View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3081_high_6 (Length: 357)

Name: NF3081_high_6
Description: NF3081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3081_high_6
NF3081_high_6
[»] chr1 (40 HSPs)
chr1 (19-351)||(39855571-39855902)
chr1 (19-351)||(38043532-38043863)
chr1 (19-346)||(23344065-23344392)
chr1 (19-346)||(40531785-40532109)
chr1 (19-346)||(49260015-49260340)
chr1 (21-312)||(15355163-15355442)
chr1 (186-345)||(33285778-33285936)
chr1 (19-171)||(24268878-24269031)
chr1 (103-346)||(14440779-14441021)
chr1 (19-171)||(35585432-35585576)
chr1 (19-144)||(17684869-17684991)
chr1 (19-171)||(35186552-35186697)
chr1 (19-207)||(37779669-37779849)
chr1 (237-346)||(12789795-12789904)
chr1 (19-114)||(12789913-12790008)
chr1 (19-113)||(33285984-33286078)
chr1 (195-333)||(14172187-14172324)
chr1 (209-344)||(19161980-19162114)
chr1 (195-333)||(36911532-36911670)
chr1 (193-263)||(49398305-49398374)
chr1 (195-263)||(41803870-41803937)
chr1 (298-332)||(29760604-29760638)
chr1 (108-239)||(39063403-39063535)
chr1 (195-329)||(42570226-42570359)
chr1 (209-267)||(44336415-44336472)
chr1 (217-263)||(48228169-48228215)
chr1 (195-333)||(49924956-49925093)
chr1 (195-263)||(18974967-18975034)
chr1 (249-321)||(19260996-19261068)
chr1 (297-333)||(27485133-27485169)
chr1 (195-263)||(51271427-51271494)
chr1 (195-262)||(46141937-46142003)
chr1 (209-263)||(13634035-13634088)
chr1 (298-344)||(49429100-49429146)
chr1 (209-333)||(44598756-44598879)
chr1 (195-267)||(6437376-6437447)
chr1 (190-266)||(17373818-17373893)
chr1 (195-263)||(26633697-26633764)
chr1 (187-267)||(27485199-27485277)
chr1 (297-333)||(44336349-44336385)
[»] chr7 (25 HSPs)
chr7 (19-351)||(22292397-22292728)
chr7 (19-351)||(43349721-43350050)
chr7 (19-346)||(20876401-20876727)
chr7 (39-351)||(17184752-17185061)
chr7 (19-346)||(42736538-42736856)
chr7 (21-170)||(2205767-2205916)
chr7 (19-95)||(15900013-15900089)
chr7 (84-171)||(15899871-15899959)
chr7 (190-290)||(4231088-4231187)
chr7 (190-266)||(1641042-1641117)
chr7 (195-333)||(36392224-36392362)
chr7 (195-263)||(15309812-15309879)
chr7 (209-263)||(10524182-10524235)
chr7 (195-265)||(21185792-21185861)
chr7 (195-333)||(28112882-28113019)
chr7 (209-267)||(34142509-34142566)
chr7 (211-265)||(48272308-48272361)
chr7 (195-265)||(48314830-48314899)
chr7 (195-262)||(46860671-46860737)
chr7 (209-263)||(17840741-17840794)
chr7 (209-267)||(40590400-40590457)
chr7 (209-263)||(45257881-45257934)
chr7 (299-344)||(20566273-20566318)
chr7 (299-344)||(45257970-45258015)
chr7 (297-333)||(45361723-45361759)
[»] chr2 (26 HSPs)
chr2 (19-351)||(5421881-5422212)
chr2 (19-346)||(37311049-37311373)
chr2 (19-346)||(23719432-23719759)
chr2 (19-346)||(24107104-24107431)
chr2 (19-312)||(17537275-17537567)
chr2 (19-346)||(34520052-34520376)
chr2 (19-333)||(10358896-10359210)
chr2 (19-171)||(6978380-6978532)
chr2 (93-171)||(33405449-33405528)
chr2 (195-333)||(43493121-43493258)
chr2 (195-333)||(23409341-23409475)
chr2 (209-266)||(14181684-14181740)
chr2 (209-333)||(39798542-39798665)
chr2 (298-333)||(3943130-3943165)
chr2 (209-267)||(22003252-22003309)
chr2 (28-70)||(33405318-33405360)
chr2 (299-344)||(45435146-45435191)
chr2 (195-263)||(35493178-35493245)
chr2 (195-263)||(40675906-40675973)
chr2 (209-264)||(29090745-29090799)
chr2 (211-265)||(2917840-2917893)
chr2 (217-267)||(8268608-8268657)
chr2 (209-263)||(41497642-41497695)
chr2 (300-344)||(22003342-22003386)
chr2 (195-263)||(23786295-23786362)
chr2 (211-267)||(34639166-34639221)
[»] chr6 (17 HSPs)
chr6 (19-351)||(12398346-12398676)
chr6 (82-207)||(32133092-32133217)
chr6 (209-333)||(34801603-34801727)
chr6 (35-95)||(32133257-32133317)
chr6 (196-333)||(14124556-14124692)
chr6 (195-263)||(35019746-35019813)
chr6 (209-267)||(13616406-13616463)
chr6 (240-333)||(17126853-17126946)
chr6 (210-267)||(32026127-32026183)
chr6 (299-344)||(32691273-32691318)
chr6 (297-333)||(29076261-29076297)
chr6 (297-333)||(29109794-29109830)
chr6 (297-333)||(29111234-29111270)
chr6 (209-333)||(30763416-30763539)
chr6 (195-263)||(13404469-13404536)
chr6 (297-333)||(29068203-29068239)
chr6 (297-333)||(29083450-29083486)
[»] chr4 (40 HSPs)
chr4 (19-351)||(22438182-22438511)
chr4 (19-346)||(36774796-36775121)
chr4 (19-320)||(2774570-2774861)
chr4 (19-346)||(43887585-43887889)
chr4 (19-170)||(2567579-2567730)
chr4 (19-346)||(51026140-51026449)
chr4 (19-167)||(45941066-45941214)
chr4 (190-321)||(9718972-9719102)
chr4 (84-171)||(17045336-17045423)
chr4 (19-92)||(14968877-14968950)
chr4 (93-171)||(10315630-10315709)
chr4 (190-334)||(4909920-4910063)
chr4 (195-333)||(33383904-33384041)
chr4 (195-333)||(49572738-49572874)
chr4 (195-316)||(49422206-49422326)
chr4 (195-329)||(51426640-51426775)
chr4 (209-333)||(56140541-56140664)
chr4 (195-267)||(955956-956027)
chr4 (84-144)||(14968760-14968820)
chr4 (209-344)||(21015827-21015961)
chr4 (19-86)||(21171018-21171086)
chr4 (195-263)||(44558818-44558885)
chr4 (197-333)||(9491123-9491258)
chr4 (190-333)||(21410231-21410374)
chr4 (209-263)||(28083841-28083894)
chr4 (91-137)||(49816058-49816104)
chr4 (216-265)||(37959588-37959636)
chr4 (19-60)||(47873587-47873628)
chr4 (299-344)||(55799469-55799514)
chr4 (297-333)||(1044482-1044518)
chr4 (237-333)||(24076739-24076835)
chr4 (195-267)||(34528330-34528401)
chr4 (300-344)||(40352424-40352468)
chr4 (195-267)||(4783811-4783879)
chr4 (298-344)||(28083929-28083975)
chr4 (217-267)||(40352501-40352550)
chr4 (216-321)||(8866864-8866968)
chr4 (299-344)||(41793452-41793497)
chr4 (37-80)||(17045440-17045484)
chr4 (195-267)||(39590404-39590475)
[»] chr3 (50 HSPs)
chr3 (19-346)||(42321814-42322139)
chr3 (39-351)||(11377327-11377637)
chr3 (19-351)||(44929019-44929354)
chr3 (19-312)||(10051724-10052015)
chr3 (19-346)||(51016842-51017170)
chr3 (19-312)||(34470434-34470725)
chr3 (74-320)||(51011684-51011928)
chr3 (19-346)||(50457582-50457910)
chr3 (19-312)||(49274967-49275239)
chr3 (19-170)||(47759469-47759620)
chr3 (19-171)||(46412794-46412946)
chr3 (19-170)||(30194090-30194241)
chr3 (19-137)||(14633026-14633136)
chr3 (116-327)||(27096093-27096303)
chr3 (190-332)||(45098905-45099046)
chr3 (190-266)||(20374378-20374453)
chr3 (195-333)||(43571520-43571659)
chr3 (195-263)||(44490515-44490582)
chr3 (93-170)||(27188725-27188802)
chr3 (221-333)||(43478692-43478803)
chr3 (195-264)||(46345095-46345163)
chr3 (19-63)||(51011922-51011966)
chr3 (195-263)||(55267585-55267652)
chr3 (209-263)||(2267225-2267278)
chr3 (209-263)||(36136449-36136502)
chr3 (209-263)||(50998505-50998558)
chr3 (299-344)||(2645544-2645589)
chr3 (190-263)||(52567928-52568000)
chr3 (209-333)||(13894326-13894449)
chr3 (195-263)||(24700891-24700958)
chr3 (297-333)||(49217190-49217226)
chr3 (195-263)||(55205437-55205504)
chr3 (195-262)||(2430114-2430180)
chr3 (190-333)||(18441954-18442096)
chr3 (190-333)||(19487028-19487170)
chr3 (216-267)||(34645726-34645776)
chr3 (298-333)||(51693978-51694013)
chr3 (209-267)||(3493750-3493807)
chr3 (209-267)||(3497444-3497501)
chr3 (28-70)||(27188582-27188624)
chr3 (299-344)||(2267144-2267189)
chr3 (299-344)||(2950454-2950499)
chr3 (307-344)||(3493677-3493714)
chr3 (307-344)||(3497371-3497408)
chr3 (299-344)||(4002802-4002847)
chr3 (209-265)||(41579584-41579640)
chr3 (299-344)||(46406531-46406576)
chr3 (195-263)||(7247707-7247774)
chr3 (209-261)||(8397736-8397787)
chr3 (297-333)||(16484393-16484429)
[»] chr5 (32 HSPs)
chr5 (21-346)||(36348716-36349039)
chr5 (19-346)||(1696286-1696611)
chr5 (84-351)||(41088215-41088480)
chr5 (19-351)||(7483839-7484151)
chr5 (19-329)||(40936984-40937283)
chr5 (19-346)||(1972929-1973245)
chr5 (107-312)||(6791842-6792045)
chr5 (89-239)||(4722518-4722669)
chr5 (92-171)||(11357187-11357266)
chr5 (92-171)||(11356974-11357053)
chr5 (184-333)||(25499713-25499861)
chr5 (19-67)||(4722714-4722762)
chr5 (19-67)||(41088471-41088519)
chr5 (209-344)||(27660028-27660162)
chr5 (209-267)||(5961-6018)
chr5 (209-267)||(8574886-8574943)
chr5 (195-265)||(18309894-18309963)
chr5 (193-263)||(20199994-20200063)
chr5 (19-67)||(6792057-6792105)
chr5 (298-344)||(8539481-8539527)
chr5 (209-267)||(38855562-38855619)
chr5 (195-263)||(541093-541160)
chr5 (209-265)||(3603009-3603064)
chr5 (297-333)||(30887315-30887351)
chr5 (297-333)||(41798918-41798954)
chr5 (209-268)||(11028855-11028913)
chr5 (237-268)||(23190720-23190751)
chr5 (300-338)||(8574815-8574853)
chr5 (299-344)||(11348441-11348486)
chr5 (299-344)||(19035326-19035371)
chr5 (297-333)||(1398703-1398739)
chr5 (195-267)||(41201893-41201964)
[»] chr8 (25 HSPs)
chr8 (19-292)||(26488007-26488281)
chr8 (19-267)||(19241143-19241389)
chr8 (19-267)||(19314327-19314573)
chr8 (182-351)||(26488290-26488458)
chr8 (19-170)||(42167471-42167622)
chr8 (84-346)||(38032297-38032556)
chr8 (19-67)||(38032547-38032595)
chr8 (195-265)||(38872778-38872847)
chr8 (209-333)||(41276736-41276859)
chr8 (195-267)||(22550701-22550772)
chr8 (209-267)||(41016579-41016636)
chr8 (209-267)||(45066212-45066269)
chr8 (216-265)||(18438791-18438839)
chr8 (195-332)||(41855464-41855600)
chr8 (216-268)||(31170580-31170631)
chr8 (209-263)||(42605085-42605138)
chr8 (209-267)||(44052076-44052133)
chr8 (299-344)||(15030972-15031017)
chr8 (299-344)||(22519502-22519547)
chr8 (297-334)||(26455613-26455650)
chr8 (307-344)||(45066309-45066346)
chr8 (249-325)||(14120558-14120634)
chr8 (219-263)||(28168463-28168506)
chr8 (195-263)||(40703997-40704063)
chr8 (297-333)||(44052163-44052199)
[»] scaffold0859 (1 HSPs)
scaffold0859 (190-333)||(1999-2141)
[»] scaffold0192 (1 HSPs)
scaffold0192 (195-265)||(16559-16628)
[»] scaffold0176 (1 HSPs)
scaffold0176 (209-267)||(3434-3491)
[»] scaffold0094 (1 HSPs)
scaffold0094 (299-338)||(144-183)
[»] scaffold0199 (1 HSPs)
scaffold0199 (209-257)||(10853-10900)


Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 351
Target Start/End: Complemental strand, 39855902 - 39855571
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  39855902 acaattcatctaatcataaaaattctaccataatttcataaaaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 39855803  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||    
T  39855802 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacaaaaaaaaa-ctatcaaatcaatcacaaaatagcaacgcaataggat 39855704  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39855703 tcaaaaaacttacttgatttttgtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 39855604  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| |||||||||||| ||||||||||| ||||    
T  39855603 ttggaaactcctatgctgttttgttcatatcac 39855571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 351
Target Start/End: Complemental strand, 38043863 - 38043532
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||     
T  38043863 acaactcatctaatcctaaaaattctaccataatttcataacaattcttcaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaat 38043764  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |||    
T  38043763 ctaaactatcataacatcataaaatcaataaacctctataatcacaatttaacaaaaaaaaaaatatcaaatcaatcacaaaatagcaacgcaataggat 38043664  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38043663 tcaaaaaacttacttgatttt-gtgtttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 38043565  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| |||||||||||  || |||||||| ||||    
T  38043564 ttggaaactcctatgttgtgttgttcatatcac 38043532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 23344065 - 23344392
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  23344065 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 23344164  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac-nnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataaga 217  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||           ||| |||||||||||||||||||||| ||||||  |    
T  23344165 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatagaa 23344264  T
Q  218 ttcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagt 317  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  23344265 ttcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgaagt 23344363  T
Q  318 tttgaaaactcctatgcagttttgttcat 346  Q
    |||| |||||||||||  ||| |||||||    
T  23344364 tttggaaactcctatgttgttctgttcat 23344392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 40532109 - 40531785
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||     
T  40532109 acaattcatctaatcttaaaaattctaccataatttcataacaattctacaattcaaacaatctaaacaattctaacctaaacctaacaattcaaacaaa 40532010  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  40532009 ctaaattatcataacatcataaaatcaataaacctctataatcgcaatttaac--aaaaaaaactaacaaatcaatcacaaaatagcaatgcaatatgat 40531912  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| |||| |||||||| ||||| | ||||| | |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  40531911 tcaaaaaacttacttga-ttttatgcttgaatttggcgtagaatgacgtatgctttgtgaaattcgcacctatggaagcaaaacacgtaacaatagagtt 40531813  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||  ||| |||||||    
T  40531812 ttggaaactcctatgttgttatgttcat 40531785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 49260340 - 49260015
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  49260340 acaattcatctaatcctaaaaattttaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 49260241  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||||| |||||||||||||||||| |||||||| ||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  49260240 ctaaactgtcataacatcataaaatcaataaacctatataatcgcaatttaacccaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatatgat 49260141  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||  |||||  ||||| |  | || | ||||||||||||||||||||    
T  49260140 tcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggctgatgtttgctgaaa-acgcacttgagaaatccaaaaacgtaacaatggagtt 49260043  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| ||||| |||||| ||| |||||||    
T  49260042 ttggaaactgctatgctgttctgttcat 49260015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 312
Target Start/End: Complemental strand, 15355442 - 15355163
Alignment:
Q  21 aattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaacct 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  15355442 aattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaatctaaacctaacaattcaaacaacct 15355343  T
Q  121 aaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagattc 220  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||||    
T  15355342 aaactatcaaaacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaataggattc 15355243  T
Q  221 aaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 312  Q
    ||||||  || |||| ||||||           |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15355242 aaaaaatttatttga-ttttgt-----------gcttggaatgacttatgctttgtgaaattcgcacctatggaaacaaaaaacgtaacaat 15355163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 186 - 345
Target Start/End: Complemental strand, 33285936 - 33285778
Alignment:
Q  186 caaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgc 285  Q
    ||||||||||| |||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  33285936 caaatcaatcaaaaaatagcaatgcaataggattcaaaaaacttacttgatttt-gtgcttgaaattggcttggaatggcttatgcattgtgaaattcgc 33285838  T
Q  286 acctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttca 345  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  33285837 acctatggaagcaaaaaacgtaacaatggagttttggaaactcctatgctgttctgttca 33285778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 24269031 - 24268878
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataattt-cataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaa 117  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  24269031 acaattcatctaatcctaaaaattctaccataattttcataacaattctacaattctaacaatctaaacaattctaacctaaatctaacaattcaaacaa 24268932  T
Q  118 cctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    ||||||||||||||||||||||||||| ||||| | |||||||| |||||||||    
T  24268931 cctaaactatcataacatcataaaatcaataaatccctataatcgcaatttaac 24268878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 103 - 346
Target Start/End: Original strand, 14440779 - 14441021
Alignment:
Q  103 taacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnn-ctatcaaatcaatcacaaaa 201  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||           ||| ||||||||||||||||    
T  14440779 taacaattcaaacaacctaaactataataacatcataaaatcaataaatctctataatcgcaatttaacaaaaaaaaaaactaacaaatcaatcacaaaa 14440878  T
Q  202 tagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaa 301  Q
    || ||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||  | || | |||    
T  14440879 taacaatgcaataggattcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggcttat-gcttgtgaaattcgcacctgagaaatccaaa 14440976  T
Q  302 aacgtaacaatggagttttgaaaactcctatgcagttttgttcat 346  Q
    ||| ||||| |||||||||| |||||||||||  |||||||||||    
T  14440977 aacataacagtggagttttggaaactcctatgttgttttgttcat 14441021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 35585576 - 35585432
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35585576 acaattcatctaatactaaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacctaacaattcaaacaac 35585477  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    ||||||||||        |||||||| |||||||||||||||| |||||||||    
T  35585476 ctaaactatc--------ataaaatcaataaacctctataatcgcaatttaac 35585432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 17684991 - 17684869
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  17684991 acaattcatctaatcctaaaaattctaccataattacataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 17684892  T
Q  119 ctaaactatcataacatcataaaatc 144  Q
    |||||||   ||||||||||||||||    
T  17684891 ctaaact---ataacatcataaaatc 17684869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 35186552 - 35186697
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataattt-cataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaa 117  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  35186552 acaattcatctaatcctaaaaattctaccataattttcataacaattctacaattctaacaatctaaacaattctaatctaaacctaacaattcaaacaa 35186651  T
Q  118 cctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    ||||||||        ||||||||||| |||||||||||||||| |||||||||    
T  35186652 cctaaact--------atcataaaatcaataaacctctataatcgcaatttaac 35186697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 37779669 - 37779849
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| | ||||||||||||||||||||||||||        |||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  37779669 acaattcatctaatcctcaaaattctaccataatttcataacaa--------ttctaacaatctaaacaattctaatctaaacctaacaattcaaacaac 37779760  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaa 207  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||| |||          ||| ||||||||||||||||||||||    
T  37779761 ctaaactatcataatatcataaaatcaataaacctctataatcgcaattcaacaaaaaaaaaactaacaaatcaatcacaaaatagcaa 37779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 12789904 - 12789795
Alignment:
Q  237 ttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcag 336  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | |    
T  12789904 ttttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatgaaagcaaaaaacgtaacaatggagttttggaaactcctattctg 12789805  T
Q  337 ttttgttcat 346  Q
    || |||||||    
T  12789804 ttctgttcat 12789795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 12790008 - 12789913
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaa 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  12790008 acaattcatctaatcgtaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaa 12789913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 33286078 - 33285984
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaa 113  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  33286078 acaattcatctaatcctaaaaattctaccataatttaataacaattttacaattctaacaatctaaacaattctaacataaacctaacaattcaa 33285984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 14172324 - 14172187
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||||| ||| || |||||||| |||||||||||||||||||| ||    ||  ||||| ||||||||| |      
T  14172324 cacaaaacaacaatgcaataggattcaaaaaacttacctg-tttttgtgattgaaattggcttggaatggtttgaaattgctgaaaatcgcacctaggag 14172226  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | ||||||||||||||||  ||||||| |||||||||||    
T  14172225 atcaaaaaacgtaacaataaagttttggaaactcctatg 14172187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 344
Target Start/End: Complemental strand, 19162114 - 19161980
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||    |   | ||| |||||||| |||| |  |||||| | |    
T  19162114 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttcaaatgattcaaaatcgcacct-tggataataaaaaatgca 19162017  T
Q  308 acaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||||||||| |||||||||||||||| |||||    
T  19162016 acaatggagttttggaaactcctatgcagttctgttc 19161980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 36911532 - 36911670
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatg-g 293  Q
    ||||||| | ||| ||||||||||||||||||| ||| || |||||||| |||||||||||||| ||||||||    ||  ||||| ||||||||| | |    
T  36911532 cacaaaacaacaatgcaataagattcaaaaaacttacctg-tttttgtgattgaaattggcttgaaatggcttgaaattgctgaaaatcgcacctaggag 36911630  T
Q  294 aagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |   |||||| ||||||||||||||||| |||||| ||||    
T  36911631 atcaaaaaaatgtaacaatggagttttggaaactcatatg 36911670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 49398305 - 49398374
Alignment:
Q  193 atcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||||| | ||| ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||    
T  49398305 atcacaaaacaacaatgcaataagattcaaaaaacttacttg-tttttgtgattgaaattggtttggaatg 49398374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 41803870 - 41803937
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  41803870 cacaaaacaacaatgcaataggattcaaaaaacttactt-atttttgtgattgaaattggcttggaatg 41803937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 332
Target Start/End: Complemental strand, 29760638 - 29760604
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctat 332  Q
    |||||||||||||||||||||||||||||||||||    
T  29760638 aaaaaacgtaacaatggagttttgaaaactcctat 29760604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 39063535 - 39063403
Alignment:
Q  108 attcaaacaacctaaactatcataacatcataaaatccat-aaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagca 206  Q
    |||| |||||||||||||||| ||||||||||| ||| || ||||||||||||||  ||||||||           || |||||||||||||||||||||    
T  39063535 attctaacaacctaaactatcgtaacatcataagatcaataaaacctctataatcgtaatttaaccaaaaaaaaattaacaaatcaatcacaaaatagca 39063436  T
Q  207 acgcaataagattcaaaaaacctacttgatttt 239  Q
    | | |||| ||||  || ||| |||||||||||    
T  39063435 atgtaataggattataacaacttacttgatttt 39063403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 42570359 - 42570226
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| ||||||||||||||||||| |||||| |||||||| ||||||||| ||| ||||| |||    ||  | ||| ||||||||| |      
T  42570359 cacaaaacaacaatgcaataagattcaaaaaacttacttg-tttttgtgattgaaattgactttgaatgacttcaaattgctcaaaatcgcacctaggag 42570261  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcc 329  Q
    |  ||||||| |||||||||||||||| |||||||    
T  42570260 aataaaaaacataacaatggagttttggaaactcc 42570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 44336472 - 44336415
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||    
T  44336472 gcaataggattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 44336415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 48228169 - 48228215
Alignment:
Q  217 attcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||    
T  48228169 attcaaaaaacttacttgttttttgtgattgaaattggcttggaatg 48228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 49925093 - 49924956
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||| | |||||| |||||||| ||||||||||||||||||| |||    ||  | ||| ||||||| | |      
T  49925093 cacaaaacaacaatgcaataggattcaaaaatcttacttg-tttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaaggag 49924995  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |  |||||||| ||||||||||||||| |||||||||||    
T  49924994 aataaaaaacgcaacaatggagttttggaaactcctatg 49924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 18974967 - 18975034
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| | |||||||||||||||||    
T  18974967 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgatcgaaattggcttggaatg 18975034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 19261068 - 19260996
Alignment:
Q  249 aattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttg 321  Q
    |||||||||||||||||||| | || |||| | ||||||||||||||   |||| || |||||||||||||||    
T  19261068 aattggcttggaatggcttaagcttggtgagaatcgcacctatggaaatcaaaaccgcaacaatggagttttg 19260996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 27485169 - 27485133
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  27485169 caaaaaacgtaacaatggagttttggaaactcctatg 27485133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 51271427 - 51271494
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||| ||||| |||||| |||||||| |||||||||||||||||||    
T  51271427 cacaaaacaacaatgcaataggattcataaaacttacttg-tttttgtgattgaaattggcttggaatg 51271494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 46142003 - 46141937
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaat 262  Q
    ||||||| | ||| |||||| ||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  46142003 cacaaaacaacaatgcaataggattcaaaaaactcacttg-tttttgtgattgaaattggcttggaat 46141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 13634088 - 13634035
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  13634088 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatg 13634035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 49429100 - 49429146
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  49429100 aaaaaacgcaacaatggagttttggaaactcctatgctgttatgttc 49429146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 333
Target Start/End: Original strand, 44598756 - 44598879
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    |||||| |||| ||||||| |||||| |||||||  ||||||||||||||||||| |||    |   | ||| |||||||| |||| | |||||||||||    
T  44598756 gcaataggattaaaaaaacttacttg-tttttgttattgaaattggcttggaatgacttgaaatagctcaaaatcgcacct-tggagatcaaaaaacgta 44598853  T
Q  308 acaatggagttttgaaaactcctatg 333  Q
    |||||||||||||  |||||||||||    
T  44598854 acaatggagtttttgaaactcctatg 44598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 6437376 - 6437447
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| |||||||||||  |||||| |||||||| ||||||||| |||| ||||||||    
T  6437376 cacaaaacaacaatgcaataggattcaaaaaatttacttg-tttttgtgattgaaattgacttgtaatggctt 6437447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 17373818 - 17373893
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggct 266  Q
    ||||| |||||| | ||| | |||| ||||||||| || |||||||||||| |||||||||||| || |||||||||    
T  17373818 tcaataacaaaaaatcaatgtaataggattcaaaacacttacttgattttt-tgcttgaaattgactcggaatggct 17373893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 26633764 - 26633697
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||| ||||||| || ||| |||||||| |||||||||||||||||||    
T  26633764 cacaaaacaacaatgcaataggattaaaaaaacttagttg-tttttgtgattgaaattggcttggaatg 26633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 27485277 - 27485199
Alignment:
Q  187 aaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||||| | ||| |||||| |||| ||||||  |||||| |||||||| |||||||||||||||||||||||    
T  27485277 aaatcaaccgcaaaacaacaatgcaataggattaaaaaaat-tacttg-tttttgtgattgaaattggcttggaatggctt 27485199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 44336385 - 44336349
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |||||||||||||||| |||||||| |||||||||||    
T  44336385 caaaaaacgtaacaattgagttttggaaactcctatg 44336349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 22292397 - 22292728
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  22292397 acaattcatctaatccaaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 22292496  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||    
T  22292497 ctaaactatcataacatcataaaatcaataaaactctataatcacaatttaacaaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaataggat 22292596  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22292597 tcaaaaaacttacttgatttt-gtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggattt 22292695  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| |||||||||||  ||||||||||| ||||    
T  22292696 ttggaaactcctatgttgttttgttcatatcac 22292728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 351
Target Start/End: Complemental strand, 43350050 - 43349721
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43350050 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 43349951  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||          |||||||||||||||  |||||||||||||||| |||    
T  43349950 ctaaactatcataacatcataaaatcaataaacctctataatcacaatataac-caaaaaaaactatcaaatcaatca-taaatagcaacgcaataggat 43349853  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43349852 tcaaaaaacttacttga-ttttgtgcttgaaattggcttcgaatggcttatggtttgtgaaattcgcacctatggaaccaaaaaacgtaacaatggagtt 43349754  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| |||||||||||  || |||||||| ||||    
T  43349753 ttggaaactcctatgttgtgttgttcatatcac 43349721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 20876727 - 20876401
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  20876727 acaattcatctaatcctaaaaattctactataatttcataacaattctacaattctaacaatgtaaacaattctaacctaaacctaacaattcaaacaac 20876628  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| ||||||||||| |||||| ||| |||||| |||    
T  20876627 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactaacaaatcaatcaaaaaataacaatgcaataggat 20876528  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20876527 tcaaaaaacttacttga-ttttgtgcttggaattggcttggaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 20876429  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||| | ||| |||||||    
T  20876428 ttggaaactcctatcctgttatgttcat 20876401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 39 - 351
Target Start/End: Original strand, 17184752 - 17185061
Alignment:
Q  39 aattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcat 138  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  17184752 aattctaccataatttcataacaattctacaattctaacaatctaatcaattctaacctaaacctaacaattcaaacaaactaaactatcataacatcat 17184851  T
Q  139 aaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgattt 238  Q
    |||||| | |||||||||||||| |||||||||          ||||||||||||||||||||||||||| || |  ||||| |||||| || |||||||    
T  17184852 aaaatcaacaaacctctataatcgcaatttaacaaaaaaaa--ctatcaaatcaatcacaaaatagcaacacagttggattcgaaaaacttaattgattt 17184949  T
Q  239 ttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagtt 338  Q
    | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||    
T  17184950 t-gtgattgaaattggcttggaatggcttatagtttgtgaaattcgcacctatggaagcaaaaaatgtaacaatggagttttggaaactcctatgctgtt 17185048  T
Q  339 ttgttcatctcac 351  Q
    |||||||| ||||    
T  17185049 ttgttcatatcac 17185061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 42736538 - 42736856
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||| |||||||| ||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||| |||||||||||||||     
T  42736538 acaatttatctaatcctaaaaattctaccataatttcataacaa--------ttctaacaatctaaacaattctaacctaaacctaacaattcaaacaat 42736629  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||| | ||||| |||||||||          ||| |||||||||||||| ||| ||| ||||||||||    
T  42736630 ctaaactatcataacatcataaaatcaataaacctatctaatcgcaatttaac-caaaaaaaactaacaaatcaatcacaatataacaatgcaataagat 42736728  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagc-aaaaaacgtaacaatggagt 317  Q
    | ||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||  |||||  |||||||  | || | ||||||||||||||||||||    
T  42736729 taaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggctgatgtttgctgaaaaacgcacctgagaaatcaaaaaaacgtaacaatggagt 42736827  T
Q  318 tttgaaaactcctatgcagttttgttcat 346  Q
    |||| ||||||| |||| ||| |||||||    
T  42736828 tttggaaactccgatgctgttctgttcat 42736856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 2205916 - 2205767
Alignment:
Q  21 aattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaacct 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  2205916 aattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaacct 2205817  T
Q  121 aaactatcataacatcataaaatccataaacctctataatcacaatttaa 170  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2205816 aaactatcataacatcataaaatcaataaacctctataatcgcaatttaa 2205767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 15900089 - 15900013
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaac 95  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||  |||||||||||||    
T  15900089 acaattcatctaatcctaaaaattctaccataatttcctaacaattctacaattttaacaatccaaacaattctaac 15900013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 15899959 - 15899871
Alignment:
Q  84 aacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaa--cctctataatcacaatttaac 171  Q
    ||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||||   ||||||||||||||||||||    
T  15899959 aacaattataacctaaact-aacaattctaacaacctaaattatcataacatcataaaatcaataaatctctctataatcacaatttaac 15899871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 4231088 - 4231187
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| ||||| |||||| |||   || ||| ||||||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||    
T  4231088 tcaatcacaaaacagcaatgcaataggatgataacaacttacttgatttt-gtgcttgaaattggcttggaatgacttatgcttggtgaaaatcgcacct 4231186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 1641117 - 1641042
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggct 266  Q
    |||||||||||| | ||| |||||| ||||||||| || ||||||||||| ||| ||||||||||||||||||||||    
T  1641117 tcaatcacaaaaaaccaatgcaatatgattcaaaacacttacttgatttt-gtgattgaaattggcttggaatggct 1641042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 36392362 - 36392224
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| ||||| |||||| |||||| |||||||| ||||||||||||||||||| |||    ||  | ||| ||||||||| |      
T  36392362 cacaaaacaacaatgcaataggattctaaaaacttacttg-tttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgcacctaggag 36392264  T
Q  295 agcaaaaaa-cgtaacaatggagttttgaaaactcctatg 333  Q
    | ||||||| |||||||||||||||||| |||||||||||    
T  36392263 atcaaaaaatcgtaacaatggagttttggaaactcctatg 36392224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 15309812 - 15309879
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| ||||||||||| ||||||| |||||| |||||||| |||||||||||||||||||    
T  15309812 cacaaaacaacaatgcaataagattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 15309879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 10524182 - 10524235
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  10524182 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 10524235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 21185861 - 21185792
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    ||||||||| ||| |||||| |||||||||||| || ||| |||||||| |||||||||||||| ||||||    
T  21185861 cacaaaataacaatgcaataggattcaaaaaacttatttg-tttttgtgattgaaattggcttgaaatggc 21185792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 28113019 - 28112882
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||| |||||||| |||    ||  | ||| ||||||||| |      
T  28113019 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggtttggaatgacttgaaattgctcaaaatcgcacctaggag 28112921  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |  |||||| |||||||| |||||||| |||||||||||    
T  28112920 aataaaaaatgtaacaatagagttttggaaactcctatg 28112882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 34142509 - 34142566
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||| ||||| |||||| |||||||| |||||||||||||||||||||||    
T  34142509 gcaataggattcagaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 34142566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 48272308 - 48272361
Alignment:
Q  211 aataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||| |||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  48272308 aataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 48272361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 48314899 - 48314830
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  48314899 cacaaaacaacaatgcaatatgattcaaaaaacttacttg-tttttgtgattgaaatttgcttggaatggc 48314830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 46860737 - 46860671
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaat 262  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| ||||||||||||| ||||    
T  46860737 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttagaat 46860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 17840741 - 17840794
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||| ||||||||    
T  17840741 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggattggaatg 17840794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 40590400 - 40590457
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||| ||||||| |||||| |||||| | |||||||||||||||||||||||    
T  40590400 gcaataggattaaaaaaacttacttg-tttttgcgattgaaattggcttggaatggctt 40590457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 45257881 - 45257934
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  45257881 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgaaatg 45257934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 20566273 - 20566318
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  20566273 aaaaacgcaacaatggagttttggaaactcctatgaagttctgttc 20566318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 45257970 - 45258015
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||||    
T  45257970 aaaaacgcaacaatgaagttttggaaactcctatgctgttttgttc 45258015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 45361759 - 45361723
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  45361759 caaaaaatgtaacaatggagttttggaaactcctatg 45361723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 5421881 - 5422212
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  5421881 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattttaacctaaacctaacaattcaaagaac 5421980  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
     ||||||||||||||||||||||||| ||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||  ||    
T  5421981 ataaactatcataacatcataaaatcaataaacctctagaatcacaatttaaccaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaatagaat 5422080  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5422081 tcaaaaaacttacttgatttt-gtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 5422179  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    |||||||||||||||  ||||||||||| ||||    
T  5422180 ttgaaaactcctatgttgttttgttcatatcac 5422212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 37311373 - 37311049
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  37311373 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 37311274  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  37311273 cttaactatcataacatcataaaatcaataaacctctataatcacaatttaac--caaaaaaactaacaaatcaatcacaaaatagcaatgcaataggat 37311176  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  37311175 tcagaaaacttacttga-ttttgtgcttgaaattggcttggattggcttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggattt 37311077  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||  ||| |||||||    
T  37311076 ttggaaactcctatgttgttctgttcat 37311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 23719759 - 23719432
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  23719759 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 23719660  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaattt-aacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataaga 217  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | |          ||| |||| ||||||||||||||||| |||||| ||    
T  23719659 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttcaccaaaaaaaaaactaacaaaccaatcacaaaatagcaatgcaatagga 23719560  T
Q  218 ttcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagt 317  Q
     ||||||||| ||||| | ||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  23719559 ctcaaaaaacttactt-aattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaagcaaaaaacgtaacaatggagt 23719461  T
Q  318 tttgaaaactcctatgcagttttgttcat 346  Q
    |||| |||||||||||  ||| |||||||    
T  23719460 tttggaaactcctatgttgttatgttcat 23719432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 24107431 - 24107104
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24107431 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 24107332  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaattt-aacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataaga 217  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | |          ||| |||| ||||||||||||||||| |||||| ||    
T  24107331 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttcaccaaaaaaaaaactaacaaaccaatcacaaaatagcaatgcaatagga 24107232  T
Q  218 ttcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagt 317  Q
     ||||||||| ||||| | ||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24107231 ctcaaaaaacttactt-aattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaagcaaaaaacgtaacaatggagt 24107133  T
Q  318 tttgaaaactcctatgcagttttgttcat 346  Q
    |||| |||||||||||  ||| |||||||    
T  24107132 tttggaaactcctatgttgttatgttcat 24107104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 17537567 - 17537275
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  17537567 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattataacaatctaaacaattctaacctaaacctaacaattcaaacaac 17537468  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||          ||| ||||||||||||||||| |||| |||||| |||    
T  17537467 ctaaactatcaaaacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaaactaacaaatcaatcacaaaattgcaatgcaataggat 17537368  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 312  Q
    ||| ||||| ||||||| |||||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||    
T  17537367 tcacaaaacttacttga-ttttgtgcttgaaattagcttggaatgacttatgctctgtgaaattcgcacctatggaagcaaaaaacgtaacaat 17537275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 34520376 - 34520052
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34520376 acaattcatctaatcctaaaaattctaccataatttcataataattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 34520277  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||  |||||||| ||||||| | ||||||            || |||||||||||||||||||||| |||||| |||    
T  34520276 ctaaactatcataacatcataaaataaataaacctatataatcgcgatttaa--tcaaaaaaattaacaaatcaatcacaaaatagcaatgcaataggat 34520179  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||  || ||  |||||  |||||||  | || | ||||||||||||||||| ||    
T  34520178 tcaaaaaacttacttga-ttttgtgcttgaaattagcttggaatggctgctgtttgctgaaaaacgcacctgagaaatccaaaaacgtaacaatggattt 34520080  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||| ||| |||||||    
T  34520079 ttggaaactcctatgctgttctgttcat 34520052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 333
Target Start/End: Complemental strand, 10359210 - 10358896
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||    
T  10359210 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattataacataaacctaacaattcaaacaac 10359111  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac--nnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataag 216  Q
    |||||||||||||||||||||||||| |||||||| ||||| | |||||||||            ||| ||||||||||||||| |||||| |||||| |    
T  10359110 ctaaactatcataacatcataaaatcaataaacctatataa-cgcaatttaacaaaaaaaaaaaactaacaaatcaatcacaaattagcaatgcaatagg 10359012  T
Q  217 attcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggag 316  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||| | | ||  |||||  |||||||  | || | ||||||||||||||||||    
T  10359011 attcaaaaaacttacttga-ttttgtgtttgaaattggcttggaatggctgacgtttgctgaaaaacgcacctgagaaatccaaaaacgtaacaatggag 10358913  T
Q  317 ttttgaaaactcctatg 333  Q
    ||||| |||||||||||    
T  10358912 ttttggaaactcctatg 10358896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 6978380 - 6978532
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  6978380 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 6978479  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||| ||| |||||    
T  6978480 ctaaactttcataacatcaaaaaatcaataaatctctataatcgcaacttaac 6978532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 33405449 - 33405528
Alignment:
Q  93 aacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccat-aaacctctataatcacaatttaac 171  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  33405449 aacctaaacctaacaattctaacaacctaaactatcataacatcataaaatcaataaaacctctataatcgcaatttaac 33405528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 43493121 - 43493258
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||||| | |||| |||||||| |||||||||||||||||||||||    ||  | ||| ||||||||| |      
T  43493121 cacaaaacaacaatgcaataggattcaaaaaacttgcttg-tttttgtgattgaaattggcttggaatggcttgaaattgctcaaaatcgcacctaggag 43493219  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | ||||||| ||||||||||||||||  |||||||||||    
T  43493220 atcaaaaaatgtaacaatggagtttttgaaactcctatg 43493258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 23409341 - 23409475
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||||| ||||||   |||||| |||||||||||||||||||||||    ||  | ||| ||||||||| |||    
T  23409341 cacaaaacaacaatgcaataggattcaaaaaacttacttg---tttgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgcaccta-gga 23409436  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
        ||||||||||||||||||||||| |||||||||||    
T  23409437 gaataaaaacgtaacaatggagttttggaaactcctatg 23409475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 14181684 - 14181740
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggct 266  Q
    |||||| |||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  14181684 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggct 14181740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 333
Target Start/End: Complemental strand, 39798665 - 39798542
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaa 308  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| |||||||||   |   | ||| ||||| || ||  |   ||||||| ||    
T  39798665 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggcttaaaatgattcaaaatcgcaactttgatactcaaaaacgcaa 39798567  T
Q  309 caatggagttttgaaaactcctatg 333  Q
    |||||||||||||||||||||||||    
T  39798566 caatggagttttgaaaactcctatg 39798542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 333
Target Start/End: Original strand, 3943130 - 3943165
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||||||||||||||    
T  3943130 aaaaaacgtaacaatggagttttgaaaactcctatg 3943165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 22003252 - 22003309
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  22003252 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggctt 22003309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 33405318 - 33405360
Alignment:
Q  28 ctaatcataaaaattctaccataatttcataacaattctacaa 70  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  33405318 ctaatcctaaaaattctaccataatttcctaacaattctacaa 33405360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 45435146 - 45435191
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  45435146 aaaaacgcaacaatggagttttggaaactcctatgcagttctgttc 45435191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 35493178 - 35493245
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||    
T  35493178 cacaaaacaacaatgcaataggattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 35493245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 40675973 - 40675906
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| ||||||||||||  ||||| |||||||| |||||||||||||||||||    
T  40675973 cacaaaacaacaatgcaataggattcaaaaaactgacttg-tttttgtgattgaaattggcttggaatg 40675906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 29090799 - 29090745
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatgg 264  Q
    |||||| |||| ||||||| |||||| |||||||| ||||||||||||||||||||    
T  29090799 gcaataggattaaaaaaacttacttg-tttttgtggttgaaattggcttggaatgg 29090745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 2917893 - 2917840
Alignment:
Q  211 aataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||| ||||||||| |  |||||| ||||||||||||||||||||||||||||||    
T  2917893 aataggattcaaaacatttacttg-tttttgtgcttgaaattggcttggaatggc 2917840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 8268608 - 8268657
Alignment:
Q  217 attcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  8268608 attcaaaaaacttacttg-tttttgtgattgaaattggcttagaatggctt 8268657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 41497695 - 41497642
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| ||||| ||||||||| ||||||||||||| |||||    
T  41497695 gcaataggattcaaaaaacttactt-atttttgtgattgaaattggctttgaatg 41497642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 22003342 - 22003386
Alignment:
Q  300 aaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||| |||||| |||||||| |||||||||||||||| |||||    
T  22003342 aaaacgcaacaattgagttttggaaactcctatgcagttctgttc 22003386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 23786362 - 23786295
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||| | ||||| |||||| |||||||| |||||||||||||||||||    
T  23786362 cacaaaacaacaatgcaataggatttagaaaacttacttg-tttttgtgattgaaattggcttggaatg 23786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 34639166 - 34639221
Alignment:
Q  211 aataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||| ||| ||||||| |||||| |||||||  |||||||||||||||||||||||    
T  34639166 aataaaattaaaaaaacttacttg-tttttgttattgaaattggcttggaatggctt 34639221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 12398346 - 12398676
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  12398346 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 12398445  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||          ||||||||||||||||||||||||||| ||||| |||    
T  12398446 ctaaactatcataacatcataaaatcaataaacttctataatcacaatttaac-aaaaaaaaactatcaaatcaatcacaaaatagcaacacaataggat 12398544  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  12398545 tcaaaaaacttacttga-ttttgtgcttgaaattggctttgaatggcttatggtttgtaaatttcgcacctatggaagcaataaacgtaacaatggagtt 12398643  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    |||||||||||||||| ||||||||||| ||||    
T  12398644 ttgaaaactcctatgctgttttgttcatatcac 12398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 32133217 - 32133092
Alignment:
Q  82 taaacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnn 181  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || | ||||||||| |||||||||              
T  32133217 taaacaattctaacctaaacctaacaattctaacaacctaaactatcataacatcataaaatcaaaaatcttctataatcgcaatttaacaaaaaaaaac 32133118  T
Q  182 ctatcaaatcaatcacaaaatagcaa 207  Q
    ||| ||||||||||||||||||||||    
T  32133117 ctaacaaatcaatcacaaaatagcaa 32133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 209 - 333
Target Start/End: Complemental strand, 34801727 - 34801603
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaa 308  Q
    |||||| |||||||||||| |||||  ||| |||| |||||||||||||||||||||||    ||  | ||| ||||||||| |  |  |||||||||||    
T  34801727 gcaataggattcaaaaaacttactttttttgtgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgcacctaggagaataaaaaacgtaa 34801628  T
Q  309 caatggagttttgaaaactcctatg 333  Q
    |||||||||||||||||||||||||    
T  34801627 caatggagttttgaaaactcctatg 34801603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 32133317 - 32133257
Alignment:
Q  35 taaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaac 95  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32133317 taaaaattctatcttaatttcctaacaattctacaattctaacaatctaaacaattctaac 32133257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 14124556 - 14124692
Alignment:
Q  196 acaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga- 294  Q
    |||||| | ||| ||||||||||||| || || |||||| |||||||| |||||||||||||||||||||||    |   ||||| |||||||| ||||     
T  14124556 acaaaacaacaatgcaataagattcagaacacgtacttg-tttttgtgattgaaattggcttggaatggcttgaaatggctgaaaatcgcacct-tggag 14124653  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |  ||||||||||||||| |||||||| |||||||||||    
T  14124654 aataaaaaacgtaacaatagagttttggaaactcctatg 14124692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 35019813 - 35019746
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  35019813 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 35019746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 13616463 - 13616406
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||    
T  13616463 gcaataggatttaaaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 13616406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 17126853 - 17126946
Alignment:
Q  240 tgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |||||||  |||||||||| |||| |||||| || |||||| |||||||||   || | ||||||| ||| ||||||||||| |||||||||||    
T  17126853 tgtgcttagaattggcttgaaatgacttatgcttggtgaaaatcgcacctaataaatccaaaaacgcaacgatggagttttggaaactcctatg 17126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 32026183 - 32026127
Alignment:
Q  210 caataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||| |||||||||||| |||||| |||||||| |||||||||||||||||| ||||    
T  32026183 caataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatagctt 32026127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 32691318 - 32691273
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  32691318 aaaaacgcaacaatggagttttggaaactcctatgcagttctgttc 32691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 29076261 - 29076297
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29076261 caaaaaacgtaacaatggagttttggaaactcctatg 29076297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 29109794 - 29109830
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29109794 caaaaaacgtaacaatggagttttggaaactcctatg 29109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 29111234 - 29111270
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29111234 caaaaaacgtaacaatggagttttggaaactcctatg 29111270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 333
Target Start/End: Complemental strand, 30763539 - 30763416
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaa 308  Q
    |||||| ||||||||| || ||||||||||| ||||||| ||||||||||||||| |||| | || |||||| | |||| || | |  | |||| || ||    
T  30763539 gcaataggattcaaaacacttacttgatttt-gtgcttgtaattggcttggaatgacttaagcttggtgaaaattgcacataagaatcccaaaaccgcaa 30763441  T
Q  309 caatggagttttgaaaactcctatg 333  Q
    |||||||| || ||||| |||||||    
T  30763440 caatggagattcgaaaattcctatg 30763416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 13404469 - 13404536
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| || ||||||| ||||||||    
T  13404469 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgatttaaattggattggaatg 13404536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 29068203 - 29068239
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||  |||||||||||    
T  29068203 caaaaaacgtaacaatggagttttagaaactcctatg 29068239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 29083450 - 29083486
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||  |||||||||||    
T  29083450 caaaaaacgtaacaatggagttttagaaactcctatg 29083486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 22438182 - 22438511
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  22438182 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacataaacctaacaattcaaacaac 22438281  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||||| |||||||||| ||||| |||    
T  22438282 ctaaactatcataacatcataaaatcaataaacctctataatcacaatttaac-caaaaaaaactatcaaatcaatcac-aaatagcaacacaataggat 22438379  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22438380 tcaaaaaacttacttga-ttttgtgcttgaaattgtctttgaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 22438478  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| ||||| |||||| || |||||||| ||||    
T  22438479 ttggaaacttctatgctgtcttgttcatatcac 22438511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 36775121 - 36774796
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  36775121 acaattcatctaatcctaaacattctaccataatttcataacaattctacaattttaacaatataaacaattctaacctaaacctaacaattcaaacaac 36775022  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| ||||||  ||    
T  36775021 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac-caaaaaaaactaacaaatcaatcacaaaatagcaatgcaatagaat 36774923  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36774922 tcaaaaaacttacttga-ttttgtgcttgaaattcgcttggaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 36774824  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||| ||| |||||||    
T  36774823 ttggaaactcctatgctgttatgttcat 36774796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 2774570 - 2774861
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| |||| |||||||||||    
T  2774570 acaattcatctaattctaaaaattctaccataatttcataacaattctacaatc---------taaacaattctaacctaaacctaaccattcaaacaac 2774660  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||    
T  2774661 ttaaactatcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaac-ctatcaaatcaatcacaaaatagcaacgcaataggat 2774759  T
Q  219 tcaaaaaacct-acttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagt 317  Q
    |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  2774760 tcaaaaaaacttacttgatttt-gtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacagtagagt 2774858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 43887889 - 43887585
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||   |||||||||||||||||||        ||| | |||||||||||||  ||||| ||||||||||||||||    
T  43887889 acaattcatctaatcctaaaaattctagtgtaatttcataacaattcta--------acagtctaaacaattctaatataaacctaacaattcaaacaac 43887798  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||||||||||             |||    
T  43887797 ctaaactctcataacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaa-ctatcaaatcaatcacaaaat-------------gat 43887712  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43887711 tcaaaaaacttacttgatttt-gtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 43887613  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||| ||| |||||||    
T  43887612 ttggaaactcctatgctgttctgttcat 43887585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 2567730 - 2567579
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  2567730 acaattcatctaatcctgaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 2567631  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaa 170  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  2567630 ctaaactatcataacatcacaaaatcaataaacctctataatcgcaatttaa 2567579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 51026449 - 51026140
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||                  |||||||  ||||||||||||||||    
T  51026449 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattcta------------------acctaaatctaacaattcaaacaac 51026368  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaa-cnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataaga 217  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||||||| |          ||| |||||||||||||||||||||| |||||| ||    
T  51026367 ctaaactatcataacatcataaaatcaataaacctatataatcgcaatttaaccaaaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatagga 51026268  T
Q  218 ttcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagt 317  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| || ||| ||  |||||  |||||||  | || |  ||||||||||||||||||    
T  51026267 ttcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatgactgatgtttgctgaaaaacgcacctgagaaatccgaaaacgtaacaatggagt 51026169  T
Q  318 tttgaaaactcctatgcagttttgttcat 346  Q
    |||| |||||||||||  ||| |||||||    
T  51026168 tttggaaactcctatgttgttctgttcat 51026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 45941066 - 45941214
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  45941066 acaattcatctaatccaaaaaattataccataatttcataacaattatacaattctaacaatctaaacaattataacctaaacctaacaattcaaacaac 45941165  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatt 167  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  45941166 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatt 45941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 9718972 - 9719102
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | ||| | ||||||||||||||||| |||||||||||  ||||||||||||||||| |||| |||||| ||||||||||| |||| |    
T  9718972 tcaatcacaaaacaacaatgaaataagattcaaaaaacttacttgatttta-tgcttgaaattggcttgaaatgacttatgctttgtgaaatttgcacat 9719070  T
Q  290 atggaagcaaaaaacgtaacaatggagttttg 321  Q
    |||||||||||||||  || | ||||||||||    
T  9719071 atggaagcaaaaaacacaatattggagttttg 9719102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 17045423 - 17045336
Alignment:
Q  84 aacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||    
T  17045423 aacaattctaacctaaacctaacaattctaacaacctaaactaccataacatcataaaatcaataaacatctataatcgcaatttaac 17045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 14968950 - 14968877
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattct 92  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14968950 acaattcatctaatcctaaaaattctaccataatttcctaacaattctacaattctaacaatctaaacaattct 14968877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 10315630 - 10315709
Alignment:
Q  93 aacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccat-aaacctctataatcacaatttaac 171  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  10315630 aacctaaacctaacaattctaacaacctaaactatcataacatcataaaatccataaaacctctataatcgcaatttaac 10315709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 4910063 - 4909920
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | ||| ||||||||||   || ||| ||||||||||| |||||||||||| |||||||||| |||||| || |||||| ||||||||    
T  4910063 tcaatcacaaaacaacaatgcaataagatgataacaacttacttgatttt-gtgcttgaaattagcttggaatgacttatgcttggtgaaaatcgcacct 4909965  T
Q  290 atggaagcaaaaaacgtaacaatggagttttgaaaactcctatgc 334  Q
    | | |  ||||||||| |||||||| |||||| ||||| ||||||    
T  4909964 aagaattcaaaaaacgcaacaatggtgttttggaaacttctatgc 4909920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 33384041 - 33383904
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||    ||  | ||| ||||||||| |      
T  33384041 cacaaaacaacaatgcaataagattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgcacctaggag 33383943  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | |||||||| |||||||||||||||| |||||||||||    
T  33383942 atcaaaaaacataacaatggagttttggaaactcctatg 33383904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 49572738 - 49572874
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||||| ||| |||||| |||||||||||| |||||| |||||||| ||||||||||||||||||| ||||   ||  | ||| | ||||||| |      
T  49572738 cacaaaataacaatgcaatatgattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatgactta-aattgctcaaaattgcacctaagag 49572835  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | ||||||||||||||||||||||||| ||| |||||||    
T  49572836 atcaaaaaacgtaacaatggagttttggaaattcctatg 49572874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 316
Target Start/End: Complemental strand, 49422326 - 49422206
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||    ||  ||||| ||||||||| |      
T  49422326 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttgaaattgctgaaaatcgcacctaggag 49422228  T
Q  295 agcaaaaaacgtaacaatggag 316  Q
    | ||||||||| ||||||||||    
T  49422227 atcaaaaaacgcaacaatggag 49422206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 51426775 - 51426640
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| ||||| |||||| |||||||||||| |||||| |||||||| ||||||||||||||||||| |||    ||  | ||| ||||||||| | |    
T  51426775 cacaaaacagcaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcacctaggaa 51426677  T
Q  295 a--gcaaaaaacgtaacaatggagttttgaaaactcc 329  Q
    |    |||||||||||||||||||||||| |||||||    
T  51426676 aataaaaaaaacgtaacaatggagttttggaaactcc 51426640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 333
Target Start/End: Original strand, 56140541 - 56140664
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||    |   | ||| |||||||| |||| | |||||||||||    
T  56140541 gcaataggattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttgaaataactcaaaatcgcacct-tggagatcaaaaaacgta 56140638  T
Q  308 acaatggagttttgaaaactcctatg 333  Q
    |||||||||||||| |||||||||||    
T  56140639 acaatggagttttggaaactcctatg 56140664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 956027 - 955956
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  956027 cacaaaacaacaatgcaataggattcaaaaaacttactt-atttttgtgattgaaattggcttggaatggctt 955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 14968820 - 14968760
Alignment:
Q  84 aacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatc 144  Q
    ||||||| ||| |||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  14968820 aacaattataaactaaacataacaattctaacaacctaaattatcataacatcataaaatc 14968760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 344
Target Start/End: Complemental strand, 21015961 - 21015827
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||    |   | ||| |||||||| |||| |   ||||||| |    
T  21015961 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttcaaatgactcaaaatcgcacct-tggataatcaaaaacgca 21015864  T
Q  308 acaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||||||||| |||||||||||||||| |||||    
T  21015863 acaatggagttttggaaactcctatgcagttctgttc 21015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21171018 - 21171086
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattct-acaattctaacaatttaaac 86  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  || ||||||| |||||| |||||    
T  21171018 acaattcatctaatcctaaaaattctaccataatttcataacaaacctaacaattcaaacaatctaaac 21171086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 44558885 - 44558818
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||||| ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  44558885 cacaaaataacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 44558818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 9491123 - 9491258
Alignment:
Q  197 caaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-a 295  Q
    ||||||| ||| |||||| |||| ||||||| ||||| ||||||||| ||||||||| ||||||||| |||    |   | ||| |||||||| |||| |    
T  9491123 caaaataacaatgcaataggattaaaaaaacttactt-atttttgtgattgaaattgacttggaatgacttgaaatagcttaaaatcgcacct-tggaga 9491220  T
Q  296 gcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
     ||||||||||||||||||||||||| |||||||||||    
T  9491221 tcaaaaaacgtaacaatggagttttggaaactcctatg 9491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 21410374 - 21410231
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | ||| |||| | |  |||||| || ||||||||||| |||||||||||||| || |||| ||||||| ||  ||||| | ||||||    
T  21410374 tcaatcacaaaaaaccaatgcaacagggctcaaaacacttacttgatttt-gtgcttgaaattggtttcgaatagcttatgtttgctgaaaattgcacct 21410276  T
Q  290 atgga-agcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | | |   ||||||||| ||||||||||||||| |||||||||||    
T  21410275 aagaattccaaaaaacgcaacaatggagttttggaaactcctatg 21410231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 28083841 - 28083894
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  28083841 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 28083894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 49816104 - 49816058
Alignment:
Q  91 ctaacctaaacttaacaattcaaacaacctaaactatcataacatca 137  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  49816104 ctaacctaaacctaacaattctaacaacctaaactatcataaaatca 49816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 37959588 - 37959636
Alignment:
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  37959588 gattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 37959636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 47873587 - 47873628
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataac 60  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  47873587 acaattcatctaatcctaaaaattctaccataattccataac 47873628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 55799469 - 55799514
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  55799469 aaaaacgcaacaatggagttttggaaactcctatgcagttctgttc 55799514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 1044482 - 1044518
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1044482 caaaaaacgtaacaatggagttttggaaactcctatg 1044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 333
Target Start/End: Original strand, 24076739 - 24076835
Alignment:
Q  237 ttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||| ||| |||||||||||||||||||| | || |||||| ||  |||||||| ||  ||||  | ||||||||||||||| ||| |||||||    
T  24076739 ttttgtgtttgtaattggcttggaatggcttaagcttggtgaaaatcatacctatgggagtcaaaactgcaacaatggagttttggaaattcctatg 24076835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 34528401 - 34528330
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| |||||| ||||| || ||| |||||||| |||||||||||||||||||||||    
T  34528401 cacaaaacaacaatgcaataggattcagaaaacttatttg-tttttgtgattgaaattggcttggaatggctt 34528330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 40352468 - 40352424
Alignment:
Q  300 aaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||    
T  40352468 aaaacgcaacaatggagttttggaaactcctatgcagttctgttc 40352424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 4783879 - 4783811
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| ||||||||||||||||||   ||||| |||||||| |||||||| ||||||||||||||    
T  4783879 cacaaaacaacaatgcaataagattcaaaaaa---acttg-tttttgtgattgaaattagcttggaatggctt 4783811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 28083929 - 28083975
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  28083929 aaaaaacgcaacaatggagttttggaaactcctatgctgttatgttc 28083975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 40352550 - 40352501
Alignment:
Q  217 attcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  40352550 attcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggctt 40352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 8866968 - 8866864
Alignment:
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgga 315  Q
    ||||||||  || ||||||||||| ||| ||| |||||| |||||||| |||| | || | |||| ||||||||||||||   |||| || |||||||||    
T  8866968 gattcaaagcacttacttgatttt-gtgtttgtaattggtttggaatgacttaagcttggagaaaatcgcacctatggaactcaaaaccgcaacaatgga 8866870  T
Q  316 gttttg 321  Q
    ||||||    
T  8866869 gttttg 8866864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 41793497 - 41793452
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  41793497 aaaaacgcaacaatggagttttggaaactcctatgaagttctgttc 41793452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 17045484 - 17045440
Alignment:
Q  37 aaaattctaccataatttcataacaat-tctacaattctaacaat 80  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  17045484 aaaattctaccataatttcataacaatctaaacaattctaacaat 17045440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 39590404 - 39590475
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| | |||| ||||| |||||| |||||||| ||||||||| |||||||||||||    
T  39590404 cacaaaacaacaatgcaatagggttcagaaaacttacttg-tttttgtgattgaaattgacttggaatggctt 39590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 42322139 - 42321814
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  42322139 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatcttaacaattttaacctaaacctaacaattcaaacaac 42322040  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    || ||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||| ||| |||||| |||    
T  42322039 ct-aactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaactaacaaatcaatcacaaaataacaatgcaataggat 42321941  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| |||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42321940 tcaaaaaacttacttgattttt-tgctttaaattggcttgaaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 42321842  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||| ||| |||||||    
T  42321841 ttggaaactcctatgctgttctgttcat 42321814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 39 - 351
Target Start/End: Complemental strand, 11377637 - 11377327
Alignment:
Q  39 aattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcat 138  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11377637 aattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaacctaaactatcataacatcat 11377538  T
Q  139 aaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgattt 238  Q
    |||||  |||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||  ||||| |||||| || || ||||    
T  11377537 aaaattaataaacctctataatcgcaatttaaccaaaaaaaa-ctatcaaatcaatcacaaaatagcaacgcaattggattcgaaaaacttaattaattt 11377439  T
Q  239 ttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagtt 338  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||    
T  11377438 t-gtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctattgaagcaaaaaacgtaacaattgagttttggaaactcctatgctgtt 11377340  T
Q  339 ttgttcatctcac 351  Q
    |||||||| ||||    
T  11377339 ttgttcatatcac 11377327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 44929019 - 44929354
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaac--aatttaaacaattctaacctaaacttaacaattcaaaca 116  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||    |||||||||||||||||| ||||||||||||||    
T  44929019 acaattcatctaatcctaaaaattccaccataatttcataacaattctacaattctaacctaaacctaacaattctaacctaaacctaacaattcaaaca 44929118  T
Q  117 acctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnn--ctatcaaatcaatcacaaaatagcaacgcaata 214  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||||            ||||||||||||||||||||||||||| |||||    
T  44929119 acctaaactatcataacatcataaaaccaataaacctttataatcacaatttaaccaaaaaaaaaaactatcaaatcaatcacaaaatagcaacacaata 44929218  T
Q  215 agattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgg 314  Q
     |||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  44929219 ggattcaaaaaacttacttgatttt-gtgcttgaaattgacttggaatgacttatgctttgtgaaattcgcacctatggaagcaaaaaatgtaacaatgg 44929317  T
Q  315 agttttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||||||| |||||||||||| ||||||||||| ||||    
T  44929318 agttttggaaactcctatgctgttttgttcatatcac 44929354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 10052015 - 10051724
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  10052015 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 10051916  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  10051915 ctaaactatcagaacatcataaaatcaataaacctctataatcgcaatttaac-aaaaaaaaactaacaaatcaatcacaaaatagcaatgcaatatgat 10051817  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 312  Q
    ||||||| | ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  10051816 tcaaaaaccttacttga-ttttgtgcttgaaattggcttagaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacataacaat 10051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 51016842 - 51017170
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||    
T  51016842 acaattcatctaatcttaaaaattctaccataatttcataacaattctacaattaaaa-aatctaaacaattctaacctaaacctaacaattcaaacaac 51016940  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac---nnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataa 215  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||             ||| |||||||||||||||||| ||| ||||||     
T  51016941 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaaaaagactaacaaatcaatcacaaaatatcaatgcaatag 51017040  T
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgga 315  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51017041 gattcaaaaaacttacttga-ttttgtgctagaaattggtttggaatgacttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgga 51017139  T
Q  316 gttttgaaaactcctatgcagttttgttcat 346  Q
    |||||| |||||||||||  |||||||||||    
T  51017140 gttttggaaactcctatgttgttttgttcat 51017170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 34470725 - 34470434
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  34470725 acaattcatctaatcctaaaaattctaccataatttcataacaattttacaattataacaatctaaacaattctaacctaaacctaacaattcaaacaac 34470626  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  34470625 ctaaactatcataacatcataaaatcaataaacctctacaatcccaatttaac-caaaaaaaactaacaaatcaatcacaaaatagcaatgcaataggat 34470527  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 312  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  34470526 tcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggtttatgctttgtgaaattcgcacctatggaagcaaaatacgtaacaat 34470434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 74 - 320
Target Start/End: Complemental strand, 51011928 - 51011684
Alignment:
Q  74 taacaatttaaacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnn 173  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||      
T  51011928 taacaatctaaacaattctaacttaaacctaacaattcaaacaacctaaactatcataacatcataaattcaataaacctctataatcacaatttaacca 51011829  T
Q  174 nnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtt 273  Q
            |||||||||||||||||||||||||||||| || ||| |||||||  ||||||||||| ||||||||||||| ||| ||||| |||||||||    
T  51011828 aaaaaaa-ctatcaaatcaatcacaaaatagcaacgcagtaggatacaaaaaatttacttgatttt-gtgcttgaaattgacttcgaatgacttatggtt 51011731  T
Q  274 tgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtttt 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  51011730 tgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtttt 51011684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 50457910 - 50457582
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  50457910 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 50457811  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||| ||||||||||||||||||| ||||||||  |||||| ||||||||           ||| |||||||||||||||||||| | |||||| |||    
T  50457810 ctaaaccatcataacatcataaaatcaataaacctacataatcgcaatttaa-aaataaaaaactaacaaatcaatcacaaaatagcgatgcaataggat 50457712  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgt---gaaattcgcacctatggaagcaaaaaacgtaacaatgga 315  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || | | ||  |    |||  |||||||  | || | |||||||||||||||||    
T  50457711 tcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatgactgacgtttgctaaaaaaaaacgcacctgagaaatccaaaaacgtaacaatgga 50457613  T
Q  316 gttttgaaaactcctatgcagttttgttcat 346  Q
    |||||| |||||||||||| ||| |||||||    
T  50457612 gttttggaaactcctatgctgttctgttcat 50457582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 49274967 - 49275239
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||                  |||||||| ||||||||||||||||    
T  49274967 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattcta------------------acctaaacctaacaattcaaacaac 49275048  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||| ||||||||||| |||||| |||    
T  49275049 ctaaactatcagaacatcataaaatcaataaacctctataatcgcaatttaacaaaaaaaa--ctaacaaatcaatcgcaaaatagcaatgcaataggat 49275146  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 312  Q
    | ||||||| ||||| ||||| |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  49275147 taaaaaaacttacttaatttt-gtgcttgaaattggcttgaaatgacttatgctttgtgaaattcgcacctatggaagcaaaaaacgtaacaat 49275239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 47759620 - 47759469
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||    
T  47759620 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattttaacaatctaaacaattctaacctaatcctaacaattcaaacaac 47759521  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaa 170  Q
    |||||||||||||||||||||||||| ||||||||||  |||| ||||||||    
T  47759520 ctaaactatcataacatcataaaatcaataaacctctgcaatcgcaatttaa 47759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 46412946 - 46412794
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  46412946 acaattcatctaatcataaaaattctgccatgatttcataacaattatacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 46412847  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    ||||||||||| |||||||||||||  |||||| ||||||||| |||||||||    
T  46412846 ctaaactatcagaacatcataaaattaataaacttctataatcgcaatttaac 46412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 30194090 - 30194241
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  30194090 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 30194189  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaa 170  Q
    ||||| ||||||| ||||||||| || |||||| | ||||||| ||||||||    
T  30194190 ctaaattatcatagcatcataaactcaataaacttgtataatcgcaatttaa 30194241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 14633026 - 14633136
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14633026 acaattcatctaatcttaaaaattctaccataatttcataacaa--------ttctaacaatgtaaacaattctaacctaaacctaacaattcaaacaac 14633117  T
Q  119 ctaaactatcataacatca 137  Q
    |||||||||||||| ||||    
T  14633118 ctaaactatcataaaatca 14633136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 327
Target Start/End: Complemental strand, 27096303 - 27096093
Alignment:
Q  116 aacctaaactatcataacatcataaaatccataaacc-tctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaata 214  Q
    ||||||||||||||||| ||||||||||| ||||| | |||||||||  ||||||||          ||| ||| |||||||||| | ||||| ||||||    
T  27096303 aacctaaactatcataaaatcataaaatcaataaaacatctataatcgaaatttaaccaaaaacaa-ctaacaattcaatcacaacacagcaatgcaata 27096205  T
Q  215 agattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatgg 314  Q
     ||||||||| || |||||||||||| | |||  |||||||||||||||||||| | || |||||| ||||||||| | |    ||||||| ||||||||    
T  27096204 ggattcaaaacacttacttgattttt-tccttagaattggcttggaatggcttaagcttggtgaaaatcgcacctaggaatatcaaaaacgcaacaatgg 27096106  T
Q  315 agttttgaaaact 327  Q
    ||||||| |||||    
T  27096105 agttttggaaact 27096093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 45099046 - 45098905
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||| ||||||| | ||| |||||| |||||||||||| |||||| |||||||| || |||||| |||||||||||||    ||  ||||| |||||| |    
T  45099046 tcaaccacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattaaaattgacttggaatggcttgaaattgctgaaaatcgcacat 45098948  T
Q  290 atggaagcaaaaaacgtaacaatggagttttgaaaactcctat 332  Q
    | |  | ||||||||||||||||||||||||| ||||||||||    
T  45098947 aggagatcaaaaaacgtaacaatggagttttggaaactcctat 45098905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 20374453 - 20374378
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggct 266  Q
    ||||||| |||| | ||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  20374453 tcaatcataaaacaacaatgcaataggattcaaaaaacttacttgatttt-gtgcttgaaattggcttggaatggct 20374378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 43571520 - 43571659
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatg-g 293  Q
    ||||||| | ||| |||||| |||||||||||| |||||| ||| |||| ||||||||| |||||||||||||    ||  | ||| ||||||||| | |    
T  43571520 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttctgtgattgaaattgacttggaatggcttcaaattgctcaaaatcgcacctaggag 43571618  T
Q  294 aagcaaaa-aacgtaacaatggagttttgaaaactcctatg 333  Q
    ||  |||| ||||||||||||||||||||||||||||||||    
T  43571619 aataaaaaaaacgtaacaatggagttttgaaaactcctatg 43571659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 44490582 - 44490515
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  44490582 cacaaaacaacaatgcaataagattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 44490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 27188725 - 27188802
Alignment:
Q  93 aacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccat-aaacctctataatcacaatttaa 170  Q
    ||||||||| ||||||||| |||||| |||||||||||||||| | |||||| || |||||||||||||| ||||||||    
T  27188725 aacctaaacctaacaattctaacaacttaaactatcataacat-acaaaatcaataaaacctctataatcgcaatttaa 27188802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 333
Target Start/End: Original strand, 43478692 - 43478803
Alignment:
Q  221 aaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgtaacaatggagttt 319  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||    |   | ||| |||||||| |||| | |||||||||||||||||||||||    
T  43478692 aaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgcacct-tggagatcaaaaaacgtaacaatggagttt 43478789  T
Q  320 tgaaaactcctatg 333  Q
    || |||||||||||    
T  43478790 tggaaactcctatg 43478803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 46345163 - 46345095
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatgg 264  Q
    ||||||| | ||| ||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||    
T  46345163 cacaaaacaacaatgcaataagattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatgg 46345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 51011966 - 51011922
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaat 63  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  51011966 acaattcatctaatcctaaaaattgtaccataatttcataacaat 51011922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 55267652 - 55267585
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  55267652 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 55267585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 2267278 - 2267225
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  2267278 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 2267225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 36136449 - 36136502
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  36136449 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 36136502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 50998505 - 50998558
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  50998505 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 50998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 2645589 - 2645544
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  2645589 aaaaacgcaacaatggagttttggaaactcctatgcagttctgttc 2645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 52568000 - 52567928
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||| ||||||| | ||| |||||| |||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  52568000 tcaaccacaaaacaacaatgcaatatgattcaaaaaacttacttg-tttttgtgattgaaattgacttggaatg 52567928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 333
Target Start/End: Complemental strand, 13894449 - 13894326
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaa 308  Q
    |||||| |||| |||||||||||||| |||| ||| ||||||||||||||||||| |||    |   | ||| ||||||||  |  | |||||||| |||    
T  13894449 gcaataggattaaaaaaacctacttg-ttttggtgattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttcgagatcaaaaaacataa 13894351  T
Q  309 caatggagttttgaaaactcctatg 333  Q
    ||||||||||||| |||||||||||    
T  13894350 caatggagttttggaaactcctatg 13894326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 24700958 - 24700891
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| ||||||||||||||||||| |||||| ||||| || ||||| |||||||||||||    
T  24700958 cacaaaacaacaatgcaataagattcaaaaaacttacttg-tttttttgattgaatttggcttggaatg 24700891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 49217226 - 49217190
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49217226 caaaaaacgtaacaatggagttttggaaactcctatg 49217190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 55205504 - 55205437
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| || ||||||||||||||||    
T  55205504 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattaaaattggcttggaatg 55205437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 2430114 - 2430180
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaat 262  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||| |||||||||    
T  2430114 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattagcttggaat 2430180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 18441954 - 18442096
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | ||| |||||| ||||||||| || ||||||| || |||||||  ||||||||||||||| |||  |  | |||||| ||||||||    
T  18441954 tcaatcacaaaacaacaatgcaatatgattcaaaacacttacttga-ttatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacct 18442052  T
Q  290 atggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | | |    ||||||| ||||||| ||||||  |||||||||||    
T  18442053 aggaatatcaaaaacgcaacaatgcagttttagaaactcctatg 18442096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 19487028 - 19487170
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | ||| |||||| ||||||||| || ||||||| || |||||||  ||||||||||||||| |||  |  | |||||| ||||||||    
T  19487028 tcaatcacaaaacaacaatgcaatatgattcaaaacacttacttga-ttatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacct 19487126  T
Q  290 atggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    | | |    ||||||| ||||||| ||||||  |||||||||||    
T  19487127 aggaatatcaaaaacgcaacaatgcagttttagaaactcctatg 19487170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 34645776 - 34645726
Alignment:
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||||||||| |||||| |||||||| | |||||||||||||||||||||    
T  34645776 gattcaaaaaacttacttg-tttttgtgatcgaaattggcttggaatggctt 34645726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 51694013 - 51693978
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |||||| |||||||||||||||||||||||||||||    
T  51694013 aaaaaatgtaacaatggagttttgaaaactcctatg 51693978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 3493807 - 3493750
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||  ||||||||    
T  3493807 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttctaatggctt 3493750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 3497501 - 3497444
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||  ||||||||    
T  3497501 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttctaatggctt 3497444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 27188582 - 27188624
Alignment:
Q  28 ctaatcataaaaattctaccataatttcataacaattctacaa 70  Q
    |||||| ||||||||||||||||||||  ||||||||||||||    
T  27188582 ctaatcctaaaaattctaccataattttctaacaattctacaa 27188624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 2267189 - 2267144
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  2267189 aaaaacgcaacaatggagttttggaaactcctatgctgttctgttc 2267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 2950499 - 2950454
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  2950499 aaaaacgcaacaatggagttttggaaactcctatgaagttatgttc 2950454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 3493714 - 3493677
Alignment:
Q  307 aacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  3493714 aacaatggagttttgaaaactcttatgcagttatgttc 3493677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 3497408 - 3497371
Alignment:
Q  307 aacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  3497408 aacaatggagttttgaaaactcttatgcagttatgttc 3497371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 4002847 - 4002802
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  4002847 aaaaacgcaacaatggagttttggaaactcctatgctgttctgttc 4002802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 41579584 - 41579640
Alignment:
Q  209 gcaataagattcaaaaaacct-acttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||||    
T  41579584 gcaataggattcaaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 41579640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 46406531 - 46406576
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  46406531 aaaaacgcaacaatggagttttggaaactcctatgaagttctgttc 46406576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 7247707 - 7247774
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||||| ||||| |||||| || ||||||||| |||||||||    
T  7247707 cacaaaacaacaatgcaataggattcaaaaaacttactt-atttttttgattgaaattgacttggaatg 7247774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 8397787 - 8397736
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaa 261  Q
    |||||| ||||||||| || ||||||||||| ||||||| |||||||||||||    
T  8397787 gcaataggattcaaaacacttacttgatttt-gtgcttgtaattggcttggaa 8397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 16484393 - 16484429
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||  |||||||||||    
T  16484393 caaaaaacgtaacaatggagtttttgaaactcctatg 16484429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 346
Target Start/End: Complemental strand, 36349039 - 36348716
Alignment:
Q  21 aattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaacct 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||    
T  36349039 aattcatctaatcctaaaaattctaccataatttcataacaattatacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaatct 36348940  T
Q  121 aaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagattc 220  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||          ||| |||||||||||||||||||||| ||||||  ||||    
T  36348939 aaactatcataacatcataaaatcaataaacctctataattgcaatttaac-caaacaaaactaacaaatcaatcacaaaatagcaatgcaatagaattc 36348841  T
Q  221 aaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtttt 320  Q
    ||||||| ||||||| |||||||||||||||||||||||||||  ||||| |||||||||||| || |||||||||||||||||||||||||||||||||    
T  36348840 aaaaaacttacttga-ttttgtgcttgaaattggcttggaatgatttatgctttgtgaaattcacatctatggaagcaaaaaacgtaacaatggagtttt 36348742  T
Q  321 gaaaactcctatgcagttttgttcat 346  Q
    | |||||||||||| ||| |||||||    
T  36348741 ggaaactcctatgctgttctgttcat 36348716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 1696286 - 1696611
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||||| ||||||||||||||||    
T  1696286 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacattctaatcaattttaacctaaacctaacaattcaaacaac 1696385  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
     ||||||||||||||||||||||||| ||| |||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  1696386 ataaactatcataacatcataaaatcaatatacctctataatcgcaatttaac-caaaaaaaactaacaaatcaatcacaaaatagcaatgcaataggat 1696484  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| || |||| ||||||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||    
T  1696485 tcaaaaaacttaattga-ttttgtgcttgaaattgacttggaatggcttattcttcgtgaaattcgcacctatggaagcaaaaaacgtaacaaaggagtt 1696583  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| |||||||||||| ||| |||||||    
T  1696584 ttggaaactcctatgctgttatgttcat 1696611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 84 - 351
Target Start/End: Complemental strand, 41088480 - 41088215
Alignment:
Q  84 aacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnct 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||    
T  41088480 aacaattctaacctaaacctaacaattcaaacaacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaac-ct 41088382  T
Q  184 atcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattc 283  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  41088381 atcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgatttt-gtgcttgaaattggcttagaatggcttatggtttgtgaaattc 41088283  T
Q  284 gcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||    
T  41088282 gcacctatggaagcaaaaaacgtaacaatggagttttggtaactcctatgctgttttgttcatatcac 41088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 19 - 351
Target Start/End: Complemental strand, 7484151 - 7483839
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||                  |||||||| ||||||||||||||||    
T  7484151 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattcta------------------acctaaacctaacaattcaaacaac 7484070  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||          | ||||||||||||||||||||||||||||||| |||    
T  7484069 ctaaactatcataacatcataaaatcaataaacttctataatcacaatttaaccaaaaaaaacc-atcaaatcaatcacaaaatagcaacgcaataggat 7483971  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    | ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7483970 taaaaaaacttacttgatttt-gtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 7483872  T
Q  319 ttgaaaactcctatgcagttttgttcatctcac 351  Q
    ||| |||||||||||| ||||||||||| ||||    
T  7483871 ttggaaactcctatgctgttttgttcatatcac 7483839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 40936984 - 40937283
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  40936984 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacataacaattcaaacaac 40937083  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  40937084 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac-caaaaaaaactaacaaatcaatcacaaaatagcaatgcaataggat 40937182  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||| ||||||| ||||||||||||||||||||||||  | |||||| ||||||||||||         |||| |||||||||||||||||||||    
T  40937183 tcaaaaaacttacttga-ttttgtgcttgaaattggcttggatagacttatgctttgtgaaattc---------gaagtaaaaaacgtaacaatggagtt 40937272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 1972929 - 1973245
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        |||||||||| ||||||||| |||| ||||| ||||||||||||||||    
T  1972929 acaattcatctaatcctaaaaattctaccataatttcataacaa--------ttctaacaatctaaacaattttaacataaacctaacaattcaaacaac 1973020  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    | |||||||||||| ||||||||||| |||||||| ||||||||||| |||||          ||| |||||||||||||||||||||| || ||| |||    
T  1973021 ccaaactatcataatatcataaaatcaataaacctatataatcacaa-ttaac-caaaaaaaactaacaaatcaatcacaaaatagcaatgccataggat 1973118  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 318  Q
    ||||||||  ||||||| |||||||||||||||| ||||||||||||  ||| ||  |||||  |||||||  | || | ||||||||||||||||||||    
T  1973119 tcaaaaaatttacttga-ttttgtgcttgaaattagcttggaatggccgatgtttgctgaaaaacgcacctgagaaatccaaaaacgtaacaatggagtt 1973217  T
Q  319 ttgaaaactcctatgcagttttgttcat 346  Q
    ||| ||||||||| || ||| |||||||    
T  1973218 ttggaaactcctacgctgttctgttcat 1973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 312
Target Start/End: Complemental strand, 6792045 - 6791842
Alignment:
Q  107 aattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagca 206  Q
    |||||||||||| |||||||||  |||||||||||||| |||||||||||||||| |||||||||          ||| ||||| |||||||||||||||    
T  6792045 aattcaaacaacataaactatcggaacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaa-ctaacaaattaatcacaaaatagca 6791947  T
Q  207 acgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgt 306  Q
    | |||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||| ||| ||||||||||||||||| |||||||||||||    
T  6791946 atgcaataggattcaaaaaacttacttgatttt-gtgcttgaaattggcttagaatgacttatgctttatgaaattcgcacctatgaaagcaaaaaacgt 6791848  T
Q  307 aacaat 312  Q
    ||||||    
T  6791847 aacaat 6791842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 4722669 - 4722518
Alignment:
Q  89 ttctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaa 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||          |||||||    
T  4722669 ttctaacctaaacctaacaattcaaacaacctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaaccaaaaaaaaactatcaa 4722570  T
Q  189 atcaatcacaaaatagcaacgcaataagattc-aaaaaacctacttgatttt 239  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  4722569 atcaatcacaaaatagcaacgcaataggattcaaaaaaacttacttgatttt 4722518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 11357266 - 11357187
Alignment:
Q  92 taacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  11357266 taacctaaacctaacaattcaaacaacataaactataataacatcataaaatcaataaatctctataatcgcaatttaac 11357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 11356974 - 11357053
Alignment:
Q  92 taacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaac 171  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||  |||||||||    
T  11356974 taacctaaacctaacaattcaaacaacataaactataataacatcataaaatcaataaatctctataattgcaatttaac 11357053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 25499713 - 25499861
Alignment:
Q  184 atcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattc 283  Q
    ||||| |||| ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||| |||| |||    ||  | ||| ||    
T  25499713 atcaattcaaccacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatgacttgaaattgctcaaaatc 25499811  T
Q  284 gcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||| |  | ||||||| ||||||||||||||||| |||||||||||    
T  25499812 gcacctaggagatcaaaaaatgtaacaatggagttttggaaactcctatg 25499861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 4722762 - 4722714
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattcta 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4722762 acaattcatctaatcctaaaaattctaccataatttcataacaattcta 4722714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 41088519 - 41088471
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattcta 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41088519 acaattcatctaatcctaaaaattctaccataatttcataacaattcta 41088471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 344
Target Start/End: Complemental strand, 27660162 - 27660028
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||    |   | ||| |||||||| |||| |   ||||||| |    
T  27660162 gcaataagattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcacct-tggataattaaaaacgca 27660065  T
Q  308 acaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||||||||| |||||||||||||||| |||||    
T  27660064 acaatggagttttggaaactcctatgcagttctgttc 27660028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 6018 - 5961
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  6018 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 5961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 8574943 - 8574886
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  8574943 gcaataagattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggctt 8574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 18309894 - 18309963
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  18309894 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 18309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 20199994 - 20200063
Alignment:
Q  193 atcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||||| | ||| ||||||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  20199994 atcacaaaacaacaatgcaataagattcaaaaaatttacttg-tttttgtgattgaaattggcttggaatg 20200063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 6792105 - 6792057
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattcta 67  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  6792105 acaattcatctaatcctaaaaattccaccatcatttcataacaattcta 6792057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 8539481 - 8539527
Alignment:
Q  298 aaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||    
T  8539481 aaaaaacgcaacaatggagttttggaaactcctatgctgttttgttc 8539527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 38855562 - 38855619
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  38855562 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggctt 38855619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 541160 - 541093
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||| ||||| |||||| |||||||| |||||||||||||||||||    
T  541160 cacaaaacaacaatgcaataggattcagaaaacttacttg-tttttgtgattgaaattggcttggaatg 541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 3603009 - 3603064
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||||| |||||||| ||| |||||| |||||||| |||||||||||||||||||||    
T  3603009 gcaatatgattcaaagaacttacttg-tttttgtgattgaaattggcttggaatggc 3603064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 30887315 - 30887351
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  30887315 caaaaaacgtaacaatggagttttggaaactcctatg 30887351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 41798954 - 41798918
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    ||||||||||||||||||||||||| |||||||||||    
T  41798954 caaaaaacgtaacaatggagttttggaaactcctatg 41798918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 11028855 - 11028913
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctta 268  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| |||| ||||    
T  11028855 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatgactta 11028913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 268
Target Start/End: Original strand, 23190720 - 23190751
Alignment:
Q  237 ttttgtgcttgaaattggcttggaatggctta 268  Q
    ||||||||||||||||||||||||||||||||    
T  23190720 ttttgtgcttgaaattggcttggaatggctta 23190751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 8574853 - 8574815
Alignment:
Q  300 aaaacgtaacaatggagttttgaaaactcctatgcagtt 338  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  8574853 aaaacgcaacaatggagttttggaaactcctatgcagtt 8574815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 11348441 - 11348486
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  11348441 aaaaacgcaacaatggagttttggaaactcctatgctgttctgttc 11348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 19035371 - 19035326
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  19035371 aaaaacgcaacaatggagttttggaaactcctatgaagttctgttc 19035326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 1398739 - 1398703
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |||||||  ||||||||||||||||||||||||||||    
T  1398739 caaaaaatataacaatggagttttgaaaactcctatg 1398703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 41201964 - 41201893
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| |||| ||||||| ||||| ||||||||| |||||||||||||  ||||||||    
T  41201964 cacaaaacaacaatgcaataggatttaaaaaacttactt-atttttgtgattgaaattggcttaaaatggctt 41201893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 6e-99; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 19 - 292
Target Start/End: Original strand, 26488007 - 26488281
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  26488007 acaattcatctaatcctaaaaattctaccataatttcataacaattatacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 26488106  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaac--nnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataag 216  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||| |    
T  26488107 ctaaactatcgtaacatcataaaatcaataaacctctataatcacaatttaaccaaaaaaaaaaactatcaaatcaatcacaaaatagcaacgcaatagg 26488206  T
Q  217 attcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatg 292  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  26488207 attcaaaaaacttacttga-ttttgtgcttgaaattagcttggaatgacttatggtttgtgaatttcgcacctatg 26488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 19241389 - 19241143
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  19241389 acaattcatccaatcctaaaaattctaccataatttcataacaattctacaattctaagtatctaaacaattctaacctaaacctaacaattcaaacaac 19241290  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  19241289 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac-ctaaaaaaactaacaaatcaatcacaaaatagcaatgcaatatgat 19241191  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  19241190 tcaaaaaacttacttga-ttttgtgtttgaaattggcttggaatggctt 19241143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 19314573 - 19314327
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  19314573 acaattcatccaatcctaaaaattctaccataatttcataacaattctacaattctaagtatctaaacaattctaacctaaacctaacaattcaaacaac 19314474  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnctatcaaatcaatcacaaaatagcaacgcaataagat 218  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||||||| |||||| |||    
T  19314473 ctaaactatcataacatcataaaatcaataaacctctataatcgcaatttaac-ctaaaaaaactaacaaatcaatcacaaaatagcaatgcaatatgat 19314375  T
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  19314374 tcaaaaaacttacttga-ttttgtgtttgaaattggcttggaatggctt 19314327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 182 - 351
Target Start/End: Original strand, 26488290 - 26488458
Alignment:
Q  182 ctatcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaat 281  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| |    
T  26488290 ctatcaaatcaatcacaaaatagcaacgcaataggattcaaaaaacttacttgatttt-gtgcttgaaattagcttggaatggcttatggtttgtgaatt 26488388  T
Q  282 tcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttcatctcac 351  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||    
T  26488389 tcgcacctatggaagcaaaaaacgtaacaatggagttttggaaactcctatgctgtttggttcatatcac 26488458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 42167622 - 42167471
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattctacaattctaacaatttaaacaattctaacctaaacttaacaattcaaacaac 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  42167622 acaattcatctaatcctaaaaattctaccataatttcataacaattctacaattctaacaatctaaacaattctaacctaaacctaacaattcaaacaac 42167523  T
Q  119 ctaaactatcataacatcataaaatccataaacctctataatcacaatttaa 170  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  42167522 ctaaactatcataacatcaaaaaatcaataaacctctataatcgcaatttaa 42167471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 84 - 346
Target Start/End: Complemental strand, 38032556 - 38032297
Alignment:
Q  84 aacaattctaacctaaacttaacaattcaaacaacctaaactatcataacatcataaaatccataaacctctataatcacaatttaacnnnnnnnnnnct 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||          ||    
T  38032556 aacaattctaacctaaacctaacaattcaaacaacctaaactatcataacatcataaaatcaataaacctatataatcgcaatttaac--caaaaaaact 38032459  T
Q  184 atcaaatcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattc 283  Q
    | ||||| |||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||  |||||  |    
T  38032458 aacaaataaatcacaaaatagcaatgcaataggattcaaaaaacttacttga-ttttgtgcttgaaattggcttggaatggctgatgtttgctgaaaaac 38032360  T
Q  284 gcacctatggaagcaaaaaacgtaacaatggagttttgaaaactcctatgcagttttgttcat 346  Q
    |||| |  | || | |||||| ||||||| |||||||| |||||||||||| ||| |||||||    
T  38032359 gcacatgagaaatccaaaaacataacaattgagttttggaaactcctatgctgttatgttcat 38032297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 38032595 - 38032547
Alignment:
Q  19 acaattcatctaatcataaaaattctaccataatttcataacaattcta 67  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  38032595 acaattcatctaatcctaaacattctaccataatttcataacaattcta 38032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 38872778 - 38872847
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    ||||||| | ||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  38872778 cacaaaacaacaatgcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 38872847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 333
Target Start/End: Original strand, 41276736 - 41276859
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga-agcaaaaaacgta 307  Q
    |||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||    |   | ||| ||| |||| |||| | |||||||||||    
T  41276736 gcaataggattaaaaaaacttacttg-tttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgtacct-tggagatcaaaaaacgta 41276833  T
Q  308 acaatggagttttgaaaactcctatg 333  Q
    |||||||||||||| |||||||||||    
T  41276834 acaatggagttttggaaactcctatg 41276859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 22550701 - 22550772
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    ||||||| | ||| |||||| |||||| ||||| |||||| |||||||| |||||||||||||||||||||||    
T  22550701 cacaaaacaacaatgcaataggattcagaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 22550772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 41016636 - 41016579
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| || ||| |||||||| |||||||||||||||||||||||    
T  41016636 gcaataggattcaaaaaacttaattg-tttttgtgattgaaattggcttggaatggctt 41016579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 45066212 - 45066269
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  45066212 gcaataggattcaaaaaacttacttg-tttttgtgattgaaattggcttgtaatggctt 45066269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 18438839 - 18438791
Alignment:
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  18438839 gattcaaaaaacttacttg-tttttgtgattgaaattggcttggaatggc 18438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 332
Target Start/End: Complemental strand, 41855600 - 41855464
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 294  Q
    ||||||| | ||| |||||  |||||||||||| |||||| |||||||| |||||||||| |||||||| |||    ||  | ||| ||||||| | |      
T  41855600 cacaaaacaacaatgcaatgggattcaaaaaacttacttg-tttttgtgattgaaattggtttggaatgacttcaaattgctcaaaatcgcaccaaggag 41855502  T
Q  295 agcaaaaaacgtaacaatggagttttgaaaactcctat 332  Q
    |  |||||||| ||||||||||||||||||||||||||    
T  41855501 aataaaaaacgcaacaatggagttttgaaaactcctat 41855464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 31170631 - 31170580
Alignment:
Q  216 gattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctta 268  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  31170631 gattcaaaacacttacttgatttt-gtgcttgaaattggcttggaatgactta 31170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 42605085 - 42605138
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    |||||| |||||||||||| ||||| |||| |||| |||||||||||||||||||    
T  42605085 gcaatatgattcaaaaaacttactt-atttctgtgattgaaattggcttggaatg 42605138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 44052076 - 44052133
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||| ||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  44052076 gcaataggattaaaaaaacttacttg-tttttgtgattgaaattggcttgaaatggctt 44052133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 15031017 - 15030972
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||| ||||| |||||||||||||||| |||||    
T  15031017 aaaaacgcaacaatggaattttggaaactcctatgcagttctgttc 15030972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 22519502 - 22519547
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  22519502 aaaaacgcaacaatggagttttggaaactcctatgaagttctgttc 22519547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 26455613 - 26455650
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatgc 334  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  26455613 caaaaaatgtaacaatggagttttggaaactcctatgc 26455650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 45066309 - 45066346
Alignment:
Q  307 aacaatggagttttgaaaactcctatgcagttttgttc 344  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  45066309 aacaatggagttttggaaactcctatgcagttctgttc 45066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 14120558 - 14120634
Alignment:
Q  249 aattggcttggaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagttttgaaaa 325  Q
    ||||||||||||||| |||| | || |||||| ||||||||||| |   |||||||| |||||| || |||||||||    
T  14120558 aattggcttggaatgacttaagcttggtgaaaatcgcacctatgaataaaaaaaacgcaacaatagaattttgaaaa 14120634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 28168463 - 28168506
Alignment:
Q  219 tcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||    
T  28168463 tcaaaaaacttacttg-tttttgtgattgaaattggcttggaatg 28168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 40703997 - 40704063
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatg 263  Q
    ||||||| | ||| |||||| |||||||||| | |||||| |||||||| |||||||||||||||||||    
T  40703997 cacaaaacaacaatgcaatatgattcaaaaa-cttacttg-tttttgtgattgaaattggcttggaatg 40704063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 44052163 - 44052199
Alignment:
Q  297 caaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
    |||||||||||||||| |||||||| |||||||||||    
T  44052163 caaaaaacgtaacaatagagttttggaaactcctatg 44052199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 1999 - 2141
Alignment:
Q  190 tcaatcacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacct 289  Q
    |||||||||||| | |||  |||||  ||||| ||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1999 tcaatcacaaaacatcaatacaatagaattcacaaaacttacttg-tttttgtgcttgaaattgacttggaatggcttatgctttgtgaaattcgcacct 2097  T
Q  290 atggaagcaaaaaacgtaacaatggagttttgaaaactcctatg 333  Q
     ||||||||||||| | ||||||||||||||| |||||||||||    
T  2098 ttggaagcaaaaaatgcaacaatggagttttggaaactcctatg 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 16628 - 16559
Alignment:
Q  195 cacaaaatagcaacgcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggc 265  Q
    ||||||| | ||| |||||| |||||||||||  |||||| |||||||||||||||||| |||||||||||    
T  16628 cacaaaacaacaatgcaataggattcaaaaaatttacttg-tttttgtgcttgaaattgacttggaatggc 16559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 3434 - 3491
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggcttggaatggctt 267  Q
    |||||| |||||| ||||| |||||| |||||||| |||||||||||||||||||||||    
T  3434 gcaataggattcagaaaacttacttg-tttttgtgattgaaattggcttggaatggctt 3491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 144 - 183
Alignment:
Q  299 aaaaacgtaacaatggagttttgaaaactcctatgcagtt 338  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  144 aaaaacgcaacaatggagttttggaaactcctatgcagtt 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 10900 - 10853
Alignment:
Q  209 gcaataagattcaaaaaacctacttgatttttgtgcttgaaattggctt 257  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||    
T  10900 gcaatatgattcaaaaaacttacttg-tttttgtgattgaaattggctt 10853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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