View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3083_low_48 (Length: 250)
Name: NF3083_low_48
Description: NF3083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3083_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 51627244 - 51627489
Alignment:
| Q |
1 |
tgatttgactgatgatggaatggaatatagccagtttctctgtattgatttgcagccacgggaattatggaatacatcttttgaagatccatctctttta |
100 |
Q |
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| T |
51627244 |
tgatttgactgatgatggaatggaatatagccagtttctctgtattgatttgcagccacgggaattatggaatacatcttttgaagatccatctctttta |
51627343 |
T |
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| Q |
101 |
gaaaatatcgaaacaaaatggagtgccattttatcaaaaataaaggatatactgataaagaaagcttctgatgaaaatttggaaatagcaaacactttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51627344 |
gaaaatatcgaaacaaaatggagtgccattttatcaaaaataaaggatatactgataaagaaagcttctgatgaaaatttggaaatagcaaacactttgc |
51627443 |
T |
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| Q |
201 |
ttagagcttgctataatttttaccgggagagttcttctgtgttgct |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51627444 |
ttagagcttgctataatttttaccgggagagttcttctgtggtgct |
51627489 |
T |
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