View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3083_low_27 (Length: 295)

Name: NF3083_low_27
Description: NF3083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3083_low_27
NF3083_low_27
[»] chr8 (39 HSPs)
chr8 (169-295)||(22014180-22014304)
chr8 (169-294)||(23018619-23018742)
chr8 (169-295)||(36677646-36677771)
chr8 (169-289)||(21720-21838)
chr8 (173-295)||(7344572-7344692)
chr8 (173-295)||(17924298-17924418)
chr8 (169-295)||(26663048-26663172)
chr8 (168-293)||(1056218-1056341)
chr8 (185-295)||(8419354-8419462)
chr8 (173-295)||(32375589-32375709)
chr8 (169-282)||(2878518-2878629)
chr8 (169-295)||(15030818-15030942)
chr8 (169-295)||(45066376-45066500)
chr8 (178-267)||(17924044-17924131)
chr8 (173-284)||(483721-483829)
chr8 (168-238)||(184308-184376)
chr8 (169-295)||(184567-184691)
chr8 (201-284)||(22519622-22519704)
chr8 (169-295)||(36677944-36678068)
chr8 (201-291)||(22014454-22014544)
chr8 (169-291)||(2335167-2335286)
chr8 (201-291)||(1052522-1052612)
chr8 (169-284)||(42481460-42481574)
chr8 (170-289)||(15036723-15036840)
chr8 (201-289)||(43211496-43211584)
chr8 (169-291)||(23022306-23022426)
chr8 (201-287)||(26659418-26659504)
chr8 (234-295)||(22519577-22519638)
chr8 (169-256)||(25588-25673)
chr8 (201-269)||(22510512-22510580)
chr8 (201-291)||(10749693-10749782)
chr8 (201-295)||(22550880-22550973)
chr8 (201-291)||(45409836-45409925)
chr8 (234-295)||(483813-483874)
chr8 (169-241)||(489695-489765)
chr8 (169-291)||(27501535-27501654)
chr8 (201-290)||(30305563-30305653)
chr8 (168-269)||(42485579-42485678)
chr8 (173-240)||(30301160-30301224)
[»] chr7 (38 HSPs)
chr7 (169-295)||(10097850-10097974)
chr7 (169-293)||(603713-603835)
chr7 (169-295)||(41884141-41884265)
chr7 (167-295)||(35606721-35606847)
chr7 (173-295)||(45767876-45767995)
chr7 (173-289)||(43619643-43619757)
chr7 (169-284)||(48407347-48407460)
chr7 (168-295)||(15074243-15074368)
chr7 (169-284)||(16636268-16636381)
chr7 (169-284)||(17459257-17459370)
chr7 (169-284)||(17593844-17593957)
chr7 (168-295)||(30791023-30791148)
chr7 (173-291)||(40141245-40141361)
chr7 (201-295)||(20564037-20564131)
chr7 (169-284)||(10098267-10098379)
chr7 (201-284)||(9365610-9365692)
chr7 (169-290)||(42508047-42508166)
chr7 (169-284)||(20566386-20566498)
chr7 (169-295)||(7975624-7975748)
chr7 (169-295)||(18105307-18105431)
chr7 (169-295)||(10098132-10098256)
chr7 (169-291)||(41880448-41880568)
chr7 (168-291)||(7003-7123)
chr7 (201-291)||(17834452-17834541)
chr7 (201-287)||(48403336-48403422)
chr7 (169-292)||(10524375-10524495)
chr7 (169-291)||(8066-8185)
chr7 (169-287)||(17465736-17465852)
chr7 (169-287)||(17587362-17587478)
chr7 (169-291)||(18109793-18109913)
chr7 (169-255)||(35610470-35610554)
chr7 (234-295)||(9365676-9365737)
chr7 (234-295)||(10098363-10098424)
chr7 (201-288)||(45763343-45763431)
chr7 (201-291)||(40928946-40929036)
chr7 (169-291)||(46907474-46907590)
chr7 (169-241)||(38083742-38083812)
chr7 (247-295)||(15070365-15070413)
[»] chr1 (29 HSPs)
chr1 (169-295)||(8548684-8548808)
chr1 (169-295)||(3728669-3728793)
chr1 (173-295)||(3943912-3944032)
chr1 (183-295)||(29622439-29622549)
chr1 (169-295)||(15051363-15051487)
chr1 (169-295)||(26879310-26879434)
chr1 (173-295)||(38771567-38771687)
chr1 (168-291)||(20353954-20354075)
chr1 (173-295)||(3993858-3993978)
chr1 (169-284)||(19928871-19928984)
chr1 (168-269)||(20556831-20556930)
chr1 (201-287)||(22397784-22397870)
chr1 (201-291)||(26875657-26875747)
chr1 (164-291)||(19914396-19914520)
chr1 (201-255)||(8473747-8473801)
chr1 (169-269)||(30889995-30890093)
chr1 (169-288)||(2365169-2365286)
chr1 (168-291)||(3732372-3732493)
chr1 (201-269)||(13629368-13629436)
chr1 (169-284)||(38633179-38633292)
chr1 (201-295)||(19161857-19161950)
chr1 (169-269)||(19924689-19924787)
chr1 (201-266)||(44621161-44621226)
chr1 (247-295)||(13633879-13633927)
chr1 (201-291)||(45977717-45977806)
chr1 (234-295)||(19928826-19928887)
chr1 (169-241)||(30195452-30195522)
chr1 (201-288)||(3983050-3983138)
chr1 (201-288)||(31945883-31945971)
[»] chr2 (46 HSPs)
chr2 (164-295)||(44100813-44100942)
chr2 (173-295)||(5351747-5351867)
chr2 (169-295)||(30493293-30493417)
chr2 (173-295)||(41564507-41564627)
chr2 (169-285)||(5355556-5355670)
chr2 (169-295)||(7267459-7267583)
chr2 (169-295)||(43536036-43536160)
chr2 (173-289)||(208948-209062)
chr2 (173-289)||(38950548-38950661)
chr2 (173-295)||(18000170-18000290)
chr2 (169-284)||(15835237-15835350)
chr2 (169-295)||(17420502-17420626)
chr2 (178-289)||(10619942-10620051)
chr2 (169-291)||(21998148-21998268)
chr2 (169-284)||(42499687-42499799)
chr2 (173-284)||(3935768-3935876)
chr2 (169-284)||(17426425-17426537)
chr2 (172-295)||(22003416-22003537)
chr2 (169-289)||(43619163-43619281)
chr2 (169-295)||(28468575-28468699)
chr2 (169-269)||(15831061-15831159)
chr2 (169-269)||(20937832-20937930)
chr2 (169-291)||(45428550-45428670)
chr2 (169-269)||(30496990-30497088)
chr2 (169-288)||(43312666-43312783)
chr2 (168-262)||(43984382-43984474)
chr2 (168-269)||(3940770-3940869)
chr2 (169-269)||(42505803-42505901)
chr2 (169-288)||(26543238-26543355)
chr2 (201-269)||(43978500-43978568)
chr2 (201-291)||(28419372-28419461)
chr2 (201-291)||(41273267-41273356)
chr2 (169-269)||(39793897-39793995)
chr2 (169-269)||(39800693-39800791)
chr2 (234-295)||(42499783-42499844)
chr2 (201-269)||(5351928-5351996)
chr2 (201-289)||(7185020-7185107)
chr2 (168-291)||(10424773-10424893)
chr2 (234-294)||(17426381-17426441)
chr2 (169-291)||(39947534-39947653)
chr2 (248-295)||(43984316-43984363)
chr2 (201-279)||(44100666-44100744)
chr2 (201-288)||(213474-213562)
chr2 (201-288)||(10624487-10624575)
chr2 (169-256)||(29074056-29074141)
chr2 (172-291)||(30803037-30803153)
[»] chr5 (23 HSPs)
chr5 (169-295)||(28238073-28238197)
chr5 (172-295)||(28876580-28876701)
chr5 (173-295)||(14280915-14281035)
chr5 (169-293)||(37814516-37814638)
chr5 (77-168)||(472282-472373)
chr5 (201-290)||(8580499-8580588)
chr5 (169-284)||(19035139-19035251)
chr5 (169-295)||(19041132-19041256)
chr5 (169-295)||(13837658-13837782)
chr5 (169-295)||(27659874-27659998)
chr5 (169-269)||(11027029-11027127)
chr5 (169-290)||(8574617-8574735)
chr5 (203-295)||(30711174-30711266)
chr5 (201-266)||(38853443-38853508)
chr5 (169-241)||(38860237-38860307)
chr5 (251-290)||(8574761-8574800)
chr5 (201-290)||(14279813-14279903)
chr5 (201-287)||(30705101-30705187)
chr5 (233-295)||(38855726-38855788)
chr5 (169-269)||(11033503-11033601)
chr5 (169-269)||(28241840-28241938)
chr5 (234-295)||(19035235-19035296)
chr5 (201-289)||(14684-14771)
[»] chr4 (43 HSPs)
chr4 (169-295)||(31425333-31425457)
chr4 (169-295)||(37562999-37563123)
chr4 (167-295)||(49169112-49169238)
chr4 (167-295)||(1089599-1089725)
chr4 (169-291)||(54633746-54633866)
chr4 (183-295)||(40358295-40358405)
chr4 (173-295)||(49563778-49563898)
chr4 (169-289)||(30723055-30723173)
chr4 (169-289)||(1087794-1087912)
chr4 (169-295)||(41800952-41801076)
chr4 (169-295)||(26792259-26792383)
chr4 (169-284)||(55799589-55799699)
chr4 (169-284)||(49096378-49096490)
chr4 (169-295)||(54634030-54634154)
chr4 (201-289)||(31242180-31242268)
chr4 (169-284)||(41793265-41793377)
chr4 (169-295)||(26932518-26932642)
chr4 (169-295)||(52529147-52529271)
chr4 (173-262)||(6175785-6175872)
chr4 (201-295)||(30726756-30726850)
chr4 (201-295)||(37563295-37563389)
chr4 (169-269)||(13182139-13182237)
chr4 (201-287)||(31421670-31421756)
chr4 (201-295)||(39773368-39773462)
chr4 (169-269)||(6181832-6181930)
chr4 (165-269)||(49090377-49090479)
chr4 (201-269)||(1309155-1309223)
chr4 (169-268)||(40352300-40352397)
chr4 (201-291)||(16473699-16473788)
chr4 (205-291)||(28235580-28235665)
chr4 (201-255)||(49165025-49165079)
chr4 (201-269)||(9893305-9893373)
chr4 (169-295)||(3408255-3408379)
chr4 (169-295)||(21022903-21023026)
chr4 (169-269)||(13173168-13173266)
chr4 (169-221)||(39773630-39773680)
chr4 (247-295)||(41793374-41793422)
chr4 (201-290)||(49566469-49566559)
chr4 (169-291)||(55587293-55587409)
chr4 (201-295)||(56565722-56565815)
chr4 (234-295)||(6175874-6175935)
chr4 (169-256)||(51037521-51037606)
chr4 (247-295)||(55799544-55799592)
[»] chr3 (53 HSPs)
chr3 (169-295)||(3501910-3502034)
chr3 (169-295)||(46697645-46697769)
chr3 (169-295)||(41844083-41844207)
chr3 (201-295)||(1835342-1835436)
chr3 (168-287)||(2857979-2858096)
chr3 (169-295)||(35743597-35743719)
chr3 (173-295)||(3953230-3953350)
chr3 (169-289)||(9426565-9426683)
chr3 (173-295)||(6745341-6745461)
chr3 (173-295)||(8156446-8156566)
chr3 (169-295)||(50477114-50477238)
chr3 (166-295)||(49144471-49144598)
chr3 (169-295)||(2967940-2968064)
chr3 (173-295)||(54392043-54392163)
chr3 (173-295)||(30943127-30943247)
chr3 (169-284)||(42900111-42900224)
chr3 (169-284)||(46406651-46406763)
chr3 (167-295)||(41844379-41844505)
chr3 (169-284)||(34051373-34051485)
chr3 (169-284)||(49138515-49138627)
chr3 (169-251)||(25191855-25191935)
chr3 (169-291)||(29008820-29008940)
chr3 (169-284)||(2950267-2950379)
chr3 (169-291)||(1835084-1835204)
chr3 (169-289)||(3975666-3975784)
chr3 (169-287)||(42904205-42904321)
chr3 (201-295)||(4015144-4015237)
chr3 (201-295)||(8475791-8475884)
chr3 (201-295)||(42165128-42165221)
chr3 (203-295)||(2645422-2645514)
chr3 (201-269)||(16444572-16444640)
chr3 (169-291)||(34045342-34045462)
chr3 (201-287)||(50481406-50481492)
chr3 (169-269)||(46388892-46388990)
chr3 (247-291)||(35743429-35743473)
chr3 (169-295)||(3493523-3493647)
chr3 (169-295)||(3497217-3497341)
chr3 (234-295)||(2950363-2950424)
chr3 (234-295)||(46406606-46406667)
chr3 (234-295)||(49138611-49138672)
chr3 (201-269)||(54386097-54386166)
chr3 (219-295)||(1293359-1293435)
chr3 (247-295)||(34051328-34051376)
chr3 (169-291)||(27739586-27739705)
chr3 (201-291)||(4331839-4331928)
chr3 (201-291)||(42166429-42166518)
chr3 (201-285)||(8160994-8161079)
chr3 (201-288)||(3948692-3948780)
chr3 (224-284)||(16611088-16611147)
chr3 (224-284)||(22048106-22048165)
chr3 (201-288)||(30947675-30947763)
chr3 (201-269)||(46702066-46702134)
chr3 (169-256)||(50998733-50998818)
[»] chr6 (23 HSPs)
chr6 (171-295)||(26712238-26712360)
chr6 (169-289)||(30825984-30826102)
chr6 (169-295)||(18351658-18351782)
chr6 (169-295)||(27616649-27616773)
chr6 (168-289)||(1608251-1608370)
chr6 (169-284)||(27641778-27641890)
chr6 (201-284)||(6207120-6207202)
chr6 (169-295)||(13382563-13382687)
chr6 (165-295)||(28249815-28249943)
chr6 (169-284)||(11694087-11694199)
chr6 (205-291)||(17597543-17597629)
chr6 (201-295)||(26712012-26712106)
chr6 (169-284)||(32691085-32691198)
chr6 (201-255)||(30829706-30829760)
chr6 (169-291)||(2109452-2109571)
chr6 (169-287)||(11688048-11688164)
chr6 (201-295)||(26351111-26351204)
chr6 (234-295)||(6207075-6207136)
chr6 (234-295)||(32691182-32691243)
chr6 (201-291)||(26349940-26350028)
chr6 (169-291)||(13164279-13164395)
chr6 (261-295)||(24885140-24885174)
chr6 (247-295)||(11694042-11694090)
[»] scaffold0744 (1 HSPs)
scaffold0744 (169-295)||(438-561)
[»] scaffold0293 (1 HSPs)
scaffold0293 (164-295)||(737-866)
[»] scaffold0014 (2 HSPs)
scaffold0014 (169-284)||(84481-84593)
scaffold0014 (234-295)||(84577-84638)
[»] scaffold1606 (1 HSPs)
scaffold1606 (169-262)||(9-100)
[»] scaffold0038 (1 HSPs)
scaffold0038 (165-295)||(49977-50105)
[»] scaffold0494 (2 HSPs)
scaffold0494 (169-269)||(11494-11592)
scaffold0494 (233-295)||(5327-5389)
[»] scaffold0634 (1 HSPs)
scaffold0634 (169-295)||(7352-7476)
[»] scaffold0199 (1 HSPs)
scaffold0199 (169-295)||(10587-10710)
[»] scaffold0180 (1 HSPs)
scaffold0180 (169-293)||(15639-15760)
[»] scaffold0101 (2 HSPs)
scaffold0101 (234-295)||(41037-41098)
scaffold0101 (169-269)||(41097-41195)
[»] scaffold0011 (1 HSPs)
scaffold0011 (201-295)||(236275-236368)
[»] scaffold0504 (1 HSPs)
scaffold0504 (201-295)||(12347-12440)


Alignment Details
Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 22014180 - 22014304
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22014180 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 22014277  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  22014278 ggcagttaactgccgaggaaaacctcg 22014304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 23018619 - 23018742
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  23018619 gagaattgctgtttccacatcttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggc 23018716  T
Q  269 gatagttaactgccgaggaaaacctc 294  Q
    | |||||||||||| |||||||||||    
T  23018717 ggtagttaactgccaaggaaaacctc 23018742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 36677646 - 36677771
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36677646 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccaaagtttttaggaaaccggc 36677743  T
Q  269 gatagttaactgcc-gaggaaaacctcg 295  Q
    |  ||||||||||| |||||||||||||    
T  36677744 ggcagttaactgccggaggaaaacctcg 36677771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 21720 - 21838
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  21720 gagaattgttgttcccacatcttgtttggctgtg--ccacacgagtaaaatacgaaaatgccattcggcagtttgctaccgaagtttttaggcaaccggc 21817  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  ||||||||||||||||||    
T  21818 ggcagttaactgccgaggaaa 21838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 7344692 - 7344572
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  7344692 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 7344595  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  7344594 gttaactgccgaggaaaacctcg 7344572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 17924418 - 17924298
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  17924418 attgttgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 17924321  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    ||||||||||||| |||||||||    
T  17924320 gttaactgccgagaaaaacctcg 17924298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 26663172 - 26663048
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || |||||| |||||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  26663172 gagaattgctattcccacattttgtttggctgtg--ccacacgagtaaaatacgaaaatgtctttcagcagtttgctaccgaagtttttaggcaaccggc 26663075  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  26663074 ggcagttaactgccgaggaaaacctcg 26663048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 1056341 - 1056218
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||||||||||||| |||||| ||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |    
T  1056341 cgagaattgttgttcccacatcttgtttgactgtgt--cacacgagtaaaatacgaaaatgcccttcggcagtttgctactgaagtttttaggcaaccag 1056244  T
Q  268 cgatagttaactgccgaggaaaacct 293  Q
    ||  ||||||||||||||||||||||    
T  1056243 cggcagttaactgccgaggaaaacct 1056218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 185 - 295
Target Start/End: Original strand, 8419354 - 8419462
Alignment:
Q  185 acatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||||||||||||||  ||||||||||||||||| |||||  | ||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  8419354 acatgttgtttggctgtg--ccacacgagtaaaataccaaaatatccttcggcagtttgctaccgaggtttttaggaaaccggcggcagttaactgccga 8419451  T
Q  285 ggaaaacctcg 295  Q
    |||||||||||    
T  8419452 ggaaaacctcg 8419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 32375589 - 32375709
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||  ||||| || ||| ||||||||||||||| ||||||||||||||||||  |    
T  32375589 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatatcaaaatacccttcagcagtttgctaccgaggtttttaggaaaccggcggca 32375686  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  32375687 gttaactgccgaggaaaacctcg 32375709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 2878518 - 2878629
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |  | ||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||| |    
T  2878518 gagaattgttgttcctgcgtgttgtttggctgtgt--cacacgagtaaaataccaaaatgcccttcggcagtttgccaccgaagtttttagtaaaccgac 2878615  T
Q  269 gatagttaactgcc 282  Q
    || |||||||||||    
T  2878616 gacagttaactgcc 2878629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 15030818 - 15030942
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||| |||   || ||||||||||||||||||||||    
T  15030818 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 15030915  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  15030916 ggcagttaactgccgaggaaaacctcg 15030942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 45066500 - 45066376
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||| |||   || ||||||||||||||||||||||    
T  45066500 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 45066403  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  45066402 ggcagttaactgccgaggaaaacctcg 45066376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 17924044 - 17924131
Alignment:
Q  178 tgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||    
T  17924044 tgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccgg 17924131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 483721 - 483829
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    ||||||||| |||||| | |||||| ||||  ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||  |    
T  483721 attgttgttcccacatatagtttggttgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttagg-aaccggcggca 483817  T
Q  273 gttaactgccga 284  Q
    ||||||||||||    
T  483818 gttaactgccga 483829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 184308 - 184376
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggca 238  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  184308 cgagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggca 184376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 184691 - 184567
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  184691 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 184594  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  184593 ggcagttaactgccgaggaaaacctcg 184567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 22519704 - 22519622
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||  |||||||| ||||    
T  22519704 tgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttagg-aaccggcggcagttaactaccga 22519622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 36678068 - 36677944
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  36678068 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 36677971  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  36677970 ggcagttaactgccgaggaaaacctcg 36677944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 22014544 - 22014454
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    ||||||||||||||||| |||| ||||||| ||||| |||   || |||||||||||||||||||||||  ||||||||||||||||||||    
T  22014544 tgtgccacacgagtaaattacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaac 22014454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 2335286 - 2335167
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||  |||||||||  ||||||||||||| || ||  ||||    
T  2335286 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagtttt-agaaatacggc 2335190  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  2335189 tgcagttaactgccgaggaaaac 2335167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 1052522 - 1052612
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||| ||||||||||||||||||| ||||| ||||  || |||||||||||||  ||||||||  || |||||||||||||||||    
T  1052522 tgtgccacaccagtaaaatacgaaaatgcccttcggtagttaactgccgaagtttttagtgaaccggcggcagctaactgccgaggaaaac 1052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 42481460 - 42481574
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||||||| ||||  ||| |||||||||||||||  ||||||||||||||||  ||||||||   || ||||||||||| ||||||||||||||||||||    
T  42481460 gagaattgctgttctcacgtgttgtttggctgtg--ccacacgagtaaaatatcaaaatgccccctcagcagtttgctatcgaagtttttaggaaaccgg 42481557  T
Q  268 cgatagttaactgccga 284  Q
    ||  |||||| ||||||    
T  42481558 cggcagttaattgccga 42481574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 15036840 - 15036723
Alignment:
Q  170 agaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    |||||||||||| |||||  | |||||||||||  ||||||||||||| |||| ||||||| ||||| |||    | || ||||||||||||||||||||    
T  15036840 agaattgttgttcccacacatagtttggctgtg--ccacacgagtaaattacgcaaatgcccttcggtagtaaattgccaaagtttttaggaaaccggcg 15036743  T
Q  270 atagttaactgccgaggaaa 289  Q
      ||||||||||||||||||    
T  15036742 gcagttaactgccgaggaaa 15036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 43211496 - 43211584
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaa 289  Q
    |||||||||||||||   |||||||||||| ||||||||||| || ||||| ||||||| |||||| ||  ||||||||||||||||||    
T  43211496 tgtgccacacgagtactttacgaaaatgcccttcggcagtttactgccgaaatttttagtaaaccgacggcagttaactgccgaggaaa 43211584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 23022426 - 23022306
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  |||||  ||||||||||||||||||| ||||||||||  ||  ||||||||||||  |||||||    
T  23022426 gagaattgttgttcccacatatagtatggctgtg--ccacatcagtaaaatacgaaaatgcccttcggcagttaactgtcgaagtttttagtgaaccggc 23022329  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  || ||||| |||||||||||    
T  23022328 ggcagctaactaccgaggaaaac 23022306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 26659418 - 26659504
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    |||||||||| ||||||||||||||||||| ||||||||||  || |||||||||||||  ||||||||  || ||||| |||||||    
T  26659418 tgtgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttagtgaaccggcggcagctaactaccgagga 26659504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 22519638 - 22519577
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  |||||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  22519638 cggcagttaactaccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 22519577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 25673 - 25588
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttt 256  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||  |||||||| ||||||||||  || ||||||||||    
T  25673 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagtttt 25588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 22510512 - 22510580
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  ||||||||    
T  22510512 tgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggcg 22510580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 10749782 - 10749693
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    ||||||||||||| |   |||||||||||| ||||||||||  || |||||| |||||| ||||| |||  ||||||||||||||||||||    
T  10749782 tgtgccacacgagaactttacgaaaatgcccttcggcagttaactgccgaag-ttttagtaaaccagcggcagttaactgccgaggaaaac 10749693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 22550973 - 22550880
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||||  |||  ||||||| ||||||||||  || |||||||||| || || |||||   ||||||||||||||||||||||||    
T  22550973 tgtgccacacgagtaatttacctaaatgcccttcggcagttaactgccgaagtttt-agaaatccggctgcagttaactgccgaggaaaacctcg 22550880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 45409836 - 45409925
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   |||||||||||| ||||||||||  || |||||| |||||| ||| |||||  ||||||||||||||| ||||    
T  45409836 tgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaag-ttttagtaaatcggcggcagttaactgccgaggcaaac 45409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 483813 - 483874
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  483813 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 483874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 489765 - 489695
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtt 241  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||    
T  489765 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaatactaaaatgcccttcggcagtt 489695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 27501535 - 27501654
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||| | | |||||||||||  ||||||||||||| |||  |||| ||| |||||||||  ||||||||||||| || ||  ||||    
T  27501535 gagaattgctgttcccacttttggtttggctgtg--ccacacgagtaaattactcaaatacctctcggcagttaactaccgaagtttt-agaaatacggc 27501631  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  27501632 tgcagttaactgccgaggaaaac 27501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 30305653 - 30305563
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaa 290  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||||    
T  30305653 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaaaa 30305563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 42485678 - 42485579
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    ||||||||| |||| |||||| | || ||||||||  ||||||||||||||||  |||||| | ||||||||||  ||  ||||||||| || |||||||    
T  42485678 cgagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaatatcaaaatgtccttcggcagttaactgtcgaagttttgagtaaaccgg 42485581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 30301160 - 30301224
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagt 240  Q
    |||| |||| ||||||||||||||    ||||||||||||||||||||| ||||| || |||||||||    
T  30301160 attgctgttcccacatgttgtttgc---tgtgccacacgagtaaaataccaaaatacccttcggcagt 30301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 10097850 - 10097974
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  10097850 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggc 10097947  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  10097948 ggcagttaactgccgaggaaaacctcg 10097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 293
Target Start/End: Original strand, 603713 - 603835
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  603713 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 603810  T
Q  269 gatagttaactgccgaggaaaacct 293  Q
    |  ||||||||||||||||||||||    
T  603811 ggcagttaactgccgaggaaaacct 603835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 41884265 - 41884141
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || ||||||||||| ||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  41884265 gagaattgctattcccacatgttgtgtggctgtg--ccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggc 41884168  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  41884167 ggcagttaactgccgaggaaaacctcg 41884141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 35606721 - 35606847
Alignment:
Q  167 acgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    ||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| || ||    
T  35606721 acgagaattgttgttcccacatgttgtttgcctgtg--ccacacgagtaaaatacgaaaatgctcttcggcagtttgctatcgaagtttttaggcaatcg 35606818  T
Q  267 gcgatagttaactgccgaggaaaacctcg 295  Q
     ||  ||||||||||||||||||||||||    
T  35606819 acggcagttaactgccgaggaaaacctcg 35606847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45767995 - 45767876
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| |||||| |||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  45767995 attgctgttcccacat-ttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 45767899  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  45767898 gttaactgccgaggaaaacctcg 45767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 43619643 - 43619757
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| |||||  | ||||||||||||||||||| ||||||||||||||||||  |    
T  43619643 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatatccttcggcagtttgctaccgaggtttttaggaaaccggcggca 43619740  T
Q  273 gttaactgccgaggaaa 289  Q
    |||||||||||||||||    
T  43619741 gttaactgccgaggaaa 43619757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 48407460 - 48407347
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  48407460 gagaattgctcttcccacatgttgtttggctgtg--ccacacgagtaatatactaaaatgcccctcggcagtttgctaccgaagtttttaggaaaccggc 48407363  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  48407362 ggcagttaactgccga 48407347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 15074368 - 15074243
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||||||||||||| |||||| | || ||||||||  |||||||||||||||||||||||||| ||||| |||   || |||||||| ||||||||||||    
T  15074368 cgagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatacgaaaatgcccttcggtagtaaactgccgaagttcttaggaaaccgg 15074271  T
Q  268 cgatagttaactgccgaggaaaacctcg 295  Q
    ||  ||||||||||||||||||||||||    
T  15074270 cggcagttaactgccgaggaaaacctcg 15074243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 16636381 - 16636268
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| ||  ||||||||  || ||||||||||||||||||||||||||||||| |    
T  16636381 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttaggaaaccgac 16636284  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  16636283 ggcagttaactgccga 16636268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 17459257 - 17459370
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| ||  ||||||||  || ||||||||||||||||||||||||||||||| |    
T  17459257 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttaggaaaccgac 17459354  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  17459355 ggcagttaactgccga 17459370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 17593957 - 17593844
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| ||  ||||||||  || ||||||||||||||||||||||||||||||| |    
T  17593957 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttaggaaaccgac 17593860  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  17593859 ggcagttaactgccga 17593844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 30791148 - 30791023
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || |||| |||| |||| |||| ||||||||||||||||    
T  30791148 cgagtattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcgacagtatgctgccgaggtttttaggaaaccgg 30791051  T
Q  268 cgatagttaactgccgaggaaaacctcg 295  Q
    ||  |||||||| |||||||||||||||    
T  30791050 cggcagttaactaccgaggaaaacctcg 30791023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 40141361 - 40141245
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    ||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||| |||||| | |||||||||||||||||||||||| |    
T  40141361 attgttgttcccacatatagtttggctgtg--ccacacgagtaaattactcaaatgcccttcggtagtttgttgccgaagtttttaggaaaccggcgaca 40141264  T
Q  273 gttaactgccgaggaaaac 291  Q
    |||||||||||||||||||    
T  40141263 gttaactgccgaggaaaac 40141245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 20564037 - 20564131
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||  ||||| ||||||| ||||||||||    
T  20564037 tgtgccatacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggcggcagttagctgccgaagaaaacctcg 20564131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 10098267 - 10098379
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  10098267 gagaattgttgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 10098363  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  10098364 ggcagttaactgccga 10098379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 9365610 - 9365692
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  9365610 tgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaagtttttagg-aaccggcggcagttaactgccga 9365692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 42508166 - 42508047
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  |||||||||||||||||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  42508166 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 42508069  T
Q  269 gatagttaactgccgaggaaaa 290  Q
    |  |||||||||| ||||||||    
T  42508068 ggcagttaactgctgaggaaaa 42508047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 20566498 - 20566386
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  ||| |||||||||||||| ||||||||| || ||||    
T  20566498 gagaattgttgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcgacagtttgctaccgaggtttttagg-aatcggc 20566402  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  20566401 ggcagttaactgccga 20566386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 7975748 - 7975624
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||| ||||  |||||||||||   |||||||||| | |||||||||   || ||||||||||||| ||||||||    
T  7975748 gagaattgttgttcccacatttggtttggttgtg--ccacacgagtactttacgaaaatgtccttcggcagtaaactgccgaagtttttagtaaaccggc 7975651  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  7975650 ggcagttaactgccgaggaaaacctcg 7975624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 18105307 - 18105431
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || |||| ||   |||||||||||||||||| ||||| | ||||| |||   || ||||||||||||||||||||||    
T  18105307 gagaattgttgttcccacatatagtatggccgta--ccacacgagtaaaatacggaaatgtccttcggtagtaaactgccgaagtttttaggaaaccggc 18105404  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  18105405 ggcagttaactgccgaggaaaacctcg 18105431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 10098256 - 10098132
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  10098256 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 10098159  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
       ||||||||||||||||||||||||    
T  10098158 tgcagttaactgccgaggaaaacctcg 10098132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 41880448 - 41880568
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||| ||||  |||||||||||||||||||||||||| ||||||||||  |||||||||||| |||  |||||||    
T  41880448 gagaattgttgttcccacatatagtatggttgtg--ccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagtttgtagtgaaccggc 41880545  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  || | ||| |||||||||||    
T  41880546 ggcagcttactaccgaggaaaac 41880568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 7003 - 7123
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    ||||||||| |||| ||||||||||||||||||||  ||||||||||||| |||  |||||||  |||||||||  ||||||||||||| || ||  |||    
T  7003 cgagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagtttt-agaaatacgg 7099  T
Q  268 cgatagttaactgccgaggaaaac 291  Q
    |   ||||||||||||||||||||    
T  7100 ctgcagttaactgccgaggaaaac 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 17834452 - 17834541
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    ||||||||||||||||  || ||||||||| ||||||||||  || |||||| |||||| |||||||||  ||||||||||||||||||||    
T  17834452 tgtgccacacgagtaatttatgaaaatgcccttcggcagttaactgccgaag-ttttagtaaaccggcggcagttaactgccgaggaaaac 17834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 48403336 - 48403422
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    |||||||||| |||||||||| |||||||| ||||||||||  || ||||||||||||| |||||||||  || ||||| |||||||    
T  48403336 tgtgccacaccagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttttagcaaaccggcggcagctaactaccgagga 48403422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 10524495 - 10524375
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | ||||||||||||  |||||||||||| |||  |||||||  |||||||||  ||  ||||| |||||| ||||||      
T  10524495 gagaattgttgttcccacatttggtttggctgtgt--cacacgagtaaattactcaaatgcccctcggcagttaactgtcgaag-ttttagaaaaccgat 10524399  T
Q  269 gatagttaactgccgaggaaaacc 292  Q
    |  |||||||||||||||||||||    
T  10524398 ggcagttaactgccgaggaaaacc 10524375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 8185 - 8066
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||| |||||| |||  |||||||  |||||||||  |||| |||||||| || ||  ||||    
T  8185 gagaattgctgttcccacatgttgtttggctgtg--ccacacaagtaaattactcaaatgcccctcggcagttaactacagaagtttt-agaaatacggc 8089  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  8088 tgcagttaactgccgaggaaaac 8066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 17465852 - 17465736
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  |||||| |||||||||||||||| || ||||||||||  ||  |||| ||||||| ||||||||    
T  17465852 gagaattgatgttcccacatatagtatggctgtg--ccacaccagtaaaatacgaaaatacccttcggcagttaactgtcgaaatttttagtaaaccggc 17465755  T
Q  269 gatagttaactgccgagga 287  Q
    |  || ||||| |||||||    
T  17465754 ggcagctaactaccgagga 17465736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 17587362 - 17587478
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  |||||| |||||||||||||||| || ||||||||||  ||  |||| ||||||| ||||||||    
T  17587362 gagaattgatgttcccacatatagtatggctgtg--ccacaccagtaaaatacgaaaatacccttcggcagttaactgtcgaaatttttagtaaaccggc 17587459  T
Q  269 gatagttaactgccgagga 287  Q
    |  || ||||| |||||||    
T  17587460 ggcagctaactaccgagga 17587478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 18109913 - 18109793
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  | ||||||||||| ||   ||||||| |||||||||   ||  ||||||||||  | |||||||    
T  18109913 gagaattgttgttcccacatttggtttggctgtg--ctacacgagtaaattattcaaatgcccttcggcagtaaactgtcgaagtttttgtgcaaccggc 18109816  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||||||||||    
T  18109815 ggcagttaactgccgaggaaaac 18109793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 35610554 - 35610470
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagttt 255  Q
    |||||||| |||| |||||| | || ||||||||  |||||| ||||||||||||||||||| ||||||||||  || |||||||||    
T  35610554 gagaattgctgttcccacatatagtatggctgtg--ccacaccagtaaaatacgaaaatgccattcggcagttaactgccgaagttt 35610470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 9365676 - 9365737
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  9365676 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 9365737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 10098363 - 10098424
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  10098363 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 10098424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 45763343 - 45763431
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||| |||||||| ||||||||    
T  45763343 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcgacagttaactaccgaggaa 45763431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 40929036 - 40928946
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||| |||  |||  |||||||||||||||||   || |||||||||||  | |||||||   ||||||||||||||||||||    
T  40929036 tgtgccacacgaataatttactcaaatgcctttcggcagtaaactgccgaagtttttgtgcaaccggcagcagttaactgccgaggaaaac 40928946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 46907474 - 46907590
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||| ||  ||||||||||||| |||  ||||||| ||||||||||  || |||||    ||| |||||||||    
T  46907474 gagaattgctgttcccacatttggtttggctatg--ccacacgagtaaattactcaaatgcccttcggcagttaactgccgaa----ttatgaaaccggc 46907567  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  46907568 tgcagttaactgccgaggaaaac 46907590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 38083742 - 38083812
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtt 241  Q
    |||||||||||||||||||| | ||||||||||||  |||||||||| | |||  |||||||  |||||||||    
T  38083742 gagaattgttgtttccacatttggtttggctgtgt--cacacgagtacattactcaaatgcccctcggcagtt 38083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 15070365 - 15070413
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||  |||||| |||||  ||||||||||||||||||||||||    
T  15070365 ccgaagtttgaaggaaatcggcggcagttaactgccgaggaaaacctcg 15070413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 8548808 - 8548684
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8548808 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 8548711  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  8548710 ggcagttaactgccgaggaaaacctcg 8548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 3728669 - 3728793
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| |||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  3728669 gagaattgctgttcccacatcttgtttggctgtg--ccacacgagtaaaatacgaaaatgctcttcggcagtttgctaccgaagtttttaggcaaccggc 3728766  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  3728767 ggcagttaactgccgaggaaaacctcg 3728793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 3943912 - 3944032
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  3943912 attgctgtttccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 3944009  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  3944010 gttaactgccgaggaaaacctcg 3944032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 29622549 - 29622439
Alignment:
Q  183 ccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgcc 282  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||| ||||    
T  29622549 ccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaaccggcggcagttaattgcc 29622452  T
Q  283 gaggaaaacctcg 295  Q
    |||||||||||||    
T  29622451 gaggaaaacctcg 29622439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 15051487 - 15051363
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || ||||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  15051487 gagaattgctcttcccacatgttgtttggttgtgt--cacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtatttagtaaaccggc 15051390  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  15051389 ggcagttaactgccgaggaaaacctcg 15051363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 26879434 - 26879310
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26879434 gagaattgttgttcccacatatagtatggctgtg--ccacaccagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggc 26879337  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  26879336 ggcagttaactgccgaggaaaacctcg 26879310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 38771567 - 38771687
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  38771567 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 38771664  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  38771665 gttaactgccgaggaaaacctcg 38771687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 20354075 - 20353954
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||| ||| ||||||||||||||||    
T  20354075 cgaggattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctatcgaggtttttaggaaaccgg 20353978  T
Q  268 cgatagttaactgccgaggaaaac 291  Q
    ||  ||||||||||||||||||||    
T  20353977 cggcagttaactgccgaggaaaac 20353954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 3993978 - 3993858
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||  ||||| || ||||||||||||||| ||| ||||||||||||||||||  |    
T  3993978 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatatcaaaatacccttcggcagtttgctatcgaggtttttaggaaaccggcggca 3993881  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  3993880 gttaactgccgaggaaaacctcg 3993858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 19928984 - 19928871
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||||||  ||| ||||||||||| || |||||||||||||||||    
T  19928984 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatgcccctcgacagtttgctactgatgtttttaggaaaccggc 19928887  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  19928886 ggcagttaactgccga 19928871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 20556831 - 20556930
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||| ||| ||||||||||||||||    
T  20556831 cgaggattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctatcgaggtttttaggaaaccgg 20556928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 22397784 - 22397870
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    ||||||||||||||||||||| ||||| || ||||||||||  || |||||||||| || |||||||||  ||||||||||||||||    
T  22397784 tgtgccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagttttgagtaaaccggcggcagttaactgccgagga 22397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 26875657 - 26875747
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||| |||||||||| |||||||| ||||||||||  || |||||||||||||  ||||||||  || |||||||||||||||||    
T  26875657 tgtgccacaccagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttttagtgaaccggcggcagctaactgccgaggaaaac 26875747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 291
Target Start/End: Original strand, 19914396 - 19914520
Alignment:
Q  164 aacacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaa 263  Q
    |||| ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||  |||||||||  || |||||||||| || ||     
T  19914396 aacatgagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaattactcaaatgcccctcggcagttaacttccgaagtttt-agaaat 19914492  T
Q  264 ccggcgatagttaactgccgaggaaaac 291  Q
     ||||   ||||||||||||||||||||    
T  19914493 acggctgcagttaactgccgaggaaaac 19914520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 8473747 - 8473801
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  8473747 tgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 8473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 30889995 - 30890093
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || | |||||||| || ||||||||    
T  30889995 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgcagaagttttgagtaaaccggc 30890092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 2365169 - 2365286
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||  | |||||||||||  |||||||||||||  ||  ||||||| ||||||||||  || ||||||||||||| ||||||||    
T  2365169 gagaattgttgttcccacaattggtttggctgtg--ccacacgagtaaatgacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 2365266  T
Q  269 gatagttaactgccgaggaa 288  Q
    |  || ||||| ||||||||    
T  2365267 ggcagctaactaccgaggaa 2365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 3732493 - 3732372
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    ||||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  ||||||    
T  3732493 cgagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgccattcggcagttaactgccgaagttttgagtgaaccgg 3732396  T
Q  268 cgatagttaactgccgaggaaaac 291  Q
    ||  ||  |||| |||||||||||    
T  3732395 cggcagcaaactaccgaggaaaac 3732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 13629368 - 13629436
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| || |||||||||    
T  13629368 tgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtaaaccggcg 13629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 38633292 - 38633179
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||||||||  |||   || |||||||||||||| ||||| |    
T  38633292 gagaattgttgttcccacatatagtttggctgtg--ccacacgagtaaattactcaaatgcctttcgatagtaaactgccgaagtttttaggcaaccgac 38633195  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  38633194 ggcagttaactgccga 38633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 19161857 - 19161950
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||| ||||||| |||  ||||||||||||||||||  || |||||| |||||| || |||||   ||||||||||||||||||||||||    
T  19161857 tgtgccacaagagtaaattactcaaatgcctttcggcagttaactgccgaag-ttttagaaatccggctgcagttaactgccgaggaaaacctcg 19161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 19924689 - 19924787
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| || |||| |||    
T  19924689 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtaaactggc 19924786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 44621226 - 44621161
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    |||||||||||||||||||||||||||||| ||||||||||  || || ||||||| || ||||||    
T  44621226 tgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactgccaaagttttgagtaaaccg 44621161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 13633879 - 13633927
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||    
T  13633879 ccgaagtttgaaggaaaccggcggtagttaactgccgaggaaaacctcg 13633927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 45977806 - 45977717
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    ||||||| |||||||   |||||||||| | ||||||||||  || |||||||||| || |||||||||| ||| ||||||||||||||||    
T  45977806 tgtgccatacgagtactttacgaaaatgtcattcggcagttaactgccgaagtttt-agtaaaccggcgaaagtaaactgccgaggaaaac 45977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 19928887 - 19928826
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || |||||||||||||||| ||||||  |||||| ||||||| |||||||||    
T  19928887 cggcagttaactgccgaagtttttaggaagccggcggcagttaagtgccgagtaaaacctcg 19928826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 30195522 - 30195452
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtt 241  Q
    ||||||||||||| |||||| | |||||||| ||  ||||||||||||| |||  ||||||| ||||||||||    
T  30195522 gagaattgttgttcccacatttggtttggctatg--ccacacgagtaaattactcaaatgcccttcggcagtt 30195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 3983050 - 3983138
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  3983050 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 3983138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 31945971 - 31945883
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  31945971 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 31945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 44100942 - 44100813
Alignment:
Q  164 aacacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaa 263  Q
    |||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  44100942 aacatgagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatatgaaaatacccttcggcagtttgctaccgaagtttttaggaaa 44100845  T
Q  264 ccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||  ||||||||||||||||||||||||    
T  44100844 ccggcggcagttaactgccgaggaaaacctcg 44100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 5351867 - 5351747
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||| ||    
T  5351867 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggta 5351770  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  5351769 gttaactgccgaggaaaacctcg 5351747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 30493293 - 30493417
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||    
T  30493293 gagaattgctgttcccacatcttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaatcggc 30493390  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    | |||||||||||||||||||| ||||    
T  30493391 ggtagttaactgccgaggaaaatctcg 30493417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 41564627 - 41564507
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  41564627 attgttgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 41564530  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  41564529 gttaactgccgaggaaaacctcg 41564507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 169 - 285
Target Start/End: Complemental strand, 5355670 - 5355556
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  5355670 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggc 5355573  T
Q  269 gatagttaactgccgag 285  Q
    |  ||||||||||||||    
T  5355572 ggcagttaactgccgag 5355556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 7267583 - 7267459
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||    
T  7267583 gagaattgctgtttccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgctcatcggcagtttgctaccgaagtttttagggaaccggc 7267486  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||| ||||||| ||||    
T  7267485 ggcagttaactgccaaggaaaatctcg 7267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 43536036 - 43536160
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| |||||||||||||  ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||||| |    
T  43536036 gagaattgctgttcccacatcttgtttggctgtg--ccacacgagtaaaatacaaaaatgccgttcgacagtttgctaccgaagtttttaggcaaccgac 43536133  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    || ||||||||||||||||||||||||    
T  43536134 gacagttaactgccgaggaaaacctcg 43536160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 208948 - 209062
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||| ||    
T  208948 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggta 209045  T
Q  273 gttaactgccgaggaaa 289  Q
    |||||||||||||||||    
T  209046 gttaactgccgaggaaa 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 38950661 - 38950548
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    ||||||||| |||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||| |    
T  38950661 attgttgttcccacatgttgtttggctgtgt--cgcacgagtaaaatacgaaaatgcccttcggcagtttgctaccg-aggttttaggaaaccggcgaca 38950565  T
Q  273 gttaactgccgaggaaa 289  Q
    |||||||||||||||||    
T  38950564 gttaactgccgaggaaa 38950548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 18000170 - 18000290
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||| ||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  18000170 attgctgttcccacatgttgtttggttgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 18000267  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  18000268 gttaactgccgaggaaaacctcg 18000290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 15835350 - 15835237
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||  |||||||   ||||||||||||||||||||||||||||||||||||    
T  15835350 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatatcaaaatgctcctcggcagtttgctaccgaagtttttaggaaaccggc 15835253  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  15835252 ggcagttaactgccga 15835237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 17420502 - 17420626
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  17420502 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 17420599  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  |||||||||||||| ||| |||||    
T  17420600 ggcagttaactgccgagaaaatcctcg 17420626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 10619942 - 10620051
Alignment:
Q  178 tgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaa 277  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||| |||||  ||||||    
T  10619942 tgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaatcggcggcagttaa 10620039  T
Q  278 ctgccgaggaaa 289  Q
    ||||||||||||    
T  10620040 ctgccgaggaaa 10620051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 21998148 - 21998268
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||| ||||  ||||||||||||| |||  ||||||| ||||| |||||||| ||||||||||||||||||||||    
T  21998148 gagaattgatgttcccacatatagtttggttgtg--ccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaaccggc 21998245  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||||||||||    
T  21998246 ggcagttaactgccgaggaaaac 21998268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 42499687 - 42499799
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||| |||||||    
T  42499687 gagaattgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgccctttggcagtttgctaccgaggtttttagg-aaccggc 42499783  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  42499784 ggcagttaactgccga 42499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 3935768 - 3935876
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| |||||| | |||||||||||  ||||||||||||||||| |||||| | ||||||||||||||||||| ||||||||| ||||||||  |    
T  3935768 attgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgtccttcggcagtttgctaccgaggtttttagg-aaccggcggca 3935864  T
Q  273 gttaactgccga 284  Q
    ||||||||||||    
T  3935865 gttaactgccga 3935876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 17426537 - 17426425
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||||||| |||||| |  ||||||||||||||| || ||||||||| |||||||    
T  17426537 gagaattgttgttcccacatatagtttggctgtg--ccacacgagtaaaatacaaaaatgtccctcggcagtttgctactgaggtttttagg-aaccggc 17426441  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  17426440 ggcagttaactgccga 17426425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 22003537 - 22003416
Alignment:
Q  172 aattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgat 271  Q
    ||||| |||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||| |||   || |||||||||||||||||||||||      
T  22003537 aattgctgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggc 22003440  T
Q  272 agttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||||||||||||    
T  22003439 agttaactgccgaggaaaacctcg 22003416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 43619281 - 43619163
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||| ||   ||||||| ||||||||||  || ||||||||||||| ||||||||    
T  43619281 gagaattgctgttcccacatttggtttggctgtg--ccacacgagtaaattaatcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 43619184  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  ||||||||||||||||||    
T  43619183 ggcagttaactgccgaggaaa 43619163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 28468575 - 28468699
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||| | | |||||||||||  |||||||||||||||||| |||| || ||||  |||   || ||||||||| | ||||||||||    
T  28468575 gagaattgttgttcccacgtatagtttggctgtg--ccacacgagtaaaatacgcaaatacccttcgatagtaaactgccgaagtttgttggaaaccggc 28468672  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  28468673 ggcagttaactgccgaggaaaacctcg 28468699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 15831061 - 15831159
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||||||||| || ||||||||||  |||||||||||| |||  |||||||    
T  15831061 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatacgaaaattcccttcggcagttaactaccgaagtttgtagtgaaccggc 15831158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 20937832 - 20937930
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||||||||  || ||||||||||||| ||||||||    
T  20937832 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 20937929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 45428550 - 45428670
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| |  | |||||||||  ||||||||||||||||| |||| || ||||| |||   || | ||||||||||||||||||||    
T  45428550 gagaattgttgttcccacatataatatggctgtgt--cacacgagtaaaatacggaaatacccttcggtagtaaactgctgaagtttttaggaaaccggc 45428647  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||| ||||||    
T  45428648 ggcagttaactgccgaagaaaac 45428670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 30497088 - 30496990
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  |||||||    
T  30497088 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggc 30496991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 43312666 - 43312783
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | ||||||||||   |||||||| ||   |||||||||||| |||||||||   || ||||||||||||| ||||| ||    
T  43312666 gagaattgttgttcccacatttggtttggctgta--ccacacgaatattttacgaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccagc 43312763  T
Q  269 gatagttaactgccgaggaa 288  Q
    |  |||||||||||||||||    
T  43312764 ggcagttaactgccgaggaa 43312783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 43984474 - 43984382
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaa 262  Q
    |||| |||| |||| |||||| | |||||||||||  ||||| ||||||||||| |||||| |  |||||||||||||||||| |||||||||||    
T  43984474 cgagtattgctgttcccacatatagtttggctgtg--ccacatgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaa 43984382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 3940869 - 3940770
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| ||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  ||||||    
T  3940869 cgagtattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccgg 3940772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 42505901 - 42505803
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| ||||| || ||||||||||  || |||||||||| || ||||||||    
T  42505901 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagttttgagtaaaccggc 42505804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 26543238 - 26543355
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  |||||||||||   |||||||||| | ||||||| |   ||  |||||||||||| ||||||||    
T  26543238 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtactttacgaaaatgtccttcggcactaaactgtcgaagtttttagtaaaccggc 26543335  T
Q  269 gatagttaactgccgaggaa 288  Q
    |  ||||||||||| |||||    
T  26543336 ggcagttaactgccaaggaa 26543355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 43978500 - 43978568
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  ||||||||    
T  43978500 tgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggcg 43978568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 28419372 - 28419461
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   |||  ||||||| ||||||||||  || |||||||||| || ||||||||| ||||||||| |||||||||||    
T  28419372 tgtgccacacgagtattttacctaaatgcccttcggcagttaactgccgaagtttt-agtaaaccggcggtagttaactaccgaggaaaac 28419461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 41273356 - 41273267
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   || ||||||||| ||||||||||  || |||||| |||||| ||| |||||  ||||||||||||||||||||    
T  41273356 tgtgccacacgagtactttatgaaaatgcccttcggcagttaactgccgaag-ttttagtaaatcggcggcagttaactgccgaggaaaac 41273267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 39793897 - 39793995
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||  |||||||| ||||||||||  || |||||||||| |  ||||||||    
T  39793897 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagttttgattaaaccggc 39793994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 39800791 - 39800693
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||  |||||||| ||||||||||  || |||||||||| |  ||||||||    
T  39800791 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagttttgattaaaccggc 39800694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 42499783 - 42499844
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  42499783 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 42499844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 5351928 - 5351996
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||| ||||||  || |||||||||| ||  ||||||||    
T  5351928 tgtgccacacgagtaaaataccaaaatgcccttctgcagttaactgccgaagttttgagtgaaccggcg 5351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 7185020 - 7185107
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaa 289  Q
    ||||||| |||||||   || ||||||||| ||||||||||  || ||||| ||||||| |||||||||| ||| ||||||||||||||    
T  7185020 tgtgccaaacgagtactttatgaaaatgcccttcggcagttaactgccgaa-tttttagtaaaccggcgacagtaaactgccgaggaaa 7185107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 10424773 - 10424893
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    ||||||||| |||| |||||| | |||||||||||  ||||||||||||| |||  |||||||  || ||||||  || |||||| |||||| ||  |||    
T  10424773 cgagaattgctgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccctcagcagttaactgccgaag-ttttagaaatacgg 10424869  T
Q  268 cgatagttaactgccgaggaaaac 291  Q
    | | ||||||||||||||||||||    
T  10424870 ctacagttaactgccgaggaaaac 10424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 17426441 - 17426381
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctc 294  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| ||||||||||||||||    
T  17426441 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctc 17426381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 39947534 - 39947653
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||| ||||||  |||||||||||   ||||||||| || ||||| |||   ||  ||||||||| || ||||||||    
T  39947534 gagaattgttgttcccacatttggttttgctgtg--ccacacgagtactttacgaaaatacccttcggtagtaaactgtcgaagtttt-agtaaaccggc 39947630  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||||||||||    
T  39947631 ggcagttaactgccgaggaaaac 39947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 43984363 - 43984316
Alignment:
Q  248 cgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||| |||||||  |||||| |||||||||||||||||    
T  43984363 cgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 43984316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 44100666 - 44100744
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaact 279  Q
    ||||||||| ||||||  |||| ||||||| ||||| |||   || |||||||||||||||||||||||  ||||||||    
T  44100666 tgtgccacatgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaact 44100744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 213562 - 213474
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  213562 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 213474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 10624575 - 10624487
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  10624575 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 10624487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 29074141 - 29074056
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttt 256  Q
    ||||||||||||| |||||| | |||||| ||||  ||||||||||||| |||  |||||||  |||||||||  || ||||||||||    
T  29074141 gagaattgttgttcccacatttggtttggttgtg--ccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagtttt 29074056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 30803153 - 30803037
Alignment:
Q  172 aattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgat 271  Q
    |||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||| |  |||||||||  || |||||||||| || ||  ||||       
T  30803153 aattgttgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagtttt-agaaatacggctgc 30803057  T
Q  272 agttaactgccgaggaaaac 291  Q
    ||||||||||||||||||||    
T  30803056 agttaactgccgaggaaaac 30803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 28238073 - 28238197
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28238073 gagaattgctcttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 28238170  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  28238171 ggcagttaactgccgaggaaaacctcg 28238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 28876580 - 28876701
Alignment:
Q  172 aattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgat 271  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||      
T  28876580 aattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaaccggcggc 28876677  T
Q  272 agttaactgccgaggaaaacctcg 295  Q
    |||||||| |||||||||||||||    
T  28876678 agttaactcccgaggaaaacctcg 28876701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 14281035 - 14280915
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| |||||||||||||||||||||  |||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  14281035 attgctgttcccacatgttgtttggctgtgt--cacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 14280938  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  14280937 gttaactgccgaggaaaacctcg 14280915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 293
Target Start/End: Original strand, 37814516 - 37814638
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || |||||||||||||||||||| | ||||| ||||||||    
T  37814516 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacaaaaatacccttcggcagtttgctaccgaaatatttagtaaaccggc 37814613  T
Q  269 gatagttaactgccgaggaaaacct 293  Q
    |  ||||||||||||||||||||||    
T  37814614 ggcagttaactgccgaggaaaacct 37814638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 472373 - 472282
Alignment:
Q  77 ttggtacatgttattgtnnnnnnntgacaatcattattgaagagagattagttgaacatttggagaagaaaataacgataacaatggaacac 168  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  472373 ttggtacatgttattgtaaaaaaatgacaatcattattgaagagagattagttgaacatttggagaagaaaataacgataacaatggaacac 472282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 8580588 - 8580499
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaa 290  Q
    ||||||||||||||||| |||  ||||||| ||||| |||||||| ||||||||||||||||| |||||  |||||||||||||||||||    
T  8580588 tgtgccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaatcggcggcagttaactgccgaggaaaa 8580499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 19035139 - 19035251
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | ||||| |||||  ||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  19035139 gagaattgctgttcccacatatagtttgactgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 19035235  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  19035236 ggcagttaactgccga 19035251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 19041256 - 19041132
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| ||||||   ||||||||||||||||||||||||| | |||| ||||    
T  19041256 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagttttaacgaaatcggc 19041159  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||| ||||||| ||||||||||    
T  19041158 ggcagttagctgccgaagaaaacctcg 19041132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 13837658 - 13837782
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| |  ||||||||||  |||||||||||   ||| |||||||| |||||||||   || ||||||||||||| ||||||||    
T  13837658 gagaattgctgttcccacatttgctttggctgtg--ccacacgagtactttacaaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccggc 13837755  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  13837756 ggcagttaactgccgaggaaaacctcg 13837782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 27659874 - 27659998
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||| |||   || |||||||||||||||||||| |    
T  27659874 gagaattgctgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccgac 27659971  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |   |||||||||||||||||||||||    
T  27659972 ggcggttaactgccgaggaaaacctcg 27659998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 11027029 - 11027127
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| || ||||||||    
T  11027029 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttaagtaaaccggc 11027126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 8574617 - 8574735
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||   |||||||||||| |||  ||||||| ||||| |||   || |||||||||||||||||| |||    
T  8574617 gagaattgttgttcccacatttggtttggctgtg---cacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaactggc 8574713  T
Q  269 gatagttaactgccgaggaaaa 290  Q
    |  ||||||||| |||||||||    
T  8574714 ggcagttaactgtcgaggaaaa 8574735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 30711266 - 30711174
Alignment:
Q  203 tgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||| |||||| |||| ||||||   |||||||||  || ||||||||||||||||  |||||  ||||||||||||||||||||||||    
T  30711266 tgccacacaagtaaattacgcaaatgctcctcggcagttaactgccgaagtttttaggaagtcggcggcagttaactgccgaggaaaacctcg 30711174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 38853443 - 38853508
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| || ||||||    
T  38853443 tgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtaaaccg 38853508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 38860307 - 38860237
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtt 241  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||    
T  38860307 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagtt 38860237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 8574761 - 8574800
Alignment:
Q  251 agtttttaggaaaccggcgatagttaactgccgaggaaaa 290  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8574761 agtttttaggaaaccggcggtagttaactgccgaggaaaa 8574800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 14279813 - 14279903
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaa 290  Q
    |||||||||| |||||  |||| |||| || | |||||||||  ||||||| ||||||||||||||||||  |||||||| ||||||||||    
T  14279813 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactaccgaggtttttaggaaaccggcggcagttaactcccgaggaaaa 14279903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 30705101 - 30705187
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    |||||||||||||| |  |||| ||||||| ||| ||||||  || ||||||||||||| |||||||||  |||||||| |||||||    
T  30705101 tgtgccacacgagtcatttacgtaaatgcccttcagcagttaactgccgaagtttttagtaaaccggcggcagttaactaccgagga 30705187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 38855788 - 38855726
Alignment:
Q  233 tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||  || |||||||||  ||||||||||||  ||||||||||||||||||||||||    
T  38855788 tcggcagttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcg 38855726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 11033601 - 11033503
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||| ||||||||||| |||||| | ||||||||||  || |||||||||| || ||||||||    
T  11033601 gagaattgctgttcccacatatagtatggctgtg--ccacatgagtaaaataccaaaatgtccttcggcagttaactgccgaagttttgagtaaaccggc 11033504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 28241938 - 28241840
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||  ||||| || ||||||||||  || |||||||||| ||  |||||||    
T  28241938 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatatcaaaatacccttcggcagttaactgccgaagttttgagtgaaccggc 28241841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 19035235 - 19035296
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || |||||||| |||||| |||||||  |||||| |||||||||||||||||    
T  19035235 cggcagttaactgccgaagttcttaggacaccggcggcagttaagtgccgaggaaaacctcg 19035296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 14771 - 14684
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaa 289  Q
    ||||||||||||||||| |||  ||||| | ||||||||||  || |||||| |||||| ||  ||||  |||||||||||||||||||    
T  14771 tgtgccacacgagtaaattactcaaatgtccttcggcagttaactgccgaag-ttttagaaatacggctgtagttaactgccgaggaaa 14684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 31425457 - 31425333
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  31425457 gagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggcaaccggc 31425360  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  31425359 ggcagttaactgccgaggaaaacctcg 31425333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 37562999 - 37563123
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37562999 gagaattgctgttcccacatgttgtttggctgtgt--cacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 37563096  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  | ||||||||||||||||||||||    
T  37563097 ggcaattaactgccgaggaaaacctcg 37563123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 49169238 - 49169112
Alignment:
Q  167 acgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    |||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  49169238 acgagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccg 49169141  T
Q  267 gcgatagttaactgccgaggaaaacctcg 295  Q
    |||  ||||||||||||||||| ||||||    
T  49169140 gcggcagttaactgccgaggaatacctcg 49169112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 1089725 - 1089599
Alignment:
Q  167 acgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    ||||||||||||||| |||||| | || ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1089725 acgagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccg 1089628  T
Q  267 gcgatagttaactgccgaggaaaacctcg 295  Q
    |||  |||||| |||||||||||||||||    
T  1089627 gcggcagttaaatgccgaggaaaacctcg 1089599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 54633746 - 54633866
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  54633746 gagaattgctgttcccacatgttgtttgactgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaaggttttaggaaaccggc 54633843  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||||||||||    
T  54633844 ggcagttaactgccgaggaaaac 54633866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 40358405 - 40358295
Alignment:
Q  183 ccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgcc 282  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||    
T  40358405 ccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcgacagtttgctaccgaagttttttggaaaccggcggcagttaactgcc 40358308  T
Q  283 gaggaaaacctcg 295  Q
    |||||||||||||    
T  40358307 gaggaaaacctcg 40358295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 49563778 - 49563898
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  49563778 attgatgtttgcacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 49563875  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  49563876 gttaactgccgaggaaaacctcg 49563898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 30723055 - 30723173
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |    
T  30723055 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggtagtttgctaccgaagtttttaggaaaccgac 30723152  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  | ||||||||||||||||    
T  30723153 ggcaattaactgccgaggaaa 30723173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 1087794 - 1087912
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  1087794 gagaattgctgttcccacatatagtatggctgtg--ccacatcagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaatcggc 1087891  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  ||||||||||||||||||    
T  1087892 ggcagttaactgccgaggaaa 1087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 41801076 - 41800952
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || |||||||||  |||||||||||||||  |||||| | ||||||||||||||||||||||||| |||||||||||    
T  41801076 gagaattgctgttcccacatatagtatggctgtgt--cacacgagtaaaatattaaaatgtcattcggcagtttgctaccgaagttttaaggaaaccggc 41800979  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||| ||||||| ||||||||||    
T  41800978 ggcagttagctgccgaagaaaacctcg 41800952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 26792383 - 26792259
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||||| ||  || ||||||||||||| ||||||||    
T  26792383 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccttcggcaattaactgccgaagtttttagtaaaccggc 26792286  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||| ||||    
T  26792285 ggcagttaactgccgaggaaaatctcg 26792259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 55799699 - 55799589
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||   |  |||||||||||||| |||||||||||| ||||    
T  55799699 gagaattgttgttcccacatgttgtttggc--tgtgccacacgagtaaaataccaaaatgcc---cctcagtttgctaccgaggtttttaggaaatcggc 55799605  T
Q  269 gatagttaactgccga 284  Q
    |  ||||||| |||||    
T  55799604 ggcagttaacagccga 55799589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 49096490 - 49096378
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||| ||||  ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||| |||    
T  49096490 gagaattgctgttcccacatatagtttggttgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttagg-aactggc 49096394  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  49096393 ggcagttaactgccga 49096378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 54634154 - 54634030
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  54634154 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 54634057  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  54634056 ggcagttaactgccgaggaaaacctcg 54634030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 31242180 - 31242268
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaa 289  Q
    ||||||||||||||||| |||  ||||||| ||||||||||  || ||||||||||||| |||||||||  ||||||||||||||||||    
T  31242180 tgtgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaa 31242268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 41793265 - 41793377
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||| ||||||||||||| ||||||||  |||||||||||||||||| ||||||| |||||||||    
T  41793265 gagaattgctgttcccacatatagtttggctgtg--ccatacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggttttta-gaaaccggc 41793361  T
Q  269 gatagttaactgccga 284  Q
    |  | |||||||||||    
T  41793362 ggcaattaactgccga 41793377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 26932518 - 26932642
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | ||||||||||||  |||||||||||| |||  ||||| | ||||| |||   || |||||||||||||  |||||||    
T  26932518 gagaattgctgttcccacatatagtttggctgtgt--cacacgagtaaattactcaaatgtccttcggtagtaaactgccgaagtttttagacaaccggc 26932615  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    | |||||||||||||||||||||||||    
T  26932616 ggtagttaactgccgaggaaaacctcg 26932642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 52529147 - 52529271
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||| ||||    
T  52529147 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaatcggc 52529244  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  52529245 ggcagttaactgccgaggaaaacctcg 52529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 6175785 - 6175872
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaa 262  Q
    ||||||||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| |||||| ||||    
T  6175785 attgttgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttgggaa 6175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 30726850 - 30726756
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||| ||||| | ||||| |||   || ||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  30726850 tgtgccacacgagtaaaatacggaaatgtccttcggtagtaaactgccgaaatttttaggaaaccggcagcagttaactgccgaggaaaacctcg 30726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 37563389 - 37563295
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||||  |||| ||||||| ||||| |||   ||  ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37563389 tgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcg 37563295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 13182237 - 13182139
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||||||||||||||  ||  ||||||||| || ||||||||    
T  13182237 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcctttcggcagttaactgtcgaagttttgagtaaaccggc 13182140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 31421670 - 31421756
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    |||||||||| ||||||||||||||||||| ||||||||||  || |||||||||||||  ||||||||  || ||||| |||||||    
T  31421670 tgtgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttagtgaaccggcggcagctaactaccgagga 31421756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 39773368 - 39773462
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||||  |||| ||||| | ||||| |||   || ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  39773368 tgtgccacacgagtaagttacggaaatgtccttcggtagtaaactgccgaagtttttaggaaaccggcagcagttaactgccgaggaaaacctcg 39773462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 6181930 - 6181832
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  |||||||    
T  6181930 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggc 6181833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 49090377 - 49090479
Alignment:
Q  165 acacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaac 264  Q
    |||||||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  |||    
T  49090377 acacgagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaac 49090474  T
Q  265 cggcg 269  Q
    |||||    
T  49090475 cggcg 49090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 1309223 - 1309155
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| || |||||||||    
T  1309223 tgtgccacacgagtaaaatacaaaaatgcccttcggcagttaactgccgaagttttgagtaaaccggcg 1309155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 40352300 - 40352397
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||| ||||  |||||||||||||||||||||||||  ||||| |||   || ||||||||||||||||||||||    
T  40352300 gagaattgttgttcccacatatagtatggttgtg--ccacacgagtaaaatacgaaaatgctcttcggtagtaaactgccgaagtttttaggaaaccggc 40352397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 16473788 - 16473699
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   |||||||||||| ||||||||||  || |||||| |||||| |||||||||  |||||||| |||||||||||    
T  16473788 tgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaag-ttttagtaaaccggcggcagttaactaccgaggaaaac 16473699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 28235665 - 28235580
Alignment:
Q  205 ccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||   |||||||||||| ||||||||||  || |||||||||| || |||||||||  ||||||||||||||||||||    
T  28235665 ccacacgagtattttacgaaaatgcccttcggcagttaactgccgaagtttt-agtaaaccggcggcagttaactgccgaggaaaac 28235580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 49165025 - 49165079
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagttt 255  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||| ||||||||    
T  49165025 tgtgccacacgagtaaaatacgaaaatgcctttccgcagttaactatcgaagttt 49165079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 9893373 - 9893305
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    |||||||||| ||||||||||||||||||| ||||||||||  || | ||||||||||| ||| |||||    
T  9893373 tgtgccacacaagtaaaatacgaaaatgcccttcggcagttaactgctgaagtttttagtaaatcggcg 9893305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 3408379 - 3408255
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||| |||   ||||||||||||| |||  ||||||| |||| ||||   || ||||| |||||  | |||||||    
T  3408379 gagaattgttgttcccacatttggtttggttgta--ccacacgagtaaattactcaaatgcccttcgacagtaaactgccgaaatttttgtgcaaccggc 3408282  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  3408281 ggcagttaactgccgaggaaaacctcg 3408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 21023026 - 21022903
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||| |||  |||||||  |||||||||  || |||||||||| || ||  ||||    
T  21023026 gagaattgctgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagtttt-agaaatacggc 21022930  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
       ||||||||||||||||||||||||    
T  21022929 tgcagttaactgccgaggaaaacctcg 21022903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 13173168 - 13173266
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| |||| |||||  || |||||||||| |  ||||||||    
T  13173168 gagaattgatgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcgacagttaactgccgaagttttgattaaaccggc 13173265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 39773680 - 39773630
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatac 221  Q
    |||||||| |||| ||||||||||||||||  |||||||||||||||||||||    
T  39773680 gagaattgctgttcccacatgttgtttggc--tgtgccacacgagtaaaatac 39773630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 41793374 - 41793422
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  41793374 ccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 41793422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 49566559 - 49566469
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaa 290  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||||    
T  49566559 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaaaa 49566469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 55587293 - 55587409
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||| ||  ||||||||||||  |||  ||||||| ||||||||||  || |||||    ||| |||||||||    
T  55587293 gagaattgttgttcccacatttggtttggctatg--ccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa----ttatgaaaccggc 55587386  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  55587387 tgcagttaactgccgaggaaaac 55587409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 56565722 - 56565815
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   ||||||||| |  ||| ||||||  ||  ||||||||| || |||||||||  ||||||||||||||||||||||||    
T  56565722 tgtgccacacgagtagtttacgaaaattctcttcagcagttaactgtcgaagtttt-agtaaaccggcggcagttaactgccgaggaaaacctcg 56565815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 6175874 - 6175935
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||| ||||||||||||    
T  6175874 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccaaggaaaacctcg 6175935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 51037606 - 51037521
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttt 256  Q
    ||||||||||||| |||||| | |||||||  ||||||||||||||||| |||  ||||| |  |||||||||  || ||||||||||    
T  51037606 gagaattgttgttcccacatttagtttggc--tgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagtttt 51037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 55799592 - 55799544
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||| ||||||  |||||| ||||||| |||||||||    
T  55799592 ccgaagtttttaggaatccggcggcagttaagtgccgagtaaaacctcg 55799544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 3502034 - 3501910
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3502034 gagaattgttgttcccacatgttgtttggttgtg--ccacacgagtaaaatacgaaactgcccttcggcagtttgctaccgaagtttttaggaaaccggc 3501937  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  3501936 ggcagttaactgccgaggaaaacctcg 3501910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 46697645 - 46697769
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  46697645 gagaattgctgttcccacatcttgtttggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggc 46697742  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  46697743 ggcagttaactgccgaggaaaacctcg 46697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 41844083 - 41844207
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41844083 gagaattgctcttcccacatgttgtttggctgtg--ccacacgagtaaaatacaaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 41844180  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  |||||||||| |||||||||||||    
T  41844181 ggcagttaactgctgaggaaaacctcg 41844207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 1835436 - 1835342
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  1835436 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcggcagttaactgccgagaaaaacctcg 1835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 2858096 - 2857979
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||    
T  2858096 cgagaattgttgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaacgcccttcggcagtttgctaccgaagtatttagtaaaccgg 2857999  T
Q  268 cgatagttaactgccgagga 287  Q
    ||  ||||||||||||||||    
T  2857998 cggcagttaactgccgagga 2857979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 35743719 - 35743597
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||    
T  35743719 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatacgaaaatgccattcggcagtttgctaccgaag--tttaggaaatcggc 35743624  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  35743623 ggcagttaactgccgaggaaaacctcg 35743597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 3953350 - 3953230
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  3953350 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 3953253  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  3953252 gttaactgccgaggaaaacctcg 3953230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 9426565 - 9426683
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||| |||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9426565 gagaattgctgttcccacatgttgtttggttgta--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 9426662  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  |||||| |||||||||||    
T  9426663 ggcagttaaatgccgaggaaa 9426683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 6745461 - 6745341
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||  |    
T  6745461 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggca 6745364  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||| ||||||||||||    
T  6745363 gttaactgccaaggaaaacctcg 6745341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 8156446 - 8156566
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| ||||| || || |||||||||||||||| ||||||||||||||||||  |    
T  8156446 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaataccctttggcagtttgctaccgaggtttttaggaaaccggcggca 8156543  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  8156544 gttaactgccgaggaaaacctcg 8156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 50477114 - 50477238
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| ||||||| |||||  ||||| |||||||||||||||||| | |||| |||||||||||||||||||||||| |||||||    
T  50477114 gagaattgttgttcccacatcttgtttgactgtg--ccacatgagtaaaatacgaaaatgtcattcgacagtttgctaccgaagtttttaggcaaccggc 50477211  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  50477212 ggcagttaactgccgaggaaaacctcg 50477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 49144598 - 49144471
Alignment:
Q  166 cacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaacc 265  Q
    ||||||||||| |||| |||||| | || |||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  49144598 cacgagaattgctgttcccacatatagtatggctgtgt--cacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaacc 49144501  T
Q  266 ggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||  ||||||||||||| ||||||||||    
T  49144500 ggcggcagttaactgccgaagaaaacctcg 49144471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 2968064 - 2967940
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  2968064 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggc 2967967  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||| ||||||| ||||||||||    
T  2967966 ggcagttagctgccgaagaaaacctcg 2967940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 54392163 - 54392043
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||| |||||||  |    
T  54392163 attgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggacaccggcggca 54392066  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    ||||| |||||||||||||||||    
T  54392065 gttaagtgccgaggaaaacctcg 54392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 30943127 - 30943247
Alignment:
Q  173 attgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgata 272  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||||| |||||  | |||| ||||||||||  || ||||||||||||| ||||  |    
T  30943127 attgctgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatatccttcgacagtttgctattgaggtttttaggaaactggcggca 30943224  T
Q  273 gttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||||||||||    
T  30943225 gttaactgccgaggaaaacctcg 30943247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 42900111 - 42900224
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||| ||||||||||  || | |||||||| || ||||||||    
T  42900111 gagagttgttgttcccacatgttgtttggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgctgaagttttgagtaaaccggc 42900208  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  42900209 ggcagttaactgccga 42900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 46406763 - 46406651
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | ||||||||||||  |||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  46406763 gagaattgctgttcccacatatagtttggctgtgt--cacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 46406667  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  46406666 ggcagttaactgccga 46406651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 41844505 - 41844379
Alignment:
Q  167 acgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccg 266  Q
    ||||||||||||||| | |||| | || ||||||||  ||||||||||||  |||| ||||||||||||| |||    | ||||||||||||||||||||    
T  41844505 acgagaattgttgttcctacatatggtatggctgtg--ccacacgagtaagttacggaaatgcctttcggtagtaaattgccgaagtttttaggaaaccg 41844408  T
Q  267 gcgatagttaactgccgaggaaaacctcg 295  Q
    |||  ||||||||||||||||||||||||    
T  41844407 gcggcagttaactgccgaggaaaacctcg 41844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 34051485 - 34051373
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  34051485 gagaattgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 34051389  T
Q  269 gatagttaactgccga 284  Q
       |||||||||||||    
T  34051388 agcagttaactgccga 34051373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 49138515 - 49138627
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||| ||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  49138515 gagaattgctgttcccacatatagtttggctgtg--ccacatgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 49138611  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  49138612 ggcagttaactgccga 49138627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 25191855 - 25191935
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaa 251  Q
    |||||||| | || |||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25191855 gagaattgctcttcccacatgttgttcggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaa 25191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 29008820 - 29008940
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||||||||  |||||||||||||||||||||||||| ||||||||||  |||||||||||| |||  |||||||    
T  29008820 gagaattgttgttcccacatatagtatggctgtg--ccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagtttgtagtgaaccggc 29008917  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  || | ||| |||||||||||    
T  29008918 ggcagcttactaccgaggaaaac 29008940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 2950267 - 2950379
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||| |||||  |||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  2950267 gagaattgctgttcccacatatagtttggttgtgt--cacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 2950363  T
Q  269 gatagttaactgccga 284  Q
    |  ||||| |||||||    
T  2950364 ggcagttacctgccga 2950379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 1835084 - 1835204
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||||||||    
T  1835084 gagaattgctgttcccacatatggtatggctgtg--ccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 1835181  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||||||||||||||||||||    
T  1835182 ggcagttaactgccgaggaaaac 1835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 3975666 - 3975784
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||  |||||| | |||||||||||  |||||||||||   |||||||||||| |||||||||   ||  |||||||||||| ||||||||    
T  3975666 gagaattgttgtacccacatttggtttggctgtg--ccacacgagtactttacgaaaatgcccttcggcagtaaactgtcgaagtttttagtaaaccggc 3975763  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  ||||||||||||||||||    
T  3975764 ggcagttaactgccgaggaaa 3975784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 42904321 - 42904205
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  |||||| ||||||||||||||||||| ||||||||||  || |||||||||||||  |||||||    
T  42904321 gagaattgctgttcccacatatagtatggctgtg--ccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttagtgaaccggc 42904224  T
Q  269 gatagttaactgccgagga 287  Q
    |  || ||||| |||||||    
T  42904223 ggcagctaactcccgagga 42904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 4015237 - 4015144
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||| ||||||||||   |||||||||||| ||||||||||  || |||||||||| || |||||||||  ||||||||||||||||||||||||    
T  4015237 tgtgtcacacgagtactttacgaaaatgcccttcggcagttaactgccgaagtttt-agtaaaccggcgggagttaactgccgaggaaaacctcg 4015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 8475791 - 8475884
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   |||||||||| | ||||||||||  || |||||||||| || |||||||||  ||||||||||||||||||||||||    
T  8475791 tgtgccacacgagtactttacgaaaatgtccttcggcagttaactgccgaagtttt-agtaaaccggcggcagttaactgccgaggaaaacctcg 8475884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 42165128 - 42165221
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   |||||||||||| |||||||||| ||| | |||| |||||| |||||||||  |||||| |||||||||||||||||    
T  42165128 tgtgccacacgagtattttacgaaaatgcccttcggcagttagctgctgaag-ttttagtaaaccggcggcagttaattgccgaggaaaacctcg 42165221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 295
Target Start/End: Original strand, 2645422 - 2645514
Alignment:
Q  203 tgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||| |||||| |||  ||||| |  |||||||||  || |||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  2645422 tgccacacaagtaaattacacaaatgtccctcggcagttaactgccgaagtttttaggaaaccggcggcagttaacagccgaggaaaacctcg 2645514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 16444572 - 16444640
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||| || |||||||||    
T  16444572 tgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtaaaccggcg 16444640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 34045342 - 34045462
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  |||||||    
T  34045342 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggc 34045439  T
Q  269 gatagttaactgccgaggaaaac 291  Q
    |  ||  |||| |||||||||||    
T  34045440 ggcagcaaactaccgaggaaaac 34045462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 50481492 - 50481406
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgagga 287  Q
    |||||||||| ||||||||||||||||||| ||||||||||   | |||||||||||||  ||||||||  || ||||| |||||||    
T  50481492 tgtgccacaccagtaaaatacgaaaatgcccttcggcagttaagtgccgaagtttttagtgaaccggcggcagctaactaccgagga 50481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 46388892 - 46388990
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||  || |||||||||| ||  |||||||    
T  46388892 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtgaaccggc 46388989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 35743429 - 35743473
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  35743429 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaac 35743473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 3493523 - 3493647
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||||| || |||||| | |||||||||||  ||||||||||||| |||  |||||    ||| |||||  || |||||||||||| |||||||||    
T  3493523 gagaattgttcttcccacatttagtttggctgtg--ccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaaccggc 3493620  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  |||||||||| ||| |||||||||    
T  3493621 ggcagttaactgcagagaaaaacctcg 3493647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 3497217 - 3497341
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||||| || |||||| | |||||||||||  ||||||||||||| |||  |||||    ||| |||||  || |||||||||||| |||||||||    
T  3497217 gagaattgttcttcccacatttagtttggctgtg--ccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaaccggc 3497314  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  |||||||||| ||| |||||||||    
T  3497315 ggcagttaactgcagagaaaaacctcg 3497341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 2950363 - 2950424
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  2950363 cggcagttacctgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 2950424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 46406667 - 46406606
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  46406667 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 46406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 49138611 - 49138672
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  49138611 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 49138672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 54386097 - 54386166
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatg-cctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||| |||||||||||||  || |||||||||| ||  ||||||||    
T  54386097 tgtgccacacgagtaaaataccaaaatgccctttcggcagttaactgccgaagttttgagtgaaccggcg 54386166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 1293359 - 1293435
Alignment:
Q  219 tacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||| |||||||||   ||  |||||||||||  |||| ||||  ||||||||||||||||||||||||    
T  1293359 tacgaaaatgcccttcggcagtaaactgtcgaagtttttaataaactggcggcagttaactgccgaggaaaacctcg 1293435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 34051376 - 34051328
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  34051376 ccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 34051328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 27739705 - 27739586
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||| | | |||||||||||  ||||||||||||| |||  |||| || ||||||||||  || |||||||||| || ||  ||||    
T  27739705 gagaattgttgttcccacttttggtttggctgtg--ccacacgagtaaattactcaaatacccttcggcagttaactgccgaagtttt-agaaatacggc 27739609  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  27739608 tgcagttaactgccgaggaaaac 27739586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 4331928 - 4331839
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   |||||||||  | ||||||||||  || |||||| |||||| |||||||||  |||||||||| |||||||||    
T  4331928 tgtgccacacgagtactttacgaaaatatccttcggcagttaactgccgaag-ttttagtaaaccggcggcagttaactgctgaggaaaac 4331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 42166518 - 42166429
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||||||||||||||   ||| |||||| | ||||||||||  || |||||||||| || |||||||||  ||| ||||||||||||||||    
T  42166518 tgtgccacacgagtactttacaaaaatgtcattcggcagttaactgccgaagtttt-agtaaaccggcggcagtaaactgccgaggaaaac 42166429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 8161079 - 8160994
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcc-tttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgag 285  Q
    |||||||||| |||||  |||| |||| || |||||||||||  || |||| ||||||||| ||||||||  ||||||||||||||    
T  8161079 tgtgccacaccagtaatttacgcaaataccctttcggcagttaactgccgaggtttttaggcaaccggcggcagttaactgccgag 8160994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 3948692 - 3948780
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  || | |||| |||| |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  3948692 tgtgccacaccagtaatttatgcaaataccttctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 3948780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 16611088 - 16611147
Alignment:
Q  224 aaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||| ||||||||||  ||||||||| |||||| |||||||||  |||||||||||||    
T  16611088 aaatgcccttcggcagttaactaccgaag-ttttagaaaaccggcggcagttaactgccga 16611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 22048165 - 22048106
Alignment:
Q  224 aaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||| ||||||||||  ||||||||| |||||| |||||||||  |||||||||||||    
T  22048165 aaatgcccttcggcagttaactaccgaag-ttttagaaaaccggcggcagttaactgccga 22048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 30947763 - 30947675
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctt-tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaa 288  Q
    |||||||||| |||||  |||| |||| || | |||||||||  || |||| ||||||||||||||||||  |||||||| ||||||||    
T  30947763 tgtgccacaccagtaatttacgcaaataccctctcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaa 30947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 46702134 - 46702066
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcg 269  Q
    ||||||||||||||||||||| |||||| | ||| ||||||  || |||||||||| ||  ||||||||    
T  46702134 tgtgccacacgagtaaaataccaaaatgtccttcagcagttaactgccgaagttttgagtgaaccggcg 46702066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 50998818 - 50998733
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttt 256  Q
    ||||||||||||| || ||| | |||||||||||  ||||||||||||| |||  |||||||  |||||||||  || ||||||||||    
T  50998818 gagaattgttgttcccgcatttggtttggctgtg--ccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagtttt 50998733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 26712360 - 26712238
Alignment:
Q  171 gaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcga 270  Q
    |||||| |||| ||||||||||||| ||||||  |||||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||     
T  26712360 gaattgatgttcccacatgttgtttagctgtg--ccacacgagtaaaatatgaaaatacccttcggcagtttgctaacgaagtttttaggaaaccggcgg 26712263  T
Q  271 tagttaactgccgaggaaaacctcg 295  Q
     ||||||||||||||||||||||||    
T  26712262 cagttaactgccgaggaaaacctcg 26712238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 30825984 - 30826102
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  ||||||||||||||||  |||||||  ||||||||||||||||||||||||||||| |||||||    
T  30825984 gagaattgctgttcccacatgttgtttggctgtg--ccacacgagtaaaatataaaaatgctcttcggcagtttgctaccgaagtttttaggcaaccggc 30826081  T
Q  269 gatagttaactgccgaggaaa 289  Q
    |  ||||||||||||||||||    
T  30826082 ggcagttaactgccgaggaaa 30826102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 18351782 - 18351658
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| ||||  |||||||||||||||||||  ||||||||||||||||| ||||||   ||||||||||||||||||||| ||||||||||||||     
T  18351782 gagaattgctgttctcacatgttgtttggctgtg--ccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagattttaggaaaccggt 18351685  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  18351684 ggcagttaactgccgaggaaaacctcg 18351658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 27616649 - 27616773
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  27616649 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggc 27616746  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||| ||||||||||    
T  27616747 ggcagttaactgccgaagaaaacctcg 27616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 1608251 - 1608370
Alignment:
Q  168 cgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccgg 267  Q
    |||| |||| |||| ||||||||||||||||||||  ||||||| ||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||    
T  1608251 cgagtattgctgttcccacatgttgtttggctgtg--ccacacgtgtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccgg 1608348  T
Q  268 cgatagttaactgccgaggaaa 289  Q
    ||  ||||||||||||||||||    
T  1608349 cggcagttaactgccgaggaaa 1608370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 27641890 - 27641778
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  27641890 gagaattgctgttcccacatgttgtttggctgtg--ccacactagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 27641794  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  27641793 ggcagttaactgccga 27641778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 6207202 - 6207120
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccga 284  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||  |||||||||||||    
T  6207202 tgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctatcgaggtttttagg-aaccggcggcagttaactgccga 6207120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 13382563 - 13382687
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||| | ||||| |||   ||  |||||||||||||||||||||    
T  13382563 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattactcaaatgtccttcggtagtaaactgacgaagtttttaggaaaccggc 13382660  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  13382661 ggcagttaactgccgaggaaaacctcg 13382687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 28249815 - 28249943
Alignment:
Q  165 acacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaac 264  Q
    |||||||||||||||||| ||||| | |||||||||||  ||||||||||||| |||  ||||||   ||| |||||   | |||||||||||||| |||    
T  28249815 acacgagaattgttgtttacacatttggtttggctgtg--ccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttttagggaac 28249912  T
Q  265 cggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||  ||||||||||||||||||||||||    
T  28249913 cggcggcagttaactgccgaggaaaacctcg 28249943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 11694199 - 11694087
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||| | ||||||||| |||||||    
T  11694199 gagaattgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccaaggtttttagg-aaccggc 11694103  T
Q  269 gatagttaactgccga 284  Q
    |  | |||||||||||    
T  11694102 ggcaattaactgccga 11694087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 17597629 - 17597543
Alignment:
Q  205 ccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    ||||||||||||| |||  |||||   ||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||    
T  17597629 ccacacgagtaaattactcaaatgttcttcggtagtttgctgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaac 17597543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 26712012 - 26712106
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||| ||||||||  |||| ||||||| ||||| |||   || ||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  26712012 tgtgccaaacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaatcggcggcagttaactgccgaggaaaacctcg 26712106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 32691085 - 32691198
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||| ||||  |||||| |||||| |||| |||||||  ||| |||||  || ||||||||||||||||| ||||    
T  32691085 gagaattgttgttcccacatttggtttggttgtg--ccacacaagtaaattacgcaaatgcccctcgacagttaactgccgaagtttttaggaaatcggc 32691182  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  32691183 ggcagttaactgccga 32691198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 30829760 - 30829706
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagttt 255  Q
    |||||||||||||||||||||||||||||| |||| |||||  ||||||||||||    
T  30829760 tgtgccacacgagtaaaatacgaaaatgcccttcgacagttaactaccgaagttt 30829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 2109452 - 2109571
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||| | |||||||||||||  ||||||||||||| |||  |||| ||| |||||||||  || |||||||||| || ||  ||||    
T  2109452 gagaattgttgttcccactttttgtttggctgtg--ccacacgagtaaattactcaaatacctctcggcagttaactgccgaagtttt-agaaatacggc 2109548  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       ||||||||||||||||||||    
T  2109549 tgcagttaactgccgaggaaaac 2109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 11688048 - 11688164
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| ||||||   || ||||||||  ||||||||||||||||| |||||||| ||||||||||  ||  ||||||||| ||  |||||||    
T  11688048 gagaattgttgttcccacatacagtatggctgtg--ccacacgagtaaaataccaaaatgcccttcggcagttaactgtcgaagttttgagtgaaccggc 11688145  T
Q  269 gatagttaactgccgagga 287  Q
    | |||  |||| |||||||    
T  11688146 ggtagcaaactaccgagga 11688164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 26351204 - 26351111
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   |||||||||| | |||| |||||  ||  ||||||||| || |||||||||  ||||||||||||||||||||||||    
T  26351204 tgtgccacacgagtactttacgaaaatgtcattcgacagttaactgtcgaagtttt-agtaaaccggcggcagttaactgccgaggaaaacctcg 26351111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 6207136 - 6207075
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  6207136 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 6207075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 32691182 - 32691243
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || |||||||||||||||| ||||||  ||||||| ||||||||||||||||    
T  32691182 cggcagttaactgccgaagtttttaggaagccggcggcagttaacagccgaggaaaacctcg 32691243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 26349940 - 26350028
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaac 291  Q
    |||| ||||||||||   |||||||||||  ||||||||||  || |||||||||  || |||||||||  ||||||||||||||||||||    
T  26349940 tgtgtcacacgagtattttacgaaaatgctcttcggcagttaactgccgaagttt--agtaaaccggcggcagttaactgccgaggaaaac 26350028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 13164395 - 13164279
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||| ||  ||||||||||||| |||  |||||||  |||||||||  ||||||||    ||| |||||||||    
T  13164395 gagaattgttgttcccacatttagtttggctatg--ccacacgagtaaattactcaaatgcccctcggcagttaactaccgaa----ttatgaaaccggc 13164302  T
Q  269 gatagttaactgccgaggaaaac 291  Q
       |||||||| |||||||||||    
T  13164301 tgcagttaactcccgaggaaaac 13164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 24885174 - 24885140
Alignment:
Q  261 aaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||| ||||||||||||||||||||||||    
T  24885174 aaaccggcgacagttaactgccgaggaaaacctcg 24885140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 11694090 - 11694042
Alignment:
Q  247 ccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||||||||| | |||||  |||||| |||||||||||||||||    
T  11694090 ccgaagtttttaggacatcggcggcagttaattgccgaggaaaacctcg 11694042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 561 - 438
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | || ||| ||||  |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  561 gagaattgttgttcccacatatagtatggttgtg--ccacaccagtaaaatacgaaaatgcccttcggcagtttgctacc-aagtttttaagaaaccggc 465  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||||||||||||    
T  464 ggcagttaactgccgaggaaaacctcg 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 866 - 737
Alignment:
Q  164 aacacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaa 263  Q
    ||||||| |||||||||| |||||| | || ||||||||  ||||| |||||||||||| ||||||| ||||| |||   || |||||||||||||||||    
T  866 aacacgataattgttgttcccacatatagtatggctgtg--ccacatgagtaaaatacggaaatgcccttcggtagtaaactgccgaagtttttaggaaa 769  T
Q  264 ccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||  ||||||||||| ||||||||||||    
T  768 ccggcggcagttaactgcccaggaaaacctcg 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 84481 - 84593
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| |||||||    
T  84481 gagaattgctgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggc 84577  T
Q  269 gatagttaactgccga 284  Q
    |  |||||||||||||    
T  84578 ggcagttaactgccga 84593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 84577 - 84638
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    ||||||||  || ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  84577 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcg 84638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 100 - 9
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaa 262  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  100 gagaattgttgttcccacatatagtttggctgtg--ccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaa 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 49977 - 50105
Alignment:
Q  165 acacgagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaac 264  Q
    |||||||||||||||||| ||||| | |||||||||||  ||||||||||||| |||  ||||||   ||| |||||   | |||||||||||||| |||    
T  49977 acacgagaattgttgtttacacatttggtttggctgtg--ccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttttagggaac 50074  T
Q  265 cggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||  ||||||||||||||||||||||||    
T  50075 cggcggcagttaactgccgaggaaaacctcg 50105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 11592 - 11494
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||||| |||  ||||||| ||||||||||  || ||||||||||||| ||||||||    
T  11592 gagaattgttgttcccacatttggtttggctgtg--ccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 11495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 5327 - 5389
Alignment:
Q  233 tcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||  || |||||||||  ||||||||||||  ||||||||||||||||||||||||    
T  5327 tcggcagttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcg 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 7352 - 7476
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||||||||   ||||||||||   |||||||||||| |||||||||   || ||||||||||||| || |||||    
T  7352 gagaattgttgttcccacatctggtttggctgtga--cacacgagtactttacgaaaatgcccttcggcagtaaactgccgaagtttttagtaacccggc 7449  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  |||| ||| |||||||||||||||    
T  7450 ggcagttgactaccgaggaaaacctcg 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 295
Target Start/End: Original strand, 10587 - 10710
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    ||||||||||||| |||||| | |||||| |||||  |||||||||||| |||  ||||||| ||||||| ||  || |||||||||| || ||||||||    
T  10587 gagaattgttgttcccacatttggtttggttgtgt--cacacgagtaaattacttaaatgcccttcggcaattaactgccgaagtttt-agtaaaccggc 10683  T
Q  269 gatagttaactgccgaggaaaacctcg 295  Q
    |  ||||||||||||||| ||||||||    
T  10684 ggcagttaactgccgagggaaacctcg 10710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 15760 - 15639
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| ||||||||||| | |||||| ||||  |||||||||||   |||||||||| | ||||||||||  ||  ||||||||| || ||||||||    
T  15760 gagaattggtgtttccacatttggtttggttgtg--ccacacgagtactttacgaaaatgtccttcggcagttaactgtcgaagtttt-agtaaaccggc 15664  T
Q  269 gatagttaactgccgaggaaaacct 293  Q
    |  ||||||||||||||||||||||    
T  15663 ggcagttaactgccgaggaaaacct 15639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 41098 - 41037
Alignment:
Q  234 cggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||| || ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  41098 cggcagcttactaccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcg 41037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 41195 - 41097
Alignment:
Q  169 gagaattgttgtttccacatgttgtttggctgtgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggc 268  Q
    |||||||| |||| |||||| | || ||||||||  ||||||||||||||||| ||||| || ||||||||||  |||||||||||| ||| ||||||||    
T  41195 gagaattgctgttcccacatatagtatggctgtg--ccacacgagtaaaatactaaaatacccttcggcagttaactaccgaagtttgtagtaaaccggc 41098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 236368 - 236275
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   |||||||||||| |||||| |||  || |||||| |||||| |||| ||||  ||| ||||||||||||||||||||    
T  236368 tgtgccacacgagtactttacgaaaatgcccttcggcggttaactgccgaag-ttttagtaaactggcggcagtaaactgccgaggaaaacctcg 236275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 12347 - 12440
Alignment:
Q  201 tgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgatagttaactgccgaggaaaacctcg 295  Q
    |||||||||||||||   ||| |||||||| ||||||||||  ||  ||||  |||||| |||||||||  | ||||||||||||||||||||||    
T  12347 tgtgccacacgagtactttacaaaaatgcccttcggcagttaactgtcgaa-attttagtaaaccggcggcaattaactgccgaggaaaacctcg 12440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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