View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3090_high_10 (Length: 540)

Name: NF3090_high_10
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3090_high_10
NF3090_high_10
[»] chr6 (53 HSPs)
chr6 (39-529)||(27696679-27697169)
chr6 (24-529)||(27609195-27609700)
chr6 (20-529)||(27716570-27717079)
chr6 (24-529)||(27680564-27681069)
chr6 (39-529)||(31286158-31286645)
chr6 (39-529)||(26804060-26804559)
chr6 (43-529)||(27675701-27676194)
chr6 (43-529)||(27591104-27591595)
chr6 (51-286)||(26648278-26648513)
chr6 (51-286)||(26754246-26754481)
chr6 (46-327)||(26625026-26625309)
chr6 (46-327)||(26731003-26731286)
chr6 (295-529)||(27704609-27704843)
chr6 (39-281)||(27704334-27704576)
chr6 (39-280)||(28794210-28794451)
chr6 (39-280)||(28788089-28788330)
chr6 (39-283)||(26657820-26658064)
chr6 (39-283)||(26763791-26764035)
chr6 (105-283)||(27425765-27425943)
chr6 (39-529)||(27602795-27603275)
chr6 (394-529)||(26648072-26648207)
chr6 (394-529)||(26754040-26754175)
chr6 (44-286)||(26885915-26886157)
chr6 (100-286)||(26813339-26813525)
chr6 (349-519)||(28787865-28788035)
chr6 (349-519)||(28793986-28794156)
chr6 (394-529)||(26624864-26624999)
chr6 (394-529)||(26730841-26730976)
chr6 (95-286)||(27663347-27663535)
chr6 (39-286)||(26863439-26863686)
chr6 (174-286)||(25491525-25491637)
chr6 (39-279)||(26825668-26825908)
chr6 (117-286)||(26960920-26961086)
chr6 (95-209)||(27216377-27216491)
chr6 (101-221)||(26850568-26850688)
chr6 (105-285)||(27529444-27529624)
chr6 (430-509)||(26813171-26813250)
chr6 (427-519)||(26863183-26863275)
chr6 (430-480)||(27529788-27529838)
chr6 (250-286)||(26951591-26951627)
chr6 (250-286)||(26979230-26979266)
chr6 (470-529)||(26885684-26885743)
chr6 (413-529)||(27663671-27663783)
chr6 (117-221)||(26979299-26979406)
chr6 (250-286)||(26637410-26637446)
chr6 (250-286)||(26743376-26743412)
chr6 (427-529)||(25491785-25491887)
chr6 (148-206)||(26938962-26939020)
chr6 (157-198)||(25484978-25485019)
chr6 (454-527)||(26960729-26960802)
chr6 (162-198)||(25512809-25512845)
chr6 (162-198)||(26144787-26144823)
chr6 (250-286)||(27216300-27216336)
[»] chr8 (2 HSPs)
chr8 (20-529)||(29271909-29272418)
chr8 (38-118)||(22023240-22023320)
[»] chr1 (2 HSPs)
chr1 (95-529)||(266501-266929)
chr1 (39-286)||(28125771-28126018)
[»] scaffold0349 (2 HSPs)
scaffold0349 (394-529)||(1984-2119)
scaffold0349 (20-150)||(15245-15375)
[»] scaffold0277 (4 HSPs)
scaffold0277 (39-280)||(11773-12014)
scaffold0277 (104-280)||(2875-3051)
scaffold0277 (335-518)||(3088-3272)
scaffold0277 (335-518)||(12051-12235)
[»] chr2 (1 HSPs)
chr2 (39-278)||(17991301-17991540)
[»] scaffold1870 (2 HSPs)
scaffold1870 (104-280)||(616-792)
scaffold1870 (335-519)||(393-578)
[»] scaffold0419 (2 HSPs)
scaffold0419 (104-280)||(9335-9511)
scaffold0419 (335-519)||(9111-9297)
[»] scaffold0003 (1 HSPs)
scaffold0003 (105-283)||(61420-61598)
[»] chr4 (7 HSPs)
chr4 (105-282)||(18075613-18075790)
chr4 (39-284)||(18677713-18677958)
chr4 (39-284)||(18697555-18697800)
chr4 (39-284)||(18653631-18653876)
chr4 (39-284)||(18729649-18729894)
chr4 (39-284)||(18722227-18722472)
chr4 (92-284)||(18687820-18688012)


Alignment Details
Target: chr6 (Bit Score: 389; Significance: 0; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 39 - 529
Target Start/End: Original strand, 27696679 - 27697169
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27696679 tgaagttatttcacttgccttgtttaaaatactagttgacagacacttcgataaacatcccttccatttcaatacactcaaacttcttggtagatgcttg 27696778  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27696779 agaccttcagaaaaatggccattttcaatgataactgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 27696878  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncatgaatcaaccacaataaaaataagatatagaaatattaacat 338  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  27696879 ggagattcatatatatcatttcaattttactagttcccttttaacaaagataaaaacatgaatcaaccacaataaaaataagatatagaaatattaacat 27696978  T
Q  339 gtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatagatatca 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||| ||||||||||||||||||    
T  27696979 gtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaatagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatca 27697078  T
Q  439 atcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||||||||||||||| |||| || |||  |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  27697079 atcttactcacagtgttttctcttaaaacccgagttatatcatcctgacagcataacctacttctttctccaggctctttagttgattctt 27697169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 24 - 529
Target Start/End: Original strand, 27609195 - 27609700
Alignment:
Q  24 gaaacaaaatcattgtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaactt 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  27609195 gaaacaaaatcattgtgaagttatttcacttgccttgtttaaaatattagatgacagacacttcgataaacatcctttccatttcaatacacgcaaactg 27609294  T
Q  124 cttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatca 223  Q
    ||||| |||| ||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27609295 cttggaagatacttcagacctccagaaaaatggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatca 27609394  T
Q  224 cggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncatgaatcaaccacaataaaaataagata 323  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |    
T  27609395 cggattccatggagtggagattcatatatatcatttcaattttactagttcccttttaacaaagataaaaacatgaatcaaccacaataaaaataagaca 27609494  T
Q  324 tagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaa 423  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||| |||    
T  27609495 tagatatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaa 27609594  T
Q  424 tgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattg 523  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27609595 tgatcatagatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattg 27609694  T
Q  524 attctt 529  Q
    ||||||    
T  27609695 attctt 27609700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 20 - 529
Target Start/End: Original strand, 27716570 - 27717079
Alignment:
Q  20 gacggaaacaaaatcattgtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaa 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27716570 gacggaaacaaaatcattgtgaagttatttcacttgccttgtttaaaatcctagatgacagacacttcgataaacatcctttccatttcaatacactcaa 27716669  T
Q  120 acttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtct 219  Q
    ||| ||||| |||| ||||||||||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  27716670 actgcttggaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtct 27716769  T
Q  220 atcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncatgaatcaaccacaataaaaataa 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  27716770 atcacggattccatggagtggagattcatatatatcatttcaattttactagttcccttttaacaaagataaaaacatgaatcaaccacaataaaaataa 27716869  T
Q  320 gatatagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataac 419  Q
    |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |       ||||||| ||||||||||||||||||    
T  27716870 gatatagaaatattaacatgtaattgagtgaaaagaaatgctcgttttagatgatcatatttagttcaaaaagagcaaagttgtattaaaactaaataac 27716969  T
Q  420 caaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
     ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27716970 aaaatgatcatagatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctcttta 27717069  T
Q  520 attgattctt 529  Q
    ||||||||||    
T  27717070 attgattctt 27717079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 24 - 529
Target Start/End: Complemental strand, 27681069 - 27680564
Alignment:
Q  24 gaaacaaaatcattgtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaactt 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  27681069 gaaacaaaatcattgtgaagttatttcacttgccttgtttaaaatactagatgacagacacttcgataaacatcctttccatttcaatacacgcaaactg 27680970  T
Q  124 cttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatca 223  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27680969 cttggaagatacttgagacctccagaaaaaaggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatca 27680870  T
Q  224 cggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncatgaatcaaccacaataaaaataagata 323  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |    
T  27680869 cggattccatggagtggagattcatatatatcatttcaattttactagttcccttttaacaaagataaaaacatgaatcaaccacaataaaaataagaca 27680770  T
Q  324 tagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaa 423  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||| |||    
T  27680769 tagatatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaa 27680670  T
Q  424 tgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattg 523  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||| || || |  ||||||||||||| ||||||||||||||||  ||    
T  27680669 tgatcatagatatcaatcatactcacagtgttttcttttaaaacatgaattatatcttcttgacgccataacctacttcgttctccaggctctttaggtg 27680570  T
Q  524 attctt 529  Q
    ||||||    
T  27680569 attctt 27680564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 39 - 529
Target Start/End: Complemental strand, 31286645 - 31286158
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||| ||||||||||||| |||||||||||||||| ||| | | | ||||||||||||||||||||||||| ||||||||  |||| |||| ||||    
T  31286645 tgaagttacttcacttgccttgcttaaaatactagatgatagagactccaataaacatcctttccatttcaatactctcaaactgtttggaagatacttg 31286546  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    || || |  ||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  31286545 agtccattggaaaaatggccattttcaatgattagtgttttaagttttgtcatcttcttgaaggccattcctttctggtctattacggattccatggagt 31286446  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaac------aaagnnnnnnncatgaatcaaccacaataaaaataagatatagaaatat 332  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||      |||        ||| |||||||||||||||||||||||||| || | ||    
T  31286445 ggaaattcatatatatcatttcaattttactagttcccttttaacaaaaaaaaaaaaaagaacataaatcaaccacaataaaaataagatatggagaaat 31286346  T
Q  333 taacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatag 432  Q
    | |||||||||| ||| |||| |||| ||||||| ||||| |||||   ||          |||||||||| ||||||||||||||| || ||| |||||    
T  31286345 ttacatgtaattaagtaaaaataaatactagtatgagatggtcataaaaag---------agcaaagtcgttttaaaactaaataacaaattgaacatag 31286255  T
Q  433 atatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    |||||||||||||||||||||||||| |||||  || ||||||||||||| || || |||| ||||||||||||||| |||||||||  ||||||||    
T  31286254 atatcaatcttactcacagtgttttcatttaaagcatgaactatatcatcttgacaccatagcctacttctttctcctggctctttaggtgattctt 31286158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 39 - 529
Target Start/End: Complemental strand, 26804559 - 26804060
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| |||||||||||||||| ||| | | |||||||||||||||||||||||||||  ||||||| ||||| |||| ||||    
T  26804559 tgaagttatttcacttgccttgcttaaaatactagatgatagagactccgataaacatcctttccatttcaatactatcaaactgcttggaagatacttg 26804460  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  26804459 agaccttcagaaaaatgtccattttcaatgataagtgttctcagttttgtcatctttttgaaggcctttcctttctggtctattacggattccatggagt 26804360  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaac---------aaagnnnnnnncatgaatcaaccacaataaaaataagatatagaaa 329  Q
    ||| |||||| | ||||||||||||||||||||||||||||||||         |||        ||| |||||| |||||||| ||||||||||||| |    
T  26804359 ggaaattcatatttatcatttcaattttactagttcccttttaacacaaaaaaaaaaaaaaataacat-aatcaatcacaataacaataagatatagaga 26804261  T
Q  330 tattaacatgtaattgagtg-aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatc 428  Q
     ||| | |||||||| |||| |||| |||| ||||||| ||||| |||||| ||||||       ||||||||||||  |||||||||||| || ||| |    
T  26804260 aatttatatgtaattaagtgaaaaaaaaatactagtatgagatggtcatatgtagtcctaaaaatgcaaagtcgtatctaaactaaataacaaattgaac 26804161  T
Q  429 atagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattct 528  Q
    ||| |||||||||||||||||| ||||||||||||  ||| |||||||||| || || |  ||||||||||||| || | |||| ||||||  |||||||    
T  26804160 ataaatatcaatcttactcacaatgttttcttttataacatgaactatatcttcatgacgccataacctacttcgtttttcaggatctttaggtgattct 26804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 43 - 529
Target Start/End: Original strand, 27675701 - 27676194
Alignment:
Q  43 tttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagac 142  Q
    |||||||||||||||||| ||||||||||||| || ||| | || ||||||||||||| |||||||||| |  ||||||| ||||| |||||||||||||    
T  27675701 tttatttcacttgccttgcttaaaatactagacgagagagactttgataaacatccttcccatttcaatgctttcaaactgcttggaagatgcttgagac 27675800  T
Q  143 cttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggag 242  Q
    ||| |||| ||||||||||||||||||||| |||||| | | |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |     
T  27675801 ctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacggattccatggagtgcaa 27675900  T
Q  243 attcatttatatcatttcaattttactagttcccttttaaca-----aagnnnnnnncatgaatcaaccacaataaaaataagatatagaaatattaaca 337  Q
    ||||||  ||||||||||| |||||| |||||||||||||||     ||         ||| ||||||||||||||||||    || ||| | ||| |||    
T  27675901 attcatacatatcatttcagttttaccagttcccttttaacaaaaataaaaataaaaaatgcatcaaccacaataaaaatcttttacagagaaatttaca 27676000  T
Q  338 tgtaattgagtg--aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatagata 435  Q
    ||||||| ||||  |||| |||| ||| ||| ||||| |||||||||||||       ||||| | |||||||||||||||||| || ||| ||||||||    
T  27676001 tgtaattaagtggaaaaaaaaatactaatatgagatggtcatatttagtccaaaatgagcaaaattgtattaaaactaaataacaaattgaacatagata 27676100  T
Q  436 tcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||| ||  | |||||||| |||||||||||||||||||||  ||||||||    
T  27676101 tcaatcttactcacagtgttttctgttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattctt 27676194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 43 - 529
Target Start/End: Original strand, 27591104 - 27591595
Alignment:
Q  43 tttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagac 142  Q
    |||||||||||||||||| ||||||||||||| || ||| | || ||||||||||||| |||||||||| |  ||||||| ||| | |||| ||||||||    
T  27591104 tttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagac 27591203  T
Q  143 cttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggag 242  Q
    ||| |||| |||||||||||||||| |||| |||||| | | |||||||||| |||||||||||||||||||||||||| || |||||||| ||||| |     
T  27591204 ctttagaacaatggccattttcaataataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaa 27591303  T
Q  243 attcatttatatcatttcaattttactagttcccttttaaca-----aagnnnnnnncatgaatcaaccacaataaaaataagatatagaaatattaaca 337  Q
    ||||||  ||||||||||| |||||| |||||||| ||||||     ||         ||| ||||||||||||||||||  | || ||| | ||| |||    
T  27591304 attcatacatatcatttcagttttaccagttccctgttaacaaaaataaaaataaaaaatgcatcaaccacaataaaaatctgttacagagaaatttaca 27591403  T
Q  338 tgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatagatatc 437  Q
    ||||||| |||| ||| | || ||||||| ||||| |||||||||||||       ||||||| |||||||||||||||||| || ||| ||||||||||    
T  27591404 tgtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatc 27591503  T
Q  438 aatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||| ||  | |||||||| |||||||||||||||||||||  ||||||||    
T  27591504 aatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattctt 27591595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 51 - 286
Target Start/End: Complemental strand, 26648513 - 26648278
Alignment:
Q  51 acttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaa 150  Q
    |||||||||| |||||||||||||||| ||| | |  |||||||||||||||||||||||||| |||||||| ||||| ||||  || ||||||| ||||    
T  26648513 acttgccttgcttaaaatactagatgatagagactctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaa 26648414  T
Q  151 aaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcattt 250  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |    
T  26648413 aaatgaccattttcaatgataagtgttttgagttttgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatat 26648314  T
Q  251 atatcatttcaattttactagttcccttttaacaaa 286  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26648313 atatcatttcaattttactagttccctttcaacaaa 26648278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 51 - 286
Target Start/End: Complemental strand, 26754481 - 26754246
Alignment:
Q  51 acttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaa 150  Q
    |||||||||| |||||||||||||||| ||| | |  |||||||||||||||||||||||||| |||||||| ||||| ||||  || ||||||| ||||    
T  26754481 acttgccttgcttaaaatactagatgatagagactctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaa 26754382  T
Q  151 aaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcattt 250  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |    
T  26754381 aaatgaccattttcaatgataagtgttttgagttttgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatat 26754282  T
Q  251 atatcatttcaattttactagttcccttttaacaaa 286  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26754281 atatcatttcaattttactagttccctttcaacaaa 26754246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 46 - 327
Target Start/End: Complemental strand, 26625309 - 26625026
Alignment:
Q  46 atttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagacctt 145  Q
    ||||||||||||||||| |||| ||||| ||| ||| | | ||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||    
T  26625309 atttcacttgccttgttcaaaaaactagctgatagagactccgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctt 26625210  T
Q  146 cagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagatt 245  Q
     ||||||  | |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| | | |||    
T  26625209 tagaaaaccgaccatcttcaatgataagtgttttgagttttgtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaatt 26625110  T
Q  246 catttatatcatttcaattttactagttccc-ttttaac-aaagnnnnnnncatgaatcaaccacaataaaaataagatataga 327  Q
    ||| ||||||||||||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||    
T  26625109 catatatatcatttcaattttactagttccctttttaacaaaaaagaaaaacatgaatcaaccacaataaaaataagatataga 26625026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 46 - 327
Target Start/End: Complemental strand, 26731286 - 26731003
Alignment:
Q  46 atttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagacctt 145  Q
    ||||||||||||||||| |||| ||||| ||| ||| | | ||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||    
T  26731286 atttcacttgccttgttcaaaaaactagctgatagagactccgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctt 26731187  T
Q  146 cagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagatt 245  Q
     ||||||  | |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| | | |||    
T  26731186 tagaaaaccgaccatcttcaatgataagtgttttgagttttgtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaatt 26731087  T
Q  246 catttatatcatttcaattttactagttccc-ttttaac-aaagnnnnnnncatgaatcaaccacaataaaaataagatataga 327  Q
    ||| ||||||||||||||||||||||||||| ||||||| |||        |||||||||||||||||||||||||||||||||    
T  26731086 catatatatcatttcaattttactagttccctttttaacaaaaaagaaaaacatgaatcaaccacaataaaaataagatataga 26731003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 295 - 529
Target Start/End: Original strand, 27704609 - 27704843
Alignment:
Q  295 catgaatcaaccacaataaaaataagatatagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnng 394  Q
    ||||||||| |||||| ||| |||||||||||| | | | || |  |||| ||| | || |||| ||||||| ||||| |||||||||||||       |    
T  27704609 catgaatcagccacaacaaatataagatatagagaaacttacttcgaattaagtaataaaaaatactagtatgagatggtcatatttagtccaaaaagag 27704708  T
Q  395 caaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataa 494  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  27704709 caaagtcatattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttcttttaagacattaactatatcatcatggcagcataa 27704808  T
Q  495 cctacttctttctccaggctctttaattgattctt 529  Q
    |||||||||||||||||||||||||||||||||||    
T  27704809 cctacttctttctccaggctctttaattgattctt 27704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 39 - 281
Target Start/End: Original strand, 27704334 - 27704576
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| ||||||||||||| || ||| | || ||||||||||||| |||||||||| |  ||||||| ||||| |||| ||||    
T  27704334 tgaagttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttggaagatacttg 27704433  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||| |||| ||||||||||||||||||||| |||||| | | |||||||||||||||||||| ||||||| | |||||| | ||||||||||||||    
T  27704434 agacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatcttcttgaaggccattcctttttggtctattatggattccatggagt 27704533  T
Q  239 ggagattcatttatatcatttcaattttactagttccctttta 281  Q
    | | |||||| || ||||||| |||||||||||||||||||||    
T  27704534 gaaaattcatatacatcatttgaattttactagttccctttta 27704576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 39 - 280
Target Start/End: Complemental strand, 28794451 - 28794210
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| ||||| |||| ||| ||||| | |  |||||||||||     |||||||||| |||||||| ||||| ||||  |||    
T  28794451 tgaagttatttcacttgccttgcttaaactacttgataacagagactctgataaacatccacgtaatttcaatactctcaaactacttggaagatagttg 28794352  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||| ||||||||||||||||||||||||||  ||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||  ||||     
T  28794351 agacctttagaaaaatggccattttcaatgataagcgttttcaatcttgtcatcttcttgaaggcctttcctttcttgtctattacggattcctcggagg 28794252  T
Q  239 ggagattcatttatatcatttcaattttactagttccctttt 280  Q
    ||| |||||| |||||||||||||||||||||||||||||||    
T  28794251 ggaaattcatatatatcatttcaattttactagttccctttt 28794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 39 - 280
Target Start/End: Complemental strand, 28788330 - 28788089
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| ||||| |||  ||| | ||| | |  |||||||||||     |||||||||| |||||||| ||||| ||||  |||    
T  28788330 tgaagttatttcacttgccttgcttaaactacatgataaaagagactctgataaacatccacgtaatttcaatactctcaaactacttggaagatagttg 28788231  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||| ||||||||||||||||||||||||||  ||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||  ||||     
T  28788230 agacctttagaaaaatggccattttcaatgataagcgttttcaatcttgtcatcttcttgaaggcctttcctttcttgtctattacggattcctcggagg 28788131  T
Q  239 ggagattcatttatatcatttcaattttactagttccctttt 280  Q
    ||| |||||| |||||||||||||||||||||||||||||||    
T  28788130 ggaaattcatatatatcatttcaattttactagttccctttt 28788089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 39 - 283
Target Start/End: Complemental strand, 26658064 - 26657820
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||||| |||||| |||||| ||| | |||||   |||||||||||||||||| |  |||||||| ||||| ||||| ||     
T  26658064 tgaacttatttcacttgccttgtttgaaatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatgtttt 26657965  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     |||||| ||||||| ||||||||||||||||||  |||||||| |||||||||||| |||||| |||||| |||  |||||| | || |||||| |||     
T  26657964 ggacctttagaaaaacggccattttcaatgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatcgagg 26657865  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaac 283  Q
    |   |||||  |||||||||||||| ||||| |||||||||||||    
T  26657864 gacaattcagatatatcatttcaatgttactggttcccttttaac 26657820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 39 - 283
Target Start/End: Complemental strand, 26764035 - 26763791
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||||| |||||| |||||| ||| | |||||   |||||||||||||||||| |  |||||||| ||||| ||||| ||     
T  26764035 tgaacttatttcacttgccttgtttgaaatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatgtttt 26763936  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     |||||| ||||||| ||||||||||||||||||  |||||||| |||||||||||| |||||| |||||| |||  |||||| | || |||||| |||     
T  26763935 ggacctttagaaaaacggccattttcaatgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatcgagg 26763836  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaac 283  Q
    |   |||||  |||||||||||||| ||||| |||||||||||||    
T  26763835 gacaattcagatatatcatttcaatgttactggttcccttttaac 26763791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 105 - 283
Target Start/End: Original strand, 27425765 - 27425943
Alignment:
Q  105 tttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcc 204  Q
    ||||| ||| |||||||||||||| |||| |||||||| || |  |  || |||||||||| | ||||| |||||||| | |||||||||||||||||||    
T  27425765 tttcattaccctcaaacttcttggaagatacttgagactttgaatatgatagccattttcagtaataaacgttttgaggtgtgtcatcttcttgaaggcc 27425864  T
Q  205 tttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaac 283  Q
    ||||| ||||||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||| |||||||||||||    
T  27425865 tttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaac 27425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 39 - 529
Target Start/End: Original strand, 27602795 - 27603275
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||||||||||||||||||||||| ||||||| |||||| ||| | |||||   ||| || ||||||||  | |  |||||||| ||||| ||||  |      
T  27602795 tgaatttatttcacttgccttgttcaaaatacaagatgatagagacttcgaaggacaaccattccatttgcaaaatctcaaactacttggaagatagtca 27602894  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     |||||  |||||| || |||||||||||||||| ||||||||| |||||||||||||| | ||||||||| |||   ||||| |||  |||||| |||     
T  27602895 ggacctctagaaaactgaccattttcaatgataagtgttttgagatttgtcatcttcttcatggcctttccattccactctattacgttttccattgagg 27602994  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncat-gaatcaaccacaataaaaataagatatagaaatattaaca 337  Q
    |   |||||  | |||||||||||| || ||||||||||||||| |||         |  |||| |||||||||| |||||| |||            ||    
T  27602995 gacaattcaaatgtatcatttcaatgttcctagttcccttttaagaaaaataaaacaacagaataaaccacaatataaataatata------------ca 27603082  T
Q  338 tgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaa-gtcgtattaaaactaaataaccaaatgatcatagatat 436  Q
    ||||||| |||| ||| ||||  |||||| |||||||||||||||||||        |||| ||| ||||||||||||||||| || ||||  || ||||    
T  27603083 tgtaattaagtggaaaaaaataatagtatgagatgatcatatttagtccaaaaagaccaaaagtcatattaaaactaaataacaaattgatattatatat 27603182  T
Q  437 caatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||||||||||||||||| |||  ||| |||||||||| || || || ||||||||||||||||||||||||||||||  ||||||||    
T  27603183 caatcttactcacagtgttttctgttagaacatgaactatatcgtcttgacaccataacctacttctttctccaggctctttaggtgattctt 27603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 394 - 529
Target Start/End: Complemental strand, 26648207 - 26648072
Alignment:
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||| || || ||||    
T  26648207 gcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacaccata 26648108  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||  ||||||||||||||||  ||||||||    
T  26648107 acctactttgttctccaggctctttacgtgattctt 26648072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 394 - 529
Target Start/End: Complemental strand, 26754175 - 26754040
Alignment:
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||| || || ||||    
T  26754175 gcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacaccata 26754076  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||  ||||||||||||||||  ||||||||    
T  26754075 acctactttgttctccaggctctttacgtgattctt 26754040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 44 - 286
Target Start/End: Complemental strand, 26886157 - 26885915
Alignment:
Q  44 ttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttgagacc 143  Q
    |||||| |||||||||| | |||||||||||||| ||| | |  ||   ||||||||||||||| ||||| ||||||||  |||| |||| |||  ||||    
T  26886157 ttattttacttgccttgctaaaaatactagatgatagagactctgaagtacatcctttccatttaaatactctcaaactatttggaagatacttcggacc 26886058  T
Q  144 ttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggaga 243  Q
    ||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||| ||   |||||| |||| |||||| | | ||| |    
T  26886057 tttggaaaaatggccattttcaatgataagagttttgagttttgtcatcttcttgaaggactttccattacagtctattacgggttccattgcg-ggaca 26885959  T
Q  244 -ttcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
     ||||  |||||||||||||| || |||||||||||||||||||    
T  26885958 gttcagatatatcatttcaatgttgctagttcccttttaacaaa 26885915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 100 - 286
Target Start/End: Complemental strand, 26813525 - 26813339
Alignment:
Q  100 ttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttga 199  Q
    ||||| |||||||| |||||| | || || ||||||||| |||||| |||||| || ||||||||||| |||| ||||||||||||||||||||||||||    
T  26813525 ttccacttcaatactctcaaagtactaggaagatgcttgggacctttagaaaattgaccattttcaataataagtgttttgagttttgtcatcttcttga 26813426  T
Q  200 aggcctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||||||||| |||   |||||| |||| | | | | | ||| ||| |  |||||||||||||||||||||||||||||||||||||    
T  26813425 aggcctttccattccaatctatctcggaattctttgtggggaaatttagatatatcatttcaattttactagttcccttttaacaaa 26813339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 28788035 - 28787865
Alignment:
Q  349 gaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactca 448  Q
    ||||| |||| ||||||| ||||| |||||||||||||       |||||||||||| |||| |||||||| || ||| |||| ||||||||| ||||||    
T  28788035 gaaaacaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaattgaacataaatatcaatcatactca 28787936  T
Q  449 cagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
    | |||||||||||||| |||  |||||||||||| || || ||||||||||||||||||||||||||||||    
T  28787935 cggtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctcttta 28787865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 28794156 - 28793986
Alignment:
Q  349 gaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactca 448  Q
    ||||| |||| ||||||| ||||| |||||||||||||       |||||||||||| |||| |||||||| || ||| |||| ||||||||| ||||||    
T  28794156 gaaaacaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaattgaacataaatatcaatcatactca 28794057  T
Q  449 cagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
    | |||||||||||||| |||  |||||||||||| || || ||||||||||||||||||||||||||||||    
T  28794056 cggtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctcttta 28793986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 394 - 529
Target Start/End: Complemental strand, 26624999 - 26624864
Alignment:
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| || || ||||    
T  26624999 gcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatcttgacaccata 26624900  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    | ||||||| ||||||||||||||||  ||||||||    
T  26624899 atctacttcgttctccaggctctttaggtgattctt 26624864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 394 - 529
Target Start/End: Complemental strand, 26730976 - 26730841
Alignment:
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| || || ||||    
T  26730976 gcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatcttgacaccata 26730877  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    | ||||||| ||||||||||||||||  ||||||||    
T  26730876 atctacttcgttctccaggctctttaggtgattctt 26730841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 95 - 286
Target Start/End: Original strand, 27663347 - 27663535
Alignment:
Q  95 atcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatctt 194  Q
    |||||||||||||||||||  |||||||| |||| |||| ||||||||||| |||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  27663347 atcctttccatttcaatactatcaaactttttggaagatacttgagacctttagaaaaatagcccttttcaatgataagtgttttgagttttttcatctt 27663446  T
Q  195 cttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
    ||| ||||||||| | ||  |||   | | || |||||| |||     |||||  |||||||||||||||||||||||||||||||||||||    
T  27663447 cttaaaggccttttcattgatgt---tgatgggttccattgaggaacaattcagatatatcatttcaattttactagttcccttttaacaaa 27663535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 39 - 286
Target Start/End: Complemental strand, 26863686 - 26863439
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||| |||||||||||||| |||| || |||||| ||| | || ||   | ||||||||||||| ||||| |||||||  ||||  || |  |||    
T  26863686 tgaaattatatcacttgccttgttcaaaaaacaagatgatagagacttggaaggatatcctttccattttaatactctcaaacaacttgaaaggtatttg 26863587  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     |||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||| |||  |||||| |||| |||| | ||      
T  26863586 ggacctttagaaaaatggccattttcaatgacaagtgttttgagttttttcatcttcttgaaggcctttccattccagtctattacgggttccgttgaag 26863487  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
    |   || ||  |||| |||||||||||||||||||||||||| |||||    
T  26863486 gacaatgcagatataccatttcaattttactagttcccttttcacaaa 26863439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 25491525 - 25491637
Alignment:
Q  174 tgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagtt 273  Q
    |||||||||||||||| ||||||||||||||| ||| |||  ||||||  || ||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  25491525 tgttttgagttttgtcgtcttcttgaaggcctctccattccagtctatttcgaattccatggaggggaaattcatatatatcatttcaattttactagtt 25491624  T
Q  274 cccttttaacaaa 286  Q
    |||||||||||||    
T  25491625 cccttttaacaaa 25491637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 279
Target Start/End: Complemental strand, 26825908 - 26825668
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||||| |||||||||||||| ||| ||| |||   | | |  | |||||||||||| |||||||| ||||| || | ||      
T  26825908 tgaacttatttcacttgccttgttcaaaatactagatgatagagaatccgaaggatacctatcccatttcaatactctcaaactacttgggaggtactct 26825809  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     |||||| |||||||||||| |||| ||| |||| ||||||||| |||||||||||| |||| |||||||| |||   ||||| || | || | |||||     
T  26825808 ggacctttagaaaaatggccctttttaataataagtgttttgagatttgtcatcttcatgaaagcctttccattccaatctattacagttttcttggagg 26825709  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttt 279  Q
    ||| |||||| |||| |||||| | ||||||||||||||||    
T  26825708 ggaaattcatatatagcatttcgactttactagttcccttt 26825668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 117 - 286
Target Start/End: Complemental strand, 26961086 - 26960920
Alignment:
Q  117 caaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttg 216  Q
    |||||| ||||| |||| |||| |||||| |||||||| ||| || |||||||||| ||||||||| ||||||||||||||||| |||||| | ||| ||    
T  26961086 caaactacttggaagatacttgggacctttagaaaaattgcctttctcaatgataagtgttttgagatttgtcatcttcttgaatgccttttcattcatg 26960987  T
Q  217 tctatcacggattccatggagtggag-attcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||   |||| || ||| ||| |||| |||||  |||||||||||||||||||||||||||||||||||||    
T  26960986 tct---acgggtttcattgag-ggagaattcaaatatatcatttcaattttactagttcccttttaacaaa 26960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 27216491 - 27216377
Alignment:
Q  95 atcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatctt 194  Q
    |||||||||||||| | |  |||||||| ||||| ||||  ||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  27216491 atcctttccatttccaaaatctcaaactacttggaagataattgggacctttagaaaaatggccattttcaatgataaatgttttgagatttttcatctt 27216392  T
Q  195 cttgaaggcctttcc 209  Q
    | |||||||||||||    
T  27216391 cgtgaaggcctttcc 27216377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 26850688 - 26850568
Alignment:
Q  101 tccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaa 200  Q
    |||||| |||||| |||||||| || || |||| |||| |||||| |||||||| | ||| ||||| ||||| ||||||||| |||||||||||||||||    
T  26850688 tccattccaatactctcaaactactcggaagatacttgggacctttagaaaaattgtcatcttcaacgataagtgttttgagatttgtcatcttcttgaa 26850589  T
Q  201 ggcctttcctttcttgtctat 221  Q
    ||||||| | ||| |||||||    
T  26850588 ggccttttcattcatgtctat 26850568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 105 - 285
Target Start/End: Original strand, 27529444 - 27529624
Alignment:
Q  105 tttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcc 204  Q
    ||||| ||| |||||||| ||||| |||| || ||||| || ||||  ||||||||||||| | |||||||||||||| ||||||||||||| ||||||     
T  27529444 tttcattaccctcaaactacttggaagatactcgagacttttagaatgatggccattttcagtaataaatgttttgaggtttgtcatcttctcgaaggca 27529543  T
Q  205 tttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaa 285  Q
    ||||| |||   || ||  | |||||||||||| |||  ||||| | ||||||||  ||||| || |||||||||||||||    
T  27529544 tttccattccaatcaatatcagattccatggaggggaatttcatatttatcattttgattttccttgttcccttttaacaa 27529624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 430 - 509
Target Start/End: Complemental strand, 26813250 - 26813171
Alignment:
Q  430 tagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctcc 509  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| || || |||| |||||||| ||||||    
T  26813250 tagatatcaatcttactcacaatgttttcttttaaaacatgaactatatcatcttgacaccatagcctacttcgttctcc 26813171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 427 - 519
Target Start/End: Complemental strand, 26863275 - 26863183
Alignment:
Q  427 tcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
    ||||| |||||||||||||||||||||||||||| ||| ||  | | ||||||||| || || ||||||||||||| ||| || |||||||||    
T  26863275 tcataaatatcaatcttactcacagtgttttcttctaaaacgtggattatatcatcatgacaccataacctacttcgttcacccggctcttta 26863183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 480
Target Start/End: Original strand, 27529788 - 27529838
Alignment:
Q  430 tagatatcaatcttactcacagtgttttcttttaagacacgaactatatca 480  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  27529788 tagatatcaatcttactcacagtgtttttttttaaaacatgaactatatca 27529838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 26951627 - 26951591
Alignment:
Q  250 tatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||||||||||||||||||||||||||||||||||||    
T  26951627 tatatcatttcaattttactagttcccttttaacaaa 26951591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 26979266 - 26979230
Alignment:
Q  250 tatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||||||||||||||||||||||||||||||||||||    
T  26979266 tatatcatttcaattttactagttcccttttaacaaa 26979230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 529
Target Start/End: Complemental strand, 26885743 - 26885684
Alignment:
Q  470 gaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||||||| || || ||||||||||| | |||||||||||||||| |||||||||    
T  26885743 gaactatatcatcgtgacaccataacctactacgttctccaggctctttacttgattctt 26885684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 529
Target Start/End: Original strand, 27663671 - 27663783
Alignment:
Q  413 aaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccagg 512  Q
    ||||||| || || ||||||||||||||||||||    ||||||| |||||| ||| || |||||||||| || |  || |||||| | |  ||||||||    
T  27663671 aaataacaaattgttcatagatatcaatcttact----gtgttttgttttaaaacatgagctatatcatcatgacgccacaacctagtgcgctctccagg 27663766  T
Q  513 ctctttaattgattctt 529  Q
    |||||||||||||||||    
T  27663767 ctctttaattgattctt 27663783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 26979406 - 26979299
Alignment:
Q  117 caaacttcttggtagatgcttgagaccttcagaaaaatggccatt---ttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttc 213  Q
    |||||| ||||| |||| | || |||||| |||||||| |||||    || |||||||| ||||||||| ||||||||||||||||| |||||| | |||    
T  26979406 caaactacttggaagatacctgggacctttagaaaaattgccatcagcttgaatgataagtgttttgagatttgtcatcttcttgaatgccttttcattc 26979307  T
Q  214 ttgtctat 221  Q
     |||||||    
T  26979306 atgtctat 26979299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 26637446 - 26637410
Alignment:
Q  250 tatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26637446 tatatcatttgaattttactagttcccttttaacaaa 26637410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 26743412 - 26743376
Alignment:
Q  250 tatatcatttcaattttactagttcccttttaacaaa 286  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26743412 tatatcatttgaattttactagttcccttttaacaaa 26743376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 529
Target Start/End: Original strand, 25491785 - 25491887
Alignment:
Q  427 tcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgatt 526  Q
    |||||||||||||||||||| || ||||||||| |||| ||  |||| ||||||||  | || || |||||||| | ||||||||| || |||  |||||    
T  25491785 tcatagatatcaatcttacttaccgtgttttctcttaaaacttgaaccatatcatcgggacaccacaacctactacgttctccaggatcattacgtgatt 25491884  T
Q  527 ctt 529  Q
    |||    
T  25491885 ctt 25491887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 26939020 - 26938962
Alignment:
Q  148 gaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctt 206  Q
    |||||||| ||| ||| |||||||| |||||| || ||| |||||||||||||||||||    
T  26939020 gaaaaatgaccacttttaatgataagtgttttaagatttttcatcttcttgaaggcctt 26938962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 25485019 - 25484978
Alignment:
Q  157 ccattttcaatgataaatgttttgagttttgtcatcttcttg 198  Q
    |||| ||||||||||| ||||||||| |||||||||||||||    
T  25485019 ccatcttcaatgataagtgttttgagatttgtcatcttcttg 25484978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 26960802 - 26960729
Alignment:
Q  454 ttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattc 527  Q
    ||||||| ||| ||| |||||||||||||  | || || |||||||| | || |||||||||||||||||||||    
T  26960802 ttttcttgtaaaacatgaactatatcatcacgacaccacaacctactgcgttttccaggctctttaattgattc 26960729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 25512845 - 25512809
Alignment:
Q  162 ttcaatgataaatgttttgagttttgtcatcttcttg 198  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25512845 ttcaatgataagtgttttgagatttgtcatcttcttg 25512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 26144823 - 26144787
Alignment:
Q  162 ttcaatgataaatgttttgagttttgtcatcttcttg 198  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26144823 ttcaatgataagtgttttgagatttgtcatcttcttg 26144787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 27216336 - 27216300
Alignment:
Q  250 tatatcatttcaattttactagttcccttttaacaaa 286  Q
    ||||||||||||||||| | |||||||||||||||||    
T  27216336 tatatcatttcaattttccaagttcccttttaacaaa 27216300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 380; Significance: 0; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 20 - 529
Target Start/End: Original strand, 29271909 - 29272418
Alignment:
Q  20 gacggaaacaaaatcattgtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaa 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29271909 gacggaaacaaaatcattgtgaagttatttcacttgccttgtttaaaatactagatgacagacacttcgataaacatcctttccatttcaatacactcaa 29272008  T
Q  120 acttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtct 219  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29272009 acttcttggtaaatgcttgagacctccagaaaaatggccattttcgaagataactgttttgagttttgtcatcttcttgaaggcctttcctttcttgtct 29272108  T
Q  220 atcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaacaaagnnnnnnncatgaatcaaccacaataaaaataa 319  Q
    ||||| ||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  29272109 atcacagattctatggaatggagattcgtatatatcatttcaattttactagttcccttttaacaaagaaaaaaatatgaatcaaccacaataaaaataa 29272208  T
Q  320 gatatagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataac 419  Q
    ||| || ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||    
T  29272209 gatgtacaaatattaacatgcaattgagtgaaaataaatgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataac 29272308  T
Q  420 caaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
     ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29272309 aaaatgatcatagatatcaatcttactcacagtgttttctcttaaaacacgaactagatcatcctggcagcataacctacttctttctccaggctcttta 29272408  T
Q  520 attgattctt 529  Q
    ||||||||||    
T  29272409 attgattctt 29272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 22023320 - 22023240
Alignment:
Q  38 gtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactca 118  Q
    ||||| ||||||||||||||||| | |||||||||||||| ||| | | ||||||||||||||||||||| ||||||||||    
T  22023320 gtgaagttatttcacttgccttgctcaaaatactagatgatagagactccgataaacatcctttccattttaatacactca 22023240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 95 - 529
Target Start/End: Original strand, 266501 - 266929
Alignment:
Q  95 atcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatctt 194  Q
    |||||||||||||||||||  ||||||| ||| | || | ||| ||||||| ||||||||| ||||||||||||| || ||||||||| |||||||||||    
T  266501 atcctttccatttcaatactttcaaactgcttcgaaggtacttcagacctttagaaaaatgcccattttcaatgacaagtgttttgagatttgtcatctt 266600  T
Q  195 cttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaac-aaagnnnnnn 293  Q
    |||||||||||||||||||| |||||| || | |||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||           
T  266601 cttgaaggcctttcctttctggtctattacaggttccatcgagtggaaattcatatatatcatttcaactttactagttcccttttaacaaaacaaaaaa 266700  T
Q  294 ncatgaatcaaccacaataaaaataagatatagaaatattaacatgtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtccnnnnnnn 393  Q
     ||||||||||| ||||||||||||||||||||| | | | ||||||||       | || |||| ||||||| ||||| |||||||| ||||           
T  266701 acatgaatcaacaacaataaaaataagatatagataaacttacatgtaa-------ataataaatactagtatgagatggtcatattttgtccaaaaaga 266793  T
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||||||| || || ||||    
T  266794 gcaaagtcgtattaaaactaaataacaaattgatcattgatatcaatcttactcacagtgtttttatttaaaacatgaactatatcatcttgacaccata 266893  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||| ||||||||||||||||  ||||||||    
T  266894 acctacttcgttctccaggctctttaggtgattctt 266929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 286
Target Start/End: Original strand, 28125771 - 28126018
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||| | ||||    | |||||| |||| ||||||| |||||| | ||||| |||| ||||    
T  28125771 tgaacttatttcacttgccttgttcaaaaaactagatgatagagacttcgcattatatccttcccatatcaatactctcaaagtacttggaagatacttg 28125870  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     ||| ||  || || || |||||||  || |||| |||||| || |||| ||||||||||||||| ||||  |||  |||||| | || |||||| |||     
T  28125871 ggacttttggagaattgaccattttttataataagtgttttaagatttgacatcttcttgaaggcttttcgattccagtctattatgggttccatagagg 28125970  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaacaaa 286  Q
    |   ||||   |||||||||||||| |||| |||||||||||||||||    
T  28125971 gataattccaatatatcatttcaatgttaccagttcccttttaacaaa 28126018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 116; Significance: 9e-59; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 394 - 529
Target Start/End: Original strand, 1984 - 2119
Alignment:
Q  394 gcaaagtcgtattaaaactaaataaccaaatgatcatagatatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcata 493  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  1984 gcaaagttgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctgacagcata 2083  T
Q  494 acctacttctttctccaggctctttaattgattctt 529  Q
    ||||||||||||||||||||||||||||||||||||    
T  2084 acctacttctttctccaggctctttaattgattctt 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 15375 - 15245
Alignment:
Q  20 gacggaaacaaaatcattgtgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaa 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15375 gacggaaacaaaatcattgtgaagttatttcacttgccttgtttaaaatcctagatgacagacacttcgataaacatcctttccatttcaatacactcaa 15276  T
Q  120 acttcttggtagatgcttgagaccttcagaa 150  Q
    ||| ||||| |||| ||||||||||| ||||    
T  15275 actgcttggaagatacttgagacctttagaa 15245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 114; Significance: 1e-57; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 39 - 280
Target Start/End: Original strand, 11773 - 12014
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| ||||| |||  ||| | ||| | |  ||||||||||| |   |||||||||| |||||||| ||||| |||| ||||    
T  11773 tgaagttatttcacttgccttgcttaaactacatgataatagagactctgataaacatccatgtaatttcaatactctcaaactgcttggaagatacttg 11872  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||   |||     
T  11873 agacctttagaaaaatggccattttcaatgataagcgttttcagtcttgtcatcttcttgaaggcctttcctttcttgtctattacgaattcctcagagg 11972  T
Q  239 ggagattcatttatatcatttcaattttactagttccctttt 280  Q
    ||| |||||| |||||||||||||||||||||||||||||||    
T  11973 ggaaattcatatatatcatttcaattttactagttccctttt 12014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 2875 - 3051
Alignment:
Q  104 atttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggc 203  Q
    |||||||||| |||||||| ||||| |||| ||||||||||| |||||||||| |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  2875 atttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcagtcttgtcatcttcttgaaggc 2974  T
Q  204 ctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttccctttt 280  Q
    |||||||||||||||||| ||| |||||   ||| ||| |||||| |||||||||||||||||||||||||||||||    
T  2975 ctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaattttactagttccctttt 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 335 - 518
Target Start/End: Original strand, 3088 - 3272
Alignment:
Q  335 acatgtaattgagtg-aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcataga 433  Q
    |||||||||| |||| |||| |||| ||||||| ||||| |||||||||||||       |||||||| ||| ||||||||||||| || ||| ||||||    
T  3088 acatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacataga 3187  T
Q  434 tatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttt 518  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||| |  || ||||| |||||||||||||||||||||||    
T  3188 tatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctcttt 3272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 335 - 518
Target Start/End: Original strand, 12051 - 12235
Alignment:
Q  335 acatgtaattgagtg-aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcataga 433  Q
    |||||||||| |||| |||| |||| ||||||| ||||| |||||||||||||       |||||||| ||| ||||||||||||| || ||| ||||||    
T  12051 acatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacataga 12150  T
Q  434 tatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttt 518  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||| |  || ||||| |||||||||||||||||||||||    
T  12151 tatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctcttt 12235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 17991301 - 17991540
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||| ||  ||| || |||||| ||| | || ||   ||||||||||||||||||||| ||||||||  |||| |||| ||||    
T  17991301 tgaaattatttcacttgccttattcgaaaaacaagatgatagagactttgaaggacatcctttccatttcaatactctcaaactatttggaagatacttg 17991400  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||  | || | ||||||| |||||| |    
T  17991401 ggaccttcagaaaaatggtcattttcaatgataagtgttttgagttttttcatcttcttgaaggcctttccattccagactgttacggatttcatggaat 17991500  T
Q  239 ggagattcatttatatcatttcaattttactagttccctt 278  Q
     || |||| | |||||||||||||||||||||||||||||    
T  17991501 cgaaattcgtatatatcatttcaattttactagttccctt 17991540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 792 - 616
Alignment:
Q  104 atttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggc 203  Q
    |||||||||| |||||||| ||||| |||| ||||||||||| |||||||||| |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  792 atttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggtcattttcaatgataagcgttttcagtcttgtcatcttcttgaaggc 693  T
Q  204 ctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttccctttt 280  Q
    |||||||||||||||||| ||| |||||   ||| ||| |||||| ||||||||||||||||| |||||||||||||    
T  692 ctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccctttt 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 335 - 519
Target Start/End: Complemental strand, 578 - 393
Alignment:
Q  335 acatgtaattgagtg-aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcataga 433  Q
    |||||||||| |||| |||| |||| ||||||| ||||| |||||||||||||       |||||||| ||| ||||||||||||| || ||| ||||||    
T  578 acatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacataga 479  T
Q  434 tatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||| || || |||||||||||||||||||| |||||||||    
T  478 tatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctcttta 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 9511 - 9335
Alignment:
Q  104 atttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggc 203  Q
    |||||||||| |||||||| ||||| |||| ||||||||||| |||||||||| |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  9511 atttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcagtcttgtcatcttcttgaaggc 9412  T
Q  204 ctttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttccctttt 280  Q
    |||||||||||||||||| ||| |||||   ||| ||| |||||| ||||||||||||||||| |||||||||||||    
T  9411 ctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccctttt 9335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 335 - 519
Target Start/End: Complemental strand, 9297 - 9111
Alignment:
Q  335 acatgtaattgagtg--aaaagaaatgctagtatcagatgatcatatttagtccnnnnnnngcaaagtcgtattaaaactaaataaccaaatgatcatag 432  Q
    |||||||||| ||||  |||| |||| ||| ||| ||||| |||||||||||||       |||||||| ||| ||||||||||||| || ||| |||||    
T  9297 acatgtaattaagtggaaaaaaaaatactaatatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacatag 9198  T
Q  433 atatcaatcttactcacagtgttttcttttaagacacgaactatatcatcctggcagcataacctacttctttctccaggctcttta 519  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||| || || |||||||||||||||||||| |||||||||    
T  9197 atatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctcttta 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 61598 - 61420
Alignment:
Q  105 tttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcc 204  Q
    ||||| ||| |||||||||||||| |||| |||||||| || |  |  || |||||||||| | ||||| |||||||| | |||||||||||||||||||    
T  61598 tttcattaccctcaaacttcttggaagatacttgagactttgaatatgatagccattttcagtaataaacgttttgaggtgtgtcatcttcttgaaggcc 61499  T
Q  205 tttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaac 283  Q
    ||||| ||||||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||| |||||||||||||    
T  61498 tttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaac 61420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 105 - 282
Target Start/End: Complemental strand, 18075790 - 18075613
Alignment:
Q  105 tttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcc 204  Q
    ||||| ||| |||||||||||||| |||| |||||||| || |  |  || |||||||||| | ||||| |||||||| | |||||||||||||||||||    
T  18075790 tttcattaccctcaaacttcttggaagatacttgagactttgaatatgatagccattttcagtaataaacgttttgaggtgtgtcatcttcttgaaggcc 18075691  T
Q  205 tttcctttcttgtctatcacggattccatggagtggagattcatttatatcatttcaattttactagttcccttttaa 282  Q
    ||||| ||||||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||| ||||||||||||    
T  18075690 tttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaa 18075613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 18677713 - 18677958
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||    ||||| ||||||| ||| | |  ||  ||||||| |||||||||||||| |||||||| ||||| |||| ||||    
T  18677713 tgaaattatttcacttgccttgcaacaaataatagatgatagagactctgaacaacatccattccatttcaatactctcaaactccttggaagatacttg 18677812  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
    ||||||| |||||||  | |||||||||| |||| ||||||||| ||||||||||||||||||| |||||| |||  |||||| ||    ||||| |||     
T  18677813 agacctttagaaaaagagacattttcaataataagtgttttgagatttgtcatcttcttgaaggtctttccattccagtctattaccagatccattgag- 18677911  T
Q  239 ggag-attcatttatatcatttcaattttactagttcccttttaaca 284  Q
    |||| |||||  |||||||| ||||||||||| ||||||||||||||    
T  18677912 ggagaattcagatatatcatctcaattttacttgttcccttttaaca 18677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 18697555 - 18697800
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| |  |||||| |||||| ||| | |  |   ||||||| ||| |||||||||| |||||||| ||||| |||| ||||    
T  18697555 tgaaattatttcacttgccttgctgcaaatacaagatgatagagactctgtagaacatccattcaatttcaatactctcaaactgcttggaagatacttg 18697654  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     || ||| |||||||  | |||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||  |||||| ||||  ||| | |||     
T  18697655 ggatctttagaaaaagagacattttcaataataagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattacgggatccgttgag- 18697753  T
Q  239 ggag-attcatttatatcatttcaattttactagttcccttttaaca 284  Q
    |||| | |||  |||||||| ||||||||||| ||||||||||||||    
T  18697754 ggagaactcagatatatcatctcaattttacttgttcccttttaaca 18697800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 18653631 - 18653876
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||    ||||| ||||||| ||| | |  ||  ||||||| ||| |||||||||| |||||||| ||||| |||| ||||    
T  18653631 tgaaattatttcacttgccttgcagcaaataatagatgatagagactctgaagaacatccattcaatttcaatactctcaaactgcttggaagatacttg 18653730  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     || ||| |||||||  | |||||| ||| |||| ||||||||| |||||||||||||||||||||||||| |||  |||||| ||    ||||| |||     
T  18653731 ggatctttagaaaaagagacatttttaataataagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattaccagatccattgag- 18653829  T
Q  239 ggag-attcatttatatcatttcaattttactagttcccttttaaca 284  Q
    |||| |||||  |||||||| ||||||||||| ||||||||||||||    
T  18653830 ggagaattcagatatatcatctcaattttacttgttcccttttaaca 18653876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 18729649 - 18729894
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| |||||||||||||||||   ||||||  |||||| ||| | |  ||  ||||||| ||| |||||||||| |||||||| ||||| |||| ||||    
T  18729649 tgaaattatttcacttgccttgcagaaaataaaagatgatagagactctgaagaacatccattcaatttcaatactctcaaactgcttggaagatacttg 18729748  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     || ||| |||||||| | |||||| ||| |||| ||||||||| ||||||||||||||||| |||||||| |||  |||||| ||    ||||| |||     
T  18729749 ggatctttagaaaaatagacatttttaataataagtgttttgagatttgtcatcttcttgaaagcctttccattccagtctattaccagatccattgag- 18729847  T
Q  239 ggag-attcatttatatcatttcaattttactagttcccttttaaca 284  Q
    |||| |||||  |||||||| ||||||||||| ||||||||||||||    
T  18729848 ggagaattcagatatatcatctcaattttacttgttcccttttaaca 18729894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 18722227 - 18722472
Alignment:
Q  39 tgaatttatttcacttgccttgtttaaaatactagatgacagacaattcgataaacatcctttccatttcaatacactcaaacttcttggtagatgcttg 138  Q
    |||| ||||||||||||||||| |  ||||| ||||||| ||| |    ||  ||||||  ||| |||||||||| |||||||| ||||| |||| ||||    
T  18722227 tgaaattatttcacttgccttgctgcaaataatagatgatagagacactgaggaacatcgattcaatttcaatactctcaaactgcttggaagatacttg 18722326  T
Q  139 agaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagt 238  Q
     || ||| |||||||  | |||||| ||| |||| ||||||||| |||||||||||||||||||||||||| |||  |||||| ||||  ||| | |||     
T  18722327 ggatctttagaaaaagagacatttttaataataagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattacgggatccgttgagc 18722426  T
Q  239 ggagattcatttatatcatttcaattttactagttcccttttaaca 284  Q
    |   |||||  |||||||| ||||||||||| ||||||||||||||    
T  18722427 gagaattcagatatatcatctcaattttacttgttcccttttaaca 18722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 92 - 284
Target Start/End: Original strand, 18687820 - 18688012
Alignment:
Q  92 aacatcctttccatttcaatacactcaaacttcttggtagatgcttgagaccttcagaaaaatggccattttcaatgataaatgttttgagttttgtcat 191  Q
    ||||||| ||| |||||||||| |||||||| ||||| |||| |||| || ||| || ||||  | |||||| ||| |||| ||||||||| ||||||||    
T  18687820 aacatccattcaatttcaatactctcaaactgcttggaagatacttgggatctttagtaaaagagacatttttaataataagtgttttgagatttgtcat 18687919  T
Q  192 cttcttgaaggcctttcctttcttgtctatcacggattccatggagtggag-attcatttatatcatttcaattttactagttcccttttaaca 284  Q
    ||||||||| |||||||| |||  |||||| ||    ||||| ||| |||| |||||  |||||||| ||||||||||| ||||||||||||||    
T  18687920 cttcttgaaagcctttccattccagtctattaccagatccattgag-ggagaattcagatatatcatctcaattttacttgttcccttttaaca 18688012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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