View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3083_low_57 (Length: 237)
Name: NF3083_low_57
Description: NF3083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3083_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1391638 - 1391709
Alignment:
| Q |
1 |
tggaaagaggattttatttccacaacttttttcaatctttatcaactttatgcacaaatcagtacatctttac |
73 |
Q |
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| T |
1391638 |
tggaaagaggattttatttccacaacttttttcaatctttatcaactttatgcac-aatcagtacatctttac |
1391709 |
T |
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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 1391803 - 1391854
Alignment:
| Q |
167 |
tcttgtgaagaagactacattaggataaggaaacgtatatataagacgattcattt |
222 |
Q |
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| T |
1391803 |
tcttgtgaagaagactacattaggataaggaaacgtata----agacgattcattt |
1391854 |
T |
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