8 attcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacac---tcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||||| ||||||     |||||| || ||| |||||||| |    | |||||||||| ||| | || |||||  || ||     
T  27001594 attcaatatattctactttgcatttgtgataatggtaaatgcaccaataattgacaaaagaaaaattaaaaccatttctctatctccttcaccaataca- 27001692  T
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    |||||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||||||||    
T  27001693 tttttcttaatagt-gtgaaatgaacaaaatgctcacttaaattgggacggagggagtata 27001752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 928606 - 928490
Alignment:
Q  12 aatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcactttttc 110  Q
    ||||||||||| ||||||||||||||||  ||||||||| || ||  ||| |||  |||||||| |||||||| | | |||||||||||| |  ||||||    
T  928606 aatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaacccattttt-tttctctttcacttatacgttttttc 928508  T
Q  111 ttaatagttgtgaaatga 128  Q
    ||||||  ||||||||||    
T  928507 ttaataagtgtgaaatga 928490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 14384121 - 14384057
Alignment:
Q  70 tcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    |||||||||||||||||| ||||||| ||||  | ||||||||||||  | ||||||||||||||    
T  14384121 tcaaaaccatttttctctctctttcatttatatattttttcttaatatgtatgaaatgaacaaaa 14384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 19515914 - 19516001
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttc 94  Q
    |||||||||||||| |||||||||||||||||||  || |||| | || ||  |||||| ||||| ||||| |||||||||| ||||||    
T  19515914 caattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttgacaagacact-aaaactatttttctctctctttc 19516001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 8385111 - 8385242
Alignment:
Q  9 ttcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttt 108  Q
    ||||||||||| || ||| ||||||||||||  |  |||| | || ||  |||||| ||||||||||| |||||| |||   ||||| |||| || ||||    
T  8385111 ttcaatatattatattttacatttatgataatgagaaatgaaacaatacttgacaagacactcaaaacaatttttttctacttttcatttatacattttt 8385210  T
Q  109 tcttaatagttgtgaaatgaacaaaaagctca 140  Q
    ||||||||   ||||||||||||||| |||||    
T  8385211 tcttaatacgcgtgaaatgaacaaaatgctca 8385242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 31348545 - 31348588
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  31348545 aattcaatatattctactatgcatttatgataaaaaagaatgca 31348588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39166775 - 39166728
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatg 48  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||    
T  39166775 actcccaattcaatatattatactttacatttatgataaaaaagaatg 39166728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 7650049 - 7649999
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagta 56  Q
    ||||||||||||||| |||||||||||||||||    ||||||||||||||    
T  7650049 caattcaatatattccactttgcatttatgatagtggagaatgcatcagta 7649999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10069664 - 10069626
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  10069664 actctcaattcaatatattcgactttgcatttatgataa 10069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 32200737 - 32200640
Alignment:
Q  170 ttatataggttttggacaccagtccaaggagtgtcaaaataaaggagaaaatcatttatttagtacacttgtctgacacgtgtcggacaccgcgacacg 268  Q
    |||||||||| |||| ||||  ||  ||||||||| || ||||| | ||||||| |||||||| ||||  ||  |||||||||||||||||||||||||    
T  32200737 ttatataggtgttgggcaccgatcgtaggagtgtcgaagtaaagaa-aaaatcaattatttaggacaccagttcgacacgtgtcggacaccgcgacacg 32200640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 32556272 - 32556330
Alignment:
Q  72 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaa 133  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||||  |||||||||||||||    
T  32556272 aaaaccatttttctct--ctttcacttatacactttt-cttaatatgtgtgaaatgaacaaa 32556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7931575 - 7931526
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||| |||||||||||||| |||||| ||||||||||||  |||||||||    
T  7931575 actctcaattcaatatattttactttacatttatgataaagaagaatgca 7931526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 39095664 - 39095697
Alignment:
Q  6 caattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||| ||||||||||||||||||    
T  39095664 caattcaatatattccactttgcatttatgataa 39095697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 44024755 - 44024784
Alignment:
Q  10 tcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||||||||||||||||    
T  44024755 tcaatatattctactttgcatttatgataa 44024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 44534558 - 44534525
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||| |||||||||||||||||    
T  44534558 ccaattcaatatattccactttgcatttatgata 44534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 883159 - 883100
Alignment:
Q  73 aaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaa 133  Q
    ||||||||||||| | |||||||||||| ||| ||||||||| |  |||||||||||||||    
T  883159 aaaccatttttctttctctttcacttatacac-ttttcttaaaatgtgtgaaatgaacaaa 883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 5212032 - 5212000
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  5212032 caattcaatatattccactttgcatttatgata 5212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 6685738 - 6685706
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgat 37  Q
    |||||||||||||||||||||| ||||||||||    
T  6685738 ccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 41436112 - 41436144
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  41436112 caattcaatatattccactttgcatttatgata 41436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 43056405 - 43056441
Alignment:
Q  3 tcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  43056405 tcccaattcaatatattatactttacatttatgataa 43056441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 593 - 749
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||| |||||||||||||| |||||||||||  ||||||||| || ||  ||| || ||||||||||||| |||||||| | ||||||||||    
T  593 actctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataagacactcaaaaccaattttctctctttttcacttat 692  T
Q  101 tcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggag 157  Q
     ||||||||||||||| |||| |||||||| || |||||| ||| ||| | ||||||    
T  693 acactttttcttaataattgtaaaatgaaccaagagctcagttaaaatggaacggag 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 9218173 - 9218297
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||| || ||  | || | ||||||||||| |||||||||| ||||||||||||    
T  9218173 actctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatacttaacgagacactcaaaactatttttctctctctttcacttat 9218272  T
Q  101 tcactttttcttaatagttgtgaaa 125  Q
     |||||||||||||||  |||||||    
T  9218273 acactttttcttaatatgtgtgaaa 9218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 44219108 - 44218949
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcac 104  Q
    ||||||||||||||||||||||| |||||||||||    ||||||| ||  |  | |||| |||||||||||||||||||||||||||| |||||| |||    
T  44219108 ccaattcaatatattctactttgtatttatgataatggggaatgcaccaacactt-acaagacactcaaaaccatttttctctttctttgacttatacac 44219010  T
Q  105 tttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    ||||||||||||  ||||||||||||||||  ||   |||| || ||||||||||||||||    
T  44219009 tttttcttaatatgtgtgaaatgaacaaaagactgggttattatgggacggagggagtata 44218949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 30261574 - 30261420
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactt 106  Q
    |||||||||||||| ||||| ||||||||||||| | ||||||| || ||  ||||||  || ||||||| |||||||||| |||||||||||  ||||     
T  30261574 aattcaatatattccactttacatttatgataagaaggaatgcaccaatacttgacaagccagtcaaaactatttttctctctctttcactta--cactc 30261477  T
Q  107 tttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||||||||   ||||||||||||||| ||||| ||| ||| ||||||||||||||    
T  30261476 tttcttaatatgcgtgaaatgaacaaaaggctcagttaaaatgggacggagggagta 30261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39329829 - 39329665
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||  | |||| ||| ||||||| |||| ||| | ||||||||||||    
T  39329829 actctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttatctttctctttcacttat 39329730  T
Q  101 tcactttttcttaatagttgtgaaatg-aacaaaaagctcatttataattggacggagggagtat 164  Q
     || ||||||||||||  ||||||| | || ||||||||||  || ||  |||||||||||||||    
T  39329729 acattttttcttaatatgtgtgaaaagaaaaaaaaagctcagataaaacgggacggagggagtat 39329665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 53583634 - 53583476
Alignment:
Q  6 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||| |||||||||||||||||||||| ||||  |||||||||||| ||  |||||| ||| ||||||| |||||||| | ||||||  |||| ||||    
T  53583634 caattccatatattctactttgcatttataataatgaagaatgcatcaatacttgacaacacattcaaaactatttttctatctctttcttttatacact 53583535  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    |||||||| ||   |||||||| ||||||  |||| ||||||| | |||||||||||||    
T  53583534 ttttcttagtacacgtgaaatggacaaaagactcacttataatagaacggagggagtat 53583476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41287290 - 41287390
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||| ||||||||||||  || ||||||||| ||  ||||||| | | |||||||||||||||||| |||||||||||    
T  41287290 actctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaaccatttttctctctctttcactta 41287389  T
Q  100 t 100  Q
    |    
T  41287390 t 41287390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42547185 - 42547061
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 100  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||| || ||  | |||| ||| ||||||| |||||| ||| ||||| ||||||    
T  42547185 actcccaattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttttttctctcttttacttat 42547086  T
Q  101 tcactttttcttaatagttgtgaaa 125  Q
      | ||||||||||||  |||||||    
T  42547085 aaattttttcttaatatgtgtgaaa 42547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1923118 - 1923275
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||  |  ||| ||   |||   ||||||||||||||||  |||||||||    
T  1923118 actcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaacagttgataagggcac---aaaccatttttctctt--tttcactta 1923212  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    | |||||||||||||||  |||||||||| | ||  ||||| ||| ||| ||||||||||||||    
T  1923213 tacactttttcttaataagtgtgaaatgagc-aagggctcagttaaaatgggacggagggagta 1923275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 7886174 - 7886270
Alignment:
Q  66 acactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaac-aaaaagctcatttataattggacggagggagtat 164  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||   ||| |||||||| ||||| |||| ||||||| |||||||||||||||    
T  7886174 acactcaaaac-atttttctct--ctttcacttattcactttttcttaatttgtgtaaaatgaacaaaaaaactcacttataatgggacggagggagtat 7886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46194285 - 46194160
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcactta 99  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||| ||  |  ||| ||   |||||||| |||||||||||| ||||| |||||    
T  46194285 actctcaattcaatatattctactttgcatttatgataaaga-gaatgcaccaacagttgataagggcactcaaacccatttttctctctctttaactta 46194187  T
Q  100 ttcactttttcttaatagttgtgaaat 126  Q
    | |||||||||||||||  ||||||||    
T  46194186 tacactttttcttaataagtgtgaaat 46194160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 45267285 - 45267168
Alignment:
Q  16 tattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcactttttcttaat 115  Q
    ||||||| ||||||||||||||||| | ||||| |||| ||  ||| |||| ||||||||| || ||||||  |||||||||| | || |||||||||||    
T  45267285 tattctattttgcatttatgataagaatgaatgaatcaatatttgataaaatactcaaaactatctttctc--tctttcacttgtacattttttcttaat 45267188  T
Q  116 agttgtgaaatgaacaaaaa 135  Q
    |  |||||||||||| ||||    
T  45267187 atgtgtgaaatgaaccaaaa 45267168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 48409612 - 48409778
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaacca--tttttctctttctttcact 97  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||| || || ||  ||||||| ||||||||||| |  ||| ||||| ||||||| |    
T  48409612 actcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctttctctctctctttcatt 48409711  T
Q  98 tattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
    ||| || ||||||||||||  ||||||| |  |||  |||||| ||| | | ||||||||||||||||    
T  48409712 tataca-tttttcttaatatgtgtgaaaagctcaactagctcagttaaattgggacggagggagtata 48409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51164980 - 51165088
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||||||||||||||||||| ||||||||||||  ||||||||| || ||  ||| ||| ||||||||||  |||||||||| ||||| | |||    
T  51164980 actccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaattatttttctctctcttttattta 51165079  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  51165080 tacactttt 51165088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 54021537 - 54021429
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    ||||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||  ||| ||| |||||||||| ||||||||||| ||||| | |||    
T  54021537 actccgaattcaatatattctactttacatttataataaagaagaatgcaacaatatttgataaagacactcaaaatcatttttctctctcttttattta 54021438  T
Q  100 ttcactttt 108  Q
    | |||||||    
T  54021437 tacactttt 54021429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 53754137 - 53754034
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||||||||| ||||||||||||  ||||||||| || ||  |  |||| |||||||||| ||||||||||| | ||||| |||| ||||    
T  53754137 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttttctctctatttcatttatacact 53754038  T
Q  106 tttt 109  Q
    ||||    
T  53754037 tttt 53754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 36315725 - 36315651
Alignment:
Q  89 tctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    ||||| |||||| |||||||||||||||  |||| ||||| ||||||||| | ||||||| ||||||||||||||    
T  36315725 tcttttacttatacactttttcttaatatgtgtggaatgagcaaaaagcttagttataataggacggagggagta 36315651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1334860 - 1334811
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  1334860 actcccaattcaatatattctactttacatttatgataaagaagaatgca 1334811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 24618940 - 24618873
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||||||||  ||||||| || |||||    
T  24618940 cacttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaacgagcaaaa 24618873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 29858938 - 29858864
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatt 80  Q
    |||||||||||||||||||| ||||||||||||  ||||||| | || ||  |||| ||||||||||||||||||    
T  29858938 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgacaaaaacactcaaaaccatt 29858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 39144770 - 39144852
Alignment:
Q  83 tctctttctttcacttattcactttt-tcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    ||||| |||||||||||| || |||| ||||||||  |||||||||||||||| ||||| ||||||| ||| |||| ||||||    
T  39144770 tctctctctttcacttatacatttttttcttaatatgtgtgaaatgaacaaaaggctcacttataatgggatggagagagtat 39144852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21296578 - 21296545
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||||||||||||||||||||||    
T  21296578 ccaattcaatatattctactttgcatttatgata 21296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 21585485 - 21585392
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcact 97  Q
    ||||| |||||||||||| ||| ||||||||||||  ||||||| | || ||| | ||||| |||||||||| ||||||||||| || ||||||    
T  21585485 ccaatacaatatattctattttacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcact 21585392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53051054 - 53051103
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgca 50  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||    
T  53051054 actcccaattcaatatattatactttacatttatgataaacaagaatgca 53051103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 49122207 - 49122175
Alignment:
Q  7 aattcaatatattctactttgcatttatgataa 39  Q
    |||||||||||||||||||||||||||||||||    
T  49122207 aattcaatatattctactttgcatttatgataa 49122175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 47684832 - 47684902
Alignment:
Q  63 aaaacactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaa 134  Q
    ||||||||||||||||||||   || |||||||||| | ||| |||||||||||  ||||||||||||||||    
T  47684832 aaaacactcaaaaccattttaa-ctctctttcacttgtacaccttttcttaatatgtgtgaaatgaacaaaa 47684902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40732505 - 40732471
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatg 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  40732505 actcccaattcaatatcttctactttgcatttatg 40732471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15280633 - 15280670
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  15280633 actcccaattcaatatattccactttccatttatgata 15280670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26134782 - 26134745
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||||||||||||||||||  |||||||||||||||||    
T  26134782 actcccaattcaatatatttcactttgcatttatgata 26134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 38524352 - 38524263
Alignment:
Q  20 ctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttattcacttttt 109  Q
    |||||||| ||||||||| |  || ||| ||||| ||  ||| |||||| ||||||| |||||||| |||||||||||||| || |||||    
T  38524352 ctactttgtatttatgatgatgaaaaatacatcaatacttgataaaacattcaaaactatttttctttttctttcacttatacatttttt 38524263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 51636903 - 51636843
Alignment:
Q  72 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaa 133  Q
    |||||||||||||||| || ||||||||  || |||||||||||| || |||||||||||||    
T  51636903 aaaaccatttttctctctccttcacttaaaca-tttttcttaataattatgaaatgaacaaa 51636843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 9017833 - 9017956
Alignment:
Q  5 ccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaa-cactcaaaaccatttttctctttctttcacttattca 103  Q
    |||||||||||||||  ||||||||||||| |||    |||||||| || ||  | |||||| |||| ||||| |||||||||| ||||||| |||| ||    
T  9017833 ccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatttataca 9017932  T
Q  104 ctttttcttaatagttgtgaaatga 128  Q
     ||||| ||||||  ||||||||||    
T  9017933 -ttttttttaatatgtgtgaaatga 9017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 14756188 - 14756156
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||| |||||||||||||||||||||||||||    
T  14756188 caatttaatatattctactttgcatttatgata 14756156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 46786059 - 46786023
Alignment:
Q  2 ctcccaattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||||||  |||||||||||||||||    
T  46786059 ctcccaattcaatatatttcactttgcatttatgata 46786023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 52325210 - 52325242
Alignment:
Q  6 caattcaatatattctactttgcatttatgata 38  Q
    ||||||||||||||| |||||||||||||||||    
T  52325210 caattcaatatattccactttgcatttatgata 52325242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 12509 - 12352
Alignment:
Q  7 aattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcacttattcact 105  Q
    |||||||||||||||||||| ||||||| ||||  |||||||||  | ||  ||||||| ||||||||||||||| ||| || ||||||| |||| |  |    
T  12509 aattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccattattcactctctttcatttatacgtt 12410  T
Q  106 ttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 163  Q
    |||||||||||  |||||||||| | ||  ||||| ||||||| | ||||||||||||    
T  12409 ttttcttaatacgtgtgaaatgagccaattgctcacttataatggaacggagggagta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10870 - 10704
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaa-aacactcaaaaccatttttctctttctttcactta 99  Q
    ||||| ||||||||||||| |||||||||||||||||||  ||||||| | || ||  ||| ||  ||||||||| |||||||||||| |||||||||||    
T  10870 actcctaattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttgataaggacactcaaacccatttttctctctctttcactta 10771  T
Q  100 ttca-ctttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtata 165  Q
      ||  ||||||||||||  |||||||||| | ||   |||| ||| ||| ||||||| ||||||||    
T  10770 cacatttttttcttaataactgtgaaatgagccaatgactcagttaaaatgggacggatggagtata 10704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 352540 - 352379
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctctttctttcactta 99  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||  | ||||| ||||||||||  |||||||||  ||||| | |||    
T  352540 actcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaattatttttctc--tcttttattta 352443  T
Q  100 ttcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtat 164  Q
    | ||| ||||||||||   ||||||||||  ||  |||||| ||| | | |||||||||||||||    
T  352442 tacac-ttttcttaatctgtgtgaaatgataaactagctcaattaaactgggacggagggagtat 352379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6479 - 6365
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgac-aaaacactcaaaaccatttttctctttctttcactta 99  Q
    |||| |||||||||||||| |||||| ||||||||||||  |||||||||||| ||  |||| || |||||||||| ||| | ||||| ||||||  |||    
T  6479 actctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatacttgactaagacactcaaaatcatctctctctctctttccttta 6380  T
Q  100 ttcactttttcttaat 115  Q
    | || |||||||||||    
T  6379 taca-tttttcttaat 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5846 - 5933
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaa-acactcaaaaccatttttctct 87  Q
    |||| ||||||||||||||||||||| ||||||||||||  |  ||||||||| ||  ||| ||| |||||||| | |||||||||||    
T  5846 actctcaattcaatatattctactttacatttatgataaagagcaatgcatcaatacttgataaagacactcaagatcatttttctct 5933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 171254 - 171292
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  171254 actcctaattcaatatattctactttacatttatgataa 171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 220021 - 220059
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgataa 39  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  220021 actctcaattcaatatattctattttgcatttatgataa 220059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26641 - 26678
Alignment:
Q  1 actcccaattcaatatattctactttgcatttatgata 38  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  26641 actcgcaattcaatatattccactttgcatttatgata 26678  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 7932 - 7831
Alignment:
Q  67 cactcaaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagtataa 166  Q
    |||||||||  ||||||||||  |||||| |||| || ||||||||||||  ||||||||||   ||  ||||| ||| ||| ||||||||||||||| |    
T  7932 cactcaaaataatttttctct--ctttcatttatacattttttcttaataaatgtgaaatgagtcaagggctcaattaaaataggacggagggagtatga 7835  T
Q  167 gttt 170  Q
    ||||    
T  7834 gttt 7831  T

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