View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3090_high_42 (Length: 321)

Name: NF3090_high_42
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3090_high_42
NF3090_high_42
[»] chr8 (26 HSPs)
chr8 (10-259)||(42260831-42261081)
chr8 (22-108)||(2968580-2968667)
chr8 (10-75)||(35779060-35779125)
chr8 (10-107)||(7579837-7579934)
chr8 (10-107)||(24791150-24791247)
chr8 (23-107)||(10338817-10338901)
chr8 (59-206)||(19384292-19384441)
chr8 (23-107)||(30026875-30026959)
chr8 (23-107)||(39067684-39067768)
chr8 (48-107)||(9501640-9501698)
chr8 (23-97)||(14600693-14600768)
chr8 (23-98)||(39092960-39093035)
chr8 (16-97)||(3204744-3204826)
chr8 (23-107)||(2234465-2234549)
chr8 (22-101)||(6843067-6843144)
chr8 (10-107)||(12329676-12329774)
chr8 (23-82)||(26673657-26673715)
chr8 (48-107)||(31202508-31202566)
chr8 (48-107)||(31308198-31308256)
chr8 (56-107)||(41361782-41361832)
chr8 (10-107)||(2025191-2025288)
chr8 (22-75)||(7281729-7281783)
chr8 (26-108)||(30261805-30261887)
chr8 (50-108)||(32778973-32779031)
chr8 (48-97)||(11161941-11161990)
chr8 (10-97)||(31407730-31407818)
[»] chr1 (35 HSPs)
chr1 (22-131)||(32301364-32301473)
chr1 (23-199)||(18889031-18889209)
chr1 (22-206)||(38783016-38783202)
chr1 (16-108)||(29551730-29551822)
chr1 (10-97)||(45750537-45750625)
chr1 (25-108)||(34899029-34899112)
chr1 (10-107)||(12871671-12871768)
chr1 (16-88)||(50107895-50107967)
chr1 (10-107)||(20411623-20411720)
chr1 (50-108)||(28399336-28399394)
chr1 (23-107)||(424278-424362)
chr1 (24-107)||(29726584-29726667)
chr1 (16-107)||(32784158-32784249)
chr1 (10-97)||(51418072-51418160)
chr1 (48-107)||(4882372-4882430)
chr1 (10-108)||(14265333-14265431)
chr1 (23-93)||(15791262-15791333)
chr1 (48-107)||(27534749-27534807)
chr1 (10-107)||(15391226-15391323)
chr1 (10-107)||(42490943-42491040)
chr1 (48-97)||(10627059-10627108)
chr1 (23-107)||(44517197-44517281)
chr1 (8-75)||(15312581-15312646)
chr1 (22-82)||(31427107-31427167)
chr1 (50-97)||(3232847-3232894)
chr1 (22-108)||(43503871-43503957)
chr1 (33-127)||(45425469-45425564)
chr1 (176-211)||(50108083-50108118)
chr1 (10-107)||(13488510-13488607)
chr1 (55-97)||(18343673-18343715)
chr1 (10-107)||(28678104-28678201)
chr1 (27-107)||(37822336-37822416)
chr1 (48-108)||(9298427-9298487)
chr1 (63-99)||(30678313-30678349)
chr1 (10-89)||(33938987-33939067)
[»] chr3 (32 HSPs)
chr3 (17-127)||(32408789-32408900)
chr3 (10-208)||(5327459-5327658)
chr3 (22-108)||(4219228-4219314)
chr3 (10-108)||(106017-106116)
chr3 (10-108)||(42167995-42168093)
chr3 (16-107)||(2147776-2147868)
chr3 (10-107)||(48652422-48652519)
chr3 (23-107)||(54239013-54239097)
chr3 (47-107)||(34960878-34960937)
chr3 (48-107)||(40013293-40013351)
chr3 (10-107)||(11819133-11819230)
chr3 (10-107)||(14585512-14585609)
chr3 (49-107)||(34103739-34103796)
chr3 (23-108)||(55090578-55090663)
chr3 (23-107)||(35174754-35174838)
chr3 (23-107)||(36691794-36691878)
chr3 (10-97)||(32080736-32080824)
chr3 (10-97)||(33637462-33637550)
chr3 (63-131)||(33937416-33937483)
chr3 (48-108)||(36624715-36624774)
chr3 (10-89)||(53402688-53402768)
chr3 (10-81)||(33605218-33605289)
chr3 (48-107)||(41868315-41868373)
chr3 (48-107)||(48400949-48401007)
chr3 (48-107)||(49628108-49628166)
chr3 (49-107)||(13701994-13702051)
chr3 (10-107)||(22485015-22485112)
chr3 (10-107)||(31270376-31270473)
chr3 (23-107)||(3312493-3312577)
chr3 (48-97)||(38527322-38527371)
chr3 (50-107)||(40883891-40883947)
chr3 (23-98)||(37451797-37451872)
[»] chr2 (39 HSPs)
chr2 (23-108)||(17792522-17792607)
chr2 (23-199)||(11581116-11581294)
chr2 (23-105)||(20607301-20607382)
chr2 (10-100)||(15028285-15028375)
chr2 (10-107)||(34416736-34416832)
chr2 (23-127)||(44150028-44150132)
chr2 (10-107)||(12704737-12704834)
chr2 (10-107)||(13740634-13740731)
chr2 (10-107)||(31908790-31908887)
chr2 (10-107)||(38535279-38535376)
chr2 (16-62)||(40039289-40039335)
chr2 (22-103)||(20598623-20598703)
chr2 (23-107)||(27095755-27095839)
chr2 (23-108)||(32015273-32015357)
chr2 (10-97)||(9978643-9978731)
chr2 (10-97)||(20561106-20561194)
chr2 (10-96)||(7072922-7073009)
chr2 (48-107)||(10287019-10287077)
chr2 (23-98)||(27666270-27666344)
chr2 (48-107)||(28231110-28231168)
chr2 (50-108)||(6431402-6431460)
chr2 (10-107)||(25067902-25067999)
chr2 (21-127)||(27665648-27665752)
chr2 (10-108)||(38450286-38450384)
chr2 (124-204)||(7582181-7582261)
chr2 (23-107)||(28261875-28261959)
chr2 (10-97)||(12891093-12891181)
chr2 (28-127)||(15261405-15261504)
chr2 (48-108)||(17116415-17116475)
chr2 (10-97)||(32314501-32314589)
chr2 (10-97)||(41797653-41797741)
chr2 (48-107)||(33012127-33012185)
chr2 (48-107)||(43474141-43474199)
chr2 (50-108)||(17767566-17767624)
chr2 (10-107)||(35333555-35333652)
chr2 (10-122)||(13548874-13548986)
chr2 (20-107)||(4604291-4604378)
chr2 (10-97)||(4739388-4739476)
chr2 (10-97)||(5754347-5754435)
[»] chr6 (20 HSPs)
chr6 (18-97)||(31801213-31801292)
chr6 (23-127)||(9044068-9044171)
chr6 (11-108)||(8508191-8508288)
chr6 (10-104)||(8978714-8978808)
chr6 (23-107)||(12481357-12481441)
chr6 (10-97)||(4393829-4393917)
chr6 (48-107)||(2304823-2304881)
chr6 (23-97)||(19402795-19402870)
chr6 (23-107)||(15590066-15590150)
chr6 (8-107)||(8693629-8693728)
chr6 (10-108)||(15470211-15470307)
chr6 (10-107)||(35038748-35038841)
chr6 (10-108)||(29284800-29284899)
chr6 (10-107)||(4921855-4921952)
chr6 (11-107)||(2488188-2488284)
chr6 (23-107)||(21507795-21507879)
chr6 (23-107)||(23654300-23654384)
chr6 (10-97)||(6296223-6296311)
chr6 (10-97)||(6303033-6303121)
chr6 (10-108)||(15175861-15175957)
[»] chr5 (28 HSPs)
chr5 (23-122)||(374317-374416)
chr5 (20-104)||(26240663-26240747)
chr5 (10-96)||(14534959-14535045)
chr5 (10-108)||(25487656-25487755)
chr5 (10-107)||(17331378-17331475)
chr5 (10-107)||(27241114-27241211)
chr5 (10-107)||(28040679-28040776)
chr5 (10-107)||(33164442-33164539)
chr5 (23-107)||(39179815-39179899)
chr5 (22-107)||(6635300-6635385)
chr5 (10-107)||(12891726-12891823)
chr5 (10-107)||(17096213-17096310)
chr5 (10-107)||(34431110-34431207)
chr5 (23-107)||(178091-178177)
chr5 (23-107)||(29097839-29097923)
chr5 (23-153)||(17523510-17523641)
chr5 (48-107)||(3740407-3740465)
chr5 (48-107)||(6281094-6281152)
chr5 (23-97)||(17687264-17687339)
chr5 (48-107)||(17699603-17699661)
chr5 (11-97)||(42396487-42396574)
chr5 (23-104)||(585860-585942)
chr5 (11-108)||(17522828-17522925)
chr5 (10-91)||(18653847-18653929)
chr5 (11-107)||(20483236-20483332)
chr5 (50-107)||(32347729-32347785)
chr5 (8-107)||(7150866-7150966)
chr5 (64-108)||(26905667-26905711)
[»] chr4 (32 HSPs)
chr4 (10-108)||(12717091-12717190)
chr4 (23-107)||(46829457-46829541)
chr4 (16-107)||(8517436-8517527)
chr4 (10-107)||(24825699-24825796)
chr4 (10-107)||(25658217-25658314)
chr4 (10-107)||(39837645-39837742)
chr4 (10-107)||(44757016-44757113)
chr4 (15-107)||(7060374-7060466)
chr4 (23-107)||(30202088-30202172)
chr4 (16-108)||(51958399-51958492)
chr4 (48-108)||(6882005-6882064)
chr4 (23-97)||(5814406-5814481)
chr4 (48-107)||(6911730-6911788)
chr4 (48-107)||(29268790-29268848)
chr4 (10-107)||(11210287-11210384)
chr4 (10-107)||(22757144-22757241)
chr4 (23-107)||(7083803-7083887)
chr4 (23-107)||(26674422-26674506)
chr4 (64-108)||(3159091-3159135)
chr4 (26-98)||(24789250-24789321)
chr4 (26-98)||(24818938-24819009)
chr4 (10-58)||(31932361-31932409)
chr4 (24-107)||(50801267-50801350)
chr4 (10-96)||(626523-626610)
chr4 (56-107)||(26742484-26742534)
chr4 (56-107)||(43244402-43244452)
chr4 (48-107)||(45351083-45351141)
chr4 (48-107)||(45360562-45360620)
chr4 (10-107)||(24611773-24611870)
chr4 (10-107)||(38944122-38944218)
chr4 (11-107)||(27090774-27090870)
chr4 (10-75)||(31994111-31994175)
[»] chr7 (34 HSPs)
chr7 (23-108)||(39990162-39990247)
chr7 (23-107)||(43847120-43847204)
chr7 (10-107)||(10094491-10094588)
chr7 (11-108)||(14811270-14811367)
chr7 (11-108)||(15258265-15258362)
chr7 (10-107)||(45457530-45457627)
chr7 (22-97)||(26161039-26161115)
chr7 (16-127)||(27705050-27705161)
chr7 (10-107)||(1281111-1281208)
chr7 (10-107)||(42603743-42603840)
chr7 (18-127)||(43256532-43256641)
chr7 (23-100)||(6646578-6646655)
chr7 (23-127)||(14810633-14810737)
chr7 (23-127)||(15257628-15257732)
chr7 (23-107)||(24320210-24320294)
chr7 (18-203)||(5237905-5238092)
chr7 (10-93)||(10574444-10574528)
chr7 (16-107)||(28664892-28664983)
chr7 (23-75)||(37714559-37714611)
chr7 (10-109)||(10623847-10623946)
chr7 (55-107)||(15674632-15674683)
chr7 (10-89)||(36719526-36719606)
chr7 (11-97)||(4621342-4621429)
chr7 (48-107)||(11833069-11833127)
chr7 (57-108)||(29352294-29352345)
chr7 (18-108)||(33476634-33476725)
chr7 (135-202)||(35306575-35306642)
chr7 (48-107)||(39532988-39533046)
chr7 (50-107)||(21990712-21990768)
chr7 (48-97)||(32643071-32643120)
chr7 (23-107)||(32740803-32740887)
chr7 (55-107)||(5684415-5684466)
chr7 (55-107)||(5709465-5709516)
chr7 (55-107)||(42644726-42644777)
[»] scaffold1379 (1 HSPs)
scaffold1379 (10-107)||(1060-1157)
[»] scaffold0886 (1 HSPs)
scaffold0886 (10-98)||(3715-3801)
[»] scaffold0294 (1 HSPs)
scaffold0294 (10-108)||(4041-4139)
[»] scaffold0321 (1 HSPs)
scaffold0321 (10-107)||(7098-7195)
[»] scaffold0238 (1 HSPs)
scaffold0238 (22-108)||(15666-15750)
[»] scaffold0056 (1 HSPs)
scaffold0056 (10-107)||(74214-74311)
[»] scaffold0312 (1 HSPs)
scaffold0312 (23-107)||(6187-6271)
[»] scaffold0432 (1 HSPs)
scaffold0432 (10-107)||(2392-2488)
[»] scaffold1350 (1 HSPs)
scaffold1350 (48-107)||(1624-1682)
[»] scaffold0001 (1 HSPs)
scaffold0001 (48-107)||(404271-404329)
[»] scaffold0536 (1 HSPs)
scaffold0536 (10-107)||(2952-3049)


Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 42261081 - 42260831
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatttt 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  42261081 gcacaaagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaagaaaatcaaaaatatgtgaaaatcacttatttt 42260982  T
Q  110 gctaatagagaaataaaa-caatctcaaggggtaattttgggtcaaagtttacctaaatcaccaatttttggtagatcaagaagaagaaaagttgtgatg 208  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42260981 gctaatagagaaataaaaacaatctcgaggggtaattttgggtcaaagtttacctaaatcaccaatttttggtagatcaagaagaagaaaagttgtgacg 42260882  T
Q  209 actctagtttggaaaaggggaaactaagagaggaaatatattaatgtagtg 259  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  42260881 actctagtttgggaaagaggaaactaagagaggaaatatattaatgtagtg 42260831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 2968667 - 2968580
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||| ||||||||| ||||  ||||||  ||||||| |||||||||||| ||||||  ||||||||||||||||||||||||    
T  2968667 aaaatcaaaacaaacaaagttgtgcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttattt 2968580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 35779060 - 35779125
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaa 75  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||    
T  35779060 gcacaaagacggaaaatcaaaataaacaaagtcgtgctagacgacaaaaacacaaaaacaaacgaa 35779125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 7579837 - 7579934
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  7579837 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 7579934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 24791150 - 24791247
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||  ||||||||||||    
T  24791150 gcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-taaatcacttatt 24791247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 10338817 - 10338901
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  10338817 aaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 10338901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 206
Target Start/End: Complemental strand, 19384441 - 19384292
Alignment:
Q  59 tcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaataaaacaatctc-aaggggtaattttgggtcaaagt 157  Q
    |||| |||| ||||| | |||| | |||||||||||||||| |||| |||  |||| ||||||| ||||  || || ||||||| ||||||||||||| |    
T  19384441 tcacaaaaataaacggaagaaagctgaaaatatgtgaaaattacttgtttaactaaaagagaaagaaaaacatttcgaaggggttattttgggtcaaaat 19384342  T
Q  158 ttacct-aaatcaccaatttttggtagatcaagaagaagaaaagttgtga 206  Q
    | || | ||||||||  | ||||||||||||| |||||||||| ||||||    
T  19384341 tgactttaaatcacccttatttggtagatcaaaaagaagaaaaattgtga 19384292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 30026875 - 30026959
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  30026875 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 30026959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 39067684 - 39067768
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| | | ||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  39067684 aaatcaaaacaaacatagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 39067768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 9501698 - 9501640
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  9501698 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 9501640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 14600693 - 14600768
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||||||| ||||| |||||| | | ||||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  14600693 aaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 14600768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 39092960 - 39093035
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa 98  Q
    |||||||||||||||||||||||  ||| ||||| ||||  ||||||||| || |||||| |||||||| ||||||    
T  39092960 aaatcaaaataaacaaagtcgtgtgagatgatgatatcataaaaacaaacaaacgaaaactgaaaatatatgaaaa 39093035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 3204744 - 3204826
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||| ||||||||| ||||| |||||| |  |||||| ||||||||  ||||||||||| |||||| ||||||||||||||    
T  3204744 agacgagaaatcaaaacaaacagagtcgttcagagacgacgaaatcacataaacaaacgaaagaaaacagaaaatatgtgaaa 3204826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 2234465 - 2234549
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  2234465 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 2234549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 6843067 - 6843144
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatca 101  Q
    |||||||||||||||  || |||||||||| |||||||||| |||| ||||||| |||||  |||||| | |||||||||    
T  6843067 aaaatcaaaataaac--agacgtgctagactatgaaatcacaaaaataaacgaaagaaaagtgaaaatttatgaaaatca 6843144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12329774 - 12329676
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaa-cgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||| |||| |||||| ||||||||||| ||||||||||||    
T  12329774 gcacaaagacgggaaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 12329676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 26673657 - 26673715
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaac 82  Q
    |||||||||||||||||||| |||||||||| | |||||  |||||||||||| ||||||    
T  26673657 aaatcaaaataaacaaagtcttgctagacgacg-aatcataaaaacaaacgaaagaaaac 26673715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 31202566 - 31202508
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  31202566 agacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtg-aaatcacttatt 31202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 31308256 - 31308198
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  31308256 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 31308198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 41361832 - 41361782
Alignment:
Q  56 aaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  41361832 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 41361782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 2025191 - 2025288
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||||||||||| ||||| | |||| |  |||||| |||||||| |||| |||||||  ||||| ||||| ||||| ||||||||||||    
T  2025191 gcacaaagacgaaaaatcaaaacaaacagaatcgttcagagacgacgaaatcacaaaaataaacgaaataaaacagaaaacatgtg-aaatcacttatt 2025288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 7281783 - 7281729
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaa 75  Q
    |||||||||||||||| |||| ||| | |||||||||||||| ||||||||||||    
T  7281783 aaaatcaaaataaacagagtcatgcaaagacgatgaaatcacaaaaacaaacgaa 7281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 30261887 - 30261805
Alignment:
Q  26 tcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||| || |||||||||||  || || |||||||  ||||||||||| ||||||  |||| | |||||||||||||||||    
T  30261887 tcaaaatgaataaagtcgtgctttactataaaatcacataaacaaacgaaagaaaacaaaaaaaaagtgaaaatcacttattt 30261805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 32778973 - 32779031
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||||| |||| ||||||| |||||| ||||||||||| ||||| |||||||    
T  32778973 acgacgaaatcacaaaaataaacgaaagaaaactgaaaatatgtggaaatctcttattt 32779031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 11161990 - 11161941
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||| |||||||| |||||||||||| |||||| ||||| ||||||||    
T  11161990 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaagatgtgaaa 11161941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 31407730 - 31407818
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||  |||||||||||| ||||||  |||||||||||||    
T  31407730 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaatatgtgaaa 31407818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 32301473 - 32301364
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaa 121  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||  || ||||||||||||||||||||||||||| ||||||    
T  32301473 aaaattaaaataaacaaagtcgtgctagacgatgaaatcacaaaaacaaacgaaagaatactaaagatatgtgaaaatcacttattttgctaaaagagaa 32301374  T
Q  122 ataaaacaat 131  Q
    || |||||||    
T  32301373 attaaacaat 32301364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 18889209 - 18889031
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaa 122  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||  |||| ||||||||||||| |||||||||||| |||||||    
T  18889209 aaatcaaaataaacaaagttatgctagacgatgaaatcaccaaaacaaatgaaagaaaattgaaagtatgtgaaaatcatttattttgctaaaagagaaa 18889110  T
Q  123 t-aaaacaatctca-aggggtaattttgggtcaaagtttac-ctaaatcaccaatttttggtagatcaagaagaagaaaa 199  Q
    | |||||||| ||| |||||| ||||| || |||| || || ||||||||||  | |||||||||| ||| |||||||||    
T  18889109 taaaaacaat-tcagaggggtgattttcggccaaaattgactctaaatcacccctctttggtagataaaggagaagaaaa 18889031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 38783202 - 38783016
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaa 121  Q
    |||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||  |||| ||||||    
T  38783202 aaaatcaaaataaacaaagttgtgctggacgacgaaatcacaaaaacgaacgaaggaaaactgaaaatatgttaaaatcacttatttaactaaaagagaa 38783103  T
Q  122 a-taaaacaatctcaaggggtaattttgggtcaaagtttacc-taaatcaccaatttttggtagatcaagaagaagaaaagttgtga 206  Q
    |  ||||||||   || |  | ||||  | ||||| || ||| |||||||||  ||||||||||||||| ||||||||| |||||||    
T  38783102 agaaaaacaattcaaatgaatgatttcagatcaaaattaaccttaaatcacccctttttggtagatcaataagaagaaaggttgtga 38783016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 29551730 - 29551822
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||| |||| || || ||| |||||||||| ||||||| ||||||    
T  29551730 agacgaaaaatcaaaataaacaaagtcgtgctagacgccgaaatcacaaaaataaaccaaagataactgaaaatatgtcaaaatcatttattt 29551822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 45750625 - 45750537
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||| ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| ||||||| |||||||||||||    
T  45750625 gcacaaagacgataaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaaccaaaaatatgtgaaa 45750537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 34899112 - 34899029
Alignment:
Q  25 atcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||||||||||||||||| || |||||||||| ||| || ||||| |||||| ||||||||  | |||||||||||||    
T  34899112 atcaaaataaacaaagtcgtgctatacaatgaaatcacaaaatcatacgaaagaaaactgaaaatatacggaaatcacttattt 34899029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12871768 - 12871671
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||||| | ||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  12871768 gcacaaagacgggaaatcaaaacaaacagagtcgtgcaaagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttatt 12871671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 50107895 - 50107967
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaa 88  Q
    ||||||||||| |||||||||||| |||||  |||||| |||||||| |||||||||||| |||||| |||||    
T  50107895 agacgaaaaattaaaataaacaaaatcgtgtgagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa 50107967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 20411720 - 20411623
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| ||||| ||||||    ||||||||||||| | |||||||||||| |||||| ||||||||||| ||||||||||||    
T  20411720 gcacaaagacgagaaatcaaaacaaacagagtcgtttagagacgatgaaatcccaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 20411623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 28399336 - 28399394
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||||| |||||||||||| ||||||  ||||||||||||||||||||||||    
T  28399336 acgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttattt 28399394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 424278 - 424362
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  424278 aaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 424362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 29726584 - 29726667
Alignment:
Q  24 aatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| ||||  ||||||||  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  29726584 aatcaaaacaaaccgagtcgtgcggagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 29726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 32784249 - 32784158
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||||| ||||| |||||| |  |||||| |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||    
T  32784249 agacggaaaatcaaaagaaacatagtcgttcagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtg-aaatcacttatt 32784158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 51418160 - 51418072
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| ||||| |||||||||| ||||| |||||| |  |||||| ||||| || |||||||||||| |||||| ||||||||||||||    
T  51418160 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 51418072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 4882372 - 4882430
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  4882372 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 4882430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 14265431 - 14265333
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| ||||| |||||||||| ||||| |||||| |  |||||| |||||||| |||||| ||| | |||||| ||||||||||| |||||||||||||    
T  14265431 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacatacgtaagaaaacagaaaatatgtg-aaatcacttattt 14265333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 15791262 - 15791333
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgt 93  Q
    ||||||||| ||||| |||||| |  ||||||||||||||| |||||||||||| |||||| ||||||||||    
T  15791262 aaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt 15791333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 27534807 - 27534749
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  27534807 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 27534749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 15391226 - 15391323
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||| ||||||| |  |||||| |||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||    
T  15391226 gcacaaagacgggaaatcaaaacaaacgaagtcgtccagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaacatgtg-aaatcacttatt 15391323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 42491040 - 42490943
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||| ||||||| ||||||||||||    
T  42491040 gcacaaagacgggaaatcaaaacaaacagagtcgtacagagacgacgaaatcacaaaaacaaacgaaagaaaactgaagatatgtg-aaatcacttatt 42490943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 10627108 - 10627059
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  10627108 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 10627059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 44517281 - 44517197
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||| | ||||||||||| ||||||||||||    
T  44517281 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaagcagaaaatatgtg-aaatcacttatt 44517197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 15312581 - 15312646
Alignment:
Q  8 cagcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaa 75  Q
    ||||||| ||| |||||||||||||||| ||||||||| ||||||| ||||| |  ||||||||||||    
T  15312581 cagcacaaagatgaaaaatcaaaataaataaagtcgtgttagacgacgaaataa--aaaacaaacgaa 15312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 31427107 - 31427167
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaac 82  Q
    ||||| ||||||||||||| || | || | |||||||||||||||||||||||| ||||||    
T  31427107 aaaataaaaataaacaaagacgcgttatatgatgaaatcaccaaaacaaacgaaagaaaac 31427167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 3232894 - 3232847
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  3232894 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 3232847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 43503957 - 43503871
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||| ||||||||||||||| ||| || ||||||| || || |||| || || ||| ||||||||||||||| |||||||||    
T  43503957 aaaatcaaaagaaacaaagtcgtgctaagatgaagaaatca-cataaaaaacaaaagataactgaaaatatgtgaaaaacacttattt 43503871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 45425469 - 45425564
Alignment:
Q  33 aaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaataaaa 127  Q
    ||||| |||||||||| ||||| |||||||| ||||| |||||| |||||  ||||||| ||| | |||||||||||  |||| ||||||| ||||    
T  45425469 aaacagagtcgtgctaagacgacgaaatcacaaaaactaacgaaagaaaattgaaaatacgtggatatcacttatttaactaaaagagaaagaaaa 45425564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 50108083 - 50108118
Alignment:
Q  176 tttggtagatcaagaagaagaaaagttgtgatgact 211  Q
    |||||||||||||||| |||||||||||||||||||    
T  50108083 tttggtagatcaagaaaaagaaaagttgtgatgact 50108118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 13488510 - 13488607
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||  |||||||| |||||||||||| |||||  |||||||||| |||||||||||||    
T  13488510 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacggcgaaatcacaaaaacaaacgaaagaaaatagaaaatatgt-aaaatcacttatt 13488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 18343715 - 18343673
Alignment:
Q  55 gaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||||| |||||||||||| |||||| ||||||||||||||    
T  18343715 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 18343673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 28678104 - 28678201
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctag-acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| ||||| |||||| | |  |||| |||||||| |||||||||||| |||||   |||||||||| ||||||||||||    
T  28678104 gcacaaagacgagaaatcaaaacaaacagagtcgttcaaatacgacgaaatcacaaaaacaaacgaaagaaaatataaaatatgtg-aaatcacttatt 28678201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 37822336 - 37822416
Alignment:
Q  27 caaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||||||| |  |||||| |||||||| |||||||| ||| |||||  ||||||||||| ||||||||||||    
T  37822336 caaaacaaacaaagtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaatagaaaatatgtg-aaatcacttatt 37822416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 9298427 - 9298487
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||||||| |||||||||||| ||||||  |||||| ||| |||||| ||||||    
T  9298427 agacaatgaaatcacaaaaacaaacgaaagaaaacttaaaatacgtggaaatcaattattt 9298487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 30678349 - 30678313
Alignment:
Q  63 caaaacaaacgaaggaaaaccgaaaatatgtgaaaat 99  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  30678349 caaaacaaacgaaagaaaactgaaaatatgtgaaaat 30678313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 33938987 - 33939067
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaat 89  Q
    ||||| ||||| |||||||||| ||||| |||||| |  ||| || |||||||| |||||||||||| |||||| ||||||    
T  33938987 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaat 33939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 32408789 - 32408900
Alignment:
Q  17 gacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaa-atatgtgaaaatcacttattttgctaat 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||||| ||||     
T  32408789 gacgagaaatgaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacaaaagaaaaccgaaagatatgtgaaagtcacttatttttctaaa 32408888  T
Q  116 agagaaataaaa 127  Q
    ||||||| ||||    
T  32408889 agagaaagaaaa 32408900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 5327459 - 5327658
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatttt 109  Q
    ||||| ||||| |||||||||||||||||||| ||||||||| | |||||||| |||||||||||| |||||| |||||| ||||| ||||||||||||     
T  5327459 gcacaaagacggaaaatcaaaataaacaaagttgtgctagacaacgaaatcacaaaaacaaacgaaagaaaactgaaaatttgtgataatcacttattta 5327558  T
Q  110 gctaatagagaaa-taaaacaatctcaaggggtaattttgggtcaaagttta-cctaaatcaccaatttttggtagatcaagaagaagaaaagttgtgat 207  Q
     || | |||||||  |||||||| |  |||||| |||||  |||||| || | || | |||| |  | ||||||||||||||||||| ||||||||||||    
T  5327559 actgaaagagaaagaaaaacaatttgcaggggtgattttaagtcaaaattaaccccagatcatctctctttggtagatcaagaagaa-aaaagttgtgat 5327657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 4219314 - 4219228
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||| |||||||||||||||||||||||||    
T  4219314 aaaataaaaataaacaaaatcgtgttagacgacgaaatcataaaaacaaacgaaagaaaactgaaaatatgtgaaaatcacttattt 4219228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 106017 - 106116
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| ||||| |||||||||||||||| ||||||||  ||||||  ||||||| |||||||||||| ||||||  ||||||||||||||||||||||||    
T  106017 gcacaaagacggaaaatcaaaataaacagagtcgtgcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttattt 106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 42167995 - 42168093
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaa-aatcacttattt 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||| |||| | ||||||| ||||| |||||| |||||    
T  42167995 gcacagagacgaaaaatcaaaataaacaaagtcgtgatagacgacaaaatca-caaaaccaacgaaagaaagctgaaaatacgtgaataatcacctattt 42168093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 2147868 - 2147776
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| ||||||||| ||||| ||||||||  |||||| |||||||| |||||||| ||| |||||| ||||||||||| ||||||||||||    
T  2147868 agacgagaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaatgaaagaaaactgaaaatatgtggaaatcacttatt 2147776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 48652422 - 48652519
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| ||||||||||||    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  48652422 gcacaaagacggaaaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 48652519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 54239013 - 54239097
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  54239013 aaatcaaaacaaacaaagtcgttcatcgacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 54239097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 34960878 - 34960937
Alignment:
Q  47 tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  34960878 tagacgatgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 34960937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 40013293 - 40013351
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  40013293 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 40013351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 11819230 - 11819133
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| ||||| |||||| |  |||||| |||||||| |||||||| ||| ||||||  |||||||||| ||||||||||||    
T  11819230 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaacataaaatatgtg-aaatcacttatt 11819133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 14585609 - 14585512
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||    
T  14585609 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgaggaaatcacaaaaacaaacaaaagaaaacagaaaatatgtg-aaatcacttatt 14585512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 34103739 - 34103796
Alignment:
Q  49 gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  34103739 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 34103796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 55090578 - 55090663
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||||| |||||||||||| |  |||||| | |||||| |||||||| ||| |||||| ||||||||||| |||||||||||||    
T  55090578 aaatcaaaacaaacaaagtcgttcagagacgacggaatcacaaaaacaaatgaaagaaaacagaaaatatgtg-aaatcacttattt 55090663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 35174838 - 35174754
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  35174838 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 35174754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 36691794 - 36691878
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| | |||| ||||||||||| ||||||||||||    
T  36691794 aaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaaggaaacagaaaatatgtg-aaatcacttatt 36691878  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 32080736 - 32080824
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| |  ||||||  ||||||| |||||||||||| |||||| ||||||||||||||    
T  32080736 gcacaaagacgtgaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 32080824  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 33637550 - 33637462
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||||||||||    |||||| |||||||| |||| ||||||| |||||| ||||||||||||||    
T  33637550 gcacaaagacgggaaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaa 33637462  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 33937416 - 33937483
Alignment:
Q  63 caaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaataaaacaat 131  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||| |||| ||| ||| ||||||||    
T  33937416 caaaacaaacgaaagaaagctgaaaatacgtgaaaatcacttattttactaaaaga-aaaaaaaacaat 33937483  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 36624715 - 36624774
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||| |||||||| ||||||||| || |||||| ||||||||||| |||||||||||||    
T  36624715 agacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtg-aaatcacttattt 36624774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 53402768 - 53402688
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaat 89  Q
    ||||| |||||  ||||||||| |||||||||||| |  ||||||||||||||| |||||||||||| |||| | ||||||    
T  53402768 gcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaagcagaaaat 53402688  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 33605218 - 33605289
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaa 81  Q
    ||||| |||||| |||||||||||||||||| |||  |||| ||| ||||||| ||||||||| || |||||    
T  33605218 gcacaaagacgagaaatcaaaataaacaaagccgttttagaagataaaatcacgaaaacaaactaaagaaaa 33605289  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 41868315 - 41868373
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||    
T  41868315 agacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 41868373  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 48401007 - 48400949
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  48401007 agacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 48400949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 49628108 - 49628166
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  49628108 agacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 49628166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 13701994 - 13702051
Alignment:
Q  49 gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||| |||||||| ||| |||||| ||||||||||| ||||||||||||    
T  13701994 gacgacgaaatcacaaaaacaaatgaaagaaaacagaaaatatgtg-aaatcacttatt 13702051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 22485112 - 22485015
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| | | || || |||||||| |||||||||||| |||||| ||||||||| | ||||||||||||    
T  22485112 gcacaaagacgggaaatcaaaacaaacagagtcgttcaaagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgcg-aaatcacttatt 22485015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 31270473 - 31270376
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| ||||| || |||||||||||| ||||||  |||||||||| ||||||||||||    
T  31270473 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaattacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 31270376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 3312577 - 3312493
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||  ||||||||  ||| |||||||| || |||||||||||| ||||||  |||||||||| ||||||||||||    
T  3312577 aaatcaaaagaaactgagtcgtgcagagatgatgaaataacaaaaacaaacgaaagaaaacttaaaatatgtg-aaatcacttatt 3312493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 38527371 - 38527322
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||| |||||||  |||||||||||| |||||| ||||||||||||||    
T  38527371 agacgacgaaatcataaaaacaaacgaaagaaaacagaaaatatgtgaaa 38527322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 40883891 - 40883947
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| |||||||| |||||||||||| |||||| ||||||| ||| ||||||||||||    
T  40883891 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtg-aaatcacttatt 40883947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 37451872 - 37451797
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaa-ccgaaaatatgtgaaaa 98  Q
    |||||||| ||||||||||| || ||||||| ||||||| |||||| |||||| ||||| |  ||||||||||||||    
T  37451872 aaatcaaattaaacaaagtcatgttagacgacgaaatca-caaaaccaacgaaagaaaagctaaaaatatgtgaaaa 37451797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 9e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 17792607 - 17792522
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||| ||||||||||||||||| |||||||    
T  17792607 aaatcaaaataaacaaagtcgtgctagatgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaaatcgcttattt 17792522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 11581116 - 11581294
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaa 122  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||| || ||||||  ||||||| ||||||||||||||||  | || |||||||    
T  11581116 aaatcaaaataaacaaagccgtgctagacgacgaaatcacaaaaacaaaccaaagaaaactaaaaatatatgaaaatcacttatttaacaaaaagagaaa 11581215  T
Q  123 -taaaacaatctcaaggggtaattttgggtcaaagtttac-ctaaatcaccaatttttggtagatcaagaagaagaaaa 199  Q
      ||||||||   ||| ||| ||||||||||||| || || | ||||||||  | ||| ||||||||| ||||| ||||    
T  11581216 gaaaaacaattcgaagaggttattttgggtcaaaattaactccaaatcacccttctttagtagatcaaaaagaataaaa 11581294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 20607301 - 20607382
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcactta 105  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  20607301 aaatcaaaataa-caaagtcgtgctagatgaagaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaaatcactta 20607382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 15028285 - 15028375
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatc 100  Q
    ||||| |||||| ||| ||||||||| | ||||| ||||||||||||||||   |||||||||||| ||| || |||||||||||||||||    
T  15028285 gcacaaagacgataaaccaaaataaatagagtcgcgctagacgatgaaatcgaaaaaacaaacgaaagaagactgaaaatatgtgaaaatc 15028375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 34416736 - 34416832
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| | |||||| |||||||| ||||||||| ||  ||||| ||||||||||| ||||||||||||    
T  34416736 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaagacgacgaaatcacaaaaacaaacaaaaaaaaactgaaaatatgtg-aaatcacttatt 34416832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 44150028 - 44150132
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattttgctaatagagaa 121  Q
    |||||||||||||| ||| |||||||||| | ||||||| |||||| || ||| ||||||  |||||||||| ||||||||||||||  |||||||||||    
T  44150028 aaatcaaaataaactaagccgtgctagacaacgaaatca-caaaaccaaagaaagaaaactaaaaatatgtgaaaaatcacttatttaactaatagagaa 44150126  T
Q  122 ataaaa 127  Q
    | ||||    
T  44150127 agaaaa 44150132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12704834 - 12704737
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| |  ||||||  ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  12704834 gcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 12704737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 13740634 - 13740731
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| |||||||||||| |  ||| || |||||||| |||||||||||| |||||| |||||||| || ||||||||||||    
T  13740634 gcacaaagacggaaaatcaaaacaaacaaagtcgttcggagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatatg-aaatcacttatt 13740731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31908790 - 31908887
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| | | ||||| |||||||  |||||||||||| |||||| ||||||||||| ||||||||||||    
T  31908790 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcagaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 31908887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38535279 - 38535376
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  |||| |||||||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  38535279 gcacaaagacgggaaataaaaataaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 38535376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 40039289 - 40039335
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcac 62  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  40039289 agacggaaaatcaaaataaacaaaatcgtgctagacgatgaaatcac 40039335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 20598623 - 20598703
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcact 103  Q
    ||||||||||||| |||||||||| ||||||| |||| ||| |||||||||| |  ||||| |||||||||||| |||||||    
T  20598623 aaaatcaaaataa-caaagtcgtggtagacgacgaaaccacaaaaacaaacgtaataaaactgaaaatatgtgacaatcact 20598703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 27095839 - 27095755
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| ||||||||  |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  27095839 aaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 27095755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 32015357 - 32015273
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||||| ||||| ||| || | |||||| |||||||| |||||||| ||| |||||| ||||||||||| |||||||||||||    
T  32015357 aaatcaaaacaaacagagttgttcgagacgacgaaatcacaaaaacaaatgaatgaaaacagaaaatatgtg-aaatcacttattt 32015273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 9978643 - 9978731
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  9978643 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 9978731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 20561106 - 20561194
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  20561106 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 20561194  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7072922 - 7073009
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaa 96  Q
    ||||| |||||  ||||||||| ||||| |||||| |  ||||||||||||||| |||||||||||| |||||| |||||| ||||||    
T  7072922 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaa 7073009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 10287019 - 10287077
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  10287019 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 10287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 27666344 - 27666270
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa 98  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||||| |||||| |||| | |||||||| ||||||    
T  27666344 aaatcaaaataaacaaaatcgtgttagacgataaaatca-caaaaccaacgaaagaaagctgaaaatatatgaaaa 27666270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 28231110 - 28231168
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| |||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  28231110 agacgatggaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 28231168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 6431402 - 6431460
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||||| ||||||||| || |||||| ||||||||||| |||||||||||||    
T  6431402 acgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtggaaatcacttattt 6431460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 25067999 - 25067902
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||| ||||||| |||||| ||||||||||| ||||||||||||    
T  25067999 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaagaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 25067902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 27665752 - 27665648
Alignment:
Q  21 aaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagaga 120  Q
    |||||||||||||| |||||||||| |||||||  ||||||| ||||| |||||| |||    |||| ||||||||||| ||||||||  |||| |||||    
T  27665752 aaaaatcaaaataa-caaagtcgtgttagacgacaaaatcac-aaaaccaacgaaagaatgttgaaagtatgtgaaaataacttatttaactaaaagaga 27665655  T
Q  121 aataaaa 127  Q
    |||||||    
T  27665654 aataaaa 27665648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 38450384 - 38450286
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| |||||| |||||||||||||||||||| ||||||| ||  |||| || |||  ||  ||| || ||| |||||||||||||||||| ||||||    
T  38450384 gcacaaagacgataaatcaaaataaacaaagtcttgctagatgacaaaattacaaaagtaattgaaagagaactgaaaatatgtgaaaatcatttattt 38450286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 7582181 - 7582261
Alignment:
Q  124 aaaacaatctcaaggggtaattttgggtcaaagtttacc-taaatcaccaatttttggtagatcaagaagaagaaaagttgt 204  Q
    ||||||||  ||||||||||||| | |||||| || ||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  7582181 aaaacaattccaaggggtaattt-gtgtcaaaattgaccctaaatcacccattttcggtaggtcaagaagaagaaaagttgt 7582261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 28261875 - 28261959
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| |||||||||| |||||||| ||||    
T  28261875 aaatcaaaagaaacagagtcgttcagagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-aaaatcacatatt 28261959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 12891093 - 12891181
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||  ||||||||||||||    
T  12891093 gcacaaagacgggaaatcaaaacaaacagagtcgttccgagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaa 12891181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 15261405 - 15261504
Alignment:
Q  28 aaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa-tcacttattttgctaatagagaaataaa 126  Q
    ||||||| ||| |||||||||||| | |||||||| ||| ||| |||| |||||| |||| ||||| |||| |||||||||| ||||| ||||||| |||    
T  15261405 aaaataatcaacgtcgtgctagacaacgaaatcacaaaatcaa-cgaaagaaaactgaaattatgtaaaaaatcacttatttagctaaaagagaaagaaa 15261503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 17116415 - 17116475
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||| ||||||||  ||||||||||| ||| || |||||||||||||||||||| ||||    
T  17116415 agacgacgaaatcacataaacaaacgaaagaagactgaaaatatgtgaaaatcactaattt 17116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 32314589 - 32314501
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagt-cgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||| ||||||||| ||||| ||| |||   ||||||  ||||||| |||||||||||| |||||| ||||||||||||||    
T  32314589 gcacaaagacgagaaatcaaaacaaacagagttcgtcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 32314501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 41797741 - 41797653
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| ||||| |||||| ||| ||||| |||||||| |||||||||||| ||||||  | |||||||||||    
T  41797741 gcacaaagacgggaaatcaaaacaaacagagtcgttctaagacgacgaaatcacaaaaacaaacgaaagaaaacatataatatgtgaaa 41797653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 33012185 - 33012127
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  33012185 agacgacgaaatcacaaaaacaaacgaaacaaaactgaaaatatgtg-aaatcacttatt 33012127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 43474141 - 43474199
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| |||||| |||| ||||||||||||    
T  43474141 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtg-aaatcacttatt 43474199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 17767566 - 17767624
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||||| ||| |||| ||| |||||| ||||||||||| |||||||||||||    
T  17767566 acgacgaaatcacaaaatcaaatgaaagaaaactgaaaatatgtggaaatcacttattt 17767624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35333652 - 35333555
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  | |||| |||||||| |||| ||||||| |||||| ||||||||||| ||||||||||||    
T  35333652 gcacaaagacgggaaatcaaaacaaacagagtcgttcagaaacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtg-aaatcacttatt 35333555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 13548874 - 13548986
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    ||||| |||||| ||||||||||||| ||||| |||||||| || ||| ||| |||||| ||| || ||||   ||||||||||| ||||| ||||||||    
T  13548874 gcacaaagacgagaaatcaaaataaataaagttgtgctagatgacgaattca-caaaaccaacaaaagaaaggtgaaaatatgtgaaaaattacttattt 13548972  T
Q  109 tgctaatagagaaa 122  Q
      |||| |||||||    
T  13548973 aactaaaagagaaa 13548986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 4604291 - 4604378
Alignment:
Q  20 gaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||||||| ||||| |||| | |  |||||| |||||||| ||||||| |||| |||| | ||||||||||| ||||||||||||    
T  4604291 gaaaaatcaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaatcgaaagaaagcagaaaatatgtg-aaatcacttatt 4604378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 4739476 - 4739388
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||| ||||||||| ||||| |||| | |  |||||| |||||||| |||||||||| |  ||||| ||||||||||||||    
T  4739476 gcacaaagacgagaaatcaaaacaaacagagtcattcagagacgacgaaatcacaaaaacaaacggaaaaaaacagaaaatatgtgaaa 4739388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5754435 - 5754347
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||| ||||| ||||| |||||| | ||||||| |||||||| |||||||| ||| ||||||  |||||||||||||    
T  5754435 gcacaaagacgggaaaacaaaacaaacagagtcgttcatagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaa 5754347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 31801213 - 31801292
Alignment:
Q  18 acgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| | ||||||| || |||||| ||||||||||||||    
T  31801213 acgaaaaatcaaaataaataaagtcgtgctagacgacgaaatcacaacaacaaacaaaagaaaactgaaaatatgtgaaa 31801292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 9044068 - 9044171
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaa 122  Q
    ||||||||||| |||||||| ||||| |||  |||||||| |||||||| |||  ||||| |||||||||||||||||||||| |||||||| |||||||    
T  9044068 aaatcaaaatagacaaagtcatgctaaacggcgaaatcacaaaaacaaatgaataaaaactgaaaatatgtgaaaatcactta-tttgctaaaagagaaa 9044166  T
Q  123 taaaa 127  Q
     ||||    
T  9044167 caaaa 9044171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 8508288 - 8508191
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| |||||| ||||||||||| ||||||||||| ||||||| |||||||| ||||||| |||| |||||   |||||||||||||||  |||||||    
T  8508288 cacaaagacgagaaatcaaaatacacaaagtcgtgttagacgacgaaatcacaaaaacaatcgaaagaaaattaaaaatatgtgaaaatatcttattt 8508191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 8978714 - 8978808
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcactt 104  Q
    ||||| ||||||||||  |||||||||||||||||||||||||| |||||||| |||| ||  |||  ||||   || |||||||||||||||||    
T  8978714 gcacaaagacgaaaaactaaaataaacaaagtcgtgctagacgacgaaatcacaaaaataattgaaataaaattaaagatatgtgaaaatcactt 8978808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 12481357 - 12481441
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||||||||||    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  12481357 aaatcaaaacaaacaaagtcgtttagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 12481441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 4393917 - 4393829
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||| ||||||||| ||||| | ||||||  |||| |||||||||| |||||||||||| |||||  ||||||||||||||    
T  4393917 gcacaaagacgagaaatcaaaacaaacagaatcgtgcagagaccatgaaatcacaaaaacaaacgaaagaaaaaagaaaatatgtgaaa 4393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 2304823 - 2304881
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  2304823 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 2304881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 19402795 - 19402870
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||||||    
T  19402795 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 19402870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 15590066 - 15590150
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||    
T  15590066 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 15590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 8693629 - 8693728
Alignment:
Q  8 cagcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttat 106  Q
    ||||||| |||||  ||||||||| |||| ||||||| |  ||||||  |||| || |||||||||||| |||||| ||||||||||| |||||||||||    
T  8693629 cagcacaaagacgggaaatcaaaacaaacgaagtcgttcagagacgacaaaatgacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttat 8693727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 15470211 - 15470307
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    ||||| |||||  |||||||||||||||||| | || ||||||||||||||||  ||||||||||| ||||   |||||||| || ||||||||||||||    
T  15470211 gcacaaagacgtgaaatcaaaataaacaaag-catgttagacgatgaaatcac--aaacaaacgaaagaaatttgaaaatatttgaaaaatcacttattt 15470307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35038841 - 35038748
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||| |||||||||||||||||  ||||||   |||||| |||||||||     ||||| |||||||||||||||||| |||||    
T  35038841 gcacaaagacggaaaatctaaataaacaaagtcgtgtgagacgagagaatcactaaaacaaac----aaaaactgaaaatatgtgaaaatcatttatt 35038748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 29284899 - 29284800
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| |||| ||||||||||| ||||||||||||||  |||||| |||||||| ||||||||  ||   | |  |||||| ||||||||||||||||||    
T  29284899 gcacaaagacaaaaaatcaaaacaaacaaagtcgtgcaaagacgacgaaatcacaaaaacaaataaaaatatattgaaaatgtgtgaaaatcacttattt 29284800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 4921855 - 4921952
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||| | ||||||||  ||||||  ||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  4921855 gcacaaagacgggaaatcaaaacaaatagagtcgtgcagagacgacaaaatcacaaaaacaaacgaaataaaactgaaaatatgtg-aaatcacttatt 4921952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 2488284 - 2488188
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| ||||| |||||||||| ||||| ||||||||  |||| | ||||| || |||||||||||| |||||  ||||||| ||| ||||||||||||    
T  2488284 cacaaagacggaaaatcaaaacaaacatagtcgtgcagagacaacgaaattac-aaaacaaacgaaagaaaaatgaaaatacgtggaaatcacttatt 2488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 21507795 - 21507879
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||||||||||    ||||||  ||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  21507795 aaatcaaaacaaacaaagtcgtttagagacgacaaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 21507879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 23654384 - 23654300
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| ||||||||||||  |||||  |||||||||| ||||||||||||    
T  23654384 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaataaaacaaaaaatatgtg-aaatcacttatt 23654300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6296223 - 6296311
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| || ||||||||| |  |||||| |||||||| |||||||||||| ||||   ||||||||||||||    
T  6296223 gcacaaagacgggaaatcaaaacaagcaaagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaa 6296311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6303033 - 6303121
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||| |||||  ||||||||| || ||||||||| |  |||||| |||||||| |||||||||||| ||||   ||||||||||||||    
T  6303033 gcacaaagacgggaaatcaaaacaagcaaagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaa 6303121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 15175957 - 15175861
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    ||||| |||||  |||||||||||||||||| | || ||||||| ||||||||  ||||||||||| ||||   |||||||| || ||||||||||||||    
T  15175957 gcacaaagacgtgaaatcaaaataaacaaag-catgttagacgacgaaatcac--aaacaaacgaaagaaatttgaaaatatttgaaaaatcacttattt 15175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 374416 - 374317
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaatagagaaa 122  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||| ||  ||||| ||||||| |||||||||| ||||||  |||| |||||||    
T  374416 aaatcaaaataaacaaagtcttgctagacaatgaaatcacaaaaacaaacaaaataaaactgaaaatacgtgaaaatcatttatttaactaaaagagaaa 374317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 26240663 - 26240747
Alignment:
Q  20 gaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcactt 104  Q
    |||||||||||||||||||||||||| | ||||| |||||||| | ||||||  || |||||| |||||||||||||||||||||    
T  26240663 gaaaaatcaaaataaacaaagtcgtgttggacgacgaaatcacaataacaaataaaagaaaactgaaaatatgtgaaaatcactt 26240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 14535045 - 14534959
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaa 96  Q
    ||||| |||||  |||||||||||||||| | |||||||||| | |||||||| |||||||||||| |||||| |||||||||||||    
T  14535045 gcacaaagacgggaaatcaaaataaacaatgacgtgctagacaaagaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa 14534959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 25487755 - 25487656
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||||||| |||||||||| ||  |||||||| | | ||||| |||||||| |||||||||||| ||| |  |||||||||||||||||||||||||    
T  25487755 gcacagagacggaaaatcaaaacaagtaaagtcgtacaaagacgacgaaatcacgaaaacaaacgaaagaacaatgaaaatatgtgaaaatcacttattt 25487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 17331475 - 17331378
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  17331475 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 17331378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 27241211 - 27241114
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  |||||||||||||||| ||||| | | ||||| ||||| || |||||||||||| |||||| ||||||||||| ||||||||||||    
T  27241211 gcacaaagacgggaaatcaaaataaacaaggtcgttcaaagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 27241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 28040776 - 28040679
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| ||||| |||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  28040776 gcacaaagacggaaaattaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 28040679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 33164442 - 33164539
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  33164442 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 33164539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 39179815 - 39179899
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  39179815 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 39179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 6635385 - 6635300
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||||| ||||| |||||| |  |||||| |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||    
T  6635385 aaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtg-aaatcacttatt 6635300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12891823 - 12891726
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||| | ||||| ||||||||  |||| | |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  12891823 gcacaaagacgtgaaatcaatacaaacagagtcgtgcagagacaacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 12891726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 17096213 - 17096310
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| ||||| |||||| |  ||||||  ||||||| |||||||||||| | |||| ||||||||||| ||||||||||||    
T  17096213 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtg-aaatcacttatt 17096310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 34431207 - 34431110
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| | | ||||| |||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||    
T  34431207 gcacaaagacgggaaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaatcaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 34431110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 178091 - 178177
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct---agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| ||||||||    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  178091 aaatcaaaacaaacagagtcgtgcgcagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 178177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 29097923 - 29097839
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| | | ||||| |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||    
T  29097923 aaatcaaaacaaacagagtcgttcaaagacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtg-aaatcacttatt 29097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 17523510 - 17523641
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattttgctaatagagaa 121  Q
    |||| |||||||| ||||| || |||||||| |||||||| ||||| |||||| |||| | | ||||||||| ||||||| ||||||  |||| ||||||    
T  17523510 aaattaaaataaataaagttgtactagacgacgaaatcac-aaaaccaacgaaagaaagctgtaaatatgtgaaaaatcatttatttaactaaaagagaa 17523608  T
Q  122 a-taaaacaatctcaaggggtaattttgggtca 153  Q
    |  ||||||||   || ||||||||||||||||    
T  17523609 agaaaaacaattcgaatgggtaattttgggtca 17523641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 3740465 - 3740407
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| ||||||||  ||||||||||| |||||| ||||||||||| ||||||||||||    
T  3740465 agacgacgaaatcacacaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 3740407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 6281152 - 6281094
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||  |||||||||| |||||||||||||    
T  6281152 agacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgt-aaaatcacttatt 6281094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 17687339 - 17687264
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||||||| ||||| ||||||||  |||| | |||||||| ||||||||| || |||||| ||||||||||||||    
T  17687339 aaatcaaaagaaacagagtcgtgcagagacaacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtgaaa 17687264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 17699661 - 17699603
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||    
T  17699661 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaagatgtg-aaatcacttatt 17699603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 42396487 - 42396574
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||| |||||||||||||||| ||||| | |||| |  |||||| |||||||| |||||||| ||| ||||||  |||||||||||||    
T  42396487 cacaaagacgaaaaatcaaaacaaacagattcgttcagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaa 42396574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 585942 - 585860
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcactt 104  Q
    ||||||||| |||||||||  ||| | ||||| |||||||| ||||||||||||  || |  |||||||||||||||||||||    
T  585942 aaatcaaaacaaacaaagtgatgcaaagacgacgaaatcacaaaaacaaacgaaataagattgaaaatatgtgaaaatcactt 585860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 17522828 - 17522925
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    |||| |||||| |||||||||||||| |||| ||  ||||||| ||||||| |||||| |||||| ||||   | ||||||||| ||||||||||||||    
T  17522828 cacaaagacgagaaatcaaaataaacgaagttgtattagacgacgaaatca-caaaacgaacgaaagaaagttggaaatatgtgaaaaatcacttattt 17522925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 18653929 - 18653847
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatat 91  Q
    ||||| |||||  ||||||||| ||||| ||||||||  |||||| |||||||| |||||||||||| |||| | ||||||||    
T  18653929 gcacaaagacgggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaatcagaaaatat 18653847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 20483332 - 20483236
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| |||||| ||||||||| ||||| ||| || | | ||||| |||||||| ||||||||| ||  ||||| ||||||||||| ||||||||||||    
T  20483332 cacaaagacgataaatcaaaacaaacagagttgttcaaagacgacgaaatcacaaaaacaaacaaaacaaaacagaaaatatgtg-aaatcacttatt 20483236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 32347729 - 32347785
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| |||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  32347729 acgacgaaatcacaaaaacaaacgaaataaaacagaaaatatgtg-aaatcacttatt 32347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 7150966 - 7150866
Alignment:
Q  8 cagcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttat 106  Q
    ||||||| |||||| ||||||||| ||||| ||| |||  | ||||  ||| |||| |||||||||||||||| || ||||||||||  |||| ||||||    
T  7150966 cagcacaaagacgagaaatcaaaacaaacagagttgtgtaaagacgtcgaattcacaaaaacaaacgaaggaagactgaaaatatgtagaaattacttat 7150867  T
Q  107 t 107  Q
    |    
T  7150866 t 7150866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 26905667 - 26905711
Alignment:
Q  64 aaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||||| ||| || ||||||||||| |||||||||||||    
T  26905667 aaaacaaacgaaagaagactgaaaatatgtggaaatcacttattt 26905711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 12717091 - 12717190
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| |||||| ||||||||| ||| | ||||||||| |||||| |||||||| |||||||||||| |||||| ||||||||||| |||||||||||||    
T  12717091 gcacaaagacgagaaatcaaaacaaatagagtcgtgctgagacgaagaaatcacaaaaacaaacgaaagaaaactgaaaatatgtggaaatcacttattt 12717190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 46829541 - 46829457
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttatt 107  Q
    |||||||||||||||||||||||||||| || |||||| ||||||| |||||| ||||   ||||||||||| |||||||||||||    
T  46829541 aaatcaaaataaacaaagtcgtgctagaggacgaaatc-ccaaaaccaacgaaagaaagatgaaaatatgtgaaaaatcacttatt 46829457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 8517436 - 8517527
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| ||||||||| |||||||||||| |  |||||  |||||||| |||||||||||| |||||| |||||||||| |||||||||||||    
T  8517436 agacgagaaatcaaaacaaacaaagtcgttcagagacggcgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-aaaatcacttatt 8517527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 24825796 - 24825699
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||||| | ||||| |||||||| |||||||||||| |||||  ||||||||||| ||||||||||||    
T  24825796 gcacaaagacgggaaatcaaaacaaacagagtcgtgcaaagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtg-aaatcacttatt 24825699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 25658314 - 25658217
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| |  |||||| |||||||| |||||| ||||| |||||| ||||||||||| ||||||||||||    
T  25658314 gcacaaagacgtgaaatcaaaacaaacaaagtcgttcagagacgacgaaatcacaaaaacatacgaaagaaaacagaaaatatgtg-aaatcacttatt 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 39837742 - 39837645
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| |||||||||||| | | || || |||||||  |||||||||||| |||||| ||||||||||| ||||||||||||    
T  39837742 gcacaaagacggaaaatcaaaacaaacaaagtcgttcaaagatgacgaaatcaaaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 39837645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 44757016 - 44757113
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| |||||||||| |||  |||||| |||||||  |||||||||||| ||||||  |||||||||| ||||||||||||    
T  44757016 gcacaaagacgagaaatcaaaacaaacaaagtcatgcagagacgacgaaatcataaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 44757113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 7060466 - 7060374
Alignment:
Q  15 gagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||| ||||||||| ||||| |||||| | | ||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  7060466 gagacgagaaatcaaaagaaacagagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 7060374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 30202172 - 30202088
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  30202172 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 30202088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 51958492 - 51958399
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccg-aaaatatgtgaaaatcacttattt 108  Q
    ||||| |||||||||||||||||||| |||| |||||| || ||||| |||| |||||||  ||||| | ||||||| | ||||||||||||||    
T  51958492 agacggaaaatcaaaataaacaaagttgtgcgagacgacgagatcacaaaaataaacgaaataaaactgaaaaatatataaaaatcacttattt 51958399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 6882064 - 6882005
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| |||||||||||||    
T  6882064 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattt 6882005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 5814481 - 5814406
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    ||||||||| ||||| ||||||||  |||||| |||||||| |||||||||||| ||||||  |||||||||||||    
T  5814481 aaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaa 5814406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 6911788 - 6911730
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  6911788 agacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 6911730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 29268790 - 29268848
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  29268790 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 29268848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 11210287 - 11210384
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| ||||| |||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||  | ||||||||| ||||||||||||    
T  11210287 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaagagtaaatatgtg-aaatcacttatt 11210384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 22757241 - 22757144
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||||  |||||  |||||||||| ||||||||||||    
T  22757241 gcacaaagacgggaaatcaaaacaaacagagtcgttcatagacgacgaaatcacaaaaacaaacgaaaaaaaacataaaatatgtg-aaatcacttatt 22757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 7083803 - 7083887
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||  ||||||||||| ||||||||||||    
T  7083803 aaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtg-aaatcacttatt 7083887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 26674506 - 26674422
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| |||||||||||| |  ||| || |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  26674506 aaatcaaaacaaacaaagtcgttcagagatgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 26674422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 3159135 - 3159091
Alignment:
Q  64 aaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||||||||| |||| | |||||||||||||||||||||||||    
T  3159135 aaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttattt 3159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 24789321 - 24789250
Alignment:
Q  26 tcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa 98  Q
    |||||||||||||||||||| |||||||  |||| | |||||| ||||||  ||||| |||||||||||||||    
T  24789321 tcaaaataaacaaagtcgtgatagacgacaaaatta-caaaaccaacgaaaaaaaactgaaaatatgtgaaaa 24789250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 24818938 - 24819009
Alignment:
Q  26 tcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa 98  Q
    |||||||||||||||||||| |||||||  |||| | |||||| ||||||  ||||| |||||||||||||||    
T  24818938 tcaaaataaacaaagtcgtgatagacgacaaaatta-caaaaccaacgaaaaaaaactgaaaatatgtgaaaa 24819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 31932409 - 31932361
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaa 58  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||| ||||    
T  31932409 gcacaaagacggaaaatcaaaataaacaaagtcgtgctggacgacgaaa 31932361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 50801350 - 50801267
Alignment:
Q  24 aatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| ||||| |||||| |  |||||| |||||||| |||| ||||||| |||||| ||||||||||| ||||||||||||    
T  50801350 aatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtg-aaatcacttatt 50801267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 626523 - 626610
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaa 96  Q
    ||||| |||||| ||||||||| || || |||||| |  ||| || |||||||| |||||||||||| |||||| |||||||||||||    
T  626523 gcacaaagacgagaaatcaaaacaatcagagtcgttcacagaggacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaa 626610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 26742484 - 26742534
Alignment:
Q  56 aaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  26742484 aaatcacgaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 26742534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 43244402 - 43244452
Alignment:
Q  56 aaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||| |||||||||||| ||||| |||||||||||| ||||||||||||    
T  43244402 aaatcacaaaaacaaacgaaagaaaatcgaaaatatgtg-aaatcacttatt 43244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 45351083 - 45351141
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  45351083 agacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtg-aaatcacttatt 45351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 45360562 - 45360620
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||||||||||||  ||||| ||||||||||| ||||||||||||    
T  45360562 agacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtg-aaatcacttatt 45360620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 24611773 - 24611870
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||||||||||| ||||| |||||| |  |||||  |||||||| ||| ||||||||  ||||  ||||||||||| ||||||||||||    
T  24611773 gcacaaagacgaaaaatcaaaacaaacagagtcgttcagagacgtcgaaatcacaaaagcaaacgaaaaaaaatagaaaatatgtg-aaatcacttatt 24611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38944122 - 38944218
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| ||||| | |||||||||| ||||||||||||    
T  38944122 gcacaaagacgggaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaa-caaaaatatgtg-aaatcacttatt 38944218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 27090870 - 27090774
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| ||||| |||||||||| ||||| ||||||||  |||| | ||||| || |||||||||||| |||||  ||||||| ||| ||||||||||||    
T  27090870 cacaaagacggaaaatcaaaacaaacatagtcgtgcagagacaacgaaattac-aaaacaaacgaaagaaaaatgaaaatacgtggaaatcacttatt 27090774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 31994175 - 31994111
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaa 75  Q
    ||||| ||||| ||||| |||||||||||||| || |||||||| ||||||| |||||| ||||||    
T  31994175 gcacaaagacggaaaataaaaataaacaaagttgtactagacgacgaaatca-caaaactaacgaa 31994111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 39990162 - 39990247
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||||||||||||| || |||||||| | || ||||| |||||||||||| |||||| ||||||||||||||||||| |||||    
T  39990162 aaatcaaaataaacaaaatcatgctagacaacgatatcacgaaaacaaacgaaagaaaactgaaaatatgtgaaaatcacctattt 39990247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 43847204 - 43847120
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43847204 aaatcaaaataaacagagtcgttcagagacgacgaaatcaccaaaacaaacgaaggaaaacagaaaatatgtg-aaatcacttatt 43847120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 10094588 - 10094491
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  10094588 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 10094491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 14811367 - 14811270
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    |||| ||||| |||||||||||||||||||||||  ||||||| ||||||| |||||| |||||| |||| | | ||||||||| ||||||||||||||    
T  14811367 cacaaagacggaaaatcaaaataaacaaagtcgtattagacgacgaaatca-caaaacgaacgaaagaaagctggaaatatgtgaaaaatcacttattt 14811270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 15258362 - 15258265
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattt 108  Q
    |||| ||||| |||||||||||||||||||||||  ||||||| ||||||| |||||| |||||| |||| | | ||||||||| ||||||||||||||    
T  15258362 cacaaagacggaaaatcaaaataaacaaagtcgtattagacgacgaaatca-caaaacgaacgaaagaaagctggaaatatgtgaaaaatcacttattt 15258265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 45457530 - 45457627
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| |  ||||||||||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  45457530 gcacaaagacgggaaatcaaaacaaacaaagtcgttcagagacgatgaaatcacgaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 45457627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 26161115 - 26161039
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||||||| ||||| |||||| |  ||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  26161115 aaaatcaaaacaaacagagtcgttcagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 26161039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 27705050 - 27705161
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattttgctaat 115  Q
    ||||||||||||||||||| |||||||| |  ||||||  ||||||| ||| |||||||| || ||   ||||||| ||||||||||||||||  ||||     
T  27705050 agacgaaaaatcaaaataagcaaagtcgcgtgagacgacaaaatcacaaaatcaaacgaaagagaataaaaaatatatgaaaatcacttatttgactaaa 27705149  T
Q  116 agagaaataaaa 127  Q
    ||||||| ||||    
T  27705150 agagaaagaaaa 27705161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 1281111 - 1281208
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  1281111 gcacaaagacgagaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 1281208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 42603743 - 42603840
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| ||||||   ||||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  42603743 gcacaaagacgggaaatcaaaacaaacagagtcgtttatagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 42603840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 43256532 - 43256641
Alignment:
Q  18 acgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaa-tatgtgaaaatcacttattttgctaata 116  Q
    |||| ||||||||||||| |||||| || ||||| |  ||||||| ||||||| ||||| ||||| ||||| ||||||| ||||||||||||  |||| |    
T  43256532 acgagaaatcaaaataaataaagtcatgttagacaacaaaatcacaaaaacaagcgaag-aaaactgaaaaatatgtgataatcacttatttaactaaaa 43256630  T
Q  117 gagaaataaaa 127  Q
    |||||||||||    
T  43256631 gagaaataaaa 43256641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 6646578 - 6646655
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatc 100  Q
    |||||||||||||  |||| ||| ||||| | |||||||| ||| |||||||| |||||| |||||||||||||||||    
T  6646578 aaatcaaaataaattaagttgtgttagactaagaaatcacaaaatcaaacgaaagaaaactgaaaatatgtgaaaatc 6646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 14810737 - 14810633
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa-tcacttattttgctaatagagaa 121  Q
    |||| |||||||| |||||||| |||||||| |||||||| ||||| |||||| |||| | | ||||||||||||| ||||||||||  |||| ||||||    
T  14810737 aaattaaaataaataaagtcgtactagacgacgaaatcac-aaaaccaacgaaagaaagctgtaaatatgtgaaaaatcacttatttaactaaaagagaa 14810639  T
Q  122 ataaaa 127  Q
    | ||||    
T  14810638 agaaaa 14810633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 15257732 - 15257628
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa-tcacttattttgctaatagagaa 121  Q
    |||| |||||||| |||||||| |||||||| |||||||| ||||| |||||| |||| | | ||||||||||||| ||||||||||  |||| ||||||    
T  15257732 aaattaaaataaataaagtcgtactagacgacgaaatcac-aaaaccaacgaaagaaagctgtaaatatgtgaaaaatcacttatttaactaaaagagaa 15257634  T
Q  122 ataaaa 127  Q
    | ||||    
T  15257633 agaaaa 15257628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 24320210 - 24320294
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| ||||||||  ||||||||||||||| ||||||||| || ||||||  |||||||||| ||||||||||||    
T  24320210 aaatcaaaacaaacagagtcgtgcagagacgatgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtg-aaatcacttatt 24320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 5238092 - 5237905
Alignment:
Q  18 acgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtg-aaaatcacttattttgctaata 116  Q
    |||| |||||||||||||||||||||||||| || |  ||||||  ||||| ||| || |||||  ||||||||||| |||||| |||||||  |||| |    
T  5238092 acgagaaatcaaaataaacaaagtcgtgctaaacaacaaaatca-aaaaaccaacaaaagaaaattgaaaatatgtgaaaaatctcttatttaactaaaa 5237994  T
Q  117 gagaaa-taaaacaatctcaaggggtaattttgggtcaaagttta-cctaaatcaccaatttttggtagatcaagaagaagaaaagttg 203  Q
    ||||||  |||||||| |  | |||| |||||| |||||| || | |||||||||||  | |||||| |||||||||||| ||| ||||    
T  5237993 gagaaagcaaaacaatttagaagggtgattttgagtcaaatttgaccctaaatcacccctctttggtggatcaagaagaataaatgttg 5237905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 10574528 - 10574444
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgt 93  Q
    ||||| |||||  ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| |||||| ||||||||||    
T  10574528 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt 10574444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 28664892 - 28664983
Alignment:
Q  16 agacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||||||| ||||| |||||| |  ||||||  ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  28664892 agacggaaaatcaaaacaaacagagtcgttcagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 28664983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 37714611 - 37714559
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaa 75  Q
    ||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  37714611 aaatcaaaataaacatagttgtgctagacgacgaaatcacaaaaacaaacgaa 37714559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 10623946 - 10623847
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatttt 109  Q
    ||||| |||||  ||||||||||||||||||| |||  ||| ||  ||| ||| |||||||||||| ||||||||||| ||||||| || ||||| ||||    
T  10623946 gcacaaagacgggaaatcaaaataaacaaagtagtgtgagatgactaaaccacaaaaacaaacgaaagaaaaccgaaactatgtgagaaacacttttttt 10623847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 15674632 - 15674683
Alignment:
Q  55 gaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  15674632 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 15674683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 36719526 - 36719606
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaat 89  Q
    ||||| ||||| |||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||    
T  36719526 gcacaaagacggaaaatcaaaacaaacagagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaat 36719606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 4621342 - 4621429
Alignment:
Q  11 cacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||| ||||| |||||||||| ||||| ||||||||  ||| |||| |||||| |||||||||||| |||||| ||||| || |||||    
T  4621342 cacaaagacggaaaatcaaaacaaacagagtcgtgcagagatgatggaatcacaaaaacaaacgaaagaaaactgaaaacatatgaaa 4621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 11833127 - 11833069
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| ||| || ||||||||||| ||||||||||||    
T  11833127 agacgacgaaatcacaaaaacaaacgaaagaatacagaaaatatgtg-aaatcacttatt 11833069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 29352345 - 29352294
Alignment:
Q  57 aatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||||| |||||||||||| |||||| || |||||||| |||||||||||||    
T  29352345 aatcacgaaaacaaacgaaagaaaactgagaatatgtggaaatcacttattt 29352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 33476634 - 33476725
Alignment:
Q  18 acgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    |||| ||||||||| ||| |||||||||| | ||||| |||||||  |||||||||| |  ||||  ||||||||||| |||||||||||||    
T  33476634 acgagaaatcaaaacaaaaaaagtcgtgcaaagacgacgaaatcataaaaacaaacggaataaaattgaaaatatgtggaaatcacttattt 33476725  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 35306575 - 35306642
Alignment:
Q  135 aaggggtaattttgggtcaaagtttacctaaatcaccaatttttggtagatcaagaagaagaaaagtt 202  Q
    ||||||||||||||| ||||| ||| |||||||||||||| | | | | ||||||||||| |||||||    
T  35306575 aaggggtaattttggatcaaaattttcctaaatcaccaatctgtaggatatcaagaagaataaaagtt 35306642  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 39532988 - 39533046
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||    
T  39532988 agacgacgaaatcacgaaaacaaacaaaagaaaacagaaaatatgtg-aaatcacttatt 39533046  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 21990768 - 21990712
Alignment:
Q  50 acgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||| |||||||| |||||||||||| |||||| ||| ||||||| ||||||||||||    
T  21990768 acgacgaaatcacaaaaacaaacgaaagaaaacagaatatatgtg-aaatcacttatt 21990712  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 32643120 - 32643071
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaa 97  Q
    |||||| |||||||| ||||||||| || |||||| ||||||||||||||    
T  32643120 agacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaa 32643071  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 32740887 - 32740803
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| || |||||| |||||||| ||||  |||||| ||||||  |||||||||| ||||||||||||    
T  32740887 aaatcaaaacaaacagagtcgttctgagacgacgaaatcacaaaaatcaacgaaagaaaacaaaaaatatgtg-aaatcacttatt 32740803  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 5684466 - 5684415
Alignment:
Q  55 gaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||    
T  5684466 gaaatcacaaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 5684415  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 5709516 - 5709465
Alignment:
Q  55 gaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||    
T  5709516 gaaatcacaaaagcaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 5709465  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 42644777 - 42644726
Alignment:
Q  55 gaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||||| |||||||||||| |||||| || |||||||| ||||||||||||    
T  42644777 gaaatcacaaaaacaaacgaaagaaaacagagaatatgtg-aaatcacttatt 42644726  T

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Target: scaffold1379 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 1060 - 1157
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| ||||||||  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  1060 gcacaaagacgggaaatcaaaacaaacagagtcgtgcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtg-aaatcacttatt 1157  T

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Target: scaffold0886 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 3715 - 3801
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaa 98  Q
    ||||| |||| |||||||||||||||||||||| |||||||||| | ||||| |||||| |||||| |||||| ||||| |||||||||    
T  3715 gcacaaagacaaaaaatcaaaataaacaaagtcatgctagacgacgcaatca-caaaaccaacgaaagaaaactgaaaa-atgtgaaaa 3801  T

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Target: scaffold0294 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 4041 - 4139
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||| |||||  ||||||||| |||||||||||| | | ||||| |||||||| |||||||||||| ||||||  |||||||||| |||||||||||||    
T  4041 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttattt 4139  T

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Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 7098 - 7195
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||| ||||||||| ||||  ||||||   ||||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  7098 gcacaaagacgagaaatcaaaacaaaccgagtcgtttatagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 7195  T

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Target: scaffold0238 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 15666 - 15750
Alignment:
Q  22 aaaatcaaaataaacaaagtcgtgctagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttattt 108  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||||| |||||| |||| | ||||| ||||| |||||||||||||    
T  15666 aaaatcaaaataaacaaagtcatgctagacgacaaaatca-caaaaccaacgaaagaaagctgaaaa-atgtggaaatcacttattt 15750  T

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Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 74311 - 74214
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgcta-gacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| |||||||||||| | | |||||  ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  74311 gcacaaagacgggaaatcaaaacaaacaaagtcgttcaaagacgaaaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 74214  T

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Target: scaffold0312 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 6271 - 6187
Alignment:
Q  23 aaatcaaaataaacaaagtcgtgct-agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||||||| ||||| |||||| |  |||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  6271 aaatcaaaacaaacatagtcgttcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 6187  T

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Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 2392 - 2488
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||||||| | |||||| | ||||| | |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||    
T  2392 gcacatagacgggaaatcaaaataaatagagtcgttcatagacaaagaaatcac-aaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 2488  T

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Target: scaffold1350 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 1682 - 1624
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||||| ||||||  |||||||||| ||||||||||||    
T  1682 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtg-aaatcacttatt 1624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 404271 - 404329
Alignment:
Q  48 agacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    |||||| |||||||| |||||||||| | |||||| ||||||||||| ||||||||||||    
T  404271 agacgacgaaatcacaaaaacaaacggaagaaaacagaaaatatgtg-aaatcacttatt 404329  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 3049 - 2952
Alignment:
Q  10 gcacagagacgaaaaatcaaaataaacaaagtcgtgc-tagacgatgaaatcaccaaaacaaacgaaggaaaaccgaaaatatgtgaaaatcacttatt 107  Q
    ||||| |||||  ||||||||| ||||| |||| | | |||||||  ||||||| |||||||||||| | |||| ||||||||||| ||||||||||||    
T  3049 gcacaaagacgggaaatcaaaacaaacagagtcattcatagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtg-aaatcacttatt 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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