View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3083_high_29 (Length: 279)
Name: NF3083_high_29
Description: NF3083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3083_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 3522309 - 3522572
Alignment:
| Q |
1 |
acttttcagaacgtatagttacggttagctatgttcccgatattacaggtccgagaactctcattcattgtgttcaagaagctagccgtggctccaaggt |
100 |
Q |
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| T |
3522309 |
acttttcagaacgtatagttacggttagctatgttcccgatattacaggtccgagaactctcattcaatgtgttcaagaagctagccgtggctccaaggt |
3522408 |
T |
|
| Q |
101 |
gtatcgagcaactttgtattctccttcggggcgaagagaaagggataaggttaatgaaattcacatgtatagggatcagtttttgttaagctgcttgttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3522409 |
gtatcgagcaactttgtattctccttcggggcgaagagaaagggataaggttaatgaaattcacatgtatagggatcagtttttgttaagctgcttgttt |
3522508 |
T |
|
| Q |
201 |
tctgttcctgtttttgtgtttgccatggtgcttcctatgcttcctccgtatggcaactggttga |
264 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3522509 |
tctgttcccgtttttgtgtttgccatggtgcttcctatgcttcctccgtatggcaactggttga |
3522572 |
T |
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