View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3078_low_40 (Length: 201)
Name: NF3078_low_40
Description: NF3078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3078_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 43075195 - 43075006
Alignment:
| Q |
1 |
cttctgtacctctctgcttcttcatcaacgaccgttcaatggaacttaaaatgctacaatgtaagtaacatacacttcaccttcttaactttgaaccaat |
100 |
Q |
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| T |
43075195 |
cttctgtacctctctgcttcttcatcaatgaccgttcaatggaacttaaaatgctacaatgtaagtaacatacacttcaccttcttaactttgaaccaat |
43075096 |
T |
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| Q |
101 |
aataaataaagggtcacaatccttgtgtttctttgttttcatgcttttggctataatgtttggttttgatgatatttttgttacagtatt |
190 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43075095 |
aataaataaagggtcactatccttgtgtttctttgttttcatgcttttggctataatgtttggttttgatgatatttttgttacagtatt |
43075006 |
T |
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