View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3074_low_81 (Length: 227)
Name: NF3074_low_81
Description: NF3074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3074_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 46787430 - 46787631
Alignment:
| Q |
18 |
actagtcctctttatcttgttccaagtaaaagagaataaactttttatcaggtacataaccttcatcttttaagtgtttcagcaaaccagacaaaaccca |
117 |
Q |
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| T |
46787430 |
actagtcctctttatcttgttccaagtaaaagagaataaactttttatcaggtacataaccttcatcttttaagtgtttcagcaaaccagacaaaaccca |
46787529 |
T |
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| Q |
118 |
gaatataacatcagcttccggatgcaatttgtcccctaccacaaaactattgactttcttttctatctcaatccaacttatacctacttcctttgctact |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46787530 |
gaatataacatcagcttccggatgcaatttgtcccctaccacaaaactattgactttcttttctatctcaatccaacttatacctacttcttttgctact |
46787629 |
T |
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| Q |
218 |
cc |
219 |
Q |
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|| |
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| T |
46787630 |
cc |
46787631 |
T |
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