View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3074_low_58 (Length: 293)
Name: NF3074_low_58
Description: NF3074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3074_low_58 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 277
Target Start/End: Original strand, 2710669 - 2710930
Alignment:
| Q |
16 |
tgtgtaattctatcatcatgtctatccgactttaggaattagtgtatataaatgatcgcaaatatatataatttatcctaataaaagaaaagtagtagcc |
115 |
Q |
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| T |
2710669 |
tgtgtaattctatcatcatatctatccgactttaggaattagtgtatataaatgatcgcaaatatatataacttatcctaataaaagaaaagtagtagcc |
2710768 |
T |
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| Q |
116 |
aagttggtctaagaaggttcattgtcctagagttggaggggtgcaataaatgactgcatccaaagacaagaagaaagtggatatagacctcacaaggttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2710769 |
aagttggtctaagaaggttcattgtcctagagttggaggggtgcaataaatgactgcatccaaagacaagaagaaagtggatatagacctcacaaggttc |
2710868 |
T |
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| Q |
216 |
tatcatgtgtttgattattatagcctgttaggtggtgctggtcacgtatgtctcatggatat |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2710869 |
tatcatgtgtttgattattatagcctgttaggtggtgctggtcacgtatgtctcatggatat |
2710930 |
T |
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